<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
  <BlastOutput_program>blastx</BlastOutput_program>
  <BlastOutput_version>BLASTX 2.10.0+</BlastOutput_version>
  <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
  <BlastOutput_db>/home/smr/dbs/ensembl/release-100/Saccharomyces_cerevisiae.R64-1-1.pep.all.fa</BlastOutput_db>
  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
  <BlastOutput_query-def>PMZ_0051595-RA transcript Note:&quot;Similar to hoxd3 Homeobox protein Hox-D3 (Xenopus laevis)&quot; offset:0 AED:0.09 eAED:0.09 QI:0|0|0.25|0.5|1|1|4|3589|578</BlastOutput_query-def>
  <BlastOutput_query-len>5326</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_matrix>BLOSUM62</Parameters_matrix>
      <Parameters_expect>1e-05</Parameters_expect>
      <Parameters_gap-open>11</Parameters_gap-open>
      <Parameters_gap-extend>1</Parameters_gap-extend>
      <Parameters_filter>L;</Parameters_filter>
    </Parameters>
  </BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
  <Iteration_iter-num>1</Iteration_iter-num>
  <Iteration_query-ID>Query_1</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051595-RA transcript Note:&quot;Similar to hoxd3 Homeobox protein Hox-D3 (Xenopus laevis)&quot; offset:0 AED:0.09 eAED:0.09 QI:0|0|0.25|0.5|1|1|4|3589|578</Iteration_query-def>
  <Iteration_query-len>5326</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>104</Statistics_hsp-len>
      <Statistics_eff-space>3722431557</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>2</Iteration_iter-num>
  <Iteration_query-ID>Query_2</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051596-RA transcript Note:&quot;Similar to Hoxc4 Homeobox protein Hox-C4 (Mus musculus)&quot; offset:50 AED:0.01 eAED:0.01 QI:50|1|1|1|1|1|2|1012|271</Iteration_query-def>
  <Iteration_query-len>1878</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1208647510</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>3</Iteration_iter-num>
  <Iteration_query-ID>Query_3</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051597-RA transcript Note:&quot;Similar to HOXA5 Homeobox protein Hox-A5 (Heterodontus francisci)&quot; offset:142 AED:0.09 eAED:0.09 QI:142|1|1|1|1|1|2|882|308</Iteration_query-def>
  <Iteration_query-len>1951</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1263378718</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>4</Iteration_iter-num>
  <Iteration_query-ID>Query_4</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051598-RA transcript Note:&quot;Similar to hoxc6a Homeobox protein Hox-C6a (Takifugu rubripes)&quot; offset:0 AED:0.79 eAED:0.79 QI:0|0|0|0.5|1|1|2|0|248</Iteration_query-def>
  <Iteration_query-len>747</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>87</Statistics_hsp-len>
      <Statistics_eff-space>379058454</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>5</Iteration_iter-num>
  <Iteration_query-ID>Query_5</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051599-RA transcript Note:&quot;Similar to HOXA7 Homeobox protein Hox-A7 (Gallus gallus)&quot; offset:0 AED:0.79 eAED:0.79 QI:0|0|0|0.5|1|1|2|0|227</Iteration_query-def>
  <Iteration_query-len>684</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YML027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:221406:222563:1 gene:YML027W transcript:YML027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YOX1 description:Homeobox transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; phosphorylated by Cdc28p; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOX1 has a paralog, YHP1, that arose from the whole genome duplication [Source:SGD;Acc:S000004489]</Hit_def>
  <Hit_accession>YML027W</Hit_accession>
  <Hit_len>385</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>43.8986</Hsp_bit-score>
      <Hsp_score>102</Hsp_score>
      <Hsp_evalue>8.59692e-06</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>633</Hsp_query-to>
      <Hsp_hit-from>177</Hsp_hit-from>
      <Hsp_hit-to>234</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>RRRGRQTYSRYQTLELEKEFHFNRYLTRRRRIEIAHALCLTERQIKIWFQNRRMKWKKE</Hsp_qseq>
      <Hsp_hseq>RRKRRRTSSQELSI-LQAEFEKCPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAVKRQ</Hsp_hseq>
      <Hsp_midline>RR+ R+T S+  ++ L+ EF      ++ +RIE+A +  +TE+ ++IWFQN+R   K++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>86</Statistics_hsp-len>
      <Statistics_eff-space>333198314</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>6</Iteration_iter-num>
  <Iteration_query-ID>Query_6</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051600-RA transcript Note:&quot;Similar to HOXD8 Homeobox protein Hox-D8 (Heterodontus francisci)&quot; offset:459 AED:0.08 eAED:0.08 QI:459|1|1|1|1|1|2|1533|272</Iteration_query-def>
  <Iteration_query-len>2811</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YDL106C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:270222:271901:-1 gene:YDL106C transcript:YDL106C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PHO2 description:Homeobox transcription factor; regulatory targets include genes involved in phosphate metabolism; binds cooperatively with Pho4p to the PHO5 promoter; phosphorylation of Pho2p facilitates interaction with Pho4p; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000002264]</Hit_def>
  <Hit_accession>YDL106C</Hit_accession>
  <Hit_len>559</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.521</Hsp_bit-score>
      <Hsp_score>114</Hsp_score>
      <Hsp_evalue>3.97675e-06</Hsp_evalue>
      <Hsp_query-from>1024</Hsp_query-from>
      <Hsp_query-to>1179</Hsp_query-to>
      <Hsp_hit-from>92</Hsp_hit-from>
      <Hsp_hit-to>146</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>LEKEFLFNPYLTRKRRIEVSHALGLTERQVKIWFQNRRMKWKKE---NNKDSFPA</Hsp_qseq>
      <Hsp_hseq>LKRKFEINPTPSLVERKKISDLIGMPEKNVRIWFQNRRAKLRKKQHGSNKDTIPS</Hsp_hseq>
      <Hsp_midline>L+++F  NP  +   R ++S  +G+ E+ V+IWFQNRR K +K+   +NKD+ P+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>1894438946</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>7</Iteration_iter-num>
  <Iteration_query-ID>Query_7</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051601-RA transcript Note:&quot;Similar to HOXA9 Homeobox protein Hox-A9 (Heterodontus francisci)&quot; offset:196 AED:0.10 eAED:0.10 QI:196|1|1|1|1|1|2|147|259</Iteration_query-def>
  <Iteration_query-len>1123</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>654711161</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>8</Iteration_iter-num>
  <Iteration_query-ID>Query_8</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051602-RA transcript Note:&quot;Similar to HOXD11 Homeobox protein Hox-D11 (Homo sapiens)&quot; offset:0 AED:0.43 eAED:0.43 QI:0|0|0|0.5|0|0.5|2|0|84</Iteration_query-def>
  <Iteration_query-len>255</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>56</Statistics_hsp-len>
      <Statistics_eff-space>73789543</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>9</Iteration_iter-num>
  <Iteration_query-ID>Query_9</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051604-RA transcript Note:&quot;Similar to HOXB13 Homeobox protein Hox-B13 (Homo sapiens)&quot; offset:0 AED:0.08 eAED:0.08 QI:0|-1|0|1|-1|1|1|0|100</Iteration_query-def>
  <Iteration_query-len>303</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>71</Statistics_hsp-len>
      <Statistics_eff-space>73364010</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>10</Iteration_iter-num>
  <Iteration_query-ID>Query_10</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051609-RA transcript Note:&quot;Similar to sp9 Transcription factor Sp9 (Danio rerio)&quot; offset:0 AED:0.31 eAED:0.31 QI:0|-1|0|1|-1|1|1|0|427</Iteration_query-def>
  <Iteration_query-len>1284</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YOR113W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:534075:536819:1 gene:YOR113W transcript:YOR113W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AZF1 description:Zinc-finger transcription factor; involved in diauxic shift; in the presence of glucose, activates transcription of genes involved in growth and carbon metabolism; in nonfermentable carbon sources, activates transcription of genes involved in maintenance of cell wall integrity; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005639]</Hit_def>
  <Hit_accession>YOR113W</Hit_accession>
  <Hit_len>914</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>87.0409</Hsp_bit-score>
      <Hsp_score>214</Hsp_score>
      <Hsp_evalue>8.12608e-19</Hsp_evalue>
      <Hsp_query-from>928</Hsp_query-from>
      <Hsp_query-to>1176</Hsp_query-to>
      <Hsp_hit-from>593</Hsp_hit-from>
      <Hsp_hit-to>671</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>37</Hsp_identity>
      <Hsp_positive>57</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>83</Hsp_align-len>
      <Hsp_qseq>HNCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTH</Hsp_qseq>
      <Hsp_hseq>HEC--PYCHRLFSQATHLEVHVRSHIGYKPFVCDY--CGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTH</Hsp_hseq>
      <Hsp_midline>H C  P C +++ + +HL+ H+R H G +PFVC++  CGKRFT+   L+ H R HTGEK ++C +C+K+F R  +L+ H+ TH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>60.077</Hsp_bit-score>
      <Hsp_score>144</Hsp_score>
      <Hsp_evalue>3.94046e-10</Hsp_evalue>
      <Hsp_query-from>949</Hsp_query-from>
      <Hsp_query-to>1164</Hsp_query-to>
      <Hsp_hit-from>626</Hsp_hit-from>
      <Hsp_hit-to>697</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>42</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>74</Hsp_align-len>
      <Hsp_qseq>CGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPV--CNKRFMRSDHLSKH</Hsp_qseq>
      <Hsp_hseq>CGKRFTQGGNLRTHERLHTGEKPYSCD--ICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAH</Hsp_hseq>
      <Hsp_midline>CGK + +  +L+ H R HTGE+P+ C+   C K+F+R   L  HL TH   K F C +  CNK F +  ++  H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YNL027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:579580:581616:1 gene:YNL027W transcript:YNL027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRZ1 description:Transcription factor, activates transcription of stress response genes; nuclear localization is positively regulated by calcineurin-mediated dephosphorylation; rapidly localizes to the nucleus under blue light stress; can be activated in stochastic pulses of nuclear localization in response to calcium [Source:SGD;Acc:S000004972]</Hit_def>
  <Hit_accession>YNL027W</Hit_accession>
  <Hit_len>678</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>80.8777</Hsp_bit-score>
      <Hsp_score>198</Hsp_score>
      <Hsp_evalue>7.50087e-17</Hsp_evalue>
      <Hsp_query-from>916</Hsp_query-from>
      <Hsp_query-to>1182</Hsp_query-to>
      <Hsp_hit-from>563</Hsp_hit-from>
      <Hsp_hit-to>658</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>55</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>98</Hsp_align-len>
      <Hsp_qseq>RKGLHNCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACP---------VCNKRFMRSDHLSKHVKTHSG</Hsp_qseq>
      <Hsp_hseq>RKNPANFACDVCGKKFTRPYNLKSHLRTHTNERPFICS--ICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESG</Hsp_hseq>
      <Hsp_midline>RK   N     CGK + +  +LK+HLR HT ERPF+C+   CGK F R  + +RH   HTG+KR+ C           C K+F RSD L +H KT SG</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>56.225</Hsp_bit-score>
      <Hsp_score>134</Hsp_score>
      <Hsp_evalue>5.52587e-09</Hsp_evalue>
      <Hsp_query-from>1018</Hsp_query-from>
      <Hsp_query-to>1188</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>623</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>FVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHSGGK</Hsp_qseq>
      <Hsp_hseq>FACD--VCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKK</Hsp_hseq>
      <Hsp_midline>F C+   CGK+FTR   L+ HLRTHT E+ F C +C K F R     +H   H+G K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YJL056C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:330431:333073:-1 gene:YJL056C transcript:YJL056C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZAP1 description:Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains [Source:SGD;Acc:S000003592]</Hit_def>
  <Hit_accession>YJL056C</Hit_accession>
  <Hit_len>880</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>76.6406</Hsp_bit-score>
      <Hsp_score>187</Hsp_score>
      <Hsp_evalue>2.25731e-15</Hsp_evalue>
      <Hsp_query-from>949</Hsp_query-from>
      <Hsp_query-to>1176</Hsp_query-to>
      <Hsp_hit-from>773</Hsp_hit-from>
      <Hsp_hit-to>846</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>35</Hsp_identity>
      <Hsp_positive>47</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>76</Hsp_align-len>
      <Hsp_qseq>CGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTH</Hsp_qseq>
      <Hsp_hseq>CKRCFSSEETLVQHTRTHSGEKPYKCH--ICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH</Hsp_hseq>
      <Hsp_midline>C + +     L  H R H+GE+P+ C+   C K+F  S  L+ H+RTHTGEK   C +C KRF  S +LSKH+KTH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>65.4698</Hsp_bit-score>
      <Hsp_score>158</Hsp_score>
      <Hsp_evalue>6.76119e-12</Hsp_evalue>
      <Hsp_query-from>880</Hsp_query-from>
      <Hsp_query-to>1218</Hsp_query-to>
      <Hsp_hit-from>727</Hsp_hit-from>
      <Hsp_hit-to>838</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>40</Hsp_identity>
      <Hsp_positive>62</Hsp_positive>
      <Hsp_gaps>13</Hsp_gaps>
      <Hsp_align-len>119</Hsp_align-len>
      <Hsp_qseq>EAERLGPGASLRRKGLHNCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHSGGK------AGSESDETSN</Hsp_qseq>
      <Hsp_hseq>EAVHLTRGKSEYQCLWHDCH-----RTFPQRQKLIRHLKVHSKYKPYKCKT--CKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSN</Hsp_hseq>
      <Hsp_midline>EA  L  G S  +   H+CH     + + +   L  HL+ H+  +P+ C    C + F+  + L +H RTH+GEK + C +CNK+F  S  L  H++TH+G K       G   +E+SN</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YGL254W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:22304:23203:1 gene:YGL254W transcript:YGL254W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FZF1 description:Transcription factor involved in sulfite metabolism; sole identified regulatory target is SSU1; overexpression suppresses sulfite-sensitivity of many unrelated mutants due to hyperactivation of SSU1, contains five zinc fingers; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003223]</Hit_def>
  <Hit_accession>YGL254W</Hit_accession>
  <Hit_len>299</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>67.0106</Hsp_bit-score>
      <Hsp_score>162</Hsp_score>
      <Hsp_evalue>6.80838e-13</Hsp_evalue>
      <Hsp_query-from>928</Hsp_query-from>
      <Hsp_query-to>1176</Hsp_query-to>
      <Hsp_hit-from>12</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>48</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>83</Hsp_align-len>
      <Hsp_qseq>HNCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTH</Hsp_qseq>
      <Hsp_hseq>YKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>+ C   GC KVY + S L+ H   HT ++P+ C+   CGK+F R   L+ H  TH+  K  AC +C KRF+ +  L +H+ +H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>5.48048e-07</Hsp_evalue>
      <Hsp_query-from>928</Hsp_query-from>
      <Hsp_query-to>1194</Hsp_query-to>
      <Hsp_hit-from>42</Hsp_hit-from>
      <Hsp_hit-to>124</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>46</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>89</Hsp_align-len>
      <Hsp_qseq>HNCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHSGGKAG</Hsp_qseq>
      <Hsp_hseq>YHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACT--LCQKRFVTNQQLRRHLNSHERKSKLASRIDRKH----EGVNANVKAELNGKEG</Hsp_hseq>
      <Hsp_midline>++C  PGCGK + +  HL+ H   H+  +P  C    C KRF  + +L+RHL +H  + + A  +  K     + ++ +VK    GK G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YMR037C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:344403:346517:-1 gene:YMR037C transcript:YMR037C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN2 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; relative distribution to nucleus increases upon DNA replication stress [Source:SGD;Acc:S000004640]</Hit_def>
  <Hit_accession>YMR037C</Hit_accession>
  <Hit_len>704</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>67.3958</Hsp_bit-score>
      <Hsp_score>163</Hsp_score>
      <Hsp_evalue>1.42327e-12</Hsp_evalue>
      <Hsp_query-from>1009</Hsp_query-from>
      <Hsp_query-to>1176</Hsp_query-to>
      <Hsp_hit-from>644</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>ERPFVCNWLFCGKRFTRSDELQRHLRT-HTGEKRFACPVCNKRFMRSDHLSKHVKTH</Hsp_qseq>
      <Hsp_hseq>EKPFHCH--ICPKSFKRSEHLKRHVRSVHSNERPFACHICDKKFSRSDNLSQHIKTH</Hsp_hseq>
      <Hsp_midline>E+PF C+   C K F RS+ L+RH+R+ H+ E+ FAC +C+K+F RSD+LS+H+KTH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>60.4622</Hsp_bit-score>
      <Hsp_score>145</Hsp_score>
      <Hsp_evalue>2.6769e-10</Hsp_evalue>
      <Hsp_query-from>910</Hsp_query-from>
      <Hsp_query-to>1092</Hsp_query-to>
      <Hsp_hit-from>642</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>40</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>62</Hsp_align-len>
      <Hsp_qseq>LRRKGLHNCHIPGCGKVYGKTSHLKAHLR-WHTGERPFVCNWLFCGKRFTRSDELQRHLRTH</Hsp_qseq>
      <Hsp_hseq>LEEKPFH-CHI--CPKSFKRSEHLKRHVRSVHSNERPFACH--ICDKKFSRSDNLSQHIKTH</Hsp_hseq>
      <Hsp_midline>L  K  H CHI  C K + ++ HLK H+R  H+ ERPF C+   C K+F+RSD L +H++TH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YDR146C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:748613:750742:-1 gene:YDR146C transcript:YDR146C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWI5 description:Transcription factor that recruits Mediator and Swi/Snf complexes; activates transcription of genes expressed at the M/G1 phase boundary and in G1 phase; required for expression of the HO gene controlling mating type switching; localization to nucleus occurs during G1 and appears to be regulated by phosphorylation by Cdc28p kinase; SWI5 has a paralog, ACE2, that arose from the whole genome duplication [Source:SGD;Acc:S000002553]</Hit_def>
  <Hit_accession>YDR146C</Hit_accession>
  <Hit_len>709</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>66.6254</Hsp_bit-score>
      <Hsp_score>161</Hsp_score>
      <Hsp_evalue>2.46696e-12</Hsp_evalue>
      <Hsp_query-from>934</Hsp_query-from>
      <Hsp_query-to>1188</Hsp_query-to>
      <Hsp_hit-from>552</Hsp_hit-from>
      <Hsp_hit-to>636</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>51</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>87</Hsp_align-len>
      <Hsp_qseq>CHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTH--SGGK</Hsp_qseq>
      <Hsp_hseq>CLFPGCTKTFKRRYNIRSHIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSHQ-EKAYACP-CGKKFNREDALVVHRSRMICSGGK</Hsp_hseq>
      <Hsp_midline>C  PGC K + +  ++++H++ H  +RP+ C+   C K F R+ +L RH ++H  EK +ACP C K+F R D L  H      SGGK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YLR131C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:404510:406822:-1 gene:YLR131C transcript:YLR131C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACE2 description:Transcription factor required for septum destruction after cytokinesis; phosphorylation by Cbk1p blocks nuclear exit during M/G1 transition, causing localization to daughter cell nuclei, and also increases Ace2p activity; phosphorylation by Cdc28p and Pho85p prevents nuclear import during cell cycle phases other than cytokinesis; part of RAM network that regulates cellular polarity and morphogenesis; ACE2 has a paralog, SWI5, that arose from the whole genome duplication [Source:SGD;Acc:S000004121]</Hit_def>
  <Hit_accession>YLR131C</Hit_accession>
  <Hit_len>770</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>67.0106</Hsp_bit-score>
      <Hsp_score>162</Hsp_score>
      <Hsp_evalue>2.5223e-12</Hsp_evalue>
      <Hsp_query-from>925</Hsp_query-from>
      <Hsp_query-to>1164</Hsp_query-to>
      <Hsp_hit-from>602</Hsp_hit-from>
      <Hsp_hit-to>679</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>47</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>80</Hsp_align-len>
      <Hsp_qseq>LHNCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKH</Hsp_qseq>
      <Hsp_hseq>LFECLYPNCNKVFKRRYNIRSHIQTHLQDRPYSCDFPGCTKAFVRNHDLIRHKISHNA-KKYICP-CGKRFNREDALMVH</Hsp_hseq>
      <Hsp_midline>L  C  P C KV+ +  ++++H++ H  +RP+ C++  C K F R+ +L RH  +H   K++ CP C KRF R D L  H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YGL209W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:95858:97006:1 gene:YGL209W transcript:YGL209W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG2 description:Zinc finger transcriptional repressor; cooperates with Mig1p in glucose-induced gene repression; under low glucose conditions relocalizes to mitochondrion, where it interacts with Ups1p, antagonizes mitochondrial fission factor Dnm1p, indicative of a role in mitochondrial fusion or regulating morphology; regulates filamentous growth in response to glucose depletion; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000003177]</Hit_def>
  <Hit_accession>YGL209W</Hit_accession>
  <Hit_len>382</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>65.0846</Hsp_bit-score>
      <Hsp_score>157</Hsp_score>
      <Hsp_evalue>4.69401e-12</Hsp_evalue>
      <Hsp_query-from>949</Hsp_query-from>
      <Hsp_query-to>1101</Hsp_query-to>
      <Hsp_hit-from>22</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>51</Hsp_align-len>
      <Hsp_qseq>CGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGE</Hsp_qseq>
      <Hsp_hseq>CHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQ</Hsp_hseq>
      <Hsp_midline>C + + +  H K HLR HTGE+P  C +  CGK F+RSDEL+RH+RTHTG+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>56.9954</Hsp_bit-score>
      <Hsp_score>136</Hsp_score>
      <Hsp_evalue>1.82777e-09</Hsp_evalue>
      <Hsp_query-from>1012</Hsp_query-from>
      <Hsp_query-to>1182</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>71</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>38</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>RPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFAC--PVCNKRFMRSDHLSKHVKTHSG</Hsp_qseq>
      <Hsp_hseq>RPFRCDT--CHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTG</Hsp_hseq>
      <Hsp_midline>RPF C+   C + F R +  +RHLRTHTGEK   C  P C K F RSD L +H++TH+G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YER130C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:421115:422446:-1 gene:YER130C transcript:YER130C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COM2 description:Transcription factor that binds IME1 Upstream Activation Signal (UAS)ru; COM2 transcription is regulated by Haa1p, Sok2p and Zap1p transcriptional activators; may bind the IME1 promoter under all growth conditions to negatively regulate its transcription in the absence of a positive regulator that binds more effectively; repressor activity may depend on phosphorylation by PKA; C. albicans homolog (MNL1) plays a role in adaptation to stress [Source:SGD;Acc:S000000932]</Hit_def>
  <Hit_accession>YER130C</Hit_accession>
  <Hit_len>443</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>61.6178</Hsp_bit-score>
      <Hsp_score>148</Hsp_score>
      <Hsp_evalue>8.61913e-11</Hsp_evalue>
      <Hsp_query-from>1036</Hsp_query-from>
      <Hsp_query-to>1182</Hsp_query-to>
      <Hsp_hit-from>393</Hsp_hit-from>
      <Hsp_hit-to>442</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>50</Hsp_align-len>
      <Hsp_qseq>FCGKRFTRSDELQRHLRT-HTGEKRFACPVCNKRFMRSDHLSKHVKTHSG</Hsp_qseq>
      <Hsp_hseq>FCDRRFKRQEHLKRHVRSLHMCEKPFTCHICNKNFSRSDNLNQHVKTHAS</Hsp_hseq>
      <Hsp_midline>FC +RF R + L+RH+R+ H  EK F C +CNK F RSD+L++HVKTH+ </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YKL062W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:323228:325120:1 gene:YKL062W transcript:YKL062W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN4 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes, inducing gene expression; involved in diauxic shift [Source:SGD;Acc:S000001545]</Hit_def>
  <Hit_accession>YKL062W</Hit_accession>
  <Hit_len>630</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>61.6178</Hsp_bit-score>
      <Hsp_score>148</Hsp_score>
      <Hsp_evalue>9.40025e-11</Hsp_evalue>
      <Hsp_query-from>1012</Hsp_query-from>
      <Hsp_query-to>1176</Hsp_query-to>
      <Hsp_hit-from>571</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>40</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>56</Hsp_align-len>
      <Hsp_qseq>RPFVCNWLFCGKRFTRSDELQRHLRT-HTGEKRFACPVCNKRFMRSDHLSKHVKTH</Hsp_qseq>
      <Hsp_hseq>KPFKCKD--CEKAFRRSEHLKRHIRSVHSTERPFACMFCEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline>+PF C    C K F RS+ L+RH+R+ H+ E+ FAC  C K+F RSD+LS+H+KTH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>60.077</Hsp_bit-score>
      <Hsp_score>144</Hsp_score>
      <Hsp_evalue>2.89184e-10</Hsp_evalue>
      <Hsp_query-from>946</Hsp_query-from>
      <Hsp_query-to>1092</Hsp_query-to>
      <Hsp_hit-from>577</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>50</Hsp_align-len>
      <Hsp_qseq>GCGKVYGKTSHLKAHLR-WHTGERPFVCNWLFCGKRFTRSDELQRHLRTH</Hsp_qseq>
      <Hsp_hseq>DCEKAFRRSEHLKRHIRSVHSTERPFAC--MFCEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline> C K + ++ HLK H+R  H+ ERPF C  +FC K+F+RSD L +HL+TH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YGL035C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:431548:433062:-1 gene:YGL035C transcript:YGL035C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG1 description:Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state [Source:SGD;Acc:S000003003]</Hit_def>
  <Hit_accession>YGL035C</Hit_accession>
  <Hit_len>504</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>60.8474</Hsp_bit-score>
      <Hsp_score>146</Hsp_score>
      <Hsp_evalue>1.4141e-10</Hsp_evalue>
      <Hsp_query-from>928</Hsp_query-from>
      <Hsp_query-to>1098</Hsp_query-to>
      <Hsp_hit-from>38</Hsp_hit-from>
      <Hsp_hit-to>92</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>HNCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTG</Hsp_qseq>
      <Hsp_hseq>HAC--PICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRIHTN</Hsp_hseq>
      <Hsp_midline>H C  P C + + +  H   H+R HTGE+P  C++  C KRF+RSDEL RH R HT </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.8322</Hsp_bit-score>
      <Hsp_score>120</Hsp_score>
      <Hsp_evalue>2.21614e-07</Hsp_evalue>
      <Hsp_query-from>1012</Hsp_query-from>
      <Hsp_query-to>1194</Hsp_query-to>
      <Hsp_hit-from>36</Hsp_hit-from>
      <Hsp_hit-to>100</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>8</Hsp_gaps>
      <Hsp_align-len>67</Hsp_align-len>
      <Hsp_qseq>RPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFAC--PVCNKRFMRSDHLSKHVKTHSG----GKAG</Hsp_qseq>
      <Hsp_hseq>RPHACP--ICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRIHTNSHPRGKRG</Hsp_hseq>
      <Hsp_midline>RP  C    C + F R +   RH+R HTGEK  AC  P C KRF RSD L++H + H+     GK G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YER028C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:210692:211876:-1 gene:YER028C transcript:YER028C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG3 description:Transcriptional regulator; partially nonfunctional in S288C strains but has a major role in catabolite repression and ethanol response in some other strains; involved in response to toxic agents; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p, allowing induction of damage response genesenvironment [Source:SGD;Acc:S000000830]</Hit_def>
  <Hit_accession>YER028C</Hit_accession>
  <Hit_len>394</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>57.7658</Hsp_bit-score>
      <Hsp_score>138</Hsp_score>
      <Hsp_evalue>1.2692e-09</Hsp_evalue>
      <Hsp_query-from>934</Hsp_query-from>
      <Hsp_query-to>1095</Hsp_query-to>
      <Hsp_hit-from>19</Hsp_hit-from>
      <Hsp_hit-to>70</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>CHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHT</Hsp_qseq>
      <Hsp_hseq>CEI--CSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHT</Hsp_hseq>
      <Hsp_midline>C I  C + + +  H K H R HTGE+P  C    C K F+RSDEL+RHLRTHT</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>55.8398</Hsp_bit-score>
      <Hsp_score>133</Hsp_score>
      <Hsp_evalue>5.64451e-09</Hsp_evalue>
      <Hsp_query-from>973</Hsp_query-from>
      <Hsp_query-to>1185</Hsp_query-to>
      <Hsp_hit-from>2</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>41</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>73</Hsp_align-len>
      <Hsp_qseq>SHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPV--CNKRFMRSDHLSKHVKTHSGG</Hsp_qseq>
      <Hsp_hseq>NYLRDRFPPDNDQRPFRCE--ICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHTKG</Hsp_hseq>
      <Hsp_midline>++L+        +RPF C    C + F R +  +RH RTHTGEK   C V  C K F RSD L +H++TH+ G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YDR216W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:895035:899006:1 gene:YDR216W transcript:YDR216W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADR1 description:Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization [Source:SGD;Acc:S000002624]</Hit_def>
  <Hit_accession>YDR216W</Hit_accession>
  <Hit_len>1323</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>58.5362</Hsp_bit-score>
      <Hsp_score>140</Hsp_score>
      <Hsp_evalue>1.36243e-09</Hsp_evalue>
      <Hsp_query-from>1012</Hsp_query-from>
      <Hsp_query-to>1182</Hsp_query-to>
      <Hsp_hit-from>102</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>RPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHV-KTHSG</Hsp_qseq>
      <Hsp_hseq>RSFVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>R FVC    C + F R + L+RH R+HT EK + C +CN+ F R D L +H  K HSG</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>47.3654</Hsp_bit-score>
      <Hsp_score>111</Hsp_score>
      <Hsp_evalue>3.96634e-06</Hsp_evalue>
      <Hsp_query-from>949</Hsp_query-from>
      <Hsp_query-to>1098</Hsp_query-to>
      <Hsp_hit-from>109</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>51</Hsp_align-len>
      <Hsp_qseq>CGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHL-RTHTG</Hsp_qseq>
      <Hsp_hseq>CTRAFARQEHLKRHYRSHTNEKPYPCG--LCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>C + + +  HLK H R HT E+P+ C    C + FTR D L RH  + H+G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YPR015C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:590283:591026:-1 gene:YPR015C transcript:YPR015C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative zinc finger transcription factor; binds DNA in sequence-specific manner; overexpression causes a cell cycle delay or arrest [Source:SGD;Acc:S000006219]</Hit_def>
  <Hit_accession>YPR015C</Hit_accession>
  <Hit_len>247</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.225</Hsp_bit-score>
      <Hsp_score>134</Hsp_score>
      <Hsp_evalue>1.81394e-09</Hsp_evalue>
      <Hsp_query-from>943</Hsp_query-from>
      <Hsp_query-to>1113</Hsp_query-to>
      <Hsp_hit-from>188</Hsp_hit-from>
      <Hsp_hit-to>242</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>PGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFA</Hsp_qseq>
      <Hsp_hseq>PICGKVCSRPSTLRTHYLIHTGDTPFKCTWEHCNKSFNVKSNMLRHLRTH--QKKIA</Hsp_hseq>
      <Hsp_midline>P CGKV  + S L+ H   HTG+ PF C W  C K F     + RHLRTH  +K+ A</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YPL230W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:115312:116487:1 gene:YPL230W transcript:YPL230W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:USV1 description:Putative transcription factor containing a C2H2 zinc finger; mutation affects transcriptional regulation of genes involved in growth on non-fermentable carbon sources, response to salt stress and cell wall biosynthesis; USV1 has a paralog, RGM1, that arose from the whole genome duplication [Source:SGD;Acc:S000006151]</Hit_def>
  <Hit_accession>YPL230W</Hit_accession>
  <Hit_len>391</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.0694</Hsp_bit-score>
      <Hsp_score>131</Hsp_score>
      <Hsp_evalue>8.72678e-09</Hsp_evalue>
      <Hsp_query-from>1039</Hsp_query-from>
      <Hsp_query-to>1164</Hsp_query-to>
      <Hsp_hit-from>49</Hsp_hit-from>
      <Hsp_hit-to>90</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>28</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>42</Hsp_align-len>
      <Hsp_qseq>CGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKH</Hsp_qseq>
      <Hsp_hseq>CTMSFTRAEHLARHIRKHTGEKPFQCPACLKFFSRVDNLKQH</Hsp_hseq>
      <Hsp_midline>C   FTR++ L RH+R HTGEK F CP C K F R D+L +H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>1.23584e-06</Hsp_evalue>
      <Hsp_query-from>907</Hsp_query-from>
      <Hsp_query-to>1080</Hsp_query-to>
      <Hsp_hit-from>35</Hsp_hit-from>
      <Hsp_hit-to>90</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>SLRRKGLHNCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRH</Hsp_qseq>
      <Hsp_hseq>SARRKTFKCTGYDGCTMSFTRAEHLARHIRKHTGEKPFQCPA--CLKFFSRVDNLKQH</Hsp_hseq>
      <Hsp_midline>S RRK        GC   + +  HL  H+R HTGE+PF C    C K F+R D L++H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YMR182C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:624532:625167:-1 gene:YMR182C transcript:YMR182C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RGM1 description:Putative zinc finger DNA binding transcription factor; contains two N-terminal C2H2 zinc fingers and C-terminal proline rich domain; overproduction impairs cell growth and induces expression of genes involved in monosaccharide catabolism and aldehyde metabolism; regulates expression of of Y&apos; telomeric elements and subtelomeric COS genes; relocalizes to the cytosol in response to hypoxia; RGM1 has a paralog, USV1, that arose from the whole genome duplication [Source:SGD;Acc:S000004794]</Hit_def>
  <Hit_accession>YMR182C</Hit_accession>
  <Hit_len>211</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>1.15596e-08</Hsp_evalue>
      <Hsp_query-from>877</Hsp_query-from>
      <Hsp_query-to>1080</Hsp_query-to>
      <Hsp_hit-from>4</Hsp_hit-from>
      <Hsp_hit-to>68</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>40</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>69</Hsp_align-len>
      <Hsp_qseq>QEAERLGPGASLRRKGLHNCH-IPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRH</Hsp_qseq>
      <Hsp_hseq>KQPKRNKDNASVKRN--YRCVGYPDCNMSFNRTEHLARHIRKHTGEKPFQCN--ICLKFFSRIDNLRQH</Hsp_hseq>
      <Hsp_midline>++ +R    AS++R   + C   P C   + +T HL  H+R HTGE+PF CN   C K F+R D L++H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>9.1087e-08</Hsp_evalue>
      <Hsp_query-from>1039</Hsp_query-from>
      <Hsp_query-to>1164</Hsp_query-to>
      <Hsp_hit-from>27</Hsp_hit-from>
      <Hsp_hit-to>68</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>27</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>42</Hsp_align-len>
      <Hsp_qseq>CGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKH</Hsp_qseq>
      <Hsp_hseq>CNMSFNRTEHLARHIRKHTGEKPFQCNICLKFFSRIDNLRQH</Hsp_hseq>
      <Hsp_midline>C   F R++ L RH+R HTGEK F C +C K F R D+L +H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>17</Hit_num>
  <Hit_id>YGR067C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:622372:624786:-1 gene:YGR067C transcript:YGR067C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative protein of unknown function; contains a zinc finger motif similar to that of Adr1p [Source:SGD;Acc:S000003299]</Hit_def>
  <Hit_accession>YGR067C</Hit_accession>
  <Hit_len>804</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>54.299</Hsp_bit-score>
      <Hsp_score>129</Hsp_score>
      <Hsp_evalue>2.48135e-08</Hsp_evalue>
      <Hsp_query-from>1006</Hsp_query-from>
      <Hsp_query-to>1173</Hsp_query-to>
      <Hsp_hit-from>4</Hsp_hit-from>
      <Hsp_hit-to>57</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>56</Hsp_align-len>
      <Hsp_qseq>GERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKT</Hsp_qseq>
      <Hsp_hseq>GQKKYICS--FCLKPFSRSEHKIRHERSHAGVKPFQCQVCKHSFVRRDLLQRHIRT</Hsp_hseq>
      <Hsp_midline>G++ ++C+  FC K F+RS+   RH R+H G K F C VC   F+R D L +H++T</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>18</Hit_num>
  <Hit_id>YPR013C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:584632:585585:-1 gene:YPR013C transcript:YPR013C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CMR3 description:Putative zinc finger protein; YPR013C is not an essential gene [Source:SGD;Acc:S000006217]</Hit_def>
  <Hit_accession>YPR013C</Hit_accession>
  <Hit_len>317</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>3.09784e-08</Hsp_evalue>
      <Hsp_query-from>943</Hsp_query-from>
      <Hsp_query-to>1092</Hsp_query-to>
      <Hsp_hit-from>257</Hsp_hit-from>
      <Hsp_hit-to>306</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>28</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>50</Hsp_align-len>
      <Hsp_qseq>PGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTH</Hsp_qseq>
      <Hsp_hseq>PVCGKICSRPSTLKTHYLIHTGDTPFKCTWEGCTKSFNVKSNMLRHLKSH</Hsp_hseq>
      <Hsp_midline>P CGK+  + S LK H   HTG+ PF C W  C K F     + RHL++H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>19</Hit_num>
  <Hit_id>YHL027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VIII:51111:52988:1 gene:YHL027W transcript:YHL027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIM101 description:Cys2His2 zinc-finger transcriptional repressor; involved in alkaline responsive gene repression as part of adaptation to alkaline conditions; involved in cell wall assembly; required for alkaline pH-stimulated haploid invasive growth and sporulation; activated by alkaline-dependent proteolytic processing which results in removal of the C-terminal tail; similar to A. nidulans PacC [Source:SGD;Acc:S000001019]</Hit_def>
  <Hit_accession>YHL027W</Hit_accession>
  <Hit_len>625</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>4.49044e-08</Hsp_evalue>
      <Hsp_query-from>934</Hsp_query-from>
      <Hsp_query-to>1185</Hsp_query-to>
      <Hsp_hit-from>148</Hsp_hit-from>
      <Hsp_hit-to>239</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>42</Hsp_positive>
      <Hsp_gaps>8</Hsp_gaps>
      <Hsp_align-len>92</Hsp_align-len>
      <Hsp_qseq>CHIPGCGKVYGKTSHLKAHL-RWHTGERP-----FVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTH--SGG</Hsp_qseq>
      <Hsp_hseq>CKWDNCGMIFNQPELLYNHLCHDHVGRKSHKNLQLNCHWGDCTTKTEKRDHITSHLRVHVPLKPFGCSTCSKKFKRPQDLKKHLKIHLESGG</Hsp_hseq>
      <Hsp_midline>C    CG ++ +   L  HL   H G +        C+W  C  +  + D +  HLR H   K F C  C+K+F R   L KH+K H  SGG</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>46.2098</Hsp_bit-score>
      <Hsp_score>108</Hsp_score>
      <Hsp_evalue>6.43235e-06</Hsp_evalue>
      <Hsp_query-from>931</Hsp_query-from>
      <Hsp_query-to>1092</Hsp_query-to>
      <Hsp_hit-from>183</Hsp_hit-from>
      <Hsp_hit-to>234</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>30</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>NCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTH</Hsp_qseq>
      <Hsp_hseq>NCHWGDCTTKTEKRDHITSHLRVHVPLKPFGCST--CSKKFKRPQDLKKHLKIH</Hsp_hseq>
      <Hsp_midline>NCH   C     K  H+ +HLR H   +PF C+   C K+F R  +L++HL+ H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>20</Hit_num>
  <Hit_id>YPR186C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:909733:911022:-1 gene:YPR186C transcript:YPR186C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PZF1 description:Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA [Source:SGD;Acc:S000006390]</Hit_def>
  <Hit_accession>YPR186C</Hit_accession>
  <Hit_len>429</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>8.12843e-08</Hsp_evalue>
      <Hsp_query-from>934</Hsp_query-from>
      <Hsp_query-to>1179</Hsp_query-to>
      <Hsp_hit-from>51</Hsp_hit-from>
      <Hsp_hit-to>131</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>83</Hsp_align-len>
      <Hsp_qseq>CHIPGCGKVYGKTSHLKAH-LRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHS</Hsp_qseq>
      <Hsp_hseq>CDYDGCDKAFTRPSILTEHQLSVHQGLRAFQCDK--CAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHT</Hsp_hseq>
      <Hsp_midline>C   GC K + + S L  H L  H G R F C+   C K F +   L+RHL TH+  K F C  C K       L +H  TH+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>4.25366e-07</Hsp_evalue>
      <Hsp_query-from>919</Hsp_query-from>
      <Hsp_query-to>1176</Hsp_query-to>
      <Hsp_hit-from>75</Hsp_hit-from>
      <Hsp_hit-to>185</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>45</Hsp_positive>
      <Hsp_gaps>29</Hsp_gaps>
      <Hsp_align-len>113</Hsp_align-len>
      <Hsp_qseq>KGLHNCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGE---------------------------KRFACPVCNKRFMRSDHLSKHVKTH</Hsp_qseq>
      <Hsp_hseq>QGLRAFQCDKCAKSFVKKSHLERHLYTHSDTKPFQCSY--CGKGVTTRQQLKRHEVTHTKSFICPEEGCNLRFYKHPQLRAHILSVHLHKLTCPHCNKSFQRPYRLRNHISKH</Hsp_hseq>
      <Hsp_midline>+GL       C K + K SHL+ HL  H+  +PF C++  CGK  T   +L+RH  THT                              +  CP CNK F R   L  H+  H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>45.8246</Hsp_bit-score>
      <Hsp_score>107</Hsp_score>
      <Hsp_evalue>9.11467e-06</Hsp_evalue>
      <Hsp_query-from>1012</Hsp_query-from>
      <Hsp_query-to>1188</Hsp_query-to>
      <Hsp_hit-from>47</Hsp_hit-from>
      <Hsp_hit-to>106</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>60</Hsp_align-len>
      <Hsp_qseq>RPFVCNWLFCGKRFTRSDELQRH-LRTHTGEKRFACPVCNKRFMRSDHLSKHVKTHSGGK</Hsp_qseq>
      <Hsp_hseq>KTYFCDYDGCDKAFTRPSILTEHQLSVHQGLRAFQCDKCAKSFVKKSHLERHLYTHSDTK</Hsp_hseq>
      <Hsp_midline>+ + C++  C K FTR   L  H L  H G + F C  C K F++  HL +H+ THS  K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>21</Hit_num>
  <Hit_id>YML081W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:104777:108532:1 gene:YML081W transcript:YML081W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDA9 description:Transcription factor that regulates acetate production; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene; TDA9 has a paralog, RSF2, that arose from the whole genome duplication [Source:SGD;Acc:S000004546]</Hit_def>
  <Hit_accession>YML081W</Hit_accession>
  <Hit_len>1251</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>52.373</Hsp_bit-score>
      <Hsp_score>124</Hsp_score>
      <Hsp_evalue>9.88858e-08</Hsp_evalue>
      <Hsp_query-from>1012</Hsp_query-from>
      <Hsp_query-to>1182</Hsp_query-to>
      <Hsp_hit-from>59</Hsp_hit-from>
      <Hsp_hit-to>114</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>RPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHV-KTHSG</Hsp_qseq>
      <Hsp_hseq>RPFLCH--ICTRGFVRQEHLKRHQRAHTNEKPFLCVFCGRCFARRDLVLRHQHKLHSA</Hsp_hseq>
      <Hsp_midline>RPF+C+   C + F R + L+RH R HT EK F C  C + F R D + +H  K HS </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.8322</Hsp_bit-score>
      <Hsp_score>120</Hsp_score>
      <Hsp_evalue>2.76998e-07</Hsp_evalue>
      <Hsp_query-from>934</Hsp_query-from>
      <Hsp_query-to>1080</Hsp_query-to>
      <Hsp_hit-from>63</Hsp_hit-from>
      <Hsp_hit-to>107</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>49</Hsp_align-len>
      <Hsp_qseq>CHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRH</Hsp_qseq>
      <Hsp_hseq>CHI--CTRGFVRQEHLKRHQRAHTNEKPFLC--VFCGRCFARRDLVLRH</Hsp_hseq>
      <Hsp_midline>CHI  C + + +  HLK H R HT E+PF+C  +FCG+ F R D + RH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>22</Hit_num>
  <Hit_id>YDR043C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:542674:543369:-1 gene:YDR043C transcript:YDR043C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRG1 description:Transcriptional repressor; recruits the Cyc8p-Tup1p complex to promoters; mediates glucose repression and negatively regulates a variety of processes including filamentous growth and alkaline pH response; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000002450]</Hit_def>
  <Hit_accession>YDR043C</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>7.29033e-07</Hsp_evalue>
      <Hsp_query-from>1012</Hsp_query-from>
      <Hsp_query-to>1176</Hsp_query-to>
      <Hsp_hit-from>172</Hsp_hit-from>
      <Hsp_hit-to>226</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>RPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPV--CNKRFMRSDHLSKHVKTH</Hsp_qseq>
      <Hsp_hseq>RKYICK--ICARGFTTSGHLARHNRIHTGEKNHCCPYKGCTQRFSRHDNCLQHYRTH</Hsp_hseq>
      <Hsp_midline>R ++C    C + FT S  L RH R HTGEK   CP   C +RF R D+  +H +TH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>23</Hit_num>
  <Hit_id>YBR066C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:370037:370699:-1 gene:YBR066C transcript:YBR066C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRG2 description:Transcriptional repressor; mediates glucose repression and negatively regulates filamentous growth; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000000270]</Hit_def>
  <Hit_accession>YBR066C</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>47.3654</Hsp_bit-score>
      <Hsp_score>111</Hsp_score>
      <Hsp_evalue>1.31942e-06</Hsp_evalue>
      <Hsp_query-from>928</Hsp_query-from>
      <Hsp_query-to>1107</Hsp_query-to>
      <Hsp_hit-from>153</Hsp_hit-from>
      <Hsp_hit-to>210</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>60</Hsp_align-len>
      <Hsp_qseq>HNCHIPGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKR</Hsp_qseq>
      <Hsp_hseq>HFCKI--CSTGFTTSGHLSRHNRIHTGEKNHICPHEGCGQRFSRHDNCNQHYRTHANKKK</Hsp_hseq>
      <Hsp_midline>H C I  C   +  + HL  H R HTGE+  +C    CG+RF+R D   +H RTH  +K+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>44.669</Hsp_bit-score>
      <Hsp_score>104</Hsp_score>
      <Hsp_evalue>8.0392e-06</Hsp_evalue>
      <Hsp_query-from>1036</Hsp_query-from>
      <Hsp_query-to>1188</Hsp_query-to>
      <Hsp_hit-from>157</Hsp_hit-from>
      <Hsp_hit-to>209</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>30</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>53</Hsp_align-len>
      <Hsp_qseq>FCGKRFTRSDELQRHLRTHTGEKRFACP--VCNKRFMRSDHLSKHVKTHSGGK</Hsp_qseq>
      <Hsp_hseq>ICSTGFTTSGHLSRHNRIHTGEKNHICPHEGCGQRFSRHDNCNQHYRTHANKK</Hsp_hseq>
      <Hsp_midline> C   FT S  L RH R HTGEK   CP   C +RF R D+ ++H +TH+  K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>24</Hit_num>
  <Hit_id>YDR096W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:637139:639823:1 gene:YDR096W transcript:YDR096W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GIS1 description:Histone demethylase and transcription factor; regulates genes during nutrient limitation; activity modulated by proteasome-mediated proteolysis; has JmjC and JmjN domain in N-terminus that interact, promoting stability and proper transcriptional activity; contains two transactivating domains downstream of Jmj domains and a C-terminal DNA binding domain; relocalizes to the cytosol in response to hypoxia; GIS1 has a paralog, RPH1, that arose from the whole genome duplication [Source:SGD;Acc:S000002503]</Hit_def>
  <Hit_accession>YDR096W</Hit_accession>
  <Hit_len>894</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.9802</Hsp_bit-score>
      <Hsp_score>110</Hsp_score>
      <Hsp_evalue>4.74216e-06</Hsp_evalue>
      <Hsp_query-from>1039</Hsp_query-from>
      <Hsp_query-to>1167</Hsp_query-to>
      <Hsp_hit-from>833</Hsp_hit-from>
      <Hsp_hit-to>876</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>19</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>44</Hsp_align-len>
      <Hsp_qseq>CGKRFTRSDELQRHLRT-HTGEKRFACPVCNKRFMRSDHLSKHV</Hsp_qseq>
      <Hsp_hseq>CNRQFSSGHHLTRHKKSVHSGEKPHSCPRCGKRFKRRDHVLQHL</Hsp_hseq>
      <Hsp_midline>C ++F+    L RH ++ H+GEK  +CP C KRF R DH+ +H+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>25</Hit_num>
  <Hit_id>YMR070W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:409154:410626:1 gene:YMR070W transcript:YMR070W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MOT3 description:Transcriptional repressor, activator; role in cellular adjustment to osmotic stress including modulation of mating efficiency; involved in repression of subset of hypoxic genes by Rox1p, repression of several DAN/TIR genes during aerobic growth, ergosterol biosynthetic genes in response to hyperosmotic stress; contributes to recruitment of Tup1p-Cyc8p general repressor to promoters; relocalizes to cytosol under hypoxia; forms [MOT3+] prion under anaerobic conditions [Source:SGD;Acc:S000004674]</Hit_def>
  <Hit_accession>YMR070W</Hit_accession>
  <Hit_len>490</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.595</Hsp_bit-score>
      <Hsp_score>109</Hsp_score>
      <Hsp_evalue>5.70049e-06</Hsp_evalue>
      <Hsp_query-from>1036</Hsp_query-from>
      <Hsp_query-to>1170</Hsp_query-to>
      <Hsp_hit-from>350</Hsp_hit-from>
      <Hsp_hit-to>394</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>28</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>45</Hsp_align-len>
      <Hsp_qseq>FCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVK</Hsp_qseq>
      <Hsp_hseq>FCEKSFKRKSWLKRHLLSHSQQRHFLCPWCLSRQKRKDNLLQHMK</Hsp_hseq>
      <Hsp_midline>FC K F R   L+RHL +H+ ++ F CP C  R  R D+L +H+K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>26</Hit_num>
  <Hit_id>YJR127C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:658917:663059:-1 gene:YJR127C transcript:YJR127C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSF2 description:Zinc-finger protein; involved in transcriptional control of both nuclear and mitochondrial genes, many of which specify products required for glycerol-based growth, respiration, and other functions; RSF2 has a paralog, TDA9, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000003888]</Hit_def>
  <Hit_accession>YJR127C</Hit_accession>
  <Hit_len>1380</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.2098</Hsp_bit-score>
      <Hsp_score>108</Hsp_score>
      <Hsp_evalue>9.45342e-06</Hsp_evalue>
      <Hsp_query-from>943</Hsp_query-from>
      <Hsp_query-to>1128</Hsp_query-to>
      <Hsp_hit-from>154</Hsp_hit-from>
      <Hsp_hit-to>219</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>8</Hsp_gaps>
      <Hsp_align-len>68</Hsp_align-len>
      <Hsp_qseq>PGCGKVYGKTSHLKAHLRWHTGERPFVCNWLFCGKRFTRSDELQRHLR------THTGEKRFACPVCN</Hsp_qseq>
      <Hsp_hseq>PTCTRGFVRQEHLKRHQHSHTREKPYLC--IFCGRCFARRDLVLRHQQKLHAALVGTGDPRRMTPAPN</Hsp_hseq>
      <Hsp_midline>P C + + +  HLK H   HT E+P++C  +FCG+ F R D + RH +        TG+ R   P  N</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>27</Hit_num>
  <Hit_id>YDR253C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:963990:964565:-1 gene:YDR253C transcript:YDR253C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MET32 description:Zinc-finger DNA-binding transcription factor; involved in transcriptional regulation of the methionine biosynthetic genes; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; lack of such a loop for MET31 may account for the differential actions of Met32p and Met31p; MET32 has a paralog, MET31, that arose from the whole genome duplication [Source:SGD;Acc:S000002661]</Hit_def>
  <Hit_accession>YDR253C</Hit_accession>
  <Hit_len>191</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>44.2838</Hsp_bit-score>
      <Hsp_score>103</Hsp_score>
      <Hsp_evalue>9.84103e-06</Hsp_evalue>
      <Hsp_query-from>994</Hsp_query-from>
      <Hsp_query-to>1173</Hsp_query-to>
      <Hsp_hit-from>90</Hsp_hit-from>
      <Hsp_hit-to>147</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>60</Hsp_align-len>
      <Hsp_qseq>RWHTGERPFVCNWLFCGKRFTRSDELQRHLRTHTGEKRFACPVCNKRFMRSDHLSKHVKT</Hsp_qseq>
      <Hsp_hseq>RNSTGEKRFKCAK--CSLEFSRSSDLRRHEKTHFAILPNICPQCGKGFARKDALKRHYDT</Hsp_hseq>
      <Hsp_midline>R  TGE+ F C    C   F+RS +L+RH +TH       CP C K F R D L +H  T</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>92</Statistics_hsp-len>
      <Statistics_eff-space>775107312</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>11</Iteration_iter-num>
  <Iteration_query-ID>Query_11</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051612-RA transcript Note:&quot;Similar to RAPGEF4 Rap guanine nucleotide exchange factor 4 (Homo sapiens)&quot; offset:659 AED:0.20 eAED:0.20 QI:659|0.5|0.57|0.90|0.75|0.76|21|0|773</Iteration_query-def>
  <Iteration_query-len>2981</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YJR138W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:684567:689321:1 gene:YJR138W transcript:YJR138W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IML1 description:GTPase-activating protein (GAP) subunit of the Iml1p/SEACIT complex; SEACIT (Iml1p-Npr2p-Npr3p) is a subcomplex of the SEA complex, a coatomer-related complex that associates dynamically with the vacuole; Iml1p functions in the SEACIT complex as a GAP for the Rag family GTPase Gtr1p (EGOC subunit), resulting in the inhibition of TORC1 signaling in response to amino acid deprivation; the Iml1p/SEACIT complex is required for non-nitrogen-starvation (NNS)-induced autophagy [Source:SGD;Acc:S000003899]</Hit_def>
  <Hit_accession>YJR138W</Hit_accession>
  <Hit_len>1584</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>62.7734</Hsp_bit-score>
      <Hsp_score>151</Hsp_score>
      <Hsp_evalue>2.57297e-10</Hsp_evalue>
      <Hsp_query-from>996</Hsp_query-from>
      <Hsp_query-to>1232</Hsp_query-to>
      <Hsp_hit-from>1184</Hsp_hit-from>
      <Hsp_hit-to>1271</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>51</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>88</Hsp_align-len>
      <Hsp_qseq>RNVILSRASHMIR---------DRKYHLKTYRRCCVGAELVDWLMQQSPSVHARTQAVAMWQVLLEEGVLNHVDQEQNFQDKLLFYRF</Hsp_qseq>
      <Hsp_hseq>RNVELSKLAYQIQRGEDRITLVNRKWHWKKHEKCFVGSEMVNWLIRNFSDIDTREDAIKYGQKVMKEGLFVHVLNKHNFLDGHYFYQF</Hsp_hseq>
      <Hsp_midline>RNV LS+ ++ I+         +RK+H K + +C VG+E+V+WL++    +  R  A+   Q +++EG+  HV  + NF D   FY+F</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YAL024C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:I:101565:105872:-1 gene:YAL024C transcript:YAL024C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LTE1 description:Protein similar to GDP/GTP exchange factors; without detectable GEF activity; required for asymmetric localization of Bfa1p at daughter-directed spindle pole bodies and for mitotic exit at low temperatures [Source:SGD;Acc:S000000022]</Hit_def>
  <Hit_accession>YAL024C</Hit_accession>
  <Hit_len>1435</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>62.3882</Hsp_bit-score>
      <Hsp_score>150</Hsp_score>
      <Hsp_evalue>3.53986e-10</Hsp_evalue>
      <Hsp_query-from>2688</Hsp_query-from>
      <Hsp_query-to>2915</Hsp_query-to>
      <Hsp_hit-from>1242</Hsp_hit-from>
      <Hsp_hit-to>1317</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>45</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>76</Hsp_align-len>
      <Hsp_qseq>TTANLDLFLRRFNELQFWVLTEICLCQQLSKRVQLLRKFIKVAAHCKEYRNLNSFFAIVMGLSNVAVSRLTQTWEL</Hsp_qseq>
      <Hsp_hseq>TLSGIDLAISRFNLTVDWIISEILLTKSSKMKRNVIQRFIHVADHCRTFQNFNTLMEIILALSSSVVQKFTDAWRL</Hsp_hseq>
      <Hsp_midline>T + +DL + RFN    W+++EI L +    +  ++++FI VA HC+ ++N N+   I++ LS+  V + T  W L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YIL033C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:290419:291669:-1 gene:YIL033C transcript:YIL033C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:BCY1 description:Regulatory subunit of the cyclic AMP-dependent protein kinase (PKA); PKA is a component of a signaling pathway that controls a variety of cellular processes, including metabolism, cell cycle, stress response, stationary phase, and sporulation [Source:SGD;Acc:S000001295]</Hit_def>
  <Hit_accession>YIL033C</Hit_accession>
  <Hit_len>416</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>59.3066</Hsp_bit-score>
      <Hsp_score>142</Hsp_score>
      <Hsp_evalue>1.62169e-09</Hsp_evalue>
      <Hsp_query-from>1341</Hsp_query-from>
      <Hsp_query-to>1697</Hsp_query-to>
      <Hsp_hit-from>272</Hsp_hit-from>
      <Hsp_hit-to>382</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>39</Hsp_identity>
      <Hsp_positive>66</Hsp_positive>
      <Hsp_gaps>10</Hsp_gaps>
      <Hsp_align-len>120</Hsp_align-len>
      <Hsp_qseq>ALMRMILRKPISGRSEGLGRGPDDLEIIYEELLH-IKALSHLSITVRRELASVLIFESHAKAGTICKWSRGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIV</Hsp_qseq>
      <Hsp_hseq>ALDRLTFRKILLGSSF-------KKRLMYDDLLKSMPVLKSLTTYDRAKLADALDTKIYQPGETIIR--EGDQGENFYLIEYGAVDVSKKGQGVINKLKDHDYFGEVALLNDLPRQATVT</Hsp_hseq>
      <Hsp_midline>AL R+  RK + G S           ++Y++LL  +  L  L+   R +LA  L  + +    TI +   G++G ++Y+I  G+V+V   G+GV+  L + D FG++AL+ND PR A++ </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>51.6026</Hsp_bit-score>
      <Hsp_score>122</Hsp_score>
      <Hsp_evalue>4.15967e-07</Hsp_evalue>
      <Hsp_query-from>1452</Hsp_query-from>
      <Hsp_query-to>1802</Hsp_query-to>
      <Hsp_hit-from>185</Hsp_hit-from>
      <Hsp_hit-to>297</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>63</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>117</Hsp_align-len>
      <Hsp_qseq>LSHLSITVRRELASVLIFESHAKAGTICKWSRGEEGTSWYIILKGSVNVVIYGKGVVCTLHEGDDFGKLALVNDAPRAASIVLREDNCHFLRVDKEDFNRILRANTVRLKEHGQDVL</Hsp_qseq>
      <Hsp_hseq>FNKLDSDSKRLVINCLEEKSVPKGATIIK--QGDQGDYFYVVEKGTVDFYV-NDNKVNSSGPGSSFGELALMYNSPRAATVVATSD-CLLWALDRLTFRKILLGSSFKKRLMYDDLL</Hsp_hseq>
      <Hsp_midline> + L    +R + + L  +S  K  TI K  +G++G  +Y++ KG+V+  +     V +   G  FG+LAL+ ++PRAA++V   D C    +D+  F +IL  ++ + +    D+L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YLR310C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:752224:756993:-1 gene:YLR310C transcript:YLR310C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDC25 description:Membrane bound guanine nucleotide exchange factor; also known as a GEF or GDP-release factor; indirectly regulates adenylate cyclase through activation of Ras1p and Ras2p by stimulating the exchange of GDP for GTP; required for progression through G1; thermosensitivity of the cdc25-5 mutant is functionally complemented by human RASGRF1 or by a fragment of human SOS1 comprising the CDC25-related catalytic domain [Source:SGD;Acc:S000004301]</Hit_def>
  <Hit_accession>YLR310C</Hit_accession>
  <Hit_len>1589</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.8398</Hsp_bit-score>
      <Hsp_score>133</Hsp_score>
      <Hsp_evalue>3.20782e-08</Hsp_evalue>
      <Hsp_query-from>2691</Hsp_query-from>
      <Hsp_query-to>2975</Hsp_query-to>
      <Hsp_hit-from>1344</Hsp_hit-from>
      <Hsp_hit-to>1438</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>50</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>95</Hsp_align-len>
      <Hsp_qseq>TANLDLFLRRFNELQFWVLTEICLCQQLSKRVQLLRKFIKVAAHCKEYRNLNSFFAIVMGLSNVAVSRLTQTWELSVIDNQRTLSQLSNKLEPRR</Hsp_qseq>
      <Hsp_hseq>SPNITKFIANANTLTNFVSHTIVKQADVKTRSKLTQYFVTVAQHCKELNNFSSMTAIVSALYSSPIYRLKKTWDLVSTESKDLLKNLNNLMDSKR</Hsp_hseq>
      <Hsp_midline>+ N+  F+   N L  +V   I     +  R +L + F+ VA HCKE  N +S  AIV  L +  + RL +TW+L   +++  L  L+N ++ +R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>2021036298</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>12</Iteration_iter-num>
  <Iteration_query-ID>Query_12</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051603-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.38 eAED:0.40 QI:0|0|0|0.5|0|0|2|0|123</Iteration_query-def>
  <Iteration_query-len>372</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>78</Statistics_hsp-len>
      <Statistics_eff-space>110366282</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>13</Iteration_iter-num>
  <Iteration_query-ID>Query_13</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051570-RA transcript Note:&quot;Protein of unknown function&quot; offset:213 AED:0.29 eAED:0.29 QI:213|0.5|0.66|0.66|0.5|0.33|3|0|608</Iteration_query-def>
  <Iteration_query-len>2040</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1331792728</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>14</Iteration_iter-num>
  <Iteration_query-ID>Query_14</Iteration_query-ID>
  <Iteration_query-def>PMZ_0003616-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.66 eAED:0.66 QI:0|-1|0|1|-1|1|1|0|304</Iteration_query-def>
  <Iteration_query-len>915</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>89</Statistics_hsp-len>
      <Statistics_eff-space>502560072</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>15</Iteration_iter-num>
  <Iteration_query-ID>Query_15</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051571-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.29 eAED:0.46 QI:0|0|0|1|1|1|2|0|432</Iteration_query-def>
  <Iteration_query-len>1299</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>92</Statistics_hsp-len>
      <Statistics_eff-space>786641647</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>16</Iteration_iter-num>
  <Iteration_query-ID>Query_16</Iteration_query-ID>
  <Iteration_query-def>PMZ_0003614-RA transcript Note:&quot;Similar to OSBPL11 Oxysterol-binding protein-related protein 11 (Homo sapiens)&quot; offset:224 AED:0.22 eAED:0.22 QI:224|0.4|0.36|1|0.6|0.54|11|0|839</Iteration_query-def>
  <Iteration_query-len>2744</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YHR001W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VIII:106055:107368:1 gene:YHR001W transcript:YHR001W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OSH7 description:Oxysterol-binding protein; part of family with seven members in S. cerevisiae; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; OSH7 has a paralog, OSH6, that arose from the whole genome duplication [Source:SGD;Acc:S000001043]</Hit_def>
  <Hit_accession>YHR001W</Hit_accession>
  <Hit_len>437</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>100.908</Hsp_bit-score>
      <Hsp_score>250</Hsp_score>
      <Hsp_evalue>5.99876e-23</Hsp_evalue>
      <Hsp_query-from>2028</Hsp_query-from>
      <Hsp_query-to>2714</Hsp_query-to>
      <Hsp_hit-from>147</Hsp_hit-from>
      <Hsp_hit-to>383</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>78</Hsp_identity>
      <Hsp_positive>117</Hsp_positive>
      <Hsp_gaps>18</Hsp_gaps>
      <Hsp_align-len>242</Hsp_align-len>
      <Hsp_qseq>RVWFVAEQVSHHPPVSAFYVECAELGMCLNVHLWTKSKFLXXXXXXXXXXEGRLWLQ------EHG--EEYVFTLPSGYARSILTVPW-VELGGKVSITCARTCLAASVNFHTKPFYGGKLHRVTAEVRHVEEGAVLARAQGEWNGLLEFTT----TSGETVIMDTTKMLIIPKHVQPIERQEPMHSRRLWQQVTSALRAGDIASATEHKHKLEEWQRAKERARVQAGTEHVPKYFLREVSG</Hsp_qseq>
      <Hsp_hseq>QAFYIAEQTSHHPPESAYFYMIPESNIRVDGVVVPKSKFLGNSSAAMM--EGLTVLQFLDIKDANGKPEKYTLSQPNVYARGILFGKMRIELGDHMVIMGPK--YQVDIEFKTKGFISGTYDAIEGTIKDYD-GKEYYQISGKWNDIMYIKDLREKSSKKTVLFDTHQHFPLAPKVRPLEEQGEYESRRLWKKVTDALAVRDHEVATEEKFQIENRQRELAKKRAEDGVEFHSKLFRRAEPG</Hsp_hseq>
      <Hsp_midline>+ +++AEQ SHHPP SA++    E  + ++  +  KSKFLG S    M  EG   LQ       +G  E+Y  + P+ YAR IL     +ELG  + I   +      + F TK F  G    +   ++  + G    +  G+WN ++        +S +TV+ DT +   +   V+P+E Q    SRRLW++VT AL   D   ATE K ++E  QR   + R + G E   K F R   G</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>75.485</Hsp_bit-score>
      <Hsp_score>184</Hsp_score>
      <Hsp_evalue>1.21291e-14</Hsp_evalue>
      <Hsp_query-from>1560</Hsp_query-from>
      <Hsp_query-to>1853</Hsp_query-to>
      <Hsp_hit-from>49</Hsp_hit-from>
      <Hsp_hit-to>144</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>37</Hsp_identity>
      <Hsp_positive>59</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>98</Hsp_align-len>
      <Hsp_qseq>SIILHMLSQLKLGMDLTKVVLPTFILECRSLLEMFSDFMAHTDAFLAVAWGQTAEERMCLLLQYYLSSFREGRKGAVAKKPYNPIIGEAFRCSWLVPR</Hsp_qseq>
      <Hsp_hseq>SILLNIISQLKPGCDLSRITLPTFILEKKSMLERITNQLQFPDVLLEAHSNKDGLQRFVKVVAWYLAGWHIGPRA--VKKPLNPILGEHFTAYWDLPN</Hsp_hseq>
      <Hsp_midline>SI+L+++SQLK G DL+++ LPTFILE +S+LE  ++ +   D  L     +   +R   ++ +YL+ +  G +    KKP NPI+GE F   W +P </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YKR003W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:445381:446727:1 gene:YKR003W transcript:YKR003W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:OSH6 description:Member of an oxysterol-binding protein family; family members have overlapping, redundant functions in sterol metabolism and collectively perform a function essential for viability; GFP-fusion protein localizes to the cell periphery; overexpression extends lifespan by promoting vacuolar fusion; OSH6 has a paralog, OSH7, that arose from the whole genome duplication [Source:SGD;Acc:S000001711]</Hit_def>
  <Hit_accession>YKR003W</Hit_accession>
  <Hit_len>448</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>94.7449</Hsp_bit-score>
      <Hsp_score>234</Hsp_score>
      <Hsp_evalue>6.50712e-21</Hsp_evalue>
      <Hsp_query-from>2028</Hsp_query-from>
      <Hsp_query-to>2714</Hsp_query-to>
      <Hsp_hit-from>147</Hsp_hit-from>
      <Hsp_hit-to>383</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>72</Hsp_identity>
      <Hsp_positive>111</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>240</Hsp_align-len>
      <Hsp_qseq>RVWFVAEQVSHHPPVSAFYVECAELGMCLNVHLWTKSKFLXXXXXXXXXXEGRLWLQE------HGEEYVFTLPSGYARSILTVPW-VELGGKVSITCARTCLAASVNFHTKPFYGGKLHRVTAEVRHVEEGAVLARAQGEWNGLLEFTTT----SGETVIMDTTKMLIIPKHVQPIERQEPMHSRRLWQQVTSALRAGDIASATEHKHKLEEWQRAKERARVQAGTEHVPKYFLREVSG</Hsp_qseq>
      <Hsp_hseq>QAYYISEQTSHHPPECAYFYMIPESSIRVDGVVIPKSRFLGNSSAAMMDGSTVLQFLDIKDGNGKPEKYVLTQPNVYVRGILFGKMRIELGDHMIIKSPN--FQADIEFKTKGYVFGTYDAIEGTVKDYD-GNAYYEISGKWNDVMYLKDLKQPRSSPKVFLDTHKESPLRPKVRPLSEQGEYESRKLWKKVTDALAVRNHPVATEEKFQIEDHQRQLAKKRIEDGVEFHPKLFRRSKPG</Hsp_hseq>
      <Hsp_midline>+ ++++EQ SHHPP  A++    E  + ++  +  KS+FLG S    M G   L   +        E+YV T P+ Y R IL     +ELG  + I        A + F TK +  G    +   V+  + G       G+WN ++         S   V +DT K   +   V+P+  Q    SR+LW++VT AL   +   ATE K ++E+ QR   + R++ G E  PK F R   G</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>70.8626</Hsp_bit-score>
      <Hsp_score>172</Hsp_score>
      <Hsp_evalue>3.46781e-13</Hsp_evalue>
      <Hsp_query-from>1557</Hsp_query-from>
      <Hsp_query-to>1850</Hsp_query-to>
      <Hsp_hit-from>48</Hsp_hit-from>
      <Hsp_hit-to>143</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>35</Hsp_identity>
      <Hsp_positive>60</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>98</Hsp_align-len>
      <Hsp_qseq>YSIILHMLSQLKLGMDLTKVVLPTFILECRSLLEMFSDFMAHTDAFLAVAWGQTAEERMCLLLQYYLSSFREGRKGAVAKKPYNPIIGEAFRCSWLVP</Hsp_qseq>
      <Hsp_hseq>HNIILNIISQLRPGCDLTRITLPTFILEKKSMLERVTNQLQFPEFLLQAHSEKDPLKRFLYVMKWYLAGWHIAPKA--VKKPLNPVLGEYFTAYWDLP</Hsp_hseq>
      <Hsp_midline>++IIL+++SQL+ G DLT++ LPTFILE +S+LE  ++ +   +  L     +   +R   ++++YL+ +    K    KKP NP++GE F   W +P</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YOR237W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:781994:783298:1 gene:YOR237W transcript:YOR237W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HES1 description:Protein implicated in the regulation of ergosterol biosynthesis; one of a seven member gene family with a common essential function and non-essential unique functions; similar to human oxysterol binding protein (OSBP); SWAT-GFP and mCherry fusion proteins localize to the bud neck and vacuolar membrane; HES1 has a paralog, KES1, that arose from the whole genome duplication [Source:SGD;Acc:S000005763]</Hit_def>
  <Hit_accession>YOR237W</Hit_accession>
  <Hit_len>434</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>89.7373</Hsp_bit-score>
      <Hsp_score>221</Hsp_score>
      <Hsp_evalue>2.51908e-19</Hsp_evalue>
      <Hsp_query-from>1602</Hsp_query-from>
      <Hsp_query-to>2669</Hsp_query-to>
      <Hsp_hit-from>23</Hsp_hit-from>
      <Hsp_hit-to>353</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>92</Hsp_identity>
      <Hsp_positive>154</Hsp_positive>
      <Hsp_gaps>85</Hsp_gaps>
      <Hsp_align-len>386</Hsp_align-len>
      <Hsp_qseq>DLTKVVLPTFILECRSLLEMFSDFMAHTDAFL--AVAWGQTAEE--------------RMCLLLQYYLSSFRE---GRKGAVA--KKPYNPIIGEAFRCSWLVPRTWVMAKSRKEVSPGSVKNSPGCGTESDYSSGEKPEPRSNVAYRRTRAGGEDAGEDGCYRVWFVAEQVSHHPPVSAFYVECAELGMCLNVHLWTKSKFLXXXXXXXXXXEGRLWLQEHGEEYVFTLPSGYARSILTV-PWVELGGKVSITCARTCLAASVNFHTKPFYGGKLHRVTAEV-----RHVEEGAVLARAQGEWNGLLEFTTTSGETV--IMDTTKMLIIPKHVQPIERQEPMHSRRLWQQVTSALRAGDIASATEHKHKLEEWQRA-KERARVQA</Hsp_qseq>
      <Hsp_hseq>DLSSLSAPPFILSPTSLTEFSQYWAEHPALFLEPSLIDGENYKDHCPFDPNVESKEVAQMLAVVRWFISTLRSQYCSRSESMGSEKKPLNPFLGEVFVGKW--------------------------------KNDEHPEFGETV---------------------LLSEQVSHHPPMTAFSIFNEKNDVSVQGYNQIKTGFTKTLTLTVKPY-GHVILKIKDETYLITTPPLHIEGILVASPFVELGGRSFIQSSNGMLCV-IEFSGRGYFTGKKNSFKARIYRSPQEHSHKENALYLISGQWSGVSTIIKKDSQVSHQFYDSSETPTEHLLVKPIEEQHPLESRRAWKDVAEAIRQGNISMIKKTKEELENKQRALREQERVKG</Hsp_hseq>
      <Hsp_midline>DL+ +  P FIL   SL E    +  H   FL  ++  G+  ++              +M  ++++++S+ R     R  ++   KKP NP +GE F   W                                 + E PE    V                      ++EQVSHHPP++AF +   +  + +  +   K+ F            G + L+   E Y+ T P  +   IL   P+VELGG+  I  +   L   + F  + ++ GK +   A +      H  +   L    G+W+G+        +      D+++       V+PIE Q P+ SRR W+ V  A+R G+I+   + K +LE  QRA +E+ RV+ </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YPL145C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:278395:279699:-1 gene:YPL145C transcript:YPL145C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:KES1 description:One of seven members of the yeast oxysterol binding protein family; involved in negative regulation of Sec14p-dependent Golgi complex secretory functions, peripheral membrane protein that localizes to the Golgi complex; KES1 has a paralog, HES1, that arose from the whole genome duplication [Source:SGD;Acc:S000006066]</Hit_def>
  <Hit_accession>YPL145C</Hit_accession>
  <Hit_len>434</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>79.7221</Hsp_bit-score>
      <Hsp_score>195</Hsp_score>
      <Hsp_evalue>4.4848e-16</Hsp_evalue>
      <Hsp_query-from>1602</Hsp_query-from>
      <Hsp_query-to>2642</Hsp_query-to>
      <Hsp_hit-from>23</Hsp_hit-from>
      <Hsp_hit-to>344</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>87</Hsp_identity>
      <Hsp_positive>142</Hsp_positive>
      <Hsp_gaps>85</Hsp_gaps>
      <Hsp_align-len>377</Hsp_align-len>
      <Hsp_qseq>DLTKVVLPTFILECRSLLEMFSDFMAHTDAFLAVAWGQTAE----------------ERMCLLLQYYLSSFRE---GRKGAVA--KKPYNPIIGEAFRCSWLVPRTWVMAKSRKEVSPGSVKNSPGCGTESDYSSGEKPEPRSNVAYRRTRAGGEDAGEDGCYRVWFVAEQVSHHPPVSAFYVECAELGMCLNVHLWTKSKFLXXXXXXXXXXEGRLWLQEHGEEYVFTLPSGYARSILTV-PWVELGGKVSITCARTCLAASVNFHTKPFYGGKLHRVTAEVRHVEEGA-----VLARAQGEWNG---LLEFTTTSGETVIMDTTKMLIIPKHVQPIERQEPMHSRRLWQQVTSALRAGDIASATEHKHKLEEWQR</Hsp_qseq>
      <Hsp_hseq>DLSSLSAPPFILSPISLTEFSQYWAEHPELFLEPSFINDDNYKEHCLIDPEVESPELARMLAVTKWFISTLKSQYCSRNESLGSEKKPLNPFLGELFVGKW--------------------------------ENKEHPEFGETV---------------------LLSEQVSHHPPVTAFSIFNDKNKVKLQGYNQIKASFTKSLMLTVKQF-GHTMLDIKDESYLVTPPPLHIEGILVASPFVELEGKSYIQSS-TGLLCVIEFSGRGYFSGKKNSFKARIYKDSKDSKDKEKALYTISGQWSGSSKIIKANKKEESRLFYDAARIPAEHLNVKPLEEQHPLESRKAWYDVAGAIKLGDFNLIAKTKTELEETQR</Hsp_hseq>
      <Hsp_midline>DL+ +  P FIL   SL E    +  H + FL  ++                      RM  + ++++S+ +     R  ++   KKP NP +GE F   W                                 + E PE    V                      ++EQVSHHPPV+AF +   +  + L  +   K+ F    +       G   L    E Y+ T P  +   IL   P+VEL GK  I  + T L   + F  + ++ GK +   A +    + +      L    G+W+G   +++        +  D  ++     +V+P+E Q P+ SR+ W  V  A++ GD     + K +LEE QR</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>1842443605</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>17</Iteration_iter-num>
  <Iteration_query-ID>Query_17</Iteration_query-ID>
  <Iteration_query-def>PMZ_0026520-RA transcript Note:&quot;Similar to COL28A1 Collagen alpha-1(XXVIII) chain (Homo sapiens)&quot; offset:0 AED:0.36 eAED:0.36 QI:0|0.42|0.48|0.66|0.5|0.70|27|0|1019</Iteration_query-def>
  <Iteration_query-len>3060</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>2082074307</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>18</Iteration_iter-num>
  <Iteration_query-ID>Query_18</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051572-RA transcript Note:&quot;Similar to Fam117b Protein FAM117B (Mus musculus)&quot; offset:0 AED:0.06 eAED:0.06 QI:0|0.66|0.75|1|0|0|4|1502|287</Iteration_query-def>
  <Iteration_query-len>2366</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>97</Statistics_hsp-len>
      <Statistics_eff-space>1571242097</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>19</Iteration_iter-num>
  <Iteration_query-ID>Query_19</Iteration_query-ID>
  <Iteration_query-def>PMZ_0051575-RA transcript Note:&quot;Similar to sh3bp4 SH3 domain-binding protein 4 (Xenopus tropicalis)&quot; offset:347 AED:0.16 eAED:0.16 QI:347|0.6|0.5|1|0.6|0.5|6|2111|421</Iteration_query-def>
  <Iteration_query-len>3724</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>101</Statistics_hsp-len>
      <Statistics_eff-space>2562112380</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>

