<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
  <BlastOutput_program>blastx</BlastOutput_program>
  <BlastOutput_version>BLASTX 2.10.0+</BlastOutput_version>
  <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
  <BlastOutput_db>/home/smr/dbs/ensembl/release-100/Saccharomyces_cerevisiae.R64-1-1.pep.all.fa</BlastOutput_db>
  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
  <BlastOutput_query-def>PMZ_0052016-RA transcript Note:&quot;Similar to MRAS Ras-related protein M-Ras (Homo sapiens)&quot; offset:381 AED:0.30 eAED:0.30 QI:381|0.83|0.85|1|0.66|0.57|7|0|182</BlastOutput_query-def>
  <BlastOutput_query-len>930</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_matrix>BLOSUM62</Parameters_matrix>
      <Parameters_expect>1e-05</Parameters_expect>
      <Parameters_gap-open>11</Parameters_gap-open>
      <Parameters_gap-extend>1</Parameters_gap-extend>
      <Parameters_filter>L;</Parameters_filter>
    </Parameters>
  </BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
  <Iteration_iter-num>1</Iteration_iter-num>
  <Iteration_query-ID>Query_1</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052016-RA transcript Note:&quot;Similar to MRAS Ras-related protein M-Ras (Homo sapiens)&quot; offset:381 AED:0.30 eAED:0.30 QI:381|0.83|0.85|1|0.66|0.57|7|0|182</Iteration_query-def>
  <Iteration_query-len>930</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YOR101W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:515244:516173:1 gene:YOR101W transcript:YOR101W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAS1 description:GTPase involved in G-protein signaling in adenylate cyclase activation; plays a role in cell proliferation; localized to the plasma membrane; homolog of mammalian RAS proto-oncogenes; relative distribution to the nucleus increases upon DNA replication stress; RAS1 has a paralog, RAS2, that arose from the whole genome duplication [Source:SGD;Acc:S000005627]</Hit_def>
  <Hit_accession>YOR101W</Hit_accession>
  <Hit_len>309</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>177.563</Hsp_bit-score>
      <Hsp_score>449</Hsp_score>
      <Hsp_evalue>2.96696e-54</Hsp_evalue>
      <Hsp_query-from>421</Hsp_query-from>
      <Hsp_query-to>927</Hsp_query-to>
      <Hsp_hit-from>11</Hsp_hit-from>
      <Hsp_hit-to>172</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>97</Hsp_identity>
      <Hsp_positive>127</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>169</Hsp_align-len>
      <Hsp_qseq>YKXXXXXXXXXXKSALTIQFFQKIFVVDYDPTIEDSYIKHTEIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKDRDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAFQELVRVIR</Hsp_qseq>
      <Hsp_hseq>YKIVVVGGGGVGKSALTIQFIQSYFVDEYDPTIEDSYRKQVVIDDKVSILDILDTAGQEEYSAMREQYMRTGEGFLLVYSVTSRNSFDELLSYYQQIQRVKDSDYIPVVVVGNKLDLENERQVSYEDGLRLAKQ------LNAPFLETSAK-QAINVDEAFYSLIRLVR</Hsp_hseq>
      <Hsp_midline>YK+VVVG GGVGKSALTIQF Q  FV +YDPTIEDSY K   ID + +ILD+LDTAGQEE+SAMREQYMRTG+GFL+VYSVT + SF+ +  ++Q I RVKD D  P+++V NK+DL + R++S E G  +A +      +  P++ETSAK   +NVD+AF  L+R++R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YNL098C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:439602:440570:-1 gene:YNL098C transcript:YNL098C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAS2 description:GTP-binding protein; regulates nitrogen starvation response, sporulation, and filamentous growth; farnesylation and palmitoylation required for activity and localization to plasma membrane; homolog of mammalian Ras proto-oncogenes; RAS2 has a paralog, RAS1, that arose from the whole genome duplication [Source:SGD;Acc:S000005042]</Hit_def>
  <Hit_accession>YNL098C</Hit_accession>
  <Hit_len>322</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>172.17</Hsp_bit-score>
      <Hsp_score>435</Hsp_score>
      <Hsp_evalue>5.99262e-52</Hsp_evalue>
      <Hsp_query-from>409</Hsp_query-from>
      <Hsp_query-to>927</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>172</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>95</Hsp_identity>
      <Hsp_positive>126</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>173</Hsp_align-len>
      <Hsp_qseq>NLPTYKXXXXXXXXXXKSALTIQFFQKIFVVDYDPTIEDSYIKHTEIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKDRDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAFQELVRVIR</Hsp_qseq>
      <Hsp_hseq>NIREYKLVVVGGGGVGKSALTIQLTQSHFVDEYDPTIEDSYRKQVVIDDEVSILDILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQDGLNMAKQ------MNAPFLETSAK-QAINVEEAFYTLARLVR</Hsp_hseq>
      <Hsp_midline>N+  YK+VVVG GGVGKSALTIQ  Q  FV +YDPTIEDSY K   ID + +ILD+LDTAGQEE+SAMREQYMR G+GFL+VYS+T K+S + +  ++Q ILRVKD D  P+++V NK DL + +++S + G  MA +      M  P++ETSAK   +NV++AF  L R++R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YGR152C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:794674:795492:-1 gene:YGR152C transcript:YGR152C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSR1 description:GTP-binding protein of the Ras superfamily; required for bud site selection, morphological changes in response to mating pheromone, and efficient cell fusion; localized to the plasma membrane; significantly similar to mammalian Rap GTPases [Source:SGD;Acc:S000003384]</Hit_def>
  <Hit_accession>YGR152C</Hit_accession>
  <Hit_len>272</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>148.288</Hsp_bit-score>
      <Hsp_score>373</Hsp_score>
      <Hsp_evalue>1.93572e-43</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>924</Hsp_query-to>
      <Hsp_hit-from>16</Hsp_hit-from>
      <Hsp_hit-to>165</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>76</Hsp_identity>
      <Hsp_positive>108</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>156</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIEDSYIKHTEIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKDRDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAFQELVRVI</Hsp_qseq>
      <Hsp_hseq>KSCLTVQFVQGVYLDTYDPTIEDSYRKTIEIDNKVFDLEILDTAGIAQFTAMRELYIKSGMGFLLVYSVTDRQSLEELMELREQVLRIKDSDRVPMVLIGNKADLINERVISVEEGIEVSSKWG-----RVPFYETSALLRS-NVDEVFVDLVRQI</Hsp_hseq>
      <Hsp_midline>KS LT+QF Q +++  YDPTIEDSY K  EID +   L++LDTAG  +F+AMRE Y+++G GFL+VYSVTD+ S E +    + +LR+KD D  PM+L+ NK DL++ R IS E+G E+++K+      ++P+ ETSA     NVD+ F +LVR I</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YER031C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:214076:214747:-1 gene:YER031C transcript:YER031C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT31 description:Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi [Source:SGD;Acc:S000000833]</Hit_def>
  <Hit_accession>YER031C</Hit_accession>
  <Hit_len>223</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>85.8853</Hsp_bit-score>
      <Hsp_score>211</Hsp_score>
      <Hsp_evalue>1.98001e-20</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>924</Hsp_query-to>
      <Hsp_hit-from>26</Hsp_hit-from>
      <Hsp_hit-to>174</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>58</Hsp_identity>
      <Hsp_positive>84</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>158</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIEDSYIKHT-EIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLI-LRVKDRDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAFQELVRVI</Hsp_qseq>
      <Hsp_hseq>KSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCN--HWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQE------NQLLFTETSALNSE-NVDKAFEELINTI</Hsp_hseq>
      <Hsp_midline>KS L  +F +  F +D   TI   +   T EIDG+     + DTAGQE + A+   Y R   G LIVY ++  +S+E+    H L  LR    D+  + L+ NK DL HLR + +E+ +  A +       Q+ + ETSA +   NVDKAF+EL+  I</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YFL038C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:55366:55986:-1 gene:YFL038C transcript:YFL038C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT1 description:Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles [Source:SGD;Acc:S000001856]</Hit_def>
  <Hit_accession>YFL038C</Hit_accession>
  <Hit_len>206</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>85.1149</Hsp_bit-score>
      <Hsp_score>209</Hsp_score>
      <Hsp_evalue>3.43499e-20</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>927</Hsp_query-to>
      <Hsp_hit-from>21</Hsp_hit-from>
      <Hsp_hit-to>170</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>58</Hsp_identity>
      <Hsp_positive>81</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>158</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIE-DSYIKHTEIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKDRDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAFQELVRVIR</Hsp_qseq>
      <Hsp_hseq>KSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYA-TSTVLKLLVGNKCDLKDKRVVEYDVAKEFA------DANKMPFLETSALDST-NVEDAFLTMARQIK</Hsp_hseq>
      <Hsp_midline>KS L ++F    +  DY  TI  D  IK  E+DG+   L + DTAGQE F  +   Y R   G +IVY VTD+ SF  V+ + Q I R     +   +LV NK DL   R +  +  +E A         ++P++ETSA D   NV+ AF  + R I+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YML001W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:267174:267800:1 gene:YML001W transcript:YML001W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT7 description:Rab family GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); interacts with the cargo selection/retromer complex for retrograde sorting; similar to mammalian Rab7 [Source:SGD;Acc:S000004460]</Hit_def>
  <Hit_accession>YML001W</Hit_accession>
  <Hit_len>208</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>82.8037</Hsp_bit-score>
      <Hsp_score>203</Hsp_score>
      <Hsp_evalue>2.08994e-19</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>918</Hsp_query-to>
      <Hsp_hit-from>21</Hsp_hit-from>
      <Hsp_hit-to>174</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>53</Hsp_identity>
      <Hsp_positive>87</Hsp_positive>
      <Hsp_gaps>10</Hsp_gaps>
      <Hsp_align-len>159</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIEDSYI-KHTEIDG-QWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLIL---RVKDRDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAFQELVR</Hsp_qseq>
      <Hsp_hseq>KTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAK----SLGDIPLFLTSAKN-AINVDTAFEEIAR</Hsp_hseq>
      <Hsp_midline>K++L  ++    +   Y  TI   ++ K   +DG + A + V DTAGQE F ++   + R  D  ++VY VT+ +SFE+++ +    L    V   ++FP +++ NK+D    +KI SE+  +  AK     L  IP   TSAK+  +NVD AF+E+ R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YFL005W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:130334:130981:1 gene:YFL005W transcript:YFL005W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEC4 description:Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane [Source:SGD;Acc:S000001889]</Hit_def>
  <Hit_accession>YFL005W</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>80.4925</Hsp_bit-score>
      <Hsp_score>197</Hsp_score>
      <Hsp_evalue>1.8023e-18</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>927</Hsp_query-to>
      <Hsp_hit-from>33</Hsp_hit-from>
      <Hsp_hit-to>181</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>52</Hsp_identity>
      <Hsp_positive>90</Hsp_positive>
      <Hsp_gaps>10</Hsp_gaps>
      <Hsp_align-len>158</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIE-DSYIKHTEIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKDRDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAFQELVRVIR</Hsp_qseq>
      <Hsp_hseq>KSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTV-NEHANDEAQLLLVGNKSD-METRVVTADQGEALAKE------LGIPFIESSAKNDD-NVNEIFFTLAKLIQ</Hsp_hseq>
      <Hsp_midline>KS L ++F +  F   +  TI  D  IK  +I+G+   L + DTAGQE F  +   Y R   G ++VY VTD+ +F +++++ + +      D   ++LV NK D M  R ++++QG+ +A +      + IP+IE+SAK+   NV++ F  L ++I+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YCR027C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:III:167370:167999:-1 gene:YCR027C transcript:YCR027C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHB1 description:Putative Rheb-related GTPase; involved in regulating canavanine resistance and arginine uptake; member of the Ras superfamily of G-proteins [Source:SGD;Acc:S000000622]</Hit_def>
  <Hit_accession>YCR027C</Hit_accession>
  <Hit_len>209</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>75.8702</Hsp_bit-score>
      <Hsp_score>185</Hsp_score>
      <Hsp_evalue>7.85977e-17</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>918</Hsp_query-to>
      <Hsp_hit-from>29</Hsp_hit-from>
      <Hsp_hit-to>187</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>47</Hsp_identity>
      <Hsp_positive>85</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>160</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIEDSYIKHTEIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKDRDSFPMILVANKVDLMHL-----RKISSEQGQEMAAKY-SNSHLMQIPYIETSAKDPPLNVDKAFQELVR</Hsp_qseq>
      <Hsp_hseq>KTTLTVRFVESRFVESYYPTIENEFTRIIPYKSHDCTLEILDTAGQDEVSLLNIKSLTGVRGIILCYSIINRASFDLIPILWDKLVDQLGKDNLPVILVGTKADLGRSTKGVKRCVTKAEGEKLASTIGSQDKRNQAAFIECSA-ELDYNVEETFMLLLK</Hsp_hseq>
      <Hsp_midline>K+ LT++F +  FV  Y PTIE+ + +          L++LDTAGQ+E S +  + +    G ++ YS+ ++ASF+ +      ++    +D+ P+ILV  K DL        R ++  +G+++A+   S     Q  +IE SA +   NV++ F  L++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YGL210W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:93792:94460:1 gene:YGL210W transcript:YGL210W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT32 description:Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication [Source:SGD;Acc:S000003178]</Hit_def>
  <Hit_accession>YGL210W</Hit_accession>
  <Hit_len>222</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>75.485</Hsp_bit-score>
      <Hsp_score>184</Hsp_score>
      <Hsp_evalue>1.26835e-16</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>924</Hsp_query-to>
      <Hsp_hit-from>26</Hsp_hit-from>
      <Hsp_hit-to>174</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>53</Hsp_identity>
      <Hsp_positive>82</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>158</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIEDSYIKHT-EIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLI-LRVKDRDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAFQELVRVI</Hsp_qseq>
      <Hsp_hseq>KSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCN--HWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAME------NQMLFTETSALNSD-NVDKAFRELIVAI</Hsp_hseq>
      <Hsp_midline>KS L  +F    F ++   TI   +   T E++ +     + DTAGQE + A+   Y R   G LIVY ++  +S+E+    H L  LR    D+  + L+ NK DL HLR + +++ +  A +       Q+ + ETSA +   NVDKAF+EL+  I</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YLR262C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:668244:668891:-1 gene:YLR262C transcript:YLR262C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT6 description:Rab family GTPase; required for endosome-to-Golgii, intra-Golgi retrograde, and retrograde Golgi-to-ER transport; temporarily at the Golgi, dissociating into the cytosol on arrival of the late Golgi GTPase Ypt32p; Golgi-localized form is GTP bound, while cytosolic form is GDP-bound; required for delivery of Atg9p to the phagophore assembly site during autophagy under heat stress, with Ypt6p for starvation induced autophagy and for the CVT pathway; homolog of mammalian Rab6 [Source:SGD;Acc:S000004252]</Hit_def>
  <Hit_accession>YLR262C</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>67.3958</Hsp_bit-score>
      <Hsp_score>163</Hsp_score>
      <Hsp_evalue>9.35099e-14</Hsp_evalue>
      <Hsp_query-from>406</Hsp_query-from>
      <Hsp_query-to>924</Hsp_query-to>
      <Hsp_hit-from>6</Hsp_hit-from>
      <Hsp_hit-to>173</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>54</Hsp_identity>
      <Hsp_positive>97</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>174</Hsp_align-len>
      <Hsp_qseq>ENLPTYKXXXXXXXXXXKSALTIQFFQKIFVVDYDPTIEDSYIKHT-EIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKDRDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAFQELVRVI</Hsp_qseq>
      <Hsp_hseq>KSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEG-EKKAKLLGAKI----FMETSTK-AGYNVKALFKKIAKSL</Hsp_hseq>
      <Hsp_midline>++L  YK+V +G+ GVGK++L  +F    F   Y  TI   ++  T  +D +   L + DTAGQE F ++   Y+R     +IVY +T + SFE+++++ + +   +  ++  + +V NK DL   R+IS+E+G E  AK   + +    ++ETS K    NV   F+++ + +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YKR055W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:548216:549091:1 gene:YKR055W transcript:YKR055W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO4 description:Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi [Source:SGD;Acc:S000001763]</Hit_def>
  <Hit_accession>YKR055W</Hit_accession>
  <Hit_len>291</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>67.0106</Hsp_bit-score>
      <Hsp_score>162</Hsp_score>
      <Hsp_evalue>3.20002e-13</Hsp_evalue>
      <Hsp_query-from>340</Hsp_query-from>
      <Hsp_query-to>924</Hsp_query-to>
      <Hsp_hit-from>48</Hsp_hit-from>
      <Hsp_hit-to>238</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>68</Hsp_identity>
      <Hsp_positive>104</Hsp_positive>
      <Hsp_gaps>10</Hsp_gaps>
      <Hsp_align-len>198</Hsp_align-len>
      <Hsp_qseq>PCIRSLA-VPAEESGMATGGMPNENLPTYKXXXXXXXXXXKSALTIQFFQKIFVVDYDPTIEDSYIKHTE-IDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKD-RDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAFQELVRVI</Hsp_qseq>
      <Hsp_hseq>PFARSLSTIPSYEQMKRTNKLPDYHL---KIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDL--WFPEVKHFCPSTPIMLVGLKSDLYEADNL-SDLVEPSSAESLAKRLGAFAHIQCSARLKE-NIDEVFETAIHTL</Hsp_hseq>
      <Hsp_midline>P  RSL+ +P+ E    T  +P+ +L   K+VVVGDG VGK+ L I + Q  F  DY PTI ++Y+ + E  +GQ   L + DTAGQEE+S +R       D  ++ YSV  K S ++VE        VK    S P++LV  K DL     + S+  +  +A+     L    +I+ SA+    N+D+ F+  +  +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YLR229C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:604212:604787:-1 gene:YLR229C transcript:YLR229C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDC42 description:Small rho-like GTPase; essential for establishment and maintenance of cell polarity; plays a role late in cell fusion via activation of key cell fusion regulator Fus2p; mutants have defects in the organization of actin and septins; human homolog CDC42 can complement yeast cdc42 mutant [Source:SGD;Acc:S000004219]</Hit_def>
  <Hit_accession>YLR229C</Hit_accession>
  <Hit_len>191</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>65.0846</Hsp_bit-score>
      <Hsp_score>157</Hsp_score>
      <Hsp_evalue>4.14133e-13</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>870</Hsp_query-to>
      <Hsp_hit-from>16</Hsp_hit-from>
      <Hsp_hit-to>159</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>47</Hsp_identity>
      <Hsp_positive>68</Hsp_positive>
      <Hsp_gaps>30</Hsp_gaps>
      <Hsp_align-len>156</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIEDSYIKHTEIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHV------ERFHQLILRVKDRDSFPMILVANKVDL------------MHLRKISSEQGQEMAAKYSNSHLMQIPYIETSA</Hsp_qseq>
      <Hsp_hseq>KTCLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPPSFENVKEKWFPEVHHHC-------PGVPCLVVGTQIDLRDDKVIIEKLQRQRLRPITSEQGSRLA-----RELKAVKYVECSA</Hsp_hseq>
      <Hsp_midline>K+ L I +    F  DY PT+ D+Y     I  +   L + DTAGQE++  +R     + D FL+ +SV    SFE+V      E  H            P ++V  ++DL              LR I+SEQG  +A       L  + Y+E SA</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YOR089C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:490196:490828:-1 gene:YOR089C transcript:YOR089C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VPS21 description:Endosomal Rab family GTPase; required for endocytic transport and sorting of vacuolar hydrolases; required for endosomal localization of the CORVET complex; required with YPT52 for MVB biogenesis and sorting; involved in autophagy and ionic stress tolerance; geranylgeranylation required for membrane association; protein abundance increases in response to DNA replication stress; mammalian Rab5 homolog; VPS21 has a paralog, YPT53, that arose from the whole genome duplication [Source:SGD;Acc:S000005615]</Hit_def>
  <Hit_accession>YOR089C</Hit_accession>
  <Hit_len>210</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>62.3882</Hsp_bit-score>
      <Hsp_score>150</Hsp_score>
      <Hsp_evalue>4.34945e-12</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>903</Hsp_query-to>
      <Hsp_hit-from>20</Hsp_hit-from>
      <Hsp_hit-to>164</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>78</Hsp_positive>
      <Hsp_gaps>12</Hsp_gaps>
      <Hsp_align-len>153</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIEDSYI-KHTEIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKDRDSFPMILVANKVDLMH---LRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAF</Hsp_qseq>
      <Hsp_hseq>KSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKD-IIIALVGNKIDMLQEGGERKVAREEGEKLAEEKG------LLFFETSAKTGE-NVNDVF</Hsp_hseq>
      <Hsp_midline>KS++ ++F    F  + +PTI  +++ +   I+      ++ DTAGQE F+++   Y R     L+VY VT   SF     + + +     +D   + LV NK+D++     RK++ E+G+++A +        + + ETSAK    NV+  F</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YPR165W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:875368:875997:1 gene:YPR165W transcript:YPR165W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO1 description:GTP-binding protein of the rho subfamily of Ras-like proteins; involved in establishment of cell polarity; regulates protein kinase C (Pkc1p) and the cell wall synthesizing enzyme 1,3-beta-glucan synthase (Fks1p and Gsc2p) [Source:SGD;Acc:S000006369]</Hit_def>
  <Hit_accession>YPR165W</Hit_accession>
  <Hit_len>209</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>58.151</Hsp_bit-score>
      <Hsp_score>139</Hsp_score>
      <Hsp_evalue>1.32669e-10</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>873</Hsp_query-to>
      <Hsp_hit-from>23</Hsp_hit-from>
      <Hsp_hit-to>167</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>47</Hsp_identity>
      <Hsp_positive>76</Hsp_positive>
      <Hsp_gaps>20</Hsp_gaps>
      <Hsp_align-len>152</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIEDSYIKHTEIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHV-ERFHQLILRVKDRDSFPMILVANKVDLMH-------LRK-----ISSEQGQEMAAKYSNSHLMQIPYIETSAK</Hsp_qseq>
      <Hsp_hseq>KTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFC--QGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATG-----YYECSAK</Hsp_hseq>
      <Hsp_midline>K+ L I F +  F   Y PT+ ++Y+   E+DG+   L + DTAGQE++  +R       +  LI +S+    S E+V E++   +L        P+ILV  KVDL +       LR+     ++S++GQ +A +   +      Y E SAK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YNL093W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:449868:450530:1 gene:YNL093W transcript:YNL093W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT53 description:Stress-induced Rab family GTPase; required for vacuolar protein sorting and endocytosis; involved in ionic stress tolerance; similar to Vps21p and Ypt52p; functional homolog of Vps21p; mammalian Rab5 homolog; YPT53 has a paralog, VPS21, that arose from the whole genome duplication [Source:SGD;Acc:S000005037]</Hit_def>
  <Hit_accession>YNL093W</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>57.7658</Hsp_bit-score>
      <Hsp_score>138</Hsp_score>
      <Hsp_evalue>2.24925e-10</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>912</Hsp_query-to>
      <Hsp_hit-from>25</Hsp_hit-from>
      <Hsp_hit-to>175</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>45</Hsp_identity>
      <Hsp_positive>74</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>157</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIEDSYI-KHTEIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASF----EHVERFHQLILRVKDRDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQIPYIETSAKDPPLNVDKAFQEL</Hsp_qseq>
      <Hsp_hseq>KSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHE-----KVGHDIVIALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGE-NIYQIFQTL</Hsp_hseq>
      <Hsp_midline>KS++ ++F    F    +PTI  +++ K    DG+    ++ DTAGQE F+ +   Y R     L+V+ VT++ SF      VE  H+     K      + LV NK+DL++    +  +  +  A  +      + Y E SAK    N+ + FQ L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YLR293C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:720771:721430:-1 gene:YLR293C transcript:YLR293C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GSP1 description:Ran GTPase; GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; regulated by Srm1p, Rna1p, Yrb1p, Yrb2p, Yrp4p, Yrb30p, Cse1p and Kap95p; GSP1 has a paralog, GSP2, that arose from the whole genome duplication [Source:SGD;Acc:S000004284]</Hit_def>
  <Hit_accession>YLR293C</Hit_accession>
  <Hit_len>219</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.6102</Hsp_bit-score>
      <Hsp_score>135</Hsp_score>
      <Hsp_evalue>5.96814e-10</Hsp_evalue>
      <Hsp_query-from>568</Hsp_query-from>
      <Hsp_query-to>918</Hsp_query-to>
      <Hsp_hit-from>63</Hsp_hit-from>
      <Hsp_hit-to>168</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>63</Hsp_positive>
      <Hsp_gaps>13</Hsp_gaps>
      <Hsp_align-len>118</Hsp_align-len>
      <Hsp_qseq>LDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKDRDSFPMILVANKVDLMHLRKISSEQGQEMAAKYSNSHLMQ-IPYIETSAKDPPLNVDKAFQELVR</Hsp_qseq>
      <Hsp_hseq>FDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC--ENIPIVLCGNKVDVKE-RKVK--------AKTITFHRKKNLQYYDISAKS-NYNFEKPFLWLAR</Hsp_hseq>
      <Hsp_midline> DV DTAGQE+F  +R+ Y       +I++ VT + ++++V  +H+ ++RV   ++ P++L  NKVD+   RK+         AK    H  + + Y + SAK    N +K F  L R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>17</Hit_num>
  <Hit_id>YOR185C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:681444:682106:-1 gene:YOR185C transcript:YOR185C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GSP2 description:GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication [Source:SGD;Acc:S000005711]</Hit_def>
  <Hit_accession>YOR185C</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.225</Hsp_bit-score>
      <Hsp_score>134</Hsp_score>
      <Hsp_evalue>6.82838e-10</Hsp_evalue>
      <Hsp_query-from>568</Hsp_query-from>
      <Hsp_query-to>798</Hsp_query-to>
      <Hsp_hit-from>64</Hsp_hit-from>
      <Hsp_hit-to>137</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>49</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>77</Hsp_align-len>
      <Hsp_qseq>LDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKDRDSFPMILVANKVDLMHLRKISSE</Hsp_qseq>
      <Hsp_hseq>FDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC--ENIPIVLCGNKVDVKE-RKVKAK</Hsp_hseq>
      <Hsp_midline> DV DTAGQE+F  +R+ Y       +I++ VT + ++++V  +H+ ++RV   ++ P++L  NKVD+   RK+ ++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>18</Hit_num>
  <Hit_id>YIL118W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:139752:140447:1 gene:YIL118W transcript:YIL118W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO3 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p [Source:SGD;Acc:S000001380]</Hit_def>
  <Hit_accession>YIL118W</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>54.6842</Hsp_bit-score>
      <Hsp_score>130</Hsp_score>
      <Hsp_evalue>2.63978e-09</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>921</Hsp_query-to>
      <Hsp_hit-from>29</Hsp_hit-from>
      <Hsp_hit-to>209</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>47</Hsp_identity>
      <Hsp_positive>85</Hsp_positive>
      <Hsp_gaps>36</Hsp_gaps>
      <Hsp_align-len>186</Hsp_align-len>
      <Hsp_qseq>KSALTIQFFQKIFVVDYDPTIEDSYIKHTEIDGQWAILDVLDTAGQEEFSAMREQYMRTGDGFLIVYSVTDKASFEHVERFHQLILRVKDR-DSFPMILVANKVDLMHL---------------RKISSEQGQEMAAKYSNSHLMQ-------------IPYIETSAKDPPLN--VDKAFQELVRV</Hsp_qseq>
      <Hsp_hseq>KTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQ--NKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITPNNIQQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECSAK---LNKGVNEAFTEAARV</Hsp_hseq>
      <Hsp_midline>K++L   F +  F   Y+PT+ ++YI    +D +   L + DTAGQEEF  +R          ++ +S+  + S E+V+  ++ +  + D  +   ++LVA K DL +                  +S++ G  + +  +  +L+              + Y+E SAK   LN  V++AF E  RV</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>89</Statistics_hsp-len>
      <Statistics_eff-space>514193407</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>2</Iteration_iter-num>
  <Iteration_query-ID>Query_2</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052001-RA transcript Note:&quot;Similar to tut1 Speckle targeted PIP5K1A-regulated poly(A) polymerase (Danio rerio)&quot; offset:0 AED:0.39 eAED:0.40 QI:0|0.66|0.71|1|0.33|0.42|7|0|322</Iteration_query-def>
  <Iteration_query-len>969</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>90</Statistics_hsp-len>
      <Statistics_eff-space>540575611</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>3</Iteration_iter-num>
  <Iteration_query-ID>Query_3</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052002-RA transcript Note:&quot;Similar to TUT1 Speckle targeted PIP5K1A-regulated poly(A) polymerase (Homo sapiens)&quot; offset:0 AED:0.27 eAED:0.27 QI:0|0.43|0.47|0.47|0.56|0.58|17|0|892</Iteration_query-def>
  <Iteration_query-len>2679</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>98</Statistics_hsp-len>
      <Statistics_eff-space>1802477265</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>4</Iteration_iter-num>
  <Iteration_query-ID>Query_4</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052003-RA transcript Note:&quot;Similar to tmem237a Transmembrane protein 237A (Danio rerio)&quot; offset:0 AED:0.50 eAED:0.50 QI:0|0.42|0.37|0.62|1|1|8|0|227</Iteration_query-def>
  <Iteration_query-len>684</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>86</Statistics_hsp-len>
      <Statistics_eff-space>333198314</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>5</Iteration_iter-num>
  <Iteration_query-ID>Query_5</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052005-RA transcript Note:&quot;Similar to Sgce Epsilon-sarcoglycan (Rattus norvegicus)&quot; offset:0 AED:0.13 eAED:0.13 QI:0|0.42|0.62|0.75|0.42|0.5|8|2166|388</Iteration_query-def>
  <Iteration_query-len>3333</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>100</Statistics_hsp-len>
      <Statistics_eff-space>2278861737</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>6</Iteration_iter-num>
  <Iteration_query-ID>Query_6</Iteration_query-ID>
  <Iteration_query-def>PMZ_0041401-RA transcript Note:&quot;Similar to COL6A1 Collagen alpha-1(VI) chain (Homo sapiens)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0.4|0.33|6|545|110</Iteration_query-def>
  <Iteration_query-len>878</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>89</Statistics_hsp-len>
      <Statistics_eff-space>472313401</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>7</Iteration_iter-num>
  <Iteration_query-ID>Query_7</Iteration_query-ID>
  <Iteration_query-def>PMZ_0028659-RA transcript Note:&quot;Similar to COL6A1 Collagen alpha-1(VI) chain (Gallus gallus)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0.66|0.5|4|0|194</Iteration_query-def>
  <Iteration_query-len>585</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>85</Statistics_hsp-len>
      <Statistics_eff-space>258837370</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>8</Iteration_iter-num>
  <Iteration_query-ID>Query_8</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052006-RA transcript Note:&quot;Similar to ACLY ATP-citrate synthase (Homo sapiens)&quot; offset:190 AED:0.12 eAED:0.12 QI:190|0.82|0.91|1|0.39|0.54|24|953|988</Iteration_query-def>
  <Iteration_query-len>4110</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YOR142W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:593057:594046:1 gene:YOR142W transcript:YOR142W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LSC1 description:Alpha subunit of succinyl-CoA ligase; succinyl-CoA ligase is a mitochondrial enzyme of the TCA cycle that catalyzes the nucleotide-dependent conversion of succinyl-CoA to succinate; phosphorylated [Source:SGD;Acc:S000005668]</Hit_def>
  <Hit_accession>YOR142W</Hit_accession>
  <Hit_len>329</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.2174</Hsp_bit-score>
      <Hsp_score>121</Hsp_score>
      <Hsp_evalue>5.07929e-07</Hsp_evalue>
      <Hsp_query-from>1676</Hsp_query-from>
      <Hsp_query-to>2119</Hsp_query-to>
      <Hsp_hit-from>82</Hsp_hit-from>
      <Hsp_hit-to>240</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>45</Hsp_identity>
      <Hsp_positive>76</Hsp_positive>
      <Hsp_gaps>27</Hsp_gaps>
      <Hsp_align-len>167</Hsp_align-len>
      <Hsp_qseq>FASLRSAYDSTVETMSF----PQIHTIAI-------------IAEGIPEALTRRLIKMADAKGVT-VIGPATVGGIKPGC-FKIGNTGGMLDNILASKLYRPGSVAYVSRSGGMSNELNNIVSRTTDGVYEGVAIGGDRYPGSTFLDHVLRYQDTPEVKMMVVLGEV</Hsp_qseq>
      <Hsp_hseq>FASVKDAIKETGATASAIFVPPPIAAAAIKESIEAEIPLAVCITEGIPQHDMLYIAEMLQTQDKTRLVGPNCPGIINPATKVRIG--------IQPPKIFQAGKIGIISRSGTLTYEAVQQTTKTDLGQSLVIGMGGDAFPGTDFIDALKLFLEDETTEGIIMLGEI</Hsp_hseq>
      <Hsp_midline>FAS++ A   T  T S     P I   AI             I EGIP+     + +M   +  T ++GP   G I P    +IG        I   K+++ G +  +SRSG ++ E     ++T  G    + +GGD +PG+ F+D +  + +    + +++LGE+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>102</Statistics_hsp-len>
      <Statistics_eff-space>2841419356</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>9</Iteration_iter-num>
  <Iteration_query-ID>Query_9</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052008-RA transcript Note:&quot;Similar to POU6F2 POU domain, class 6, transcription factor 2 (Homo sapiens)&quot; offset:421 AED:0.23 eAED:0.33 QI:421|0.6|0.66|1|0.6|0.5|6|0|318</Iteration_query-def>
  <Iteration_query-len>1378</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YML027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:221406:222563:1 gene:YML027W transcript:YML027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YOX1 description:Homeobox transcriptional repressor; binds to Mcm1p and to early cell cycle boxes (ECBs) in the promoters of cell cycle-regulated genes expressed in M/G1 phase; expression is cell cycle-regulated; phosphorylated by Cdc28p; relocalizes from nucleus to cytoplasm upon DNA replication stress; YOX1 has a paralog, YHP1, that arose from the whole genome duplication [Source:SGD;Acc:S000004489]</Hit_def>
  <Hit_accession>YML027W</Hit_accession>
  <Hit_len>385</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>45.8246</Hsp_bit-score>
      <Hsp_score>107</Hsp_score>
      <Hsp_evalue>8.82055e-06</Hsp_evalue>
      <Hsp_query-from>950</Hsp_query-from>
      <Hsp_query-to>1141</Hsp_query-to>
      <Hsp_hit-from>170</Hsp_hit-from>
      <Hsp_hit-to>232</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>64</Hsp_align-len>
      <Hsp_qseq>VGGEPSKKRKRRTSFTPQALELLNAHFERNTHPSGQEMTAIAERLCYDREVVRVWFCNKRQALK</Hsp_qseq>
      <Hsp_hseq>IDNAPLARRKRRRTSS-QELSILQAEFEKCPAPSKEKRIELAESCHMTEKAVQIWFQNKRQAVK</Hsp_hseq>
      <Hsp_midline>+   P  +RKRR + + Q L +L A FE+   PS ++   +AE      + V++WF NKRQA+K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>93</Statistics_hsp-len>
      <Statistics_eff-space>841897722</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>10</Iteration_iter-num>
  <Iteration_query-ID>Query_10</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052009-RA transcript Note:&quot;Protein of unknown function&quot; offset:451 AED:0.26 eAED:0.26 QI:451|0.83|0.85|0.85|0.33|0.28|7|0|250</Iteration_query-def>
  <Iteration_query-len>1204</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>92</Statistics_hsp-len>
      <Statistics_eff-space>712821903</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>11</Iteration_iter-num>
  <Iteration_query-ID>Query_11</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052011-RA transcript Note:&quot;Similar to CNTNAP5 Contactin-associated protein-like 5 (Gallus gallus)&quot; offset:0 AED:0.16 eAED:0.16 QI:0|0|0.05|0.76|1|1|17|2274|880</Iteration_query-def>
  <Iteration_query-len>4917</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>103</Statistics_hsp-len>
      <Statistics_eff-space>3431834112</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>12</Iteration_iter-num>
  <Iteration_query-ID>Query_12</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052015-RA transcript Note:&quot;Similar to Ezh2 Histone-lysine N-methyltransferase EZH2 (Mus musculus)&quot; offset:990 AED:0.19 eAED:0.19 QI:990|0.82|0.83|1|0.41|0.33|18|358|626</Iteration_query-def>
  <Iteration_query-len>3229</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YHR119W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VIII:346043:349285:1 gene:YHR119W transcript:YHR119W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET1 description:Histone methyltransferase, subunit of the COMPASS (Set1C) complex; COMPASS methylates histone H3K4; Set1p-dependent H3K4 trimethylation recruits Nrd1p, allowing efficient termination of snoRNAs and cryptic unstable transcripts (CUTs) by Nrd1p-Nab3p-Sen1p pathway; modulates histone acetylation levels in promoter proximal regions to ensure efficient Nrd1p-dependent termination; required in transcriptional silencing near telomeres and at silent mating type loci; has a SET domain [Source:SGD;Acc:S000001161]</Hit_def>
  <Hit_accession>YHR119W</Hit_accession>
  <Hit_len>1080</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>92.8189</Hsp_bit-score>
      <Hsp_score>229</Hsp_score>
      <Hsp_evalue>1.66582e-19</Hsp_evalue>
      <Hsp_query-from>2431</Hsp_query-from>
      <Hsp_query-to>2820</Hsp_query-to>
      <Hsp_hit-from>932</Hsp_hit-from>
      <Hsp_hit-to>1058</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>51</Hsp_identity>
      <Hsp_positive>73</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>132</Hsp_align-len>
      <Hsp_qseq>QCNTKQCPCYLAHLLLAPSDVAGWGIFIKVPVQKNEFISEYCGEIISQDEADRRGKVYDK--YMCSFLFNLNNDFVVDATRKGNKIRFANHSVSPNCYAKVMMVNGDHRIGIFAKRAIQTGEELFFDYRYSQ</Hsp_qseq>
      <Hsp_hseq>QLNKRKKP-----VMFARSAIHNWGLYALDSIAAKEMIIEYVGERIRQPVAEMREKRYLKNGIGSSYLFRVDENTVIDATKKGGIARFINHCCDPNCTAKIIKVGGRRRIVIYALRDIAASEELTYDYKFER</Hsp_hseq>
      <Hsp_midline>Q N ++ P     ++ A S +  WG++    +   E I EY GE I Q  A+ R K Y K     S+LF ++ + V+DAT+KG   RF NH   PNC AK++ V G  RI I+A R I   EEL +DY++ +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YJL168C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:102227:104428:-1 gene:YJL168C transcript:YJL168C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SET2 description:Histone methyltransferase with a role in transcriptional elongation; methylates H3 lysine 36 (H3K36), which suppresses incorporation of acetylated histones and signals for the deacetylation of these histones within transcribed genes; associates with the C-terminal domain(CTD) of Rpo21p; H3K36me3 (trimethylation) requires Spt6p, proline 38 on H3, CTD of Rpo21p, Ctk1p, and C-terminal SRI domain of Ste2p; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000003704]</Hit_def>
  <Hit_accession>YJL168C</Hit_accession>
  <Hit_len>733</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>87.0409</Hsp_bit-score>
      <Hsp_score>214</Hsp_score>
      <Hsp_evalue>7.23447e-18</Hsp_evalue>
      <Hsp_query-from>2308</Hsp_query-from>
      <Hsp_query-to>2808</Hsp_query-to>
      <Hsp_hit-from>76</Hsp_hit-from>
      <Hsp_hit-to>236</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>58</Hsp_identity>
      <Hsp_positive>83</Hsp_positive>
      <Hsp_gaps>18</Hsp_gaps>
      <Hsp_align-len>173</Hsp_align-len>
      <Hsp_qseq>DHPGQVCDSSCPCVNAQNFCE---KFCQ-CSSECQNRFPGCRCKAQCNTKQCPCYLAHLLLAPSDVAGWGIFIKVPVQKNEFISEYCGEIISQDEADRRGKVYDK--YMCSFLFNLNNDFVVDATRKGNKIRFANHSVSPNCYAKVMMVNGDHRIGIFAKRAIQTGEELFFDY</Hsp_qseq>
      <Hsp_hseq>DGVNHACDEDSDCINRLTLIECVNDLCSSCGNDCQNQ--------RFQKKQ----YAPIAIFKTKHKGYGVRAEQDIEANQFIYEYKGEVIEEMEFRDRLIDYDQRHFKHFYFMMLQNGEFIDATIKGSLARFCNHSCSPNAYVNKWVVKDKLRMGIFAQRKILKGEEITFDY</Hsp_hseq>
      <Hsp_midline>D     CD    C+N     E     C  C ++CQN+        +   KQ     A + +  +   G+G+  +  ++ N+FI EY GE+I + E   R   YD+  +   +   L N   +DAT KG+  RF NHS SPN Y    +V    R+GIFA+R I  GEE+ FDY</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>100</Statistics_hsp-len>
      <Statistics_eff-space>2199969392</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>13</Iteration_iter-num>
  <Iteration_query-ID>Query_13</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052038-RA transcript Note:&quot;Similar to COL28A1 Collagen alpha-1(XXVIII) chain (Homo sapiens)&quot; offset:0 AED:0.35 eAED:0.35 QI:0|0|0|0.22|1|1|22|0|850</Iteration_query-def>
  <Iteration_query-len>2553</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>98</Statistics_hsp-len>
      <Statistics_eff-space>1707252051</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>14</Iteration_iter-num>
  <Iteration_query-ID>Query_14</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052040-RA transcript Note:&quot;Similar to Rnd3 Rho-related GTP-binding protein RhoE (Rattus norvegicus)&quot; offset:0 AED:0.47 eAED:0.47 QI:0|0|0|1|1|1|2|0|70</Iteration_query-def>
  <Iteration_query-len>213</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YPR165W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:875368:875997:1 gene:YPR165W transcript:YPR165W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO1 description:GTP-binding protein of the rho subfamily of Ras-like proteins; involved in establishment of cell polarity; regulates protein kinase C (Pkc1p) and the cell wall synthesizing enzyme 1,3-beta-glucan synthase (Fks1p and Gsc2p) [Source:SGD;Acc:S000006369]</Hit_def>
  <Hit_accession>YPR165W</Hit_accession>
  <Hit_len>209</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>83.1889</Hsp_bit-score>
      <Hsp_score>204</Hsp_score>
      <Hsp_evalue>3.00598e-22</Hsp_evalue>
      <Hsp_query-from>7</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>6</Hsp_hit-from>
      <Hsp_hit-to>68</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>35</Hsp_identity>
      <Hsp_positive>49</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>63</Hsp_align-len>
      <Hsp_qseq>GPAMRCKVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENYTASFEIEKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>GNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQ</Hsp_hseq>
      <Hsp_midline>G ++R K+V++GD  CGKT LL VF+K  FPE Y+PTVFENY A  E++ +R+EL +WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YNL090W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:456565:457143:1 gene:YNL090W transcript:YNL090W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO2 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity and in microtubule assembly [Source:SGD;Acc:S000005034]</Hit_def>
  <Hit_accession>YNL090W</Hit_accession>
  <Hit_len>192</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>72.7886</Hsp_bit-score>
      <Hsp_score>177</Hsp_score>
      <Hsp_evalue>2.01305e-18</Hsp_evalue>
      <Hsp_query-from>1</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>1</Hsp_hit-from>
      <Hsp_hit-to>65</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>65</Hsp_align-len>
      <Hsp_qseq>MDGPAMRCKVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENYTASFEIEKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>MSEKAVRRKLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQ</Hsp_hseq>
      <Hsp_midline>M   A+R K+V+IGD  CGKT+LL+VF    FPE Y PTVFENY     ++  ++ L +WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YIL118W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:139752:140447:1 gene:YIL118W transcript:YIL118W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO3 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p [Source:SGD;Acc:S000001380]</Hit_def>
  <Hit_accession>YIL118W</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>71.633</Hsp_bit-score>
      <Hsp_score>174</Hsp_score>
      <Hsp_evalue>1.08941e-17</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>18</Hsp_hit-from>
      <Hsp_hit-to>74</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>42</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>KVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENYTASFEIEKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>KIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQ</Hsp_hseq>
      <Hsp_midline>K+V++GD  CGKT+LL+VF +  FPE Y PTVFENY     ++ + I L++WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YKR055W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:548216:549091:1 gene:YKR055W transcript:YKR055W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO4 description:Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi [Source:SGD;Acc:S000001763]</Hit_def>
  <Hit_accession>YKR055W</Hit_accession>
  <Hit_len>291</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>64.3142</Hsp_bit-score>
      <Hsp_score>155</Hsp_score>
      <Hsp_evalue>9.94089e-15</Hsp_evalue>
      <Hsp_query-from>10</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>69</Hsp_hit-from>
      <Hsp_hit-to>131</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>63</Hsp_align-len>
      <Hsp_qseq>PAMRCKVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENYTASFE-IEKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>PDYHLKIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQ</Hsp_hseq>
      <Hsp_midline>P    K+VV+GD   GKT LL  + +  FP  YIPT+FENY  + E    Q IEL +WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YLR229C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:604212:604787:-1 gene:YLR229C transcript:YLR229C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDC42 description:Small rho-like GTPase; essential for establishment and maintenance of cell polarity; plays a role late in cell fusion via activation of key cell fusion regulator Fus2p; mutants have defects in the organization of actin and septins; human homolog CDC42 can complement yeast cdc42 mutant [Source:SGD;Acc:S000004219]</Hit_def>
  <Hit_accession>YLR229C</Hit_accession>
  <Hit_len>191</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>6.21795e-11</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>5</Hsp_hit-from>
      <Hsp_hit-to>61</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>KVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENYTASFEIEKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>KCVVVGDGAVGKTCLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQ</Hsp_hseq>
      <Hsp_midline>K VV+GD   GKT LL  +  + FP  Y+PTVF+NY  +  I  +   L ++DT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YNL180C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:299654:300649:-1 gene:YNL180C transcript:YNL180C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO5 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; RAC1 ortholog; regulated by phosphorylation and ubiquitination; likely involved in protein kinase C (Pkc1p)-dependent signal transduction pathway that controls cell integrity [Source:SGD;Acc:S000005124]</Hit_def>
  <Hit_accession>YNL180C</Hit_accession>
  <Hit_len>331</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>1.58527e-09</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>5</Hsp_hit-from>
      <Hsp_hit-to>91</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>41</Hsp_positive>
      <Hsp_gaps>30</Hsp_gaps>
      <Hsp_align-len>87</Hsp_align-len>
      <Hsp_qseq>KVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENYTASFEI------------------------------EKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>KCVIIGDGAVGKTSLLISYTTNSFPTDYVPTVFDNYSTTIAIPNGTASSPLELDNGNDKRGSLSSASSSPSTDRKLYKINLWDTAGQ</Hsp_hseq>
      <Hsp_midline>K V+IGD   GKT+LL  +  + FP  Y+PTVF+NY+ +  I                              +++  ++N+WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YER031C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:214076:214747:-1 gene:YER031C transcript:YER031C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT31 description:Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi [Source:SGD;Acc:S000000833]</Hit_def>
  <Hit_accession>YER031C</Hit_accession>
  <Hit_len>223</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>45.0542</Hsp_bit-score>
      <Hsp_score>105</Hsp_score>
      <Hsp_evalue>8.34581e-08</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>KVVVIGDSQCGKTALLHVFAKDCFPEGYIPTV-FENYTASFEIEKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>KIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQ</Hsp_hseq>
      <Hsp_midline>K+V+IGDS  GK+ LL  F K+ F      T+  E  T + EI+ +RI+  +WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YFL005W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:130334:130981:1 gene:YFL005W transcript:YFL005W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEC4 description:Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane [Source:SGD;Acc:S000001889]</Hit_def>
  <Hit_accession>YFL005W</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>44.2838</Hsp_bit-score>
      <Hsp_score>103</Hsp_score>
      <Hsp_evalue>1.3486e-07</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>22</Hsp_hit-from>
      <Hsp_hit-to>79</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>38</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>KVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENYT-ASFEIEKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>KILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQ</Hsp_hseq>
      <Hsp_midline>K+++IGDS  GK+ LL  F +D F   +I T+  ++   + +I  ++++L +WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YFL038C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:55366:55986:-1 gene:YFL038C transcript:YFL038C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT1 description:Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles [Source:SGD;Acc:S000001856]</Hit_def>
  <Hit_accession>YFL038C</Hit_accession>
  <Hit_len>206</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>43.8986</Hsp_bit-score>
      <Hsp_score>102</Hsp_score>
      <Hsp_evalue>2.01622e-07</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>10</Hsp_hit-from>
      <Hsp_hit-to>67</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>19</Hsp_identity>
      <Hsp_positive>38</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>KVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENYT-ASFEIEKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQ</Hsp_hseq>
      <Hsp_midline>K+++IG+S  GK+ LL  F+ D +   YI T+  ++   + E++ + ++L +WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YGL210W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:93792:94460:1 gene:YGL210W transcript:YGL210W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT32 description:Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication [Source:SGD;Acc:S000003178]</Hit_def>
  <Hit_accession>YGL210W</Hit_accession>
  <Hit_len>222</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>43.8986</Hsp_bit-score>
      <Hsp_score>102</Hsp_score>
      <Hsp_evalue>2.05299e-07</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>KVVVIGDSQCGKTALLHVFAKDCFPEGYIPTV-FENYTASFEIEKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQ</Hsp_hseq>
      <Hsp_midline>K+V+IGDS  GK+ LL  F  D F      T+  E  T + E+E ++I+  +WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YML001W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:267174:267800:1 gene:YML001W transcript:YML001W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT7 description:Rab family GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); interacts with the cargo selection/retromer complex for retrograde sorting; similar to mammalian Rab7 [Source:SGD;Acc:S000004460]</Hit_def>
  <Hit_accession>YML001W</Hit_accession>
  <Hit_len>208</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>42.3578</Hsp_bit-score>
      <Hsp_score>98</Hsp_score>
      <Hsp_evalue>5.9926e-07</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>10</Hsp_hit-from>
      <Hsp_hit-to>68</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>18</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>KVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENY-TASFEIEKQRIE-LNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>KVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQ</Hsp_hseq>
      <Hsp_midline>KV+++GDS  GKT+L+H +  D + + Y  T+  ++ T    ++  ++  + +WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YNL093W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:449868:450530:1 gene:YNL093W transcript:YNL093W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT53 description:Stress-induced Rab family GTPase; required for vacuolar protein sorting and endocytosis; involved in ionic stress tolerance; similar to Vps21p and Ypt52p; functional homolog of Vps21p; mammalian Rab5 homolog; YPT53 has a paralog, VPS21, that arose from the whole genome duplication [Source:SGD;Acc:S000005037]</Hit_def>
  <Hit_accession>YNL093W</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>41.2022</Hsp_bit-score>
      <Hsp_score>95</Hsp_score>
      <Hsp_evalue>2.07944e-06</Hsp_evalue>
      <Hsp_query-from>10</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>9</Hsp_hit-from>
      <Hsp_hit-to>71</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>63</Hsp_align-len>
      <Hsp_qseq>PAMRCKVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENY-TASFEIEKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>PTLTIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQ</Hsp_hseq>
      <Hsp_midline>P +  KVV++G+S  GK++++  F  D F E   PT+   + T     + + I+  +WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YLR262C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:668244:668891:-1 gene:YLR262C transcript:YLR262C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT6 description:Rab family GTPase; required for endosome-to-Golgii, intra-Golgi retrograde, and retrograde Golgi-to-ER transport; temporarily at the Golgi, dissociating into the cytosol on arrival of the late Golgi GTPase Ypt32p; Golgi-localized form is GTP bound, while cytosolic form is GDP-bound; required for delivery of Atg9p to the phagophore assembly site during autophagy under heat stress, with Ypt6p for starvation induced autophagy and for the CVT pathway; homolog of mammalian Rab6 [Source:SGD;Acc:S000004252]</Hit_def>
  <Hit_accession>YLR262C</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>39.2762</Hsp_bit-score>
      <Hsp_score>90</Hsp_score>
      <Hsp_evalue>9.07418e-06</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>12</Hsp_hit-from>
      <Hsp_hit-to>69</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>18</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>KVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENY-TASFEIEKQRIELNMWDTSGE</Hsp_qseq>
      <Hsp_hseq>KIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQ</Hsp_hseq>
      <Hsp_midline>K+V +G+   GKT+L+  F  D F + Y  T+  ++ + +  ++ + I L +WDT+G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YGR152C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:794674:795492:-1 gene:YGR152C transcript:YGR152C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSR1 description:GTP-binding protein of the Ras superfamily; required for bud site selection, morphological changes in response to mating pheromone, and efficient cell fusion; localized to the plasma membrane; significantly similar to mammalian Rap GTPases [Source:SGD;Acc:S000003384]</Hit_def>
  <Hit_accession>YGR152C</Hit_accession>
  <Hit_len>272</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>39.2762</Hsp_bit-score>
      <Hsp_score>90</Hsp_score>
      <Hsp_evalue>9.18591e-06</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>198</Hsp_query-to>
      <Hsp_hit-from>5</Hsp_hit-from>
      <Hsp_hit-to>62</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>19</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>KVVVIGDSQCGKTALLHVFAKDCFPEGYIPTVFENYTASFEIEKQRIELNMWDTSGEA</Hsp_qseq>
      <Hsp_hseq>KLVVLGAGGVGKSCLTVQFVQGVYLDTYDPTIEDSYRKTIEIDNKVFDLEILDTAGIA</Hsp_hseq>
      <Hsp_midline>K+VV+G    GK+ L   F +  + + Y PT+ ++Y  + EI+ +  +L + DT+G A</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>43</Statistics_hsp-len>
      <Statistics_eff-space>73647476</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>15</Iteration_iter-num>
  <Iteration_query-ID>Query_15</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052041-RA transcript Note:&quot;Similar to RND3 Rho-related GTP-binding protein RhoE (Pongo abelii)&quot; offset:0 AED:0.06 eAED:0.06 QI:0|1|0.66|1|1|1|3|1585|196</Iteration_query-def>
  <Iteration_query-len>2176</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YPR165W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:875368:875997:1 gene:YPR165W transcript:YPR165W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO1 description:GTP-binding protein of the rho subfamily of Ras-like proteins; involved in establishment of cell polarity; regulates protein kinase C (Pkc1p) and the cell wall synthesizing enzyme 1,3-beta-glucan synthase (Fks1p and Gsc2p) [Source:SGD;Acc:S000006369]</Hit_def>
  <Hit_accession>YPR165W</Hit_accession>
  <Hit_len>209</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>89.7373</Hsp_bit-score>
      <Hsp_score>221</Hsp_score>
      <Hsp_evalue>6.53337e-21</Hsp_evalue>
      <Hsp_query-from>76</Hsp_query-from>
      <Hsp_query-to>429</Hsp_query-to>
      <Hsp_hit-from>67</Hsp_hit-from>
      <Hsp_hit-to>184</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>54</Hsp_identity>
      <Hsp_positive>77</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>119</Hsp_align-len>
      <Hsp_qseq>GSPYYDNVRPLAYSDSDVVLICFDVGRPETLDSTLKKWQAESQEF-SSSKVLLIGCKADLRVDLATLLELSKQRRIPVTQEXXXXXXXXXXXXXYVECSAKLSENSVRDVFHMATLAAL</Hsp_qseq>
      <Hsp_hseq>GQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAK-TGYGVREVFEAATRASL</Hsp_hseq>
      <Hsp_midline>G   YD +RPL+Y DS+VVLICF +  P++L++  +KW AE   F     ++L+GCK DLR D  T+ +L ++ + PVT ++G   A Q+GA  Y ECSAK +   VR+VF  AT A+L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YLR229C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:604212:604787:-1 gene:YLR229C transcript:YLR229C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDC42 description:Small rho-like GTPase; essential for establishment and maintenance of cell polarity; plays a role late in cell fusion via activation of key cell fusion regulator Fus2p; mutants have defects in the organization of actin and septins; human homolog CDC42 can complement yeast cdc42 mutant [Source:SGD;Acc:S000004219]</Hit_def>
  <Hit_accession>YLR229C</Hit_accession>
  <Hit_len>191</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>73.559</Hsp_bit-score>
      <Hsp_score>179</Hsp_score>
      <Hsp_evalue>1.87542e-15</Hsp_evalue>
      <Hsp_query-from>76</Hsp_query-from>
      <Hsp_query-to>429</Hsp_query-to>
      <Hsp_hit-from>60</Hsp_hit-from>
      <Hsp_hit-to>177</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>48</Hsp_identity>
      <Hsp_positive>71</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>119</Hsp_align-len>
      <Hsp_qseq>GSPYYDNVRPLAYSDSDVVLICFDVGRPETLDSTLKKWQAESQEF-SSSKVLLIGCKADLRVDLATLLELSKQRRIPVTQEXXXXXXXXXXXXXYVECSAKLSENSVRDVFHMATLAAL</Hsp_qseq>
      <Hsp_hseq>GQEDYDRLRPLSYPSTDVFLVCFSVISPPSFENVKEKWFPEVHHHCPGVPCLVVGTQIDLRDDKVIIEKLQRQRLRPITSEQGSRLARELKAVKYVECSA-LTQRGLKNVFDEAIVAAL</Hsp_hseq>
      <Hsp_midline>G   YD +RPL+Y  +DV L+CF V  P + ++  +KW  E          L++G + DLR D   + +L +QR  P+T EQG+  AR+L A  YVECSA L++  +++VF  A +AAL</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YNL180C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:299654:300649:-1 gene:YNL180C transcript:YNL180C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO5 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; RAC1 ortholog; regulated by phosphorylation and ubiquitination; likely involved in protein kinase C (Pkc1p)-dependent signal transduction pathway that controls cell integrity [Source:SGD;Acc:S000005124]</Hit_def>
  <Hit_accession>YNL180C</Hit_accession>
  <Hit_len>331</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>63.1586</Hsp_bit-score>
      <Hsp_score>152</Hsp_score>
      <Hsp_evalue>3.72008e-11</Hsp_evalue>
      <Hsp_query-from>76</Hsp_query-from>
      <Hsp_query-to>429</Hsp_query-to>
      <Hsp_hit-from>90</Hsp_hit-from>
      <Hsp_hit-to>218</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>66</Hsp_positive>
      <Hsp_gaps>13</Hsp_gaps>
      <Hsp_align-len>130</Hsp_align-len>
      <Hsp_qseq>GSPYYDNVRPLAYSDSDVVLICFDVGRPETLDSTLKKWQAESQEFSSSK------------VLLIGCKADLRVDLATLLELSKQRRIPVTQEXXXXXXXXXXXXXYVECSAKLSENSVRDVFHMATLAAL</Hsp_qseq>
      <Hsp_hseq>GQEDYDRLRPLCYPQTDIFLICFSVSEHASFANVTEKWLPELKQTSNIEGTSLYTKLGKYPILLVGTKSDLRDDPATQKKLQEANSDYVSQEEIDELVQRCGFMGYTECSA-ATQAGVREVFEQAVRYAI</Hsp_hseq>
      <Hsp_midline>G   YD +RPL Y  +D+ LICF V    +  +  +KW  E ++ S+ +            +LL+G K+DLR D AT  +L +     V+QE+     ++ G   Y ECSA  ++  VR+VF  A   A+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YNL090W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:456565:457143:1 gene:YNL090W transcript:YNL090W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO2 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity and in microtubule assembly [Source:SGD;Acc:S000005034]</Hit_def>
  <Hit_accession>YNL090W</Hit_accession>
  <Hit_len>192</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>59.6918</Hsp_bit-score>
      <Hsp_score>143</Hsp_score>
      <Hsp_evalue>1.16693e-10</Hsp_evalue>
      <Hsp_query-from>76</Hsp_query-from>
      <Hsp_query-to>429</Hsp_query-to>
      <Hsp_hit-from>64</Hsp_hit-from>
      <Hsp_hit-to>178</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>66</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>119</Hsp_align-len>
      <Hsp_qseq>GSPYYDNVRPLAYSDSDVVLICFDVGRPETLDSTLKKWQAESQEF-SSSKVLLIGCKADLRVDLATLLELSKQRRIPVTQEXXXXXXXXXXXXXYVECSAKLSENSVRDVFHMATLAAL</Hsp_qseq>
      <Hsp_hseq>GQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQE-AHFKENATDEMVPI--EDAKQVARAIGAKKYMECSA-LTGEGVDDVFEVATRTSL</Hsp_hseq>
      <Hsp_midline>G   Y+ +RP +YS +D++LI F V   E+L +   KW  E+  +   + ++L+G K DLR + A   E +    +P+  E     AR +GA  Y+ECSA L+   V DVF +AT  +L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YKR055W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:548216:549091:1 gene:YKR055W transcript:YKR055W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO4 description:Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi [Source:SGD;Acc:S000001763]</Hit_def>
  <Hit_accession>YKR055W</Hit_accession>
  <Hit_len>291</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.9954</Hsp_bit-score>
      <Hsp_score>136</Hsp_score>
      <Hsp_evalue>2.50357e-09</Hsp_evalue>
      <Hsp_query-from>76</Hsp_query-from>
      <Hsp_query-to>459</Hsp_query-to>
      <Hsp_hit-from>130</Hsp_hit-from>
      <Hsp_hit-to>255</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>44</Hsp_identity>
      <Hsp_positive>74</Hsp_positive>
      <Hsp_gaps>20</Hsp_gaps>
      <Hsp_align-len>137</Hsp_align-len>
      <Hsp_qseq>GSPYYDNVRPLAYSDSDVVLICFDVGRPETLDSTLKKWQAESQEF-SSSKVLLIGCKADLRV--DLATLLELSKQRRIPVTQEXXXXXXXXXXXXXYVECSAKLSENSVRDVFHMATLAALG------RLPRHLLKR</Hsp_qseq>
      <Hsp_hseq>GQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDLYEADNLSDLVEPSSAESL----------AKRLGAFAHIQCSARLKEN-IDEVFETAIHTLLSDSLYAPREPTHTIKN</Hsp_hseq>
      <Hsp_midline>G   Y  +RPL+Y+++DV+++C+ VG   +L +    W  E + F  S+ ++L+G K+DL    +L+ L+E S    +          A++LGA A+++CSA+L EN + +VF  A    L       R P H +K </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YML064C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:145139:145876:-1 gene:YML064C transcript:YML064C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEM1 description:GTP-binding protein of the Ras superfamily; involved in termination of M-phase; controls actomyosin and septin dynamics during cytokinesis [Source:SGD;Acc:S000004529]</Hit_def>
  <Hit_accession>YML064C</Hit_accession>
  <Hit_len>245</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>1.63104e-06</Hsp_evalue>
      <Hsp_query-from>76</Hsp_query-from>
      <Hsp_query-to>264</Hsp_query-to>
      <Hsp_hit-from>78</Hsp_hit-from>
      <Hsp_hit-to>140</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>40</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>64</Hsp_align-len>
      <Hsp_qseq>GSPYYDNVRPLAYSDSDVVLICFDVGRPETLDSTLKKWQAESQEFSSSKV-LLIGCKADLRVDL</Hsp_qseq>
      <Hsp_hseq>GQREFINMLPIATVGSSVIIFLFDLTRPETL-SSIKEWYRQAYGLNDSAIPILVGTKYDLLIDL</Hsp_hseq>
      <Hsp_midline>G   + N+ P+A   S V++  FD+ RPETL S++K+W  ++   + S + +L+G K DL +DL</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YIL118W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:139752:140447:1 gene:YIL118W transcript:YIL118W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO3 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p [Source:SGD;Acc:S000001380]</Hit_def>
  <Hit_accession>YIL118W</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.2098</Hsp_bit-score>
      <Hsp_score>108</Hsp_score>
      <Hsp_evalue>6.8387e-06</Hsp_evalue>
      <Hsp_query-from>76</Hsp_query-from>
      <Hsp_query-to>441</Hsp_query-to>
      <Hsp_hit-from>73</Hsp_hit-from>
      <Hsp_hit-to>215</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>67</Hsp_positive>
      <Hsp_gaps>23</Hsp_gaps>
      <Hsp_align-len>144</Hsp_align-len>
      <Hsp_qseq>GSPYYDNVRPLAYSDSDVVLICFDVGRPETLDSTLKKWQAE-SQEFSSSKVLLIGCKADLR---------------------VDLATLLELSKQRRIPVTQEXXXXXXXXXXXXXYVECSAKLSENSVRDVFHMATLAALGRLP</Hsp_qseq>
      <Hsp_hseq>GQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITPNNIQQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECSAKLNK-GVNEAFTEAARVALTAGP</Hsp_hseq>
      <Hsp_midline>G   +D +R L+YSD+  +++CF +   ++L++   KW  E +      K++L+  K DLR                      D    +  +   +  ++ E+G   A+++GA  Y+ECSAKL++  V + F  A   AL   P</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>97</Statistics_hsp-len>
      <Statistics_eff-space>1427988476</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>16</Iteration_iter-num>
  <Iteration_query-ID>Query_16</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052042-RA transcript Note:&quot;Similar to LYPD6 Ly6/PLAUR domain-containing protein 6 (Homo sapiens)&quot; offset:0 AED:0.40 eAED:0.40 QI:0|0.75|0.6|0.8|1|1|5|1215|260</Iteration_query-def>
  <Iteration_query-len>1998</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1299866190</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>17</Iteration_iter-num>
  <Iteration_query-ID>Query_17</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052043-RA transcript Note:&quot;Similar to PFKM ATP-dependent 6-phosphofructokinase, muscle type (Canis lupus familiaris)&quot; offset:698 AED:0.32 eAED:0.32 QI:698|0.26|0.29|0.91|0.86|0.83|24|0|824</Iteration_query-def>
  <Iteration_query-len>3173</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YMR205C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:671887:674766:-1 gene:YMR205C transcript:YMR205C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PFK2 description:Beta subunit of heterooctameric phosphofructokinase; involved in glycolysis; indispensable for anaerobic growth; activated by fructose-2,6-bisphosphate and AMP; mutation inhibits glucose induction of cell cycle-related genes [Source:SGD;Acc:S000004818]</Hit_def>
  <Hit_accession>YMR205C</Hit_accession>
  <Hit_len>959</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>368.237</Hsp_bit-score>
      <Hsp_score>944</Hsp_score>
      <Hsp_evalue>8.29439e-112</Hsp_evalue>
      <Hsp_query-from>1152</Hsp_query-from>
      <Hsp_query-to>2681</Hsp_query-to>
      <Hsp_hit-from>162</Hsp_hit-from>
      <Hsp_hit-to>817</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>232</Hsp_identity>
      <Hsp_positive>342</Hsp_positive>
      <Hsp_gaps>158</Hsp_gaps>
      <Hsp_align-len>662</Hsp_align-len>
      <Hsp_qseq>EKGLVVKPHSQGQGNHLLSSTRPIATATMDKKLLENISASGRSIGVLTSGGDAQGMNAAVRAVVRMGIYVGAKVYFIYEG---------------------------GTAIGSARCMDFREHAGRLKAAHNLLKCSITNLCVIGGDGSLTGANLFREEWSGLLAELVKAGKITAEVAKKNSHLNIVGMVGSIDNDFCGTDMTIGTDSALHRIMEVVDAITTTAQR---------------YLALVTGLTCGADFVFLPEMPPADG-WEDQLC------------------------ATLT--------EMVTKRLGFDTRVTVLGHVQRGGTPSAFDRILASRMGVEAVLALLDASPETPACVVSLSGNQAVRLPLMECVQMTGFV-----------------------------------------------LGVLCVGAPAAGMNAAVRSAVRVGIMEGHKVFVVHDGFEGLGKGE-IEEFXXXXXXXXXXXXXANLGTKR-RPR-------------------------QAMEGAMQLASGRGQHEELCIPMCVIPATISNNVPGTDFSIGADTALNTIVETCDRIKQSASGTKHRVFVIETMGGHCGYLATMSGLAAGADAAYIFEETVTIHDLQANVQHLT---DKMKGSVRRGLII</Hsp_qseq>
      <Hsp_hseq>ESGLSSKVHSYTDLAYRMKTTDTYPS------LPKPLNRPQKAIAVMTSGGDAPGMNSNVRAIVRSAIFKGCRAFVVMEGYEGLVRGGPEYIKEFHWEDVRGWSAEGGTNIGTARCMEFKKREGRLLGAQHLIEAGVDALIVCGGDGSLTGADLFRSEWPSLIEELLKTNRISNEQYERMKHLNICGTVGSIDNDMSTTDATIGAYSALDRICKAIDYVEATANSHSRAFVVEVMGRNCGWLALLAGIATSADYIFIPEKPATSSEWQDQMCDIVSKHRSRGKRTTIVVVAEGAIAADLTPISPSDVHKVLVDRLGLDTRITTLGHVQRGGTAVAYDRILATLQGLEAVNAVLESTPDTPSPLIAVNENKIVRKPLMESVKLTKAVAEAIQAKDFKRAMSLRDTEFIEHLNNFMAINSADHNEPKLPKDKRLKIAIVNVGAPAGGINSAVYSMATYCMSQGHRPYAIYNGWSGLARHESVRSLNWKDMLGWQSRGGSEIGTNRVTPEEADLGMIAYYFQKYEFDGLIIVGGFEAFESLHQLERARESYPAFRIPMVLIPATLSNNVPGTEYSLGSDTALNALMEYCDVVKQSASSTRGRAFVVDCQGGNSGYLATYASLAVGAQVSYVPEEGISLEQLSEDIEYLAQSFEKAEGRGRFGKLI</Hsp_hseq>
      <Hsp_midline>E GL  K HS     + + +T    +      L + ++   ++I V+TSGGDA GMN+ VRA+VR  I+ G + + + EG                           GT IG+ARCM+F++  GRL  A +L++  +  L V GGDGSLTGA+LFR EW  L+ EL+K  +I+ E  ++  HLNI G VGSIDND   TD TIG  SAL RI + +D +  TA                 +LAL+ G+   AD++F+PE P     W+DQ+C                        A LT        +++  RLG DTR+T LGHVQRGGT  A+DRILA+  G+EAV A+L+++P+TP+ +++++ N+ VR PLME V++T  V                                               + ++ VGAPA G+N+AV S     + +GH+ + +++G+ GL + E +    W D+ GW  +GG+ +GT R  P                          +A E   QL   R  +    IPM +IPAT+SNNVPGT++S+G+DTALN ++E CD +KQSAS T+ R FV++  GG+ GYLAT + LA GA  +Y+ EE +++  L  ++++L    +K +G  R G +I</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YGR240C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:970771:973734:-1 gene:YGR240C transcript:YGR240C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PFK1 description:Alpha subunit of heterooctameric phosphofructokinase; involved in glycolysis, indispensable for anaerobic growth, activated by fructose-2,6-bisphosphate and AMP, mutation inhibits glucose induction of cell cycle-related genes [Source:SGD;Acc:S000003472]</Hit_def>
  <Hit_accession>YGR240C</Hit_accession>
  <Hit_len>987</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>365.54</Hsp_bit-score>
      <Hsp_score>937</Hsp_score>
      <Hsp_evalue>1.43842e-110</Hsp_evalue>
      <Hsp_query-from>1263</Hsp_query-from>
      <Hsp_query-to>2738</Hsp_query-to>
      <Hsp_hit-from>202</Hsp_hit-from>
      <Hsp_hit-to>843</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>241</Hsp_identity>
      <Hsp_positive>335</Hsp_positive>
      <Hsp_gaps>150</Hsp_gaps>
      <Hsp_align-len>642</Hsp_align-len>
      <Hsp_qseq>SASGRSIGVLTSGGDAQGMNAAVRAVVRMGIYVGAKVYFIYEG--------------------------GTAIGSARCMDFREHAGRLKAAHNLLKCSITNLCVIGGDGSLTGANLFREEWSGLLAELVKAGKITAEVAKKNSHLNIVGMVGSIDNDFCGTDMTIGTDSALHRIMEVVDAITTTAQR---------------YLALVTGLTCGADFVFLPEMP-PADGWEDQLCATLTEMVTK-------------------------------RLGFDTRVTVLGHVQRGGTPSAFDRILASRMGVEAVLALLDASPETPACVVSLSGNQAVRLPLMECVQMTGFV-----------------------------------------------LGVLCVGAPAAGMNAAVRSAVRVGIMEGHKVFVVHDGFEGLGK-GEIEEFXXXXXXXXXXXXXANLGTKRR-------------PRQAMEGAM------------QLASGRGQHEELCIPMCVIPATISNNVPGTDFSIGADTALNTIVETCDRIKQSASGTKHRVFVIETMGGHCGYLATMSGLAAGADAAYIFEETVTIHDLQANVQHLTDKM---KGSVRRG-LIIRNEKCNANYTTDFIYNLYT</Hsp_qseq>
      <Hsp_hseq>SQKKKKIAVMTSGGDSPGMNAAVRAVVRTGIHFGCDVFAVYEGYEGLLRGGKYLKKMAWEDVRGWLSEGGTLIGTARSMEFRKREGRRQAAGNLISQGIDALVVCGGDGSLTGADLFRHEWPSLVDELVAEGRFTKEEVAPYKNLSIVGLVGSIDNDMSGTDSTIGAYSALERICEMVDYIDATAKSHSRAFVVEVMGRHCGWLALMAGIATGADYIFIPERAVPHGKWQDELKEVCQRHRSKGRRNNTIIVAEGALDDQLNPVTANDVKDALIELGLDTKVTILGHVQRGGTAVAHDRWLATLQGVDAVKAVLEFTPETPSPLIGILENKIIRMPLVESVKLTKSVATAIENKDFDKAISLRDTEFIELYENFLSTTVKDDGSELLPVSDRLNIGIVHVGAPSAALNAATRAATLYCLSHGHKPYAIMNGFSGLIQTGEVKELSWIDVENWHNLGGSEIGTNRSVASEDLGTIAYYFQKNKLDGLIILGGFEGFRSLKQLRDGRTQHPIFNIPMCLIPATVSNNVPGTEYSLGVDTCLNALVNYTDDIKQSASATRRRVFVCEVQGGHSGYIASFTGLITGAVSVYTPEKKIDLASIREDITLLKENFRHDKGENRNGKLLVRNEQASSVYSTQLLADIIS</Hsp_hseq>
      <Hsp_midline>S   + I V+TSGGD+ GMNAAVRAVVR GI+ G  V+ +YEG                          GT IG+AR M+FR+  GR +AA NL+   I  L V GGDGSLTGA+LFR EW  L+ ELV  G+ T E      +L+IVG+VGSIDND  GTD TIG  SAL RI E+VD I  TA+                +LAL+ G+  GAD++F+PE   P   W+D+L        +K                                LG DT+VT+LGHVQRGGT  A DR LA+  GV+AV A+L+ +PETP+ ++ +  N+ +R+PL+E V++T  V                                               +G++ VGAP+A +NAA R+A    +  GHK + + +GF GL + GE++E +W DV  W   GG+ +GT R               +  ++G +            QL  GR QH    IPMC+IPAT+SNNVPGT++S+G DT LN +V   D IKQSAS T+ RVFV E  GGH GY+A+ +GL  GA + Y  E+ + +  ++ ++  L +     KG  R G L++RNE+ ++ Y+T  + ++ +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>100</Statistics_hsp-len>
      <Statistics_eff-space>2157142119</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>18</Iteration_iter-num>
  <Iteration_query-ID>Query_18</Iteration_query-ID>
  <Iteration_query-def>PMZ_0041409-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0|0.5|2|0|109</Iteration_query-def>
  <Iteration_query-len>330</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>76</Statistics_hsp-len>
      <Statistics_eff-space>82023878</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>19</Iteration_iter-num>
  <Iteration_query-ID>Query_19</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052045-RA transcript Note:&quot;Similar to Glcci1 Glucocorticoid-induced transcript 1 protein (Mus musculus)&quot; offset:244 AED:0.26 eAED:0.26 QI:244|0.66|0.57|0.85|0.66|0.71|7|0|584</Iteration_query-def>
  <Iteration_query-len>1999</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1299866190</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>20</Iteration_iter-num>
  <Iteration_query-ID>Query_20</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052048-RA transcript Note:&quot;Similar to C1GALT1 Glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1 (Gallus gallus)&quot; offset:478 AED:0.04 eAED:0.04 QI:478|1|1|1|0.5|0.2|5|2536|363</Iteration_query-def>
  <Iteration_query-len>4106</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>102</Statistics_hsp-len>
      <Statistics_eff-space>2836937622</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>

