<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
  <BlastOutput_program>blastx</BlastOutput_program>
  <BlastOutput_version>BLASTX 2.10.0+</BlastOutput_version>
  <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
  <BlastOutput_db>/home/smr/dbs/ensembl/release-100/Saccharomyces_cerevisiae.R64-1-1.pep.all.fa</BlastOutput_db>
  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
  <BlastOutput_query-def>PMZ_0053112-RA transcript Note:&quot;Similar to TRAM1 Translocating chain-associated membrane protein 1 (Bos taurus)&quot; offset:277 AED:0.06 eAED:0.06 QI:277|0.57|0.75|0.87|0.71|0.87|8|2608|256</BlastOutput_query-def>
  <BlastOutput_query-len>3656</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_matrix>BLOSUM62</Parameters_matrix>
      <Parameters_expect>1e-05</Parameters_expect>
      <Parameters_gap-open>11</Parameters_gap-open>
      <Parameters_gap-extend>1</Parameters_gap-extend>
      <Parameters_filter>L;</Parameters_filter>
    </Parameters>
  </BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
  <Iteration_iter-num>1</Iteration_iter-num>
  <Iteration_query-ID>Query_1</Iteration_query-ID>
  <Iteration_query-def>PMZ_0053112-RA transcript Note:&quot;Similar to TRAM1 Translocating chain-associated membrane protein 1 (Bos taurus)&quot; offset:277 AED:0.06 eAED:0.06 QI:277|0.57|0.75|0.87|0.71|0.87|8|2608|256</Iteration_query-def>
  <Iteration_query-len>3656</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>101</Statistics_hsp-len>
      <Statistics_eff-space>2510420639</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>2</Iteration_iter-num>
  <Iteration_query-ID>Query_2</Iteration_query-ID>
  <Iteration_query-def>PMZ_0053116-RA transcript Note:&quot;Similar to Usp36 Ubiquitin carboxyl-terminal hydrolase 36 (Mus musculus)&quot; offset:0 AED:0.43 eAED:0.45 QI:0|0.66|0.68|0.87|0.93|0.93|16|0|699</Iteration_query-def>
  <Iteration_query-len>2100</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YMR223W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:716715:718130:1 gene:YMR223W transcript:YMR223W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBP8 description:Ubiquitin-specific protease component of the SAGA acetylation complex; required for SAGA (Spt-Ada-Gcn5-Acetyltransferase)-mediated deubiquitination of histone H2B [Source:SGD;Acc:S000004836]</Hit_def>
  <Hit_accession>YMR223W</Hit_accession>
  <Hit_len>471</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>128.642</Hsp_bit-score>
      <Hsp_score>322</Hsp_score>
      <Hsp_evalue>4.2933e-32</Hsp_evalue>
      <Hsp_query-from>889</Hsp_query-from>
      <Hsp_query-to>1722</Hsp_query-to>
      <Hsp_hit-from>137</Hsp_hit-from>
      <Hsp_hit-to>465</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>94</Hsp_identity>
      <Hsp_positive>159</Hsp_positive>
      <Hsp_gaps>53</Hsp_gaps>
      <Hsp_align-len>330</Hsp_align-len>
      <Hsp_qseq>AGLRNLGNTCFLNATLQCLAYTPPLANYLLLQEHCSTCQQS--DFCLMCVMERHIVSTFN--NSKRVLTPKAITKNIT----------RIAKHLRIGRQEDAHEFLRYVVDAMQASC---LHGHSELDRYT--EATTLIYQIFGGYLRS-------RESS------FAFHSVGQQNSSDLVEAFEEFFNKETLDE--YTCRMCCCKGEATKTMALHRLPNVLTVSIKRYNLYGN---------ITYPEHLDMQPFTSTSQGEP---------AIYSLYSVLVHKGADSNSGHYYCYNKISDGQWCCMNDSIVRHVDTKAVMNEQAYMLFY</Hsp_qseq>
      <Hsp_hseq>SGLINMGSTCFMSSILQCLIHNPYFIRHSMSQIHSNNCKVRSPDKCFSCALDKIVHELYGALNTKQASSSSTSTNRQTGFIYLLTCAWKINQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCECIVHTVFEGSLESSIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQLKDFNYHCGECNSTQDAIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENGKVPDIIYELIGIVSHKGT-VNEGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLLFY</Hsp_hseq>
      <Hsp_midline>+GL N+G+TCF+++ LQCL + P    + + Q H + C+    D C  C +++ +   +   N+K+  +    T   T          +I ++L    Q+DAHEF +++++ +  S    L    E+ R    +   +++ +F G L S       + +S      F   S+  ++   L E  + F  KE L +  Y C  C    +A K + +H+LP+VL + +KR+    N         I +P +L+M+ + ST + +           IY L  ++ HKG   N GHY  + KIS GQW   NDS+V  +  + V+ EQAY+LFY</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YER144C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:457806:460223:-1 gene:YER144C transcript:YER144C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBP5 description:Putative ubiquitin-specific protease; concentrates at the bud neck; UBP5 has a paralog, DOA4, that arose from the whole genome duplication [Source:SGD;Acc:S000000946]</Hit_def>
  <Hit_accession>YER144C</Hit_accession>
  <Hit_len>805</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>72.7886</Hsp_bit-score>
      <Hsp_score>177</Hsp_score>
      <Hsp_evalue>1.09399e-13</Hsp_evalue>
      <Hsp_query-from>754</Hsp_query-from>
      <Hsp_query-to>1728</Hsp_query-to>
      <Hsp_hit-from>409</Hsp_hit-from>
      <Hsp_hit-to>803</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>93</Hsp_identity>
      <Hsp_positive>157</Hsp_positive>
      <Hsp_gaps>90</Hsp_gaps>
      <Hsp_align-len>405</Hsp_align-len>
      <Hsp_qseq>PATKNIGVSVLPAPQEEDDGIPAARLSLFAPERLSLRWENDVGKGAGLRNLGNTCFLNATLQCLAYTPPLANYLLLQEHCSTCQ-QSDFCLMCVMERHIVSTFNNSKR--VLTPKAI------TKNITRIAKHLR----IGRQEDAHEFLRYVVDAMQASCLHGHS---------ELDRYTEATTL------------------IYQIFGGYLRSR------------ESSFAFHSVG--QQNSSDLVEAFEEFFNKETL---DEYTCRMCCCKGEATKTMALHRLPNVLTVSIKRYNLYGN-----ITYPEHLDMQPFTSTSQGEPAI---------------YSLYSVLVHKGADSNSGHY--YCYNKISDGQWCCMNDSIVRHVD-TKAVMNEQAYMLFYIR</Hsp_qseq>
      <Hsp_hseq>PASNVFSPRIPPLPQQ---NLSSSRQTILNNSQVL-----DLDLIVGLENIGNCCYMNCILQCLVGTHDLVRMFLDNTYLNFINFDSSRGSKGLLAKNFAILVNNMHRHGAFTPPNVRTIPVQTIQFKKICGHINPMYSDSMQQDCQEFCQFLLDGLHEDLNQNGSKKHLKQLSDEEERMREKMSIRKASALEWERFLLTDFSAIIDLFQGQYASRLQCQVCEHTSTTYQTFSVLSVPVPRVKTCNILDCFREFTKCERLGVDEQWSCPKCLKKQPSTKQLKITRLPKKLIINLKRFDNQMNKNNVFVQYPYSLDLTPYWARDFNHEAIVNEDIPTRGQVPPFRYRLYGVACHSGS-LYGGHYTSYVYKGPKKG-WYFFDDSLYRPITFSTEFITPSAYVLFYER</Hsp_hseq>
      <Hsp_midline>PA+      + P PQ+    + ++R ++    ++      D+    GL N+GN C++N  LQCL  T  L    L   + +     S      ++ ++     NN  R    TP  +      T    +I  H+        Q+D  EF ++++D +        S         E +R  E  ++                  I  +F G   SR              +F+  SV   +  + ++++ F EF   E L   ++++C  C  K  +TK + + RLP  L +++KR++   N     + YP  LD+ P+ +      AI               Y LY V  H G+    GHY  Y Y     G W   +DS+ R +  +   +   AY+LFY R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YNL186W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:289498:291876:1 gene:YNL186W transcript:YNL186W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBP10 description:Ubiquitin-specific protease, deubiquitinates Ub-protein moieties; interacts with proteins that function in rRNA production and ribosome biogenesis via its intrinsically disordered regions; stabilizes Rpa190p by deubiquitination; controls PCNA deubiquitylation; may regulate silencing by acting on Sir4p; involved in posttranscriptionally regulating Gap1p, possibly other transporters; localized to the nucleolus; null mutant phenotypes are functionally complemented by human USP36 [Source:SGD;Acc:S000005130]</Hit_def>
  <Hit_accession>YNL186W</Hit_accession>
  <Hit_len>792</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>71.2478</Hsp_bit-score>
      <Hsp_score>173</Hsp_score>
      <Hsp_evalue>3.01587e-13</Hsp_evalue>
      <Hsp_query-from>1330</Hsp_query-from>
      <Hsp_query-to>1728</Hsp_query-to>
      <Hsp_hit-from>586</Hsp_hit-from>
      <Hsp_hit-to>732</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>44</Hsp_identity>
      <Hsp_positive>69</Hsp_positive>
      <Hsp_gaps>16</Hsp_gaps>
      <Hsp_align-len>148</Hsp_align-len>
      <Hsp_qseq>LVEAFEEFFNKETLD------EYTCRMCCCKGEATKTMALHRLPNVLTVSIKRYNLYGN--------ITYPEHLDMQPFTSTSQGEPAIYSLYSVLVHKGADSNSGHYYCYNKISDGQWCCMNDSIVRHVDTKAVMNE-QAYMLFYIR</Hsp_qseq>
      <Hsp_hseq>IEKSIKDFFNPELIKVDKEQKGYVCEKCHKTTNAVKHSSILRAPETLLVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEYCE-SKELPVKYQLLSVVVHEGRSLSSGHYIAHCKQPDGSWATYDDEYINIISERDVLKEPNAYYLLYTR</Hsp_hseq>
      <Hsp_midline>+ ++ ++FFN E +        Y C  C     A K  ++ R P  L V +K++   G         ++YP  LD+  +   S+  P  Y L SV+VH+G   +SGHY  + K  DG W   +D  +  +  + V+ E  AY L Y R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>51.2174</Hsp_bit-score>
      <Hsp_score>121</Hsp_score>
      <Hsp_evalue>4.47823e-07</Hsp_evalue>
      <Hsp_query-from>892</Hsp_query-from>
      <Hsp_query-to>1275</Hsp_query-to>
      <Hsp_hit-from>363</Hsp_hit-from>
      <Hsp_hit-to>495</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>35</Hsp_identity>
      <Hsp_positive>68</Hsp_positive>
      <Hsp_gaps>17</Hsp_gaps>
      <Hsp_align-len>139</Hsp_align-len>
      <Hsp_qseq>GLRNLGNTCFLNATLQCLAYTPPLANYL---LLQEHCSTCQQS--DFCLMCVMERHIVSTFNNSKR-----VLTPKAITKNITRIAKHLRIGRQEDAHEFLRYVVDAMQASCL-HGHSELDRYTEATTLIYQIFGGYLR</Hsp_qseq>
      <Hsp_hseq>GLLNHGVTCYTNAAVQAMLHIPSIQHYLFDILMGKYDSTISKNSVSYTLAETSKKMWLPVSKNPRKNVSASYINPKHLISRLDDINCMMSEWQQEDSHEYFMSLMSRLQEDSVPKGHKLIE------SIIYDIFGGLLK</Hsp_hseq>
      <Hsp_midline>GL N G TC+ NA +Q + + P + +YL   L+ ++ ST  ++   + L    ++  +    N ++      + PK +   +  I   +   +QED+HE+   ++  +Q   +  GH  ++      ++IY IFGG L+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YDR069C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:584939:587719:-1 gene:YDR069C transcript:YDR069C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DOA4 description:Ubiquitin hydrolase; deubiquitinates intralumenal vesicle (ILVs) cargo proteins; required for recycling ubiquitin from proteasome-bound ubiquitinated intermediates, acts at the late endosome/prevacuolar compartment to recover ubiquitin from ubiquitinated membrane proteins destined for the vacuole; DOA4 has a paralog, UBP5, that arose from the whole genome duplication [Source:SGD;Acc:S000002476]</Hit_def>
  <Hit_accession>YDR069C</Hit_accession>
  <Hit_len>926</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>67.781</Hsp_bit-score>
      <Hsp_score>164</Hsp_score>
      <Hsp_evalue>3.56594e-12</Hsp_evalue>
      <Hsp_query-from>874</Hsp_query-from>
      <Hsp_query-to>1728</Hsp_query-to>
      <Hsp_hit-from>557</Hsp_hit-from>
      <Hsp_hit-to>922</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>83</Hsp_identity>
      <Hsp_positive>137</Hsp_positive>
      <Hsp_gaps>85</Hsp_gaps>
      <Hsp_align-len>368</Hsp_align-len>
      <Hsp_qseq>DVGKGAGLRNLGNTCFLNATLQCLAYTPPLANYLLLQEHCSTCQ-QSDFCLMCVMERHIV--------STFNNSKRV-LTPKAITKNITRIAKHLRIGRQEDAHEFLRYVVDAMQASC--------------------------LHGHSELDRY-TEATTLIYQIFGGYLRSR------------ESSFAFHSV-----GQQNSSDLVEAFEEFF---NKETLDEYTCRMCCCKGEATKTMALHRLPNVLTVSIKRYNLYGN-----ITYPEHLDMQPFTSTS------------------QGEPAIYSLYSVLVHKGADSNSGHYYCYNK--ISDGQWCCMNDSIVRHVDTKA-VMNEQAYMLFYIR</Hsp_qseq>
      <Hsp_hseq>DLDFAVGLENLGNSCYMNCIIQCILGTHELTQIFLDDSYAKHININSKLGSKGILAKYFARLVHMMYKEQVDGSKKISISPIKFKLACGSVNSLFKTASQQDCQEFCQFLLDGLHEDLNQCGSNPPLKELSQEAEARREKLSLRIASSIEWERFLTTDFSVIVDLFQGQYASRLKCKVCSHTSTTYQPFTVLSIPIPKKNSRNNITIEDCFREFTKCENLEVDEQWLCPHCEKRQPSTKQLTITRLPRNLIVHLKRFDNLLNKNNDFVIYPFLLDLTPFWANDFDGVFPPGVNDDELPIRGQIPPFKYELYGVACHFGT-LYGGHYTAYVKKGLKKG-WLYFDDTKYKPVKNKADAINSNAYVLFYHR</Hsp_hseq>
      <Hsp_midline>D+    GL NLGN+C++N  +QC+  T  L    L   +       S      ++ ++             + SK++ ++P         +    +   Q+D  EF ++++D +                              +    E +R+ T   ++I  +F G   SR               F   S+       +N+  + + F EF    N E  +++ C  C  +  +TK + + RLP  L V +KR++   N     + YP  LD+ PF +                    Q  P  Y LY V  H G     GHY  Y K  +  G W   +D+  + V  KA  +N  AY+LFY R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YBL067C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:93639:95882:-1 gene:YBL067C transcript:YBL067C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBP13 description:Ubiquitin-specific protease that cleaves Ub-protein fusions; UBP13 has a paralog, UBP9, that arose from the whole genome duplication [Source:SGD;Acc:S000000163]</Hit_def>
  <Hit_accession>YBL067C</Hit_accession>
  <Hit_len>747</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>67.3958</Hsp_bit-score>
      <Hsp_score>163</Hsp_score>
      <Hsp_evalue>4.89777e-12</Hsp_evalue>
      <Hsp_query-from>1075</Hsp_query-from>
      <Hsp_query-to>1722</Hsp_query-to>
      <Hsp_hit-from>409</Hsp_hit-from>
      <Hsp_hit-to>665</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>62</Hsp_identity>
      <Hsp_positive>105</Hsp_positive>
      <Hsp_gaps>51</Hsp_gaps>
      <Hsp_align-len>262</Hsp_align-len>
      <Hsp_qseq>VLTPKAITKNITRIAKHLRIGRQEDAHEFLRYVVDAMQ-----------ASCLHGHSELDRYTEATTLIYQIFGGYLR------------SRESSFAFHSVGQQNS--SDLVEAFEEFFNKETLD---EYTCRMCCCKGEATKTMALHRLPNVLTVSIKRY----------NLYGNITYPEHLDMQPFTSTSQGEPAIYSLYSVLVHKGADSNSGHYYCYNKISDGQWCCMNDSIVRHVDTKAVMN--------EQAYMLFY</Hsp_qseq>
      <Hsp_hseq>VVSPSSFVDVLKRENVLFNTTMHQDAHEFFNFLLNELSEYIERENKKIAASDINSDSEP---SKSKNFISDLFQGTLTNQIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQEILKSYHQREMLNGSNKFYCDECCGLQEAERLVGLKQLPDTLTLHLKRFKYSEKQNCNIKLFNNIHYP--LTLNVCSSINSKVCQKYELAGIVVHMGGGPQHGHYVSLCKHEKFGWLLFDDETVEAVKEETVLEFTGESPNMATAYVLFY</Hsp_hseq>
      <Hsp_midline>V++P +    + R          +DAHEF  ++++ +            AS ++  SE    +++   I  +F G L             SR+  F    +  Q    +D+ E  + +  +E L+   ++ C  CC   EA + + L +LP+ LT+ +KR+           L+ NI YP  L +   +S +      Y L  ++VH G     GHY    K     W   +D  V  V  + V+           AY+LFY</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YER098W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:355466:357730:1 gene:YER098W transcript:YER098W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBP9 description:Ubiquitin-specific protease that cleaves ubiquitin-protein fusions; UBP9 has a paralog, UBP13, that arose from the whole genome duplication [Source:SGD;Acc:S000000900]</Hit_def>
  <Hit_accession>YER098W</Hit_accession>
  <Hit_len>754</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>62.7734</Hsp_bit-score>
      <Hsp_score>151</Hsp_score>
      <Hsp_evalue>1.076e-10</Hsp_evalue>
      <Hsp_query-from>1075</Hsp_query-from>
      <Hsp_query-to>1722</Hsp_query-to>
      <Hsp_hit-from>411</Hsp_hit-from>
      <Hsp_hit-to>664</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>58</Hsp_identity>
      <Hsp_positive>105</Hsp_positive>
      <Hsp_gaps>44</Hsp_gaps>
      <Hsp_align-len>257</Hsp_align-len>
      <Hsp_qseq>VLTPKAITKNITRIAKHLRIGRQEDAHEFLRYVVDAMQASCLHGHSELDRYTEATT------LIYQIFGGYLR------------SRESSFAFHSVGQQ--NSSDLVEAFEEFFNKETLD---EYTCRMCCCKGEATKTMALHRLPNVLTVSIKRYN----------LYGNITYPEHLDMQPFTSTSQGEPAIYSLYSVLVHKGADSNSGHYYCYNKISDGQWCCMNDSIVRHVDTKAVM--------NEQAYMLFY</Hsp_qseq>
      <Hsp_hseq>IVSPTEFVKILKKENVLFNTMMQQDAHEFLNFLLNDFSEYIQRNNPRM-RFGPQKTDNSNDNFITDLFKGTLTNRIKCLTCDNITSRDEPFLDFPIEVQGDEETDIQKMLKSYHQREMLNGVNKFYCNKCYGLQEAERMVGLKQLPHILSLHLKRFKYSEEQKSNIKLFNKILYPLTLDVSSTFNTSVYKK--YELSGVVIHMGSGPQHGHYVCICRNEKFGWLLYDDETVESIKEETVLQFTGHPGDQTTAYVLFY</Hsp_hseq>
      <Hsp_midline>+++P    K + +         Q+DAHEFL ++++         +  + R+    T       I  +F G L             SR+  F    +  Q    +D+ +  + +  +E L+   ++ C  C    EA + + L +LP++L++ +KR+           L+  I YP  LD+    +TS  +   Y L  V++H G+    GHY C  +     W   +D  V  +  + V+           AY+LFY</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YMR304W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:874987:878679:1 gene:YMR304W transcript:YMR304W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBP15 description:Ubiquitin-specific protease involved in protein deubiquitination; forms a complex with AAA peroxins Pex1p and Pex6p; deubiquitinates mono- and polyubiquitinated forms of Pex5p; deubiquitinates Clb5p, counteracting APC activity, and facilitating both Clb5p accumulation and S phase entry; physically interacts with anaphase-promoting complex/cyclosome (APC/C) activator, Cdh1p; catalytic activity regulated by an N-terminal TRAF-like domain and and C-terminal sequences [Source:SGD;Acc:S000004920]</Hit_def>
  <Hit_accession>YMR304W</Hit_accession>
  <Hit_len>1230</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>61.2326</Hsp_bit-score>
      <Hsp_score>147</Hsp_score>
      <Hsp_evalue>3.78422e-10</Hsp_evalue>
      <Hsp_query-from>889</Hsp_query-from>
      <Hsp_query-to>1701</Hsp_query-to>
      <Hsp_hit-from>205</Hsp_hit-from>
      <Hsp_hit-to>497</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>74</Hsp_identity>
      <Hsp_positive>117</Hsp_positive>
      <Hsp_gaps>58</Hsp_gaps>
      <Hsp_align-len>311</Hsp_align-len>
      <Hsp_qseq>AGLRNLGNTCFLNATLQCLAYTPPLAN--YLLLQEHCSTCQQSDFCLMCVMERHIVSTFNNSKRVLTPKAITKNITRIAKHLRIGRQEDAHEFLRYVVDAMQASCLHGHSELDRYTEATTLIYQIFGGYLRS------------RESSFAFHSVGQQNSSDLVEAFEEFFNKETLD---EYTCRMCCCKGEATKTMALHRLPNVLTVSIKRYNLYGNIT----------YPEHLDMQPF-----------TSTSQGEPAIYSLYSVLVHKGADSNSGHYYCYNK--ISDGQWCCMNDSIVRHVDTKAVMNE</Hsp_qseq>
      <Hsp_hseq>VGFRNQGATCYLNSLLQSYFFTKYFRKLVYEIPTEHESPNNSVPLALQRAFYQLQVSDIPLDTLELTRSFGWDTAESFTQH-------DVQELNRILMDRLENNM--------KGTPVEGKLNEIFVGKMKSYIKCINVDYESARVEDFWDLQLNVKNFKNLQESFDNYIEMELMNGENQYAAQDYGLQ-DAQKGVIFESFPPVLHLQLKRFEYDFNYDQMVKVNDKYEFPETIDLSPFVDKDVLKKTLDSENKDKNPYVYNLHGVLVHSG-DISTGHYYTLIKPGVED-QWYRFDDERVWRVTKKQVFQE</Hsp_hseq>
      <Hsp_midline> G RN G TC+LN+ LQ   +T       Y +  EH S        L     +  VS        LT            +H       D  E  R ++D ++ +         + T     + +IF G ++S            R   F    +  +N  +L E+F+ +   E ++   +Y  +    + +A K +     P VL + +KR+    N            +PE +D+ PF           +      P +Y+L+ VLVH G D ++GHYY   K  + D QW   +D  V  V  K V  E</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YJL197W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:63805:67569:1 gene:YJL197W transcript:YJL197W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UBP12 description:Ubiquitin-specific protease; cleaves ubiquitin from ubiquitinated proteins; present in the nucleus and cytoplasm [Source:SGD;Acc:S000003733]</Hit_def>
  <Hit_accession>YJL197W</Hit_accession>
  <Hit_len>1254</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.521</Hsp_bit-score>
      <Hsp_score>114</Hsp_score>
      <Hsp_evalue>3.93716e-06</Hsp_evalue>
      <Hsp_query-from>1372</Hsp_query-from>
      <Hsp_query-to>1728</Hsp_query-to>
      <Hsp_hit-from>981</Hsp_hit-from>
      <Hsp_hit-to>1109</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>39</Hsp_identity>
      <Hsp_positive>61</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>131</Hsp_align-len>
      <Hsp_qseq>DEYTCRMCCCKGEATKTMALHRLPNVLTVSIKRY--------NLYGNITYP-EHLDMQPFTSTSQGEP--AIYSLYSVLVHKGADSNSGHYYCYNK-ISDGQWCCMNDSIVRHVDTKAVMNEQAYMLFYIR</Hsp_qseq>
      <Hsp_hseq>DSWYCPTCKEHRQATKQIQLWNTPDILLIHLKRFESQRSFSDKIDATVNFPITDLDLSRYV-VYKDDPRGLIYDLYAVDNHYGG-LGGGHYTAYVKNFADNKWYYFDDSRVTETAPENSIAGSAYLLFYIR</Hsp_hseq>
      <Hsp_midline>D + C  C    +ATK + L   P++L + +KR+         +   + +P   LD+  +    + +P   IY LY+V  H G     GHY  Y K  +D +W   +DS V     +  +   AY+LFYIR</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1377402068</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>3</Iteration_iter-num>
  <Iteration_query-ID>Query_3</Iteration_query-ID>
  <Iteration_query-def>PMZ_0063011-RA transcript Note:&quot;Similar to l1cam Neural cell adhesion molecule L1 (Takifugu rubripes)&quot; offset:0 AED:0.16 eAED:0.37 QI:0|0.57|0.62|1|0.85|0.75|8|375|421</Iteration_query-def>
  <Iteration_query-len>1641</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>94</Statistics_hsp-len>
      <Statistics_eff-space>1039031151</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>4</Iteration_iter-num>
  <Iteration_query-ID>Query_4</Iteration_query-ID>
  <Iteration_query-def>PMZ_0038417-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0|0.5|2|0|120</Iteration_query-def>
  <Iteration_query-len>363</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>78</Statistics_hsp-len>
      <Statistics_eff-space>103168481</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>5</Iteration_iter-num>
  <Iteration_query-ID>Query_5</Iteration_query-ID>
  <Iteration_query-def>PMZ_0063013-RA transcript Note:&quot;Similar to CCNB1IP1 E3 ubiquitin-protein ligase CCNB1IP1 (Homo sapiens)&quot; offset:0 AED:0.39 eAED:0.50 QI:0|0|0|1|1|1|3|0|166</Iteration_query-def>
  <Iteration_query-len>501</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>83</Statistics_hsp-len>
      <Statistics_eff-space>198766428</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>6</Iteration_iter-num>
  <Iteration_query-ID>Query_6</Iteration_query-ID>
  <Iteration_query-def>PMZ_0063014-RA transcript Note:&quot;Similar to CCNB1IP1 E3 ubiquitin-protein ligase CCNB1IP1 (Homo sapiens)&quot; offset:433 AED:0.56 eAED:0.59 QI:433|0.25|0.23|0.38|0.75|0.69|13|0|556</Iteration_query-def>
  <Iteration_query-len>2104</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1379682535</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>7</Iteration_iter-num>
  <Iteration_query-ID>Query_7</Iteration_query-ID>
  <Iteration_query-def>PMZ_0063181-RA transcript Note:&quot;Similar to ZNF583 Zinc finger protein 583 (Homo sapiens)&quot; offset:0 AED:0.31 eAED:0.35 QI:0|0|0|0.66|1|1|3|0|836</Iteration_query-def>
  <Iteration_query-len>2511</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YJL056C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:330431:333073:-1 gene:YJL056C transcript:YJL056C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZAP1 description:Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains [Source:SGD;Acc:S000003592]</Hit_def>
  <Hit_accession>YJL056C</Hit_accession>
  <Hit_len>880</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>122.094</Hsp_bit-score>
      <Hsp_score>305</Hsp_score>
      <Hsp_evalue>7.51042e-29</Hsp_evalue>
      <Hsp_query-from>1435</Hsp_query-from>
      <Hsp_query-to>1869</Hsp_query-to>
      <Hsp_hit-from>734</Hsp_hit-from>
      <Hsp_hit-to>879</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>60</Hsp_identity>
      <Hsp_positive>85</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>148</Hsp_align-len>
      <Hsp_qseq>GERPYACA--DCGRAFAVSGSLRKHRRTHTGERPYPCADCGRAFADSGTLHKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGER-PY</Hsp_qseq>
      <Hsp_hseq>GKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSFDDLGKLNSQKVKCALERKPY</Hsp_hseq>
      <Hsp_midline>G+  Y C   DC R F     L +H + H+  +PY C  C R F+   TL +H RTH+GE+P++C  C + F++  SL+ H RTHTGE+P  C  CG+RF +  NL KH +TH  ++ + C+DC + F D G L   +     ER PY</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>108.612</Hsp_bit-score>
      <Hsp_score>270</Hsp_score>
      <Hsp_evalue>1.26764e-24</Hsp_evalue>
      <Hsp_query-from>1399</Hsp_query-from>
      <Hsp_query-to>1779</Hsp_query-to>
      <Hsp_hit-from>752</Hsp_hit-from>
      <Hsp_hit-to>876</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>52</Hsp_identity>
      <Hsp_positive>74</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>127</Hsp_align-len>
      <Hsp_qseq>RGDLEKHRRTHTGERPYACADCGRAFAVSGSLRKHRRTHTGERPYPCADCGRAFADSGTLHKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGER</Hsp_qseq>
      <Hsp_hseq>RQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSFDDLGKLNSQKVKCALER</Hsp_hseq>
      <Hsp_midline>R  L +H + H+  +PY C  C R F+   +L +H RTH+GE+PY C  C + FA S +L  H RTHTGE+P +C  C + F+   +L KH +TH  ++ Y C+DC + F D G L   +   A ER</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>99.7525</Hsp_bit-score>
      <Hsp_score>247</Hsp_score>
      <Hsp_evalue>6.78655e-22</Hsp_evalue>
      <Hsp_query-from>1546</Hsp_query-from>
      <Hsp_query-to>2106</Hsp_query-to>
      <Hsp_hit-from>712</Hsp_hit-from>
      <Hsp_hit-to>880</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>59</Hsp_identity>
      <Hsp_positive>91</Hsp_positive>
      <Hsp_gaps>30</Hsp_gaps>
      <Hsp_align-len>193</Hsp_align-len>
      <Hsp_qseq>CGRAFADSGTLHKHRR-THT--GERPFECA--DCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHRRALHRIXXXXXXXXXXXXXXXASPPASARAVRCSVCSARFAGLGELRRHQESHAGQ-KPFV</Hsp_qseq>
      <Hsp_hseq>CNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIK------------------------THQKKYKCSDCSKSFDDLGKLNSQKVKCALERKPYL</Hsp_hseq>
      <Hsp_midline>C ++F+ +  L+ H    H   G+  ++C   DC R F     L +H + H+  +PY C  C R F+    L +H RTH+GE+P+ C  C ++FA   +L+ H RTHTGE+P  C  C + F ES  L +H +                           +  +CS CS  F  LG+L   +   A + KP++</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>93.5893</Hsp_bit-score>
      <Hsp_score>231</Hsp_score>
      <Hsp_evalue>4.51043e-20</Hsp_evalue>
      <Hsp_query-from>1357</Hsp_query-from>
      <Hsp_query-to>1701</Hsp_query-to>
      <Hsp_hit-from>766</Hsp_hit-from>
      <Hsp_hit-to>879</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>47</Hsp_identity>
      <Hsp_positive>68</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>116</Hsp_align-len>
      <Hsp_qseq>KRHRCRDCPYGTDHRGDLEKHRRTHTGERPYACADCGRAFAVSGSLRKHRRTHTGERPYPCADCGRAFADSGTLHKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGER-PY</Hsp_qseq>
      <Hsp_hseq>KPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSFDDLGKLNSQKVKCALERKPY</Hsp_hseq>
      <Hsp_midline>K ++C+ C         L +H RTH+GE+PY C  C + FA+S SL+ H RTHTGE+P  C  CG+ F +S  L KH +TH  ++ ++C+DC ++F   G L   +     ER PY</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>5</Hsp_num>
      <Hsp_bit-score>74.3294</Hsp_bit-score>
      <Hsp_score>181</Hsp_score>
      <Hsp_evalue>4.15314e-14</Hsp_evalue>
      <Hsp_query-from>1630</Hsp_query-from>
      <Hsp_query-to>2169</Hsp_query-to>
      <Hsp_hit-from>712</Hsp_hit-from>
      <Hsp_hit-to>846</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>49</Hsp_identity>
      <Hsp_positive>72</Hsp_positive>
      <Hsp_gaps>55</Hsp_gaps>
      <Hsp_align-len>185</Hsp_align-len>
      <Hsp_qseq>CRRAFSVPGSLRKHRR-THT--GERPYPCA--DCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHRRALHRIXXXXXXXXXXXXXXXASPPASARAVRCSVCSARFAGLGELRRHQESHAGQKPFVCTVCQGTFTRSTHLRRHQKGH</Hsp_qseq>
      <Hsp_hseq>CNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPY--------------------------------------------------KCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH</Hsp_hseq>
      <Hsp_midline>C ++FS    L  H    H   G+  Y C   DC R F  R  L +H + H+  +P+ C  C R F+    L +H RTH+GE+PY                                                  +C +C+ +FA    L+ H  +H G+KP  C +C   F  S++L +H K H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>6</Hsp_num>
      <Hsp_bit-score>48.521</Hsp_bit-score>
      <Hsp_score>114</Hsp_score>
      <Hsp_evalue>4.70281e-06</Hsp_evalue>
      <Hsp_query-from>1798</Hsp_query-from>
      <Hsp_query-to>2178</Hsp_query-to>
      <Hsp_hit-from>712</Hsp_hit-from>
      <Hsp_hit-to>821</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>53</Hsp_positive>
      <Hsp_gaps>27</Hsp_gaps>
      <Hsp_align-len>132</Hsp_align-len>
      <Hsp_qseq>CGRRFADRGNLRKHRR-THT--GERPYACA--DCPREFAESGQLGRHRRALHRIXXXXXXXXXXXXXXXASPPASARAVRCSVCSARFAGLGELRRHQESHAGQKPFVCTVCQGTFTRSTHLRRHQKGHTGE</Hsp_qseq>
      <Hsp_hseq>CNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKY----------------------KPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGE</Hsp_hseq>
      <Hsp_midline>C + F+    L  H    H   G+  Y C   DC R F +  +L RH +   +                       +  +C  C   F+    L +H  +H+G+KP+ C +C   F  S+ L+ H + HTGE</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YOR113W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:534075:536819:1 gene:YOR113W transcript:YOR113W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AZF1 description:Zinc-finger transcription factor; involved in diauxic shift; in the presence of glucose, activates transcription of genes involved in growth and carbon metabolism; in nonfermentable carbon sources, activates transcription of genes involved in maintenance of cell wall integrity; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005639]</Hit_def>
  <Hit_accession>YOR113W</Hit_accession>
  <Hit_len>914</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>95.5153</Hsp_bit-score>
      <Hsp_score>236</Hsp_score>
      <Hsp_evalue>1.25918e-20</Hsp_evalue>
      <Hsp_query-from>1618</Hsp_query-from>
      <Hsp_query-to>1941</Hsp_query-to>
      <Hsp_hit-from>594</Hsp_hit-from>
      <Hsp_hit-to>703</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>62</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>110</Hsp_align-len>
      <Hsp_qseq>ECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGERPYAC--ADCPREFAESGQLGRHRRALHR</Hsp_qseq>
      <Hsp_hseq>ECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQNRFHK</Hsp_hseq>
      <Hsp_midline>EC  C R FS    L  H R+H G +P+ C  CG+RF   GNLR H R H GE+P++C  C ++F+ +GNL  H  TH   +P+ C   +C + F + G +  H+   H+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>88.5817</Hsp_bit-score>
      <Hsp_score>218</Hsp_score>
      <Hsp_evalue>1.7809e-18</Hsp_evalue>
      <Hsp_query-from>1537</Hsp_query-from>
      <Hsp_query-to>1845</Hsp_query-to>
      <Hsp_hit-from>595</Hsp_hit-from>
      <Hsp_hit-to>699</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>41</Hsp_identity>
      <Hsp_positive>59</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>105</Hsp_align-len>
      <Hsp_qseq>CADCGRAFADSGTLHKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHAC--ADCGRRFADRGNLRKHRR</Hsp_qseq>
      <Hsp_hseq>CPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQN</Hsp_hseq>
      <Hsp_midline>C  C R F+ +  L  H R+H G +PF C  C + F+  G+LR H R HTGE+PY C  C ++F+ +GNL  H  TH   +P  C   +C + F   GN++ H+ </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>84.3445</Hsp_bit-score>
      <Hsp_score>207</Hsp_score>
      <Hsp_evalue>4.17198e-17</Hsp_evalue>
      <Hsp_query-from>1357</Hsp_query-from>
      <Hsp_query-to>1677</Hsp_query-to>
      <Hsp_hit-from>591</Hsp_hit-from>
      <Hsp_hit-to>699</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>41</Hsp_identity>
      <Hsp_positive>58</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>109</Hsp_align-len>
      <Hsp_qseq>KRHRCRDCPYGTDHRGDLEKHRRTHTGERPYACADCGRAFAVSGSLRKHRRTHTGERPYPCADCGRAFADSGTLHKHRRTHTGERPFEC--ADCRRAFSVPGSLRKHRR</Hsp_qseq>
      <Hsp_hseq>KKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQN</Hsp_hseq>
      <Hsp_midline>K+H C  C         LE H R+H G +P+ C  CG+ F   G+LR H R HTGE+PY C  C + F+  G L  H  TH   +PF C   +C + F+  G+++ H+ </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>84.3445</Hsp_bit-score>
      <Hsp_score>207</Hsp_score>
      <Hsp_evalue>4.35454e-17</Hsp_evalue>
      <Hsp_query-from>1378</Hsp_query-from>
      <Hsp_query-to>1761</Hsp_query-to>
      <Hsp_hit-from>568</Hsp_hit-from>
      <Hsp_hit-to>699</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>44</Hsp_identity>
      <Hsp_positive>67</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>132</Hsp_align-len>
      <Hsp_qseq>CPYGTDHRGDLEKHRRTHT--GERPYACADCGRAFAVSGSLRKHRRTHTGERPYPCADCGRAFADSGTLHKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPC--ADCGRRFADRGNLRKHRR</Hsp_qseq>
      <Hsp_hseq>LPPKSELVGGVEKPKGTQNTRAVKKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQN</Hsp_hseq>
      <Hsp_midline> P  ++  G +EK + T      + + C  C R F+ +  L  H R+H G +P+ C  CG+ F   G L  H R HTGE+P+ C  C + FS  G+L  H  TH   +P+ C   +C + F   GN++ H+ </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>5</Hsp_num>
      <Hsp_bit-score>75.0998</Hsp_bit-score>
      <Hsp_score>183</Hsp_score>
      <Hsp_evalue>2.85794e-14</Hsp_evalue>
      <Hsp_query-from>1705</Hsp_query-from>
      <Hsp_query-to>2076</Hsp_query-to>
      <Hsp_hit-from>595</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>40</Hsp_identity>
      <Hsp_positive>57</Hsp_positive>
      <Hsp_gaps>24</Hsp_gaps>
      <Hsp_align-len>126</Hsp_align-len>
      <Hsp_qseq>CADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHRRALHRIXXXXXXXXXXXXXXXASPPASARAVRCSV--CSARFAGLGELRRHQ</Hsp_qseq>
      <Hsp_hseq>CPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKL----------------------KPFVCKLENCNKTFTQLGNMKAHQ</Hsp_hseq>
      <Hsp_midline>C  C R F+   +L  H R+H G +P  C  CG+RF   GNLR H R HTGE+PY+C  C ++F+  G L  H     ++                      +   C +  C+  F  LG ++ HQ</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>6</Hsp_num>
      <Hsp_bit-score>62.003</Hsp_bit-score>
      <Hsp_score>149</Hsp_score>
      <Hsp_evalue>3.01969e-10</Hsp_evalue>
      <Hsp_query-from>1783</Hsp_query-from>
      <Hsp_query-to>2163</Hsp_query-to>
      <Hsp_hit-from>593</Hsp_hit-from>
      <Hsp_hit-to>699</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>55</Hsp_positive>
      <Hsp_gaps>24</Hsp_gaps>
      <Hsp_align-len>129</Hsp_align-len>
      <Hsp_qseq>HACADCGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHRRALHRIXXXXXXXXXXXXXXXASPPASARAVRCSVCSARFAGLGELRRHQESHAGQKPFVCTV--CQGTFTRSTHLRRHQK</Hsp_qseq>
      <Hsp_hseq>HECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHER-LH---------------------TGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQN</Hsp_hseq>
      <Hsp_midline>H C  C R F+   +L  H R+H G +P+ C  C + F + G L  H R LH                        +   C +C  +F+  G L  H  +H   KPFVC +  C  TFT+  +++ HQ </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YPR186C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:909733:911022:-1 gene:YPR186C transcript:YPR186C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PZF1 description:Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA [Source:SGD;Acc:S000006390]</Hit_def>
  <Hit_accession>YPR186C</Hit_accession>
  <Hit_len>429</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>74.3294</Hsp_bit-score>
      <Hsp_score>181</Hsp_score>
      <Hsp_evalue>2.2781e-14</Hsp_evalue>
      <Hsp_query-from>1462</Hsp_query-from>
      <Hsp_query-to>2157</Hsp_query-to>
      <Hsp_hit-from>56</Hsp_hit-from>
      <Hsp_hit-to>272</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>64</Hsp_identity>
      <Hsp_positive>92</Hsp_positive>
      <Hsp_gaps>35</Hsp_gaps>
      <Hsp_align-len>242</Hsp_align-len>
      <Hsp_qseq>CGRAFAVSGSLRKHRRT-HTGERPYPCADCGRAFADSGTLHKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTH---TGERPYAC--ADCPREFAESGQLGRHRRALHRIXXXXXXXXXXXXXXXASPPASARAVRCSVCSARFAGLGELRRHQESHAGQ---KPFVCTVC-QGTFTRSTHLRRH</Hsp_qseq>
      <Hsp_hseq>CDKAFTRPSILTEHQLSVHQGLRAFQCDKCAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHTKSFICPEEGCNLRFYKHPQLRAHILS-VHLHKLTCPHCNKSFQRPYRLRNHISKHHDPEVENPYQCTFAGCCKEFRIWSQLQSHIKNDH------------------------PKLKCPICSKPCVGENGLQMHMIIHDDSLVTKNWKCHICPDMSFSRKHDLLTH</Hsp_hseq>
      <Hsp_midline>C +AF     L +H+ + H G R + C  C ++F     L +H  TH+  +PF+C+ C +  +    L++H  THT     P   C  RF     LR H  +        C  C + F     LR H   H     E PY C  A C +EF    QL  H +  H                          ++C +CS    G   L+ H   H      K + C +C   +F+R   L  H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>60.4622</Hsp_bit-score>
      <Hsp_score>145</Hsp_score>
      <Hsp_evalue>5.62625e-10</Hsp_evalue>
      <Hsp_query-from>1366</Hsp_query-from>
      <Hsp_query-to>1938</Hsp_query-to>
      <Hsp_hit-from>81</Hsp_hit-from>
      <Hsp_hit-to>277</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>53</Hsp_identity>
      <Hsp_positive>79</Hsp_positive>
      <Hsp_gaps>28</Hsp_gaps>
      <Hsp_align-len>208</Hsp_align-len>
      <Hsp_qseq>RCRDCPYGTDHRGDLEKHRRTHTGERPYACADCGRAFAVSGSLRKHRRTHTGERPYPCADCGRAF-------ADSGTLHKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTH---TGERPYPC--ADCGRRFADRGNLRKHRRTHAGERPHA-CADCGRRFADRGNLRKHRRTHTGE---RPYACADCP-REFAESGQLGRHRRALH</Hsp_qseq>
      <Hsp_hseq>QCDKCAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHTKSFICPEEGCNLRFYKHPQLRAHILSVHLHKLT--------CPHCNKSFQRPYRLRNHISKHHDPEVENPYQCTFAGCCKEFRIWSQLQSHIK---NDHPKLKCPICSKPCVGENGLQMHMIIHDDSLVTKNWKCHICPDMSFSRKHDLLTHYGSIH</Hsp_hseq>
      <Hsp_midline>+C  C      +  LE+H  TH+  +P+ C+ CG+       L++H  THT     P   C   F       A   ++H H+ T        C  C ++F  P  LR H   H     E PY C  A C + F     L+ H +    + P   C  C +       L+ H   H      + + C  CP   F+    L  H  ++H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YGL254W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:22304:23203:1 gene:YGL254W transcript:YGL254W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FZF1 description:Transcription factor involved in sulfite metabolism; sole identified regulatory target is SSU1; overexpression suppresses sulfite-sensitivity of many unrelated mutants due to hyperactivation of SSU1, contains five zinc fingers; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003223]</Hit_def>
  <Hit_accession>YGL254W</Hit_accession>
  <Hit_len>299</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>64.3142</Hsp_bit-score>
      <Hsp_score>155</Hsp_score>
      <Hsp_evalue>1.58846e-11</Hsp_evalue>
      <Hsp_query-from>1600</Hsp_query-from>
      <Hsp_query-to>1851</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>52</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>88</Hsp_align-len>
      <Hsp_qseq>TGERPFECA--DCRRAFSVPGSLRKHRRTHTGERPYPCAD--CGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTH</Hsp_qseq>
      <Hsp_hseq>TKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>T  R ++C+   C + ++ P  L++H+ +HT ++PY C +  CG++F    +LR H+ TH+  +P AC  C +RF     LR+H  +H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>54.299</Hsp_bit-score>
      <Hsp_score>129</Hsp_score>
      <Hsp_evalue>2.49425e-08</Hsp_evalue>
      <Hsp_query-from>1516</Hsp_query-from>
      <Hsp_query-to>1767</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>45</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>88</Hsp_align-len>
      <Hsp_qseq>TGERPYPCA--DCGRAFADSGTLHKHRRTHTGERPFECAD--CRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTH</Hsp_qseq>
      <Hsp_hseq>TKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>T  R Y C+   C + +     L +H+ +HT ++P+ C +  C + F  P  LR H+ TH+  +P  C  C +RF     LR+H  +H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>51.2174</Hsp_bit-score>
      <Hsp_score>121</Hsp_score>
      <Hsp_evalue>3.12127e-07</Hsp_evalue>
      <Hsp_query-from>1684</Hsp_query-from>
      <Hsp_query-to>1932</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>93</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>47</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>87</Hsp_align-len>
      <Hsp_qseq>TGERPYPCA--DCGRRFADRGNLRKHRRTHAGERPHACAD--CGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHRRA</Hsp_qseq>
      <Hsp_hseq>TKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNS</Hsp_hseq>
      <Hsp_midline>T  R Y C+   C + +     L++H+ +H  ++P+ C +  CG++F    +LR H+ TH+  +P AC  C + F  + QL RH  +</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>49.6766</Hsp_bit-score>
      <Hsp_score>117</Hsp_score>
      <Hsp_evalue>7.96968e-07</Hsp_evalue>
      <Hsp_query-from>1432</Hsp_query-from>
      <Hsp_query-to>1683</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>45</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>88</Hsp_align-len>
      <Hsp_qseq>TGERPYACA--DCGRAFAVSGSLRKHRRTHTGERPYPCAD--CGRAFADSGTLHKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTH</Hsp_qseq>
      <Hsp_hseq>TKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>T  R Y C+   C + +     L++H+ +HT ++PY C +  CG+ F     L  H+ TH+  +P  C  C++ F     LR+H  +H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>5</Hsp_num>
      <Hsp_bit-score>47.3654</Hsp_bit-score>
      <Hsp_score>111</Hsp_score>
      <Hsp_evalue>4.72805e-06</Hsp_evalue>
      <Hsp_query-from>1408</Hsp_query-from>
      <Hsp_query-to>1599</Hsp_query-to>
      <Hsp_hit-from>29</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>66</Hsp_align-len>
      <Hsp_qseq>LEKHRRTHTGERPYACAD--CGRAFAVSGSLRKHRRTHTGERPYPCADCGRAFADSGTLHKHRRTH</Hsp_qseq>
      <Hsp_hseq>LQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>L++H+ +HT ++PY C +  CG+ F     LR H+ TH+  +P  C  C + F  +  L +H  +H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YNL027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:579580:581616:1 gene:YNL027W transcript:YNL027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRZ1 description:Transcription factor, activates transcription of stress response genes; nuclear localization is positively regulated by calcineurin-mediated dephosphorylation; rapidly localizes to the nucleus under blue light stress; can be activated in stochastic pulses of nuclear localization in response to calcium [Source:SGD;Acc:S000004972]</Hit_def>
  <Hit_accession>YNL027W</Hit_accession>
  <Hit_len>678</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>62.3882</Hsp_bit-score>
      <Hsp_score>150</Hsp_score>
      <Hsp_evalue>2.08709e-10</Hsp_evalue>
      <Hsp_query-from>1699</Hsp_query-from>
      <Hsp_query-to>1923</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>652</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>46</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>84</Hsp_align-len>
      <Hsp_qseq>YPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGERPYACA---------DCPREFAESGQLGRH</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRH</Hsp_hseq>
      <Hsp_midline>+ C  CG++F    NL+ H RTH  ERP  C+ CG+ FA + + ++H   HTG++ Y C           C ++FA S  LGRH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>60.8474</Hsp_bit-score>
      <Hsp_score>146</Hsp_score>
      <Hsp_evalue>5.94135e-10</Hsp_evalue>
      <Hsp_query-from>1615</Hsp_query-from>
      <Hsp_query-to>1863</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>51</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>92</Hsp_align-len>
      <Hsp_qseq>FECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACA---------DCGRRFADRGNLRKHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline>F C  C + F+ P +L+ H RTHT ERP+ C+ CG+ FA + + ++H   H G++ + C           CG++FA    L +H +T +G R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>58.5362</Hsp_bit-score>
      <Hsp_score>140</Hsp_score>
      <Hsp_evalue>3.44322e-09</Hsp_evalue>
      <Hsp_query-from>1447</Hsp_query-from>
      <Hsp_query-to>1779</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>37</Hsp_identity>
      <Hsp_positive>56</Hsp_positive>
      <Hsp_gaps>19</Hsp_gaps>
      <Hsp_align-len>111</Hsp_align-len>
      <Hsp_qseq>YACADCGRAFAVSGSLRKHRRTHTGERPYPCADCGRAFADSGTLHKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGER</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCG---------GKLKDG-------KPWG---CGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline>+AC  CG+ F    +L+ H RTHT ERP+ C+ CG+AFA      +H   HTG++ + C          G L+         +P+    CG++FA    L +H +T +G R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>57.7658</Hsp_bit-score>
      <Hsp_score>138</Hsp_score>
      <Hsp_evalue>5.65952e-09</Hsp_evalue>
      <Hsp_query-from>1405</Hsp_query-from>
      <Hsp_query-to>1611</Hsp_query-to>
      <Hsp_hit-from>583</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>78</Hsp_align-len>
      <Hsp_qseq>DLEKHRRTHTGERPYACADCGRAFAVSGSLRKHRRTHTGERPYPCA---------DCGRAFADSGTLHKHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>NLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline>+L+ H RTHT ERP+ C+ CG+AFA     ++H   HTG++ Y C           CG+ FA S  L +H +T +G R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YDR253C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:963990:964565:-1 gene:YDR253C transcript:YDR253C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MET32 description:Zinc-finger DNA-binding transcription factor; involved in transcriptional regulation of the methionine biosynthetic genes; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; lack of such a loop for MET31 may account for the differential actions of Met32p and Met31p; MET32 has a paralog, MET31, that arose from the whole genome duplication [Source:SGD;Acc:S000002661]</Hit_def>
  <Hit_accession>YDR253C</Hit_accession>
  <Hit_len>191</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>54.299</Hsp_bit-score>
      <Hsp_score>129</Hsp_score>
      <Hsp_evalue>9.76374e-09</Hsp_evalue>
      <Hsp_query-from>1666</Hsp_query-from>
      <Hsp_query-to>1863</Hsp_query-to>
      <Hsp_hit-from>87</Hsp_hit-from>
      <Hsp_hit-to>152</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>66</Hsp_align-len>
      <Hsp_qseq>KHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>QDRRNSTGEKRFKCAKCSLEFSRSSDLRRHEKTHFAILPNICPQCGKGFARKDALKRHYDTLTCRR</Hsp_hseq>
      <Hsp_midline>+ RR  TGE+ + CA C   F+   +LR+H +TH    P+ C  CG+ FA +  L++H  T T  R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>52.7582</Hsp_bit-score>
      <Hsp_score>125</Hsp_score>
      <Hsp_evalue>2.6026e-08</Hsp_evalue>
      <Hsp_query-from>1414</Hsp_query-from>
      <Hsp_query-to>1611</Hsp_query-to>
      <Hsp_hit-from>87</Hsp_hit-from>
      <Hsp_hit-to>152</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>66</Hsp_align-len>
      <Hsp_qseq>KHRRTHTGERPYACADCGRAFAVSGSLRKHRRTHTGERPYPCADCGRAFADSGTLHKHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>QDRRNSTGEKRFKCAKCSLEFSRSSDLRRHEKTHFAILPNICPQCGKGFARKDALKRHYDTLTCRR</Hsp_hseq>
      <Hsp_midline>+ RR  TGE+ + CA C   F+ S  LR+H +TH    P  C  CG+ FA    L +H  T T  R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>52.373</Hsp_bit-score>
      <Hsp_score>124</Hsp_score>
      <Hsp_evalue>3.65308e-08</Hsp_evalue>
      <Hsp_query-from>1582</Hsp_query-from>
      <Hsp_query-to>1779</Hsp_query-to>
      <Hsp_hit-from>87</Hsp_hit-from>
      <Hsp_hit-to>152</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>66</Hsp_align-len>
      <Hsp_qseq>KHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGER</Hsp_qseq>
      <Hsp_hseq>QDRRNSTGEKRFKCAKCSLEFSRSSDLRRHEKTHFAILPNICPQCGKGFARKDALKRHYDTLTCRR</Hsp_hseq>
      <Hsp_midline>+ RR  TGE+ F+CA C   FS    LR+H +TH    P  C  CG+ FA +  L++H  T    R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>46.9802</Hsp_bit-score>
      <Hsp_score>110</Hsp_score>
      <Hsp_evalue>2.46899e-06</Hsp_evalue>
      <Hsp_query-from>1498</Hsp_query-from>
      <Hsp_query-to>1695</Hsp_query-to>
      <Hsp_hit-from>87</Hsp_hit-from>
      <Hsp_hit-to>152</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>66</Hsp_align-len>
      <Hsp_qseq>KHRRTHTGERPYPCADCGRAFADSGTLHKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>QDRRNSTGEKRFKCAKCSLEFSRSSDLRRHEKTHFAILPNICPQCGKGFARKDALKRHYDTLTCRR</Hsp_hseq>
      <Hsp_midline>+ RR  TGE+ + CA C   F+ S  L +H +TH    P  C  C + F+   +L++H  T T  R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YPL038W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:480535:481068:1 gene:YPL038W transcript:YPL038W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MET31 description:Zinc-finger DNA-binding transcription factor; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; involved in transcriptional regulation of the methionine biosynthetic genes; feedforward loop controlling expression of MET32 and the lack of such a loop for MET31 may account for the differential actions of Met31p and Met32p; MET31 has a paralog, MET32, that arose from the whole genome duplication [Source:SGD;Acc:S000005959]</Hit_def>
  <Hit_accession>YPL038W</Hit_accession>
  <Hit_len>177</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>4.59614e-08</Hsp_evalue>
      <Hsp_query-from>1687</Hsp_query-from>
      <Hsp_query-to>1863</Hsp_query-to>
      <Hsp_hit-from>91</Hsp_hit-from>
      <Hsp_hit-to>149</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>GERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>GAQLYSCAKCQLKFSRSSDLRRHEKVHSLVLPHICSNCGKGFARKDALKRHSNTLTCQR</Hsp_hseq>
      <Hsp_midline>G + Y CA C  +F+   +LR+H + H+   PH C++CG+ FA +  L++H  T T +R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>4.62013e-07</Hsp_evalue>
      <Hsp_query-from>1435</Hsp_query-from>
      <Hsp_query-to>1611</Hsp_query-to>
      <Hsp_hit-from>91</Hsp_hit-from>
      <Hsp_hit-to>149</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>GERPYACADCGRAFAVSGSLRKHRRTHTGERPYPCADCGRAFADSGTLHKHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>GAQLYSCAKCQLKFSRSSDLRRHEKVHSLVLPHICSNCGKGFARKDALKRHSNTLTCQR</Hsp_hseq>
      <Hsp_midline>G + Y+CA C   F+ S  LR+H + H+   P+ C++CG+ FA    L +H  T T +R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>45.4394</Hsp_bit-score>
      <Hsp_score>106</Hsp_score>
      <Hsp_evalue>7.58402e-06</Hsp_evalue>
      <Hsp_query-from>1603</Hsp_query-from>
      <Hsp_query-to>1779</Hsp_query-to>
      <Hsp_hit-from>91</Hsp_hit-from>
      <Hsp_hit-to>149</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>GERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGER</Hsp_qseq>
      <Hsp_hseq>GAQLYSCAKCQLKFSRSSDLRRHEKVHSLVLPHICSNCGKGFARKDALKRHSNTLTCQR</Hsp_hseq>
      <Hsp_midline>G + + CA C+  FS    LR+H + H+   P+ C++CG+ FA +  L++H  T   +R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YGL035C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:431548:433062:-1 gene:YGL035C transcript:YGL035C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG1 description:Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state [Source:SGD;Acc:S000003003]</Hit_def>
  <Hit_accession>YGL035C</Hit_accession>
  <Hit_len>504</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>2.95108e-07</Hsp_evalue>
      <Hsp_query-from>1690</Hsp_query-from>
      <Hsp_query-to>1932</Hsp_query-to>
      <Hsp_hit-from>2</Hsp_hit-from>
      <Hsp_hit-to>89</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>90</Hsp_align-len>
      <Hsp_qseq>ERPYPCADCGRRFADRGNLRKHRRTHA-------GERPHACADCGRRFADRGNLRKHRRTHTGERPYAC--ADCPREFAESGQLGRHRRA</Hsp_qseq>
      <Hsp_hseq>QSPYPMTQVSN--VDDGSLLKESKSKSKVAAKSEAPRPHACPICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRI</Hsp_hseq>
      <Hsp_midline>+ PYP         D G+L K  ++ +         RPHAC  C R F    +  +H R HTGE+P+AC    C + F+ S +L RHRR </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YDR216W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:895035:899006:1 gene:YDR216W transcript:YDR216W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADR1 description:Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization [Source:SGD;Acc:S000002624]</Hit_def>
  <Hit_accession>YDR216W</Hit_accession>
  <Hit_len>1323</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.2174</Hsp_bit-score>
      <Hsp_score>121</Hsp_score>
      <Hsp_evalue>7.08231e-07</Hsp_evalue>
      <Hsp_query-from>1423</Hsp_query-from>
      <Hsp_query-to>1605</Hsp_query-to>
      <Hsp_hit-from>95</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>38</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>63</Hsp_align-len>
      <Hsp_qseq>RTHTGE-RPYACADCGRAFAVSGSLRKHRRTHTGERPYPCADCGRAFADSGTLHKH-RRTHTG</Hsp_qseq>
      <Hsp_hseq>RTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>RT +G+ R + C  C RAFA    L++H R+HT E+PYPC  C R F     L +H ++ H+G</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>1.42043e-06</Hsp_evalue>
      <Hsp_query-from>1591</Hsp_query-from>
      <Hsp_query-to>1773</Hsp_query-to>
      <Hsp_hit-from>95</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>63</Hsp_align-len>
      <Hsp_qseq>RTHTGE-RPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKH-RRTHAG</Hsp_qseq>
      <Hsp_hseq>RTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>RT +G+ R F C  C RAF+    L++H R+HT E+PYPC  C R F  R  L +H ++ H+G</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>49.6766</Hsp_bit-score>
      <Hsp_score>117</Hsp_score>
      <Hsp_evalue>1.80144e-06</Hsp_evalue>
      <Hsp_query-from>1741</Hsp_query-from>
      <Hsp_query-to>1938</Hsp_query-to>
      <Hsp_hit-from>89</Hsp_hit-from>
      <Hsp_hit-to>155</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>67</Hsp_align-len>
      <Hsp_qseq>NLRKHRRTHAGE-RPHACADCGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHRRALH</Hsp_qseq>
      <Hsp_hseq>NLRLNGRTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIH</Hsp_hseq>
      <Hsp_midline>NLR + RT +G+ R   C  C R FA + +L++H R+HT E+PY C  C R F     L RH + +H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>5.66413e-06</Hsp_evalue>
      <Hsp_query-from>1648</Hsp_query-from>
      <Hsp_query-to>1857</Hsp_query-to>
      <Hsp_hit-from>86</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>72</Hsp_align-len>
      <Hsp_qseq>VPGSLRKHRRTHTGE-RPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKH-RRTHTG</Hsp_qseq>
      <Hsp_hseq>LPENLRLNGRTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>+P +LR + RT +G+ R + C  C R FA + +L++H R+H  E+P+ C  C R F  R  L +H ++ H+G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YGL209W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:95858:97006:1 gene:YGL209W transcript:YGL209W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG2 description:Zinc finger transcriptional repressor; cooperates with Mig1p in glucose-induced gene repression; under low glucose conditions relocalizes to mitochondrion, where it interacts with Ups1p, antagonizes mitochondrial fission factor Dnm1p, indicative of a role in mitochondrial fusion or regulating morphology; regulates filamentous growth in response to glucose depletion; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000003177]</Hit_def>
  <Hit_accession>YGL209W</Hit_accession>
  <Hit_len>382</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>8.28739e-07</Hsp_evalue>
      <Hsp_query-from>1693</Hsp_query-from>
      <Hsp_query-to>1860</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>RPYPCADCGRRFADRGNLRKHRRTHAGERPHACA--DCGRRFADRGNLRKHRRTHTGE</Hsp_qseq>
      <Hsp_hseq>RPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQ</Hsp_hseq>
      <Hsp_midline>RP+ C  C R F    + ++H RTH GE+PH CA   CG+ F+    L++H RTHTG+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>9.36509e-07</Hsp_evalue>
      <Hsp_query-from>1441</Hsp_query-from>
      <Hsp_query-to>1608</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>RPYACADCGRAFAVSGSLRKHRRTHTGERPYPCA--DCGRAFADSGTLHKHRRTHTGE</Hsp_qseq>
      <Hsp_hseq>RPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQ</Hsp_hseq>
      <Hsp_midline>RP+ C  C R F      ++H RTHTGE+P+ CA   CG++F+ S  L +H RTHTG+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>1.98378e-06</Hsp_evalue>
      <Hsp_query-from>1609</Hsp_query-from>
      <Hsp_query-to>1776</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>RPFECADCRRAFSVPGSLRKHRRTHTGERPYPCA--DCGRRFADRGNLRKHRRTHAGE</Hsp_qseq>
      <Hsp_hseq>RPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQ</Hsp_hseq>
      <Hsp_midline>RPF C  C R F      ++H RTHTGE+P+ CA   CG+ F+    L++H RTH G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YKL062W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:323228:325120:1 gene:YKL062W transcript:YKL062W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN4 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes, inducing gene expression; involved in diauxic shift [Source:SGD;Acc:S000001545]</Hit_def>
  <Hit_accession>YKL062W</Hit_accession>
  <Hit_len>630</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>1.16611e-06</Hsp_evalue>
      <Hsp_query-from>1609</Hsp_query-from>
      <Hsp_query-to>1767</Hsp_query-to>
      <Hsp_hit-from>571</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>RPFECADCRRAFSVPGSLRKH-RRTHTGERPYPCADCGRRFADRGNLRKHRRTH</Hsp_qseq>
      <Hsp_hseq>KPFKCKDCEKAFRRSEHLKRHIRSVHSTERPFACMFCEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline>+PF+C DC +AF     L++H R  H+ ERP+ C  C ++F+   NL +H +TH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>6.68985e-06</Hsp_evalue>
      <Hsp_query-from>1441</Hsp_query-from>
      <Hsp_query-to>1599</Hsp_query-to>
      <Hsp_hit-from>571</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>RPYACADCGRAFAVSGSLRKH-RRTHTGERPYPCADCGRAFADSGTLHKHRRTH</Hsp_qseq>
      <Hsp_hseq>KPFKCKDCEKAFRRSEHLKRHIRSVHSTERPFACMFCEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline>+P+ C DC +AF  S  L++H R  H+ ERP+ C  C + F+ S  L +H +TH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YDR146C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:748613:750742:-1 gene:YDR146C transcript:YDR146C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWI5 description:Transcription factor that recruits Mediator and Swi/Snf complexes; activates transcription of genes expressed at the M/G1 phase boundary and in G1 phase; required for expression of the HO gene controlling mating type switching; localization to nucleus occurs during G1 and appears to be regulated by phosphorylation by Cdc28p kinase; SWI5 has a paralog, ACE2, that arose from the whole genome duplication [Source:SGD;Acc:S000002553]</Hit_def>
  <Hit_accession>YDR146C</Hit_accession>
  <Hit_len>709</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>6.52593e-06</Hsp_evalue>
      <Hsp_query-from>1570</Hsp_query-from>
      <Hsp_query-to>1926</Hsp_query-to>
      <Hsp_hit-from>509</Hsp_hit-from>
      <Hsp_hit-to>627</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>37</Hsp_identity>
      <Hsp_positive>63</Hsp_positive>
      <Hsp_gaps>10</Hsp_gaps>
      <Hsp_align-len>124</Hsp_align-len>
      <Hsp_qseq>GTLHKHRRTHTGERPFECADCRRAFSVP-GSLRKHRRTHTGERPYPCA--DCGRRFADRGNLRKHRRTHAGERPHAC--ADCGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHR</Hsp_qseq>
      <Hsp_hseq>GTHIKEINTYTTNSPSKI--TRKLTTLPRGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSHQ-EKAYACP-CGKKFNREDALVVHR</Hsp_hseq>
      <Hsp_midline>GT  K   T+T   P +    R+  ++P GS+ K+ +    ++ + C    C + F  R N+R H +TH  +RP++C    C + F    +L +H+++H  E+ YAC  C ++F     L  HR</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>98</Statistics_hsp-len>
      <Statistics_eff-space>1675510313</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>8</Iteration_iter-num>
  <Iteration_query-ID>Query_8</Iteration_query-ID>
  <Iteration_query-def>PMZ_0039327-RA transcript Note:&quot;Similar to PDZK1 Na(+)/H(+) exchange regulatory cofactor NHE-RF3 (Bos taurus)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|-1|0|0|-1|1|1|0|484</Iteration_query-def>
  <Iteration_query-len>1455</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>93</Statistics_hsp-len>
      <Statistics_eff-space>901704664</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>9</Iteration_iter-num>
  <Iteration_query-ID>Query_9</Iteration_query-ID>
  <Iteration_query-def>PMZ_0063182-RA transcript Note:&quot;Similar to ZNF782 Zinc finger protein 782 (Homo sapiens)&quot; offset:0 AED:0.28 eAED:0.28 QI:0|0|0|0.33|1|1|3|0|694</Iteration_query-def>
  <Iteration_query-len>2085</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YJL056C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:330431:333073:-1 gene:YJL056C transcript:YJL056C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZAP1 description:Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains [Source:SGD;Acc:S000003592]</Hit_def>
  <Hit_accession>YJL056C</Hit_accession>
  <Hit_len>880</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>119.783</Hsp_bit-score>
      <Hsp_score>299</Hsp_score>
      <Hsp_evalue>2.26317e-28</Hsp_evalue>
      <Hsp_query-from>1099</Hsp_query-from>
      <Hsp_query-to>1506</Hsp_query-to>
      <Hsp_hit-from>734</Hsp_hit-from>
      <Hsp_hit-to>869</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>55</Hsp_identity>
      <Hsp_positive>82</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>138</Hsp_align-len>
      <Hsp_qseq>GERPYACA--DCGRAFAVSGSLRKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHR</Hsp_qseq>
      <Hsp_hseq>GKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSFDDLGKLNSQK</Hsp_hseq>
      <Hsp_midline>G+  Y C   DC R F     L +H + H+  +P++C  C+R FS   +L +H RTH+GE+PY C  C ++FA   +L+ H RTH GE+P  C  CG+RF +  NL KH +TH  ++ Y C+DC + F + G+L   +</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>114.005</Hsp_bit-score>
      <Hsp_score>284</Hsp_score>
      <Hsp_evalue>1.40938e-26</Hsp_evalue>
      <Hsp_query-from>1063</Hsp_query-from>
      <Hsp_query-to>1449</Hsp_query-to>
      <Hsp_hit-from>752</Hsp_hit-from>
      <Hsp_hit-to>879</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>53</Hsp_identity>
      <Hsp_positive>78</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>130</Hsp_align-len>
      <Hsp_qseq>RGDLEKHRRTHTGERPYACADCGRAFAVSGSLRKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGER-PY</Hsp_qseq>
      <Hsp_hseq>RQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSFDDLGKLNSQKVKCALERKPY</Hsp_hseq>
      <Hsp_midline>R  L +H + H+  +PY C  C R F+   +L +H RTH+GE+P++C  C + F++  SL+ H RTHTGE+P  C  CG+RF +  NL KH +TH  ++ + C+DC + F D G L   +     ER PY</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>94.7449</Hsp_bit-score>
      <Hsp_score>234</Hsp_score>
      <Hsp_evalue>1.35959e-20</Hsp_evalue>
      <Hsp_query-from>1021</Hsp_query-from>
      <Hsp_query-to>1359</Hsp_query-to>
      <Hsp_hit-from>766</Hsp_hit-from>
      <Hsp_hit-to>876</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>46</Hsp_identity>
      <Hsp_positive>66</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>113</Hsp_align-len>
      <Hsp_qseq>KRHRCRDCPYGTDHRGDLEKHRRTHTGERPYACADCGRAFAVSGSLRKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGER</Hsp_qseq>
      <Hsp_hseq>KPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSFDDLGKLNSQKVKCALER</Hsp_hseq>
      <Hsp_midline>K ++C+ C         L +H RTH+GE+PY C  C + FA+S SL+ H RTHTGE+P +C  C + F+   +L KH +TH  ++ Y C+DC + F D G L   +   A ER</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>78.9518</Hsp_bit-score>
      <Hsp_score>193</Hsp_score>
      <Hsp_evalue>1.21078e-15</Hsp_evalue>
      <Hsp_query-from>1210</Hsp_query-from>
      <Hsp_query-to>1713</Hsp_query-to>
      <Hsp_hit-from>712</Hsp_hit-from>
      <Hsp_hit-to>859</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>51</Hsp_identity>
      <Hsp_positive>75</Hsp_positive>
      <Hsp_gaps>30</Hsp_gaps>
      <Hsp_align-len>173</Hsp_align-len>
      <Hsp_qseq>CRRAFSVPGSLRKHRR-THT--GERPYPCA--DCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHRRALHRIXXXXXXXXXXXXXXXXASPPASARAVRCSVCSARFAGLGELRRHQESHAGQKPFVCTVCQGTF</Hsp_qseq>
      <Hsp_hseq>CNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTH-----------------------TGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSF</Hsp_hseq>
      <Hsp_midline>C ++FS    L  H    H   G+  Y C   DC R F  R  L +H + H+  +P+ C  C R F+    L +H RTH+GE+PY C  C ++FA S  L  H R                            + ++C +C  RF     L +H ++H  QK + C+ C  +F</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>5</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>4.87989e-06</Hsp_evalue>
      <Hsp_query-from>1378</Hsp_query-from>
      <Hsp_query-to>1761</Hsp_query-to>
      <Hsp_hit-from>712</Hsp_hit-from>
      <Hsp_hit-to>821</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>53</Hsp_positive>
      <Hsp_gaps>28</Hsp_gaps>
      <Hsp_align-len>133</Hsp_align-len>
      <Hsp_qseq>CGRRFADRGNLRKHRR-THT--GERPYACA--DCPREFAESGQLGRHRRALHRIXXXXXXXXXXXXXXXXASPPASARAVRCSVCSARFAGLGELRRHQESHAGQKPFVCTVCQGTFTRSTHLRRHQKGHTGE</Hsp_qseq>
      <Hsp_hseq>CNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKY-----------------------KPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGE</Hsp_hseq>
      <Hsp_midline>C + F+    L  H    H   G+  Y C   DC R F +  +L RH +   +                        +  +C  C   F+    L +H  +H+G+KP+ C +C   F  S+ L+ H + HTGE</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YOR113W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:534075:536819:1 gene:YOR113W transcript:YOR113W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AZF1 description:Zinc-finger transcription factor; involved in diauxic shift; in the presence of glucose, activates transcription of genes involved in growth and carbon metabolism; in nonfermentable carbon sources, activates transcription of genes involved in maintenance of cell wall integrity; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005639]</Hit_def>
  <Hit_accession>YOR113W</Hit_accession>
  <Hit_len>914</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>95.9005</Hsp_bit-score>
      <Hsp_score>237</Hsp_score>
      <Hsp_evalue>6.76488e-21</Hsp_evalue>
      <Hsp_query-from>1198</Hsp_query-from>
      <Hsp_query-to>1521</Hsp_query-to>
      <Hsp_hit-from>594</Hsp_hit-from>
      <Hsp_hit-to>703</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>62</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>110</Hsp_align-len>
      <Hsp_qseq>ECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGERPYAC--ADCPREFAESGQLGRHRRALHR</Hsp_qseq>
      <Hsp_hseq>ECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQNRFHK</Hsp_hseq>
      <Hsp_midline>EC  C R FS    L  H R+H G +P+ C  CG+RF   GNLR H R H GE+P++C  C ++F+ +GNL  H  TH   +P+ C   +C + F + G +  H+   H+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>89.7373</Hsp_bit-score>
      <Hsp_score>221</Hsp_score>
      <Hsp_evalue>6.09937e-19</Hsp_evalue>
      <Hsp_query-from>1042</Hsp_query-from>
      <Hsp_query-to>1425</Hsp_query-to>
      <Hsp_hit-from>568</Hsp_hit-from>
      <Hsp_hit-to>699</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>46</Hsp_identity>
      <Hsp_positive>70</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>132</Hsp_align-len>
      <Hsp_qseq>CPYGTDHRGDLEKHRRTHT--GERPYACADCGRAFAVSGSLRKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHAC--ADCGRRFADRGNLRKHRR</Hsp_qseq>
      <Hsp_hseq>LPPKSELVGGVEKPKGTQNTRAVKKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQN</Hsp_hseq>
      <Hsp_midline> P  ++  G +EK + T      + + C  C R F+ +  L  H R+H G +PF C  C + F+  G+LR H R HTGE+PY C  C ++F+ +GNL  H  TH   +P  C   +C + F   GN++ H+ </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>85.1149</Hsp_bit-score>
      <Hsp_score>209</Hsp_score>
      <Hsp_evalue>1.74557e-17</Hsp_evalue>
      <Hsp_query-from>1021</Hsp_query-from>
      <Hsp_query-to>1341</Hsp_query-to>
      <Hsp_hit-from>591</Hsp_hit-from>
      <Hsp_hit-to>699</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>41</Hsp_identity>
      <Hsp_positive>58</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>109</Hsp_align-len>
      <Hsp_qseq>KRHRCRDCPYGTDHRGDLEKHRRTHTGERPYACADCGRAFAVSGSLRKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPC--ADCGRRFADRGNLRKHRR</Hsp_qseq>
      <Hsp_hseq>KKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQN</Hsp_hseq>
      <Hsp_midline>K+H C  C         LE H R+H G +P+ C  CG+ F   G+LR H R HTGE+P+ C  C + FS  G+L  H  TH   +P+ C   +C + F   GN++ H+ </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>75.0998</Hsp_bit-score>
      <Hsp_score>183</Hsp_score>
      <Hsp_evalue>1.93402e-14</Hsp_evalue>
      <Hsp_query-from>1285</Hsp_query-from>
      <Hsp_query-to>1659</Hsp_query-to>
      <Hsp_hit-from>595</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>40</Hsp_identity>
      <Hsp_positive>57</Hsp_positive>
      <Hsp_gaps>25</Hsp_gaps>
      <Hsp_align-len>127</Hsp_align-len>
      <Hsp_qseq>CADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHRRALHRIXXXXXXXXXXXXXXXXASPPASARAVRCSV--CSARFAGLGELRRHQ</Hsp_qseq>
      <Hsp_hseq>CPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKL-----------------------KPFVCKLENCNKTFTQLGNMKAHQ</Hsp_hseq>
      <Hsp_midline>C  C R F+   +L  H R+H G +P  C  CG+RF   GNLR H R HTGE+PY+C  C ++F+  G L  H     ++                       +   C +  C+  F  LG ++ HQ</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>5</Hsp_num>
      <Hsp_bit-score>62.003</Hsp_bit-score>
      <Hsp_score>149</Hsp_score>
      <Hsp_evalue>2.21465e-10</Hsp_evalue>
      <Hsp_query-from>1363</Hsp_query-from>
      <Hsp_query-to>1746</Hsp_query-to>
      <Hsp_hit-from>593</Hsp_hit-from>
      <Hsp_hit-to>699</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>55</Hsp_positive>
      <Hsp_gaps>25</Hsp_gaps>
      <Hsp_align-len>130</Hsp_align-len>
      <Hsp_qseq>HACADCGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHRRALHRIXXXXXXXXXXXXXXXXASPPASARAVRCSVCSARFAGLGELRRHQESHAGQKPFVCTV--CQGTFTRSTHLRRHQK</Hsp_qseq>
      <Hsp_hseq>HECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHER-LH----------------------TGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQN</Hsp_hseq>
      <Hsp_midline>H C  C R F+   +L  H R+H G +P+ C  C + F + G L  H R LH                         +   C +C  +F+  G L  H  +H   KPFVC +  C  TFT+  +++ HQ </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YPR186C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:909733:911022:-1 gene:YPR186C transcript:YPR186C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PZF1 description:Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA [Source:SGD;Acc:S000006390]</Hit_def>
  <Hit_accession>YPR186C</Hit_accession>
  <Hit_len>429</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>69.3218</Hsp_bit-score>
      <Hsp_score>168</Hsp_score>
      <Hsp_evalue>5.97328e-13</Hsp_evalue>
      <Hsp_query-from>1090</Hsp_query-from>
      <Hsp_query-to>1740</Hsp_query-to>
      <Hsp_hit-from>73</Hsp_hit-from>
      <Hsp_hit-to>272</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>59</Hsp_identity>
      <Hsp_positive>83</Hsp_positive>
      <Hsp_gaps>35</Hsp_gaps>
      <Hsp_align-len>226</Hsp_align-len>
      <Hsp_qseq>THTGERPYACADCGRAFAVSGSLRKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTH---TGERPYAC--ADCPREFAESGQLGRHRRALHRIXXXXXXXXXXXXXXXXASPPASARAVRCSVCSARFAGLGELRRHQESHAGQ---KPFVCTVC-QGTFTRSTHLRRH</Hsp_qseq>
      <Hsp_hseq>VHQGLRAFQCDKCAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHTKSFICPEEGCNLRFYKHPQLRAHILS-VHLHKLTCPHCNKSFQRPYRLRNHISKHHDPEVENPYQCTFAGCCKEFRIWSQLQSHIKNDH-------------------------PKLKCPICSKPCVGENGLQMHMIIHDDSLVTKNWKCHICPDMSFSRKHDLLTH</Hsp_hseq>
      <Hsp_midline> H G R + C  C ++F     L +H  TH+  +PF+C+ C +  +    L++H  THT     P   C  RF     LR H  +        C  C + F     LR H   H     E PY C  A C +EF    QL  H +  H                           ++C +CS    G   L+ H   H      K + C +C   +F+R   L  H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>6.55305e-07</Hsp_evalue>
      <Hsp_query-from>1030</Hsp_query-from>
      <Hsp_query-to>1518</Hsp_query-to>
      <Hsp_hit-from>81</Hsp_hit-from>
      <Hsp_hit-to>277</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>46</Hsp_identity>
      <Hsp_positive>69</Hsp_positive>
      <Hsp_gaps>40</Hsp_gaps>
      <Hsp_align-len>200</Hsp_align-len>
      <Hsp_qseq>RCRDCPYGTDHRGDLEKHRRTHTGERPYACADCGRAFAVSGSLRKHRRTHTGE---------------------------RPFECADCRRAFSVPGSLRKHRRTH---TGERPYPC--ADCGRRFADRGNLRKHRRTHAGERPHA-CADCGRRFADRGNLRKHRRTHTGE---RPYACADCP-REFAESGQLGRHRRALH</Hsp_qseq>
      <Hsp_hseq>QCDKCAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHTKSFICPEEGCNLRFYKHPQLRAHILSVHLHKLTCPHCNKSFQRPYRLRNHISKHHDPEVENPYQCTFAGCCKEFRIWSQLQSHIK---NDHPKLKCPICSKPCVGENGLQMHMIIHDDSLVTKNWKCHICPDMSFSRKHDLLTHYGSIH</Hsp_hseq>
      <Hsp_midline>+C  C      +  LE+H  TH+  +P+ C+ CG+       L++H  THT                                 C  C ++F  P  LR H   H     E PY C  A C + F     L+ H +    + P   C  C +       L+ H   H      + + C  CP   F+    L  H  ++H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YGL254W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:22304:23203:1 gene:YGL254W transcript:YGL254W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FZF1 description:Transcription factor involved in sulfite metabolism; sole identified regulatory target is SSU1; overexpression suppresses sulfite-sensitivity of many unrelated mutants due to hyperactivation of SSU1, contains five zinc fingers; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003223]</Hit_def>
  <Hit_accession>YGL254W</Hit_accession>
  <Hit_len>299</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>64.3142</Hsp_bit-score>
      <Hsp_score>155</Hsp_score>
      <Hsp_evalue>1.18564e-11</Hsp_evalue>
      <Hsp_query-from>1180</Hsp_query-from>
      <Hsp_query-to>1431</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>52</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>88</Hsp_align-len>
      <Hsp_qseq>TGERPFECA--DCRRAFSVPGSLRKHRRTHTGERPYPCAD--CGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTH</Hsp_qseq>
      <Hsp_hseq>TKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>T  R ++C+   C + ++ P  L++H+ +HT ++PY C +  CG++F    +LR H+ TH+  +P AC  C +RF     LR+H  +H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>55.0694</Hsp_bit-score>
      <Hsp_score>131</Hsp_score>
      <Hsp_evalue>1.34554e-08</Hsp_evalue>
      <Hsp_query-from>1096</Hsp_query-from>
      <Hsp_query-to>1347</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>46</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>88</Hsp_align-len>
      <Hsp_qseq>TGERPYACA--DCGRAFAVSGSLRKHRRTHTGERPFECAD--CRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTH</Hsp_qseq>
      <Hsp_hseq>TKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>T  R Y C+   C + +     L++H+ +HT ++P+ C +  C + F  P  LR H+ TH+  +P  C  C +RF     LR+H  +H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>51.2174</Hsp_bit-score>
      <Hsp_score>121</Hsp_score>
      <Hsp_evalue>2.42142e-07</Hsp_evalue>
      <Hsp_query-from>1264</Hsp_query-from>
      <Hsp_query-to>1512</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>93</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>47</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>87</Hsp_align-len>
      <Hsp_qseq>TGERPYPCA--DCGRRFADRGNLRKHRRTHAGERPHACAD--CGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHRRA</Hsp_qseq>
      <Hsp_hseq>TKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNS</Hsp_hseq>
      <Hsp_midline>T  R Y C+   C + +     L++H+ +H  ++P+ C +  CG++F    +LR H+ TH+  +P AC  C + F  + QL RH  +</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>49.6766</Hsp_bit-score>
      <Hsp_score>117</Hsp_score>
      <Hsp_evalue>6.95309e-07</Hsp_evalue>
      <Hsp_query-from>1072</Hsp_query-from>
      <Hsp_query-to>1263</Hsp_query-to>
      <Hsp_hit-from>29</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>38</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>66</Hsp_align-len>
      <Hsp_qseq>LEKHRRTHTGERPYACAD--CGRAFAVSGSLRKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTH</Hsp_qseq>
      <Hsp_hseq>LQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>L++H+ +HT ++PY C +  CG+ F     LR H+ TH+  +P  C  C++ F     LR+H  +H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YNL027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:579580:581616:1 gene:YNL027W transcript:YNL027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRZ1 description:Transcription factor, activates transcription of stress response genes; nuclear localization is positively regulated by calcineurin-mediated dephosphorylation; rapidly localizes to the nucleus under blue light stress; can be activated in stochastic pulses of nuclear localization in response to calcium [Source:SGD;Acc:S000004972]</Hit_def>
  <Hit_accession>YNL027W</Hit_accession>
  <Hit_len>678</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>62.3882</Hsp_bit-score>
      <Hsp_score>150</Hsp_score>
      <Hsp_evalue>1.62828e-10</Hsp_evalue>
      <Hsp_query-from>1279</Hsp_query-from>
      <Hsp_query-to>1503</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>652</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>46</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>84</Hsp_align-len>
      <Hsp_qseq>YPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGERPYACA---------DCPREFAESGQLGRH</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRH</Hsp_hseq>
      <Hsp_midline>+ C  CG++F    NL+ H RTH  ERP  C+ CG+ FA + + ++H   HTG++ Y C           C ++FA S  LGRH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>61.2326</Hsp_bit-score>
      <Hsp_score>147</Hsp_score>
      <Hsp_evalue>3.88265e-10</Hsp_evalue>
      <Hsp_query-from>1111</Hsp_query-from>
      <Hsp_query-to>1359</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>50</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>92</Hsp_align-len>
      <Hsp_qseq>YACADCGRAFAVSGSLRKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCA---------DCGRRFADRGNLRKHRRTHAGER</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline>+AC  CG+ F    +L+ H RTHT ERPF C+ C +AF+     ++H   HTG++ Y C           CG++FA    L +H +T +G R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>60.8474</Hsp_bit-score>
      <Hsp_score>146</Hsp_score>
      <Hsp_evalue>4.61153e-10</Hsp_evalue>
      <Hsp_query-from>1195</Hsp_query-from>
      <Hsp_query-to>1443</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>51</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>92</Hsp_align-len>
      <Hsp_qseq>FECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACA---------DCGRRFADRGNLRKHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline>F C  C + F+ P +L+ H RTHT ERP+ C+ CG+ FA + + ++H   H G++ + C           CG++FA    L +H +T +G R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YPL038W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:480535:481068:1 gene:YPL038W transcript:YPL038W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MET31 description:Zinc-finger DNA-binding transcription factor; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; involved in transcriptional regulation of the methionine biosynthetic genes; feedforward loop controlling expression of MET32 and the lack of such a loop for MET31 may account for the differential actions of Met31p and Met32p; MET31 has a paralog, MET32, that arose from the whole genome duplication [Source:SGD;Acc:S000005959]</Hit_def>
  <Hit_accession>YPL038W</Hit_accession>
  <Hit_len>177</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>3.37099e-08</Hsp_evalue>
      <Hsp_query-from>1267</Hsp_query-from>
      <Hsp_query-to>1443</Hsp_query-to>
      <Hsp_hit-from>91</Hsp_hit-from>
      <Hsp_hit-to>149</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>GERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>GAQLYSCAKCQLKFSRSSDLRRHEKVHSLVLPHICSNCGKGFARKDALKRHSNTLTCQR</Hsp_hseq>
      <Hsp_midline>G + Y CA C  +F+   +LR+H + H+   PH C++CG+ FA +  L++H  T T +R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>45.4394</Hsp_bit-score>
      <Hsp_score>106</Hsp_score>
      <Hsp_evalue>5.62793e-06</Hsp_evalue>
      <Hsp_query-from>1183</Hsp_query-from>
      <Hsp_query-to>1359</Hsp_query-to>
      <Hsp_hit-from>91</Hsp_hit-from>
      <Hsp_hit-to>149</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>GERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGER</Hsp_qseq>
      <Hsp_hseq>GAQLYSCAKCQLKFSRSSDLRRHEKVHSLVLPHICSNCGKGFARKDALKRHSNTLTCQR</Hsp_hseq>
      <Hsp_midline>G + + CA C+  FS    LR+H + H+   P+ C++CG+ FA +  L++H  T   +R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YDR253C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:963990:964565:-1 gene:YDR253C transcript:YDR253C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MET32 description:Zinc-finger DNA-binding transcription factor; involved in transcriptional regulation of the methionine biosynthetic genes; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; lack of such a loop for MET31 may account for the differential actions of Met32p and Met31p; MET32 has a paralog, MET31, that arose from the whole genome duplication [Source:SGD;Acc:S000002661]</Hit_def>
  <Hit_accession>YDR253C</Hit_accession>
  <Hit_len>191</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.6026</Hsp_bit-score>
      <Hsp_score>122</Hsp_score>
      <Hsp_evalue>6.00535e-08</Hsp_evalue>
      <Hsp_query-from>1246</Hsp_query-from>
      <Hsp_query-to>1434</Hsp_query-to>
      <Hsp_hit-from>87</Hsp_hit-from>
      <Hsp_hit-to>149</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>63</Hsp_align-len>
      <Hsp_qseq>KHRRTHTGERPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKHRRTHT</Hsp_qseq>
      <Hsp_hseq>QDRRNSTGEKRFKCAKCSLEFSRSSDLRRHEKTHFAILPNICPQCGKGFARKDALKRHYDTLT</Hsp_hseq>
      <Hsp_midline>+ RR  TGE+ + CA C   F+   +LR+H +TH    P+ C  CG+ FA +  L++H  T T</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.8322</Hsp_bit-score>
      <Hsp_score>120</Hsp_score>
      <Hsp_evalue>1.11713e-07</Hsp_evalue>
      <Hsp_query-from>1162</Hsp_query-from>
      <Hsp_query-to>1344</Hsp_query-to>
      <Hsp_hit-from>87</Hsp_hit-from>
      <Hsp_hit-to>147</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>61</Hsp_align-len>
      <Hsp_qseq>KHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKHRRT</Hsp_qseq>
      <Hsp_hseq>QDRRNSTGEKRFKCAKCSLEFSRSSDLRRHEKTHFAILPNICPQCGKGFARKDALKRHYDT</Hsp_hseq>
      <Hsp_midline>+ RR  TGE+ F+CA C   FS    LR+H +TH    P  C  CG+ FA +  L++H  T</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>46.9802</Hsp_bit-score>
      <Hsp_score>110</Hsp_score>
      <Hsp_evalue>1.91475e-06</Hsp_evalue>
      <Hsp_query-from>1078</Hsp_query-from>
      <Hsp_query-to>1266</Hsp_query-to>
      <Hsp_hit-from>87</Hsp_hit-from>
      <Hsp_hit-to>149</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>63</Hsp_align-len>
      <Hsp_qseq>KHRRTHTGERPYACADCGRAFAVSGSLRKHRRTHTGERPFECADCRRAFSVPGSLRKHRRTHT</Hsp_qseq>
      <Hsp_hseq>QDRRNSTGEKRFKCAKCSLEFSRSSDLRRHEKTHFAILPNICPQCGKGFARKDALKRHYDTLT</Hsp_hseq>
      <Hsp_midline>+ RR  TGE+ + CA C   F+ S  LR+H +TH    P  C  C + F+   +L++H  T T</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YDR216W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:895035:899006:1 gene:YDR216W transcript:YDR216W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADR1 description:Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization [Source:SGD;Acc:S000002624]</Hit_def>
  <Hit_accession>YDR216W</Hit_accession>
  <Hit_len>1323</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>52.373</Hsp_bit-score>
      <Hsp_score>124</Hsp_score>
      <Hsp_evalue>2.05063e-07</Hsp_evalue>
      <Hsp_query-from>1153</Hsp_query-from>
      <Hsp_query-to>1353</Hsp_query-to>
      <Hsp_hit-from>89</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>43</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>69</Hsp_align-len>
      <Hsp_qseq>SLRKHRRTHTGE-RPFECADCRRAFSVPGSLRKHRRTHTGERPYPCADCGRRFADRGNLRKH-RRTHAG</Hsp_qseq>
      <Hsp_hseq>NLRLNGRTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>+LR + RT +G+ R F C  C RAF+    L++H R+HT E+PYPC  C R F  R  L +H ++ H+G</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>1.32322e-06</Hsp_evalue>
      <Hsp_query-from>1321</Hsp_query-from>
      <Hsp_query-to>1518</Hsp_query-to>
      <Hsp_hit-from>89</Hsp_hit-from>
      <Hsp_hit-to>155</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>67</Hsp_align-len>
      <Hsp_qseq>NLRKHRRTHAGE-RPHACADCGRRFADRGNLRKHRRTHTGERPYACADCPREFAESGQLGRHRRALH</Hsp_qseq>
      <Hsp_hseq>NLRLNGRTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIH</Hsp_hseq>
      <Hsp_midline>NLR + RT +G+ R   C  C R FA + +L++H R+HT E+PY C  C R F     L RH + +H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>4.28262e-06</Hsp_evalue>
      <Hsp_query-from>1228</Hsp_query-from>
      <Hsp_query-to>1437</Hsp_query-to>
      <Hsp_hit-from>86</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>72</Hsp_align-len>
      <Hsp_qseq>VPGSLRKHRRTHTGE-RPYPCADCGRRFADRGNLRKHRRTHAGERPHACADCGRRFADRGNLRKH-RRTHTG</Hsp_qseq>
      <Hsp_hseq>LPENLRLNGRTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>+P +LR + RT +G+ R + C  C R FA + +L++H R+H  E+P+ C  C R F  R  L +H ++ H+G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YGL035C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:431548:433062:-1 gene:YGL035C transcript:YGL035C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG1 description:Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state [Source:SGD;Acc:S000003003]</Hit_def>
  <Hit_accession>YGL035C</Hit_accession>
  <Hit_len>504</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>2.05694e-07</Hsp_evalue>
      <Hsp_query-from>1270</Hsp_query-from>
      <Hsp_query-to>1512</Hsp_query-to>
      <Hsp_hit-from>2</Hsp_hit-from>
      <Hsp_hit-to>89</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>90</Hsp_align-len>
      <Hsp_qseq>ERPYPCADCGRRFADRGNLRKHRRTHA-------GERPHACADCGRRFADRGNLRKHRRTHTGERPYAC--ADCPREFAESGQLGRHRRA</Hsp_qseq>
      <Hsp_hseq>QSPYPMTQVSN--VDDGSLLKESKSKSKVAAKSEAPRPHACPICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRI</Hsp_hseq>
      <Hsp_midline>+ PYP         D G+L K  ++ +         RPHAC  C R F    +  +H R HTGE+P+AC    C + F+ S +L RHRR </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YGL209W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:95858:97006:1 gene:YGL209W transcript:YGL209W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG2 description:Zinc finger transcriptional repressor; cooperates with Mig1p in glucose-induced gene repression; under low glucose conditions relocalizes to mitochondrion, where it interacts with Ups1p, antagonizes mitochondrial fission factor Dnm1p, indicative of a role in mitochondrial fusion or regulating morphology; regulates filamentous growth in response to glucose depletion; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000003177]</Hit_def>
  <Hit_accession>YGL209W</Hit_accession>
  <Hit_len>382</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>5.65892e-07</Hsp_evalue>
      <Hsp_query-from>1273</Hsp_query-from>
      <Hsp_query-to>1440</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>RPYPCADCGRRFADRGNLRKHRRTHAGERPHACA--DCGRRFADRGNLRKHRRTHTGE</Hsp_qseq>
      <Hsp_hseq>RPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQ</Hsp_hseq>
      <Hsp_midline>RP+ C  C R F    + ++H RTH GE+PH CA   CG+ F+    L++H RTHTG+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>49.2914</Hsp_bit-score>
      <Hsp_score>116</Hsp_score>
      <Hsp_evalue>1.3573e-06</Hsp_evalue>
      <Hsp_query-from>1189</Hsp_query-from>
      <Hsp_query-to>1356</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>RPFECADCRRAFSVPGSLRKHRRTHTGERPYPCA--DCGRRFADRGNLRKHRRTHAGE</Hsp_qseq>
      <Hsp_hseq>RPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQ</Hsp_hseq>
      <Hsp_midline>RPF C  C R F      ++H RTHTGE+P+ CA   CG+ F+    L++H RTH G+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YKL062W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:323228:325120:1 gene:YKL062W transcript:YKL062W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN4 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes, inducing gene expression; involved in diauxic shift [Source:SGD;Acc:S000001545]</Hit_def>
  <Hit_accession>YKL062W</Hit_accession>
  <Hit_len>630</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>9.26685e-07</Hsp_evalue>
      <Hsp_query-from>1189</Hsp_query-from>
      <Hsp_query-to>1347</Hsp_query-to>
      <Hsp_hit-from>571</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>RPFECADCRRAFSVPGSLRKH-RRTHTGERPYPCADCGRRFADRGNLRKHRRTH</Hsp_qseq>
      <Hsp_hseq>KPFKCKDCEKAFRRSEHLKRHIRSVHSTERPFACMFCEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline>+PF+C DC +AF     L++H R  H+ ERP+ C  C ++F+   NL +H +TH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>2.24435e-06</Hsp_evalue>
      <Hsp_query-from>1105</Hsp_query-from>
      <Hsp_query-to>1263</Hsp_query-to>
      <Hsp_hit-from>571</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>RPYACADCGRAFAVSGSLRKH-RRTHTGERPFECADCRRAFSVPGSLRKHRRTH</Hsp_qseq>
      <Hsp_hseq>KPFKCKDCEKAFRRSEHLKRHIRSVHSTERPFACMFCEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline>+P+ C DC +AF  S  L++H R  H+ ERPF C  C + FS   +L +H +TH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YBR066C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:370037:370699:-1 gene:YBR066C transcript:YBR066C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRG2 description:Transcriptional repressor; mediates glucose repression and negatively regulates filamentous growth; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000000270]</Hit_def>
  <Hit_accession>YBR066C</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.595</Hsp_bit-score>
      <Hsp_score>109</Hsp_score>
      <Hsp_evalue>3.85283e-06</Hsp_evalue>
      <Hsp_query-from>1108</Hsp_query-from>
      <Hsp_query-to>1359</Hsp_query-to>
      <Hsp_hit-from>123</Hsp_hit-from>
      <Hsp_hit-to>209</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>41</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>87</Hsp_align-len>
      <Hsp_qseq>PYACADCGRAFAVSGSLRKHRRTHTGERP-FECADCRRAFSVPGSLRKHRRTHTGERPYPC--ADCGRRFADRGNLRKHRRTHAGER</Hsp_qseq>
      <Hsp_hseq>PYSSIKISKPTKTVIKLKSTKTNTAGQRTRHFCKICSTGFTTSGHLSRHNRIHTGEKNHICPHEGCGQRFSRHDNCNQHYRTHANKK</Hsp_hseq>
      <Hsp_midline>PY+     +       L+  +    G+R    C  C   F+  G L +H R HTGE+ + C    CG+RF+   N  +H RTHA ++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1365999733</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>10</Iteration_iter-num>
  <Iteration_query-ID>Query_10</Iteration_query-ID>
  <Iteration_query-def>PMZ_0063184-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.53 eAED:1.00 QI:0|0|0|0.4|1|1|5|0|539</Iteration_query-def>
  <Iteration_query-len>1620</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>94</Statistics_hsp-len>
      <Statistics_eff-space>1022975482</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>11</Iteration_iter-num>
  <Iteration_query-ID>Query_11</Iteration_query-ID>
  <Iteration_query-def>PMZ_0033072-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0|0|2|2|132</Iteration_query-def>
  <Iteration_query-len>398</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>79</Statistics_hsp-len>
      <Statistics_eff-space>126811351</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>12</Iteration_iter-num>
  <Iteration_query-ID>Query_12</Iteration_query-ID>
  <Iteration_query-def>PMZ_0062497-RA transcript Note:&quot;Similar to ZNF564 Zinc finger protein 564 (Homo sapiens)&quot; offset:0 AED:0.59 eAED:0.59 QI:0|0|0|0.75|1|1|4|0|307</Iteration_query-def>
  <Iteration_query-len>924</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>89</Statistics_hsp-len>
      <Statistics_eff-space>509540073</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>13</Iteration_iter-num>
  <Iteration_query-ID>Query_13</Iteration_query-ID>
  <Iteration_query-def>PMZ_0062498-RA transcript Note:&quot;Similar to ZNF564 Zinc finger protein 564 (Homo sapiens)&quot; offset:0 AED:0.36 eAED:0.38 QI:0|0|0|0.75|1|1|4|0|230</Iteration_query-def>
  <Iteration_query-len>693</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>86</Statistics_hsp-len>
      <Statistics_eff-space>340237715</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>14</Iteration_iter-num>
  <Iteration_query-ID>Query_14</Iteration_query-ID>
  <Iteration_query-def>PMZ_0028541-RA transcript Note:&quot;Protein of unknown function&quot; offset:699 AED:0.94 eAED:1.00 QI:699|0|0|0.28|0|0.14|7|0|256</Iteration_query-def>
  <Iteration_query-len>1470</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>94</Statistics_hsp-len>
      <Statistics_eff-space>908292132</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>15</Iteration_iter-num>
  <Iteration_query-ID>Query_15</Iteration_query-ID>
  <Iteration_query-def>PMZ_0048345-RA transcript Note:&quot;Similar to ZNF582 Zinc finger protein 582 (Homo sapiens)&quot; offset:0 AED:0.45 eAED:0.46 QI:0|0|0|0.5|0|0|2|0|108</Iteration_query-def>
  <Iteration_query-len>327</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YOR113W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:534075:536819:1 gene:YOR113W transcript:YOR113W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AZF1 description:Zinc-finger transcription factor; involved in diauxic shift; in the presence of glucose, activates transcription of genes involved in growth and carbon metabolism; in nonfermentable carbon sources, activates transcription of genes involved in maintenance of cell wall integrity; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005639]</Hit_def>
  <Hit_accession>YOR113W</Hit_accession>
  <Hit_len>914</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>52.373</Hsp_bit-score>
      <Hsp_score>124</Hsp_score>
      <Hsp_evalue>9.50135e-10</Hsp_evalue>
      <Hsp_query-from>43</Hsp_query-from>
      <Hsp_query-to>291</Hsp_query-to>
      <Hsp_hit-from>595</Hsp_hit-from>
      <Hsp_hit-to>677</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>83</Hsp_align-len>
      <Hsp_qseq>CPHCPFNTDKLNVFIDHQATHDARASDKCAKCGKVFIDAEVFREHQAAHSAEKPYGCTGCELAFSRSQDLDEHQRTHASKEPY</Hsp_qseq>
      <Hsp_hseq>CPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPF</Hsp_hseq>
      <Hsp_midline>CP+C     +      H  +H       C  CGK F      R H+  H+ EKPY C  C+  FSR  +L  H  TH   +P+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>42.3578</Hsp_bit-score>
      <Hsp_score>98</Hsp_score>
      <Hsp_evalue>3.5581e-06</Hsp_evalue>
      <Hsp_query-from>94</Hsp_query-from>
      <Hsp_query-to>291</Hsp_query-to>
      <Hsp_hit-from>582</Hsp_hit-from>
      <Hsp_hit-to>649</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>68</Hsp_align-len>
      <Hsp_qseq>QATHDARASDK--CAKCGKVFIDAEVFREHQAAHSAEKPYGCTGCELAFSRSQDLDEHQRTHASKEPY</Hsp_qseq>
      <Hsp_hseq>KGTQNTRAVKKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPY</Hsp_hseq>
      <Hsp_midline>+ T + RA  K  C  C ++F  A     H  +H   KP+ C  C   F++  +L  H+R H  ++PY</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YKL062W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:323228:325120:1 gene:YKL062W transcript:YKL062W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN4 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes, inducing gene expression; involved in diauxic shift [Source:SGD;Acc:S000001545]</Hit_def>
  <Hit_accession>YKL062W</Hit_accession>
  <Hit_len>630</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.6026</Hsp_bit-score>
      <Hsp_score>122</Hsp_score>
      <Hsp_evalue>2.06864e-09</Hsp_evalue>
      <Hsp_query-from>103</Hsp_query-from>
      <Hsp_query-to>273</Hsp_query-to>
      <Hsp_hit-from>567</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>HDARASDKCAKCGKVFIDAEVFREH-QAAHSAEKPYGCTGCELAFSRSQDLDEHQRTH</Hsp_qseq>
      <Hsp_hseq>YDKNKPFKCKDCEKAFRRSEHLKRHIRSVHSTERPFACMFCEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline>+D     KC  C K F  +E  + H ++ HS E+P+ C  CE  FSRS +L +H +TH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YJL056C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:330431:333073:-1 gene:YJL056C transcript:YJL056C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZAP1 description:Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains [Source:SGD;Acc:S000003592]</Hit_def>
  <Hit_accession>YJL056C</Hit_accession>
  <Hit_len>880</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.521</Hsp_bit-score>
      <Hsp_score>114</Hsp_score>
      <Hsp_evalue>1.96606e-08</Hsp_evalue>
      <Hsp_query-from>82</Hsp_query-from>
      <Hsp_query-to>294</Hsp_query-to>
      <Hsp_hit-from>755</Hsp_hit-from>
      <Hsp_hit-to>825</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>71</Hsp_align-len>
      <Hsp_qseq>FIDHQATHDARASDKCAKCGKVFIDAEVFREHQAAHSAEKPYGCTGCELAFSRSQDLDEHQRTHASKEPYR</Hsp_qseq>
      <Hsp_hseq>LIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQ</Hsp_hseq>
      <Hsp_midline> I H   H      KC  C + F   E   +H   HS EKPY C  C   F+ S  L  H RTH  ++P +</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>43.8986</Hsp_bit-score>
      <Hsp_score>102</Hsp_score>
      <Hsp_evalue>8.43736e-07</Hsp_evalue>
      <Hsp_query-from>79</Hsp_query-from>
      <Hsp_query-to>282</Hsp_query-to>
      <Hsp_hit-from>782</Hsp_hit-from>
      <Hsp_hit-to>849</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>30</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>68</Hsp_align-len>
      <Hsp_qseq>VFIDHQATHDARASDKCAKCGKVFIDAEVFREHQAAHSAEKPYGCTGCELAFSRSQDLDEHQRTHASK</Hsp_qseq>
      <Hsp_hseq>TLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTHQKK</Hsp_hseq>
      <Hsp_midline>  + H  TH      KC  C K F  +   + H   H+ EKP  C  C   F+ S +L +H +TH  K</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>42.743</Hsp_bit-score>
      <Hsp_score>99</Hsp_score>
      <Hsp_evalue>2.02155e-06</Hsp_evalue>
      <Hsp_query-from>136</Hsp_query-from>
      <Hsp_query-to>294</Hsp_query-to>
      <Hsp_hit-from>745</Hsp_hit-from>
      <Hsp_hit-to>797</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>19</Hsp_identity>
      <Hsp_positive>28</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>53</Hsp_align-len>
      <Hsp_qseq>CGKVFIDAEVFREHQAAHSAEKPYGCTGCELAFSRSQDLDEHQRTHASKEPYR</Hsp_qseq>
      <Hsp_hseq>CHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYK</Hsp_hseq>
      <Hsp_midline>C + F   +    H   HS  KPY C  C+  FS  + L +H RTH+ ++PY+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YER130C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:421115:422446:-1 gene:YER130C transcript:YER130C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COM2 description:Transcription factor that binds IME1 Upstream Activation Signal (UAS)ru; COM2 transcription is regulated by Haa1p, Sok2p and Zap1p transcriptional activators; may bind the IME1 promoter under all growth conditions to negatively regulate its transcription in the absence of a positive regulator that binds more effectively; repressor activity may depend on phosphorylation by PKA; C. albicans homolog (MNL1) plays a role in adaptation to stress [Source:SGD;Acc:S000000932]</Hit_def>
  <Hit_accession>YER130C</Hit_accession>
  <Hit_len>443</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>45.4394</Hsp_bit-score>
      <Hsp_score>106</Hsp_score>
      <Hsp_evalue>2.76771e-07</Hsp_evalue>
      <Hsp_query-from>106</Hsp_query-from>
      <Hsp_query-to>279</Hsp_query-to>
      <Hsp_hit-from>384</Hsp_hit-from>
      <Hsp_hit-to>442</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>DARASDKCAKCGKVFIDAEVFREH-QAAHSAEKPYGCTGCELAFSRSQDLDEHQRTHAS</Hsp_qseq>
      <Hsp_hseq>DASKQFGCEFCDRRFKRQEHLKRHVRSLHMCEKPFTCHICNKNFSRSDNLNQHVKTHAS</Hsp_hseq>
      <Hsp_midline>DA     C  C + F   E  + H ++ H  EKP+ C  C   FSRS +L++H +THAS</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YMR037C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:344403:346517:-1 gene:YMR037C transcript:YMR037C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN2 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; relative distribution to nucleus increases upon DNA replication stress [Source:SGD;Acc:S000004640]</Hit_def>
  <Hit_accession>YMR037C</Hit_accession>
  <Hit_len>704</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>45.0542</Hsp_bit-score>
      <Hsp_score>105</Hsp_score>
      <Hsp_evalue>4.04633e-07</Hsp_evalue>
      <Hsp_query-from>127</Hsp_query-from>
      <Hsp_query-to>273</Hsp_query-to>
      <Hsp_hit-from>649</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>30</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>50</Hsp_align-len>
      <Hsp_qseq>CAKCGKVFIDAEVFREH-QAAHSAEKPYGCTGCELAFSRSQDLDEHQRTH</Hsp_qseq>
      <Hsp_hseq>CHICPKSFKRSEHLKRHVRSVHSNERPFACHICDKKFSRSDNLSQHIKTH</Hsp_hseq>
      <Hsp_midline>C  C K F  +E  + H ++ HS E+P+ C  C+  FSRS +L +H +TH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YNL027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:579580:581616:1 gene:YNL027W transcript:YNL027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRZ1 description:Transcription factor, activates transcription of stress response genes; nuclear localization is positively regulated by calcineurin-mediated dephosphorylation; rapidly localizes to the nucleus under blue light stress; can be activated in stochastic pulses of nuclear localization in response to calcium [Source:SGD;Acc:S000004972]</Hit_def>
  <Hit_accession>YNL027W</Hit_accession>
  <Hit_len>678</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>44.2838</Hsp_bit-score>
      <Hsp_score>103</Hsp_score>
      <Hsp_evalue>5.77766e-07</Hsp_evalue>
      <Hsp_query-from>115</Hsp_query-from>
      <Hsp_query-to>291</Hsp_query-to>
      <Hsp_hit-from>567</Hsp_hit-from>
      <Hsp_hit-to>625</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>ASDKCAKCGKVFIDAEVFREHQAAHSAEKPYGCTGCELAFSRSQDLDEHQRTHASKEPY</Hsp_qseq>
      <Hsp_hseq>ANFACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRY</Hsp_hseq>
      <Hsp_midline>A+  C  CGK F      + H   H+ E+P+ C+ C  AF+R  D   H+  H  K+ Y</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YGL035C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:431548:433062:-1 gene:YGL035C transcript:YGL035C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG1 description:Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state [Source:SGD;Acc:S000003003]</Hit_def>
  <Hit_accession>YGL035C</Hit_accession>
  <Hit_len>504</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>41.9726</Hsp_bit-score>
      <Hsp_score>97</Hsp_score>
      <Hsp_evalue>3.58289e-06</Hsp_evalue>
      <Hsp_query-from>97</Hsp_query-from>
      <Hsp_query-to>288</Hsp_query-to>
      <Hsp_hit-from>30</Hsp_hit-from>
      <Hsp_hit-to>95</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>30</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>66</Hsp_align-len>
      <Hsp_qseq>ATHDARASDKCAKCGKVFIDAEVFREHQAAHSAEKPYGCT--GCELAFSRSQDLDEHQRTHASKEP</Hsp_qseq>
      <Hsp_hseq>AKSEAPRPHACPICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRIHTNSHP</Hsp_hseq>
      <Hsp_midline>A  +A     C  C + F   E    H   H+ EKP+ C   GC   FSRS +L  H+R H +  P</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YJR127C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:658917:663059:-1 gene:YJR127C transcript:YJR127C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSF2 description:Zinc-finger protein; involved in transcriptional control of both nuclear and mitochondrial genes, many of which specify products required for glycerol-based growth, respiration, and other functions; RSF2 has a paralog, TDA9, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000003888]</Hit_def>
  <Hit_accession>YJR127C</Hit_accession>
  <Hit_len>1380</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>41.9726</Hsp_bit-score>
      <Hsp_score>97</Hsp_score>
      <Hsp_evalue>4.62918e-06</Hsp_evalue>
      <Hsp_query-from>127</Hsp_query-from>
      <Hsp_query-to>279</Hsp_query-to>
      <Hsp_hit-from>153</Hsp_hit-from>
      <Hsp_hit-to>204</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>19</Hsp_identity>
      <Hsp_positive>28</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>CAKCGKVFIDAEVFREHQAAHSAEKPYGCTGCELAFSRSQDLDEH-QRTHAS</Hsp_qseq>
      <Hsp_hseq>CPTCTRGFVRQEHLKRHQHSHTREKPYLCIFCGRCFARRDLVLRHQQKLHAA</Hsp_hseq>
      <Hsp_midline>C  C + F+  E  + HQ +H+ EKPY C  C   F+R   +  H Q+ HA+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YER028C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:210692:211876:-1 gene:YER028C transcript:YER028C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG3 description:Transcriptional regulator; partially nonfunctional in S288C strains but has a major role in catabolite repression and ethanol response in some other strains; involved in response to toxic agents; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p, allowing induction of damage response genesenvironment [Source:SGD;Acc:S000000830]</Hit_def>
  <Hit_accession>YER028C</Hit_accession>
  <Hit_len>394</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>41.2022</Hsp_bit-score>
      <Hsp_score>95</Hsp_score>
      <Hsp_evalue>6.83762e-06</Hsp_evalue>
      <Hsp_query-from>124</Hsp_query-from>
      <Hsp_query-to>297</Hsp_query-to>
      <Hsp_hit-from>18</Hsp_hit-from>
      <Hsp_hit-to>77</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>60</Hsp_align-len>
      <Hsp_qseq>KCAKCGKVFIDAEVFREHQAAHSAEKPYGCT--GCELAFSRSQDLDEHQRTHASKEPYRR</Hsp_qseq>
      <Hsp_hseq>RCEICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHTKGVQRRR</Hsp_hseq>
      <Hsp_midline>+C  C + F   E  + H   H+ EKP+ CT  GC  +FSRS +L  H RTH      RR</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YDR146C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:748613:750742:-1 gene:YDR146C transcript:YDR146C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWI5 description:Transcription factor that recruits Mediator and Swi/Snf complexes; activates transcription of genes expressed at the M/G1 phase boundary and in G1 phase; required for expression of the HO gene controlling mating type switching; localization to nucleus occurs during G1 and appears to be regulated by phosphorylation by Cdc28p kinase; SWI5 has a paralog, ACE2, that arose from the whole genome duplication [Source:SGD;Acc:S000002553]</Hit_def>
  <Hit_accession>YDR146C</Hit_accession>
  <Hit_len>709</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>40.817</Hsp_bit-score>
      <Hsp_score>94</Hsp_score>
      <Hsp_evalue>9.58864e-06</Hsp_evalue>
      <Hsp_query-from>136</Hsp_query-from>
      <Hsp_query-to>282</Hsp_query-to>
      <Hsp_hit-from>557</Hsp_hit-from>
      <Hsp_hit-to>607</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>19</Hsp_identity>
      <Hsp_positive>26</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>51</Hsp_align-len>
      <Hsp_qseq>CGKVFIDAEVFREHQAAHSAEKPYGCT--GCELAFSRSQDLDEHQRTHASK</Hsp_qseq>
      <Hsp_hseq>CTKTFKRRYNIRSHIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK</Hsp_hseq>
      <Hsp_midline>C K F      R H   H  ++PY C   GC+ AF R+ DL  H+++H  K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>76</Statistics_hsp-len>
      <Statistics_eff-space>79611411</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>16</Iteration_iter-num>
  <Iteration_query-ID>Query_16</Iteration_query-ID>
  <Iteration_query-def>PMZ_0062505-RA transcript Note:&quot;Similar to SHPK Sedoheptulokinase (Homo sapiens)&quot; offset:100 AED:0.31 eAED:0.40 QI:100|0|0|1|1|1|2|0|137</Iteration_query-def>
  <Iteration_query-len>514</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>83</Statistics_hsp-len>
      <Statistics_eff-space>208231496</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>17</Iteration_iter-num>
  <Iteration_query-ID>Query_17</Iteration_query-ID>
  <Iteration_query-def>PMZ_0062506-RA transcript Note:&quot;Similar to CG14683 Probable methyltransferase-like protein 15 homolog (Drosophila melanogaster)&quot; offset:30 AED:0.29 eAED:0.54 QI:30|0.5|0.33|1|1|1|3|0|173</Iteration_query-def>
  <Iteration_query-len>552</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>84</Statistics_hsp-len>
      <Statistics_eff-space>235966700</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>18</Iteration_iter-num>
  <Iteration_query-ID>Query_18</Iteration_query-ID>
  <Iteration_query-def>PMZ_0062507-RA transcript Note:&quot;Similar to Kcna3 Potassium voltage-gated channel subfamily A member 3 (Mus musculus)&quot; offset:0 AED:0.07 eAED:0.07 QI:0|-1|0|1|-1|1|1|0|590</Iteration_query-def>
  <Iteration_query-len>1773</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>95</Statistics_hsp-len>
      <Statistics_eff-space>1134385232</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>19</Iteration_iter-num>
  <Iteration_query-ID>Query_19</Iteration_query-ID>
  <Iteration_query-def>PMZ_0062493-RA transcript Note:&quot;Similar to ZKSCAN8 Zinc finger protein with KRAB and SCAN domains 8 (Homo sapiens)&quot; offset:0 AED:0.22 eAED:0.22 QI:0|0|0|0.5|1|1|2|0|211</Iteration_query-def>
  <Iteration_query-len>636</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YJL056C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:330431:333073:-1 gene:YJL056C transcript:YJL056C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZAP1 description:Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains [Source:SGD;Acc:S000003592]</Hit_def>
  <Hit_accession>YJL056C</Hit_accession>
  <Hit_len>880</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>93.5893</Hsp_bit-score>
      <Hsp_score>231</Hsp_score>
      <Hsp_evalue>1.01653e-22</Hsp_evalue>
      <Hsp_query-from>211</Hsp_query-from>
      <Hsp_query-to>615</Hsp_query-to>
      <Hsp_hit-from>744</Hsp_hit-from>
      <Hsp_hit-to>876</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>48</Hsp_identity>
      <Hsp_positive>72</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>135</Hsp_align-len>
      <Hsp_qseq>ECGKVLVDAEALRRHEASHARERPHKCTMCDMAFAQAEGLVAHRRIHAREVLFQCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>DCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSFDDLGKLNSQKVKCALER</Hsp_hseq>
      <Hsp_midline>+C +     + L RH   H++ +P+KC  C   F+  E LV H R H+ E  ++C  C  +FA +  L+ H RTHTGE+P  C  CGK F  S +L  H +TH  ++ Y C +C ++F   G L + +     ER</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>91.2781</Hsp_bit-score>
      <Hsp_score>225</Hsp_score>
      <Hsp_evalue>5.91878e-22</Hsp_evalue>
      <Hsp_query-from>214</Hsp_query-from>
      <Hsp_query-to>603</Hsp_query-to>
      <Hsp_hit-from>712</Hsp_hit-from>
      <Hsp_hit-to>846</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>51</Hsp_identity>
      <Hsp_positive>72</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>135</Hsp_align-len>
      <Hsp_qseq>CGKVLVDAEALRRH-EASHAR--ERPHKCTM--CDMAFAQAEGLVAHRRIHAREVLFQCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRRTH</Hsp_qseq>
      <Hsp_hseq>CNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH</Hsp_hseq>
      <Hsp_midline>C K    A+ L  H EA H    +  ++C    C   F Q + L+ H ++H++   ++C  C   F+  + L  H RTH+GE+P+ C  C K FA S SL+ H RTHTGE+P  C  CG+ F  S  L  H +TH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>76.2554</Hsp_bit-score>
      <Hsp_score>186</Hsp_score>
      <Hsp_evalue>9.00731e-17</Hsp_evalue>
      <Hsp_query-from>298</Hsp_query-from>
      <Hsp_query-to>618</Hsp_query-to>
      <Hsp_hit-from>712</Hsp_hit-from>
      <Hsp_hit-to>823</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>41</Hsp_identity>
      <Hsp_positive>62</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>112</Hsp_align-len>
      <Hsp_qseq>CDMAFAQAEGLVAH-RRIHAR--EVLFQCV--DCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRRTHTGERP</Hsp_qseq>
      <Hsp_hseq>CNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKP</Hsp_hseq>
      <Hsp_midline>C+ +F+ A+ L  H   +H    +  +QC+  DC   F +   L  H + H+  +P+ C  C + F+   +L  H RTH+GE+PY C  C + FA S +L  H RTHTGE+P</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>75.8702</Hsp_bit-score>
      <Hsp_score>185</Hsp_score>
      <Hsp_evalue>1.46328e-16</Hsp_evalue>
      <Hsp_query-from>37</Hsp_query-from>
      <Hsp_query-to>537</Hsp_query-to>
      <Hsp_hit-from>712</Hsp_hit-from>
      <Hsp_hit-to>879</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>53</Hsp_identity>
      <Hsp_positive>77</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>173</Hsp_align-len>
      <Hsp_qseq>CNWVVVSLPALEDHMKR---HAGRTEPVVYRC--PHCPYGADTVSVLIGHQATHDAAESRKCAECGKVLVDAEALRRHEASHARERPHKCTMCDMAFAQAEGLVAHRRIHAREVLFQCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGER-PY</Hsp_qseq>
      <Hsp_hseq>CNKSFSSAQELNDHLEAVHLTRGKSE---YQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSFDDLGKLNSQKVKCALERKPY</Hsp_hseq>
      <Hsp_midline>CN    S   L DH++      G++E   Y+C    C         LI H   H   +  KC  C +     E L +H  +H+ E+P+KC +C+  FA +  L  H R H  E   QC  CG  F  +  L  H +TH  ++ + C++C K+F   G L +       ER PY</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YOR113W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:534075:536819:1 gene:YOR113W transcript:YOR113W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AZF1 description:Zinc-finger transcription factor; involved in diauxic shift; in the presence of glucose, activates transcription of genes involved in growth and carbon metabolism; in nonfermentable carbon sources, activates transcription of genes involved in maintenance of cell wall integrity; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005639]</Hit_def>
  <Hit_accession>YOR113W</Hit_accession>
  <Hit_len>914</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>88.5817</Hsp_bit-score>
      <Hsp_score>218</Hsp_score>
      <Hsp_evalue>5.1811e-21</Hsp_evalue>
      <Hsp_query-from>277</Hsp_query-from>
      <Hsp_query-to>594</Hsp_query-to>
      <Hsp_hit-from>591</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>41</Hsp_identity>
      <Hsp_positive>56</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>108</Hsp_align-len>
      <Hsp_qseq>RPHKCTMCDMAFAQAEGLVAHRRIHAREVLFQCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACG--ECGRAFARSGALLTHR</Hsp_qseq>
      <Hsp_hseq>KKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQ</Hsp_hseq>
      <Hsp_midline>+ H+C  C   F+QA  L  H R H     F C  CG  F +   LR H+R HTGE+P+ C  C K F+R G+L AH  TH   +P+ C    C + F + G +  H+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>85.5001</Hsp_bit-score>
      <Hsp_score>210</Hsp_score>
      <Hsp_evalue>5.87276e-20</Hsp_evalue>
      <Hsp_query-from>370</Hsp_query-from>
      <Hsp_query-to>618</Hsp_query-to>
      <Hsp_hit-from>594</Hsp_hit-from>
      <Hsp_hit-to>676</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>36</Hsp_identity>
      <Hsp_positive>49</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>83</Hsp_align-len>
      <Hsp_qseq>QCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRRTHTGERP</Hsp_qseq>
      <Hsp_hseq>ECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKP</Hsp_hseq>
      <Hsp_midline>+C  C   F++A +L  H R+H G +P  C  CGK F + G+LR H R HTGE+PY+C  C + F+R G L  H  TH   +P</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>70.0922</Hsp_bit-score>
      <Hsp_score>170</Hsp_score>
      <Hsp_evalue>1.32868e-14</Hsp_evalue>
      <Hsp_query-from>166</Hsp_query-from>
      <Hsp_query-to>507</Hsp_query-to>
      <Hsp_hit-from>583</Hsp_hit-from>
      <Hsp_hit-to>697</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>52</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>116</Hsp_align-len>
      <Hsp_qseq>GHQATHDAAESRKCAECGKVLVDAEALRRHEASHARERPHKCTMCDMAFAQAEGLVAHRRIHAREVLFQCVDCGAEFARADYLRGHQRTHTGERPHGCA--ECGKTFARSGSLRAH</Hsp_qseq>
      <Hsp_hseq>GTQNTR-AVKKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAH</Hsp_hseq>
      <Hsp_midline>G Q T  A +  +C  C ++   A  L  H  SH   +P  C  C   F Q   L  H R+H  E  + C  C  +F+R   L  H  TH   +P  C    C KTF + G+++AH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>67.3958</Hsp_bit-score>
      <Hsp_score>163</Hsp_score>
      <Hsp_evalue>1.06766e-13</Hsp_evalue>
      <Hsp_query-from>415</Hsp_query-from>
      <Hsp_query-to>624</Hsp_query-to>
      <Hsp_hit-from>582</Hsp_hit-from>
      <Hsp_hit-to>650</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>41</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>70</Hsp_align-len>
      <Hsp_qseq>RGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRRTHTGERPRS</Hsp_qseq>
      <Hsp_hseq>KGTQNTRAVKK-HECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYS</Hsp_hseq>
      <Hsp_midline>+G Q T   ++ H C  C + F+++  L  H R+H G +P+ C  CG+ F + G L TH R HTGE+P S</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>5</Hsp_num>
      <Hsp_bit-score>60.4622</Hsp_bit-score>
      <Hsp_score>145</Hsp_score>
      <Hsp_evalue>2.71614e-11</Hsp_evalue>
      <Hsp_query-from>115</Hsp_query-from>
      <Hsp_query-to>426</Hsp_query-to>
      <Hsp_hit-from>593</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>46</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>106</Hsp_align-len>
      <Hsp_qseq>YRCPHCPYGADTVSVLIGHQATHDAAESRKCAECGKVLVDAEALRRHEASHARERPHKCTMCDMAFAQAEGLVAHRRIHAREVLFQCV--DCGAEFARADYLRGHQ</Hsp_qseq>
      <Hsp_hseq>HECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQ</Hsp_hseq>
      <Hsp_midline>+ CP+C       + L  H  +H   +   C  CGK       LR HE  H  E+P+ C +CD  F++   L AH   H +   F C   +C   F +   ++ HQ</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YNL027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:579580:581616:1 gene:YNL027W transcript:YNL027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRZ1 description:Transcription factor, activates transcription of stress response genes; nuclear localization is positively regulated by calcineurin-mediated dephosphorylation; rapidly localizes to the nucleus under blue light stress; can be activated in stochastic pulses of nuclear localization in response to calcium [Source:SGD;Acc:S000004972]</Hit_def>
  <Hit_accession>YNL027W</Hit_accession>
  <Hit_len>678</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>84.7297</Hsp_bit-score>
      <Hsp_score>208</Hsp_score>
      <Hsp_evalue>1.18016e-19</Hsp_evalue>
      <Hsp_query-from>367</Hsp_query-from>
      <Hsp_query-to>615</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>41</Hsp_identity>
      <Hsp_positive>50</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>92</Hsp_align-len>
      <Hsp_qseq>FQCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACG---------ECGRAFARSGALLTHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline>F C  CG +F R   L+ H RTHT ERP  C+ CGK FAR    + H   HTG++ Y CG          CG+ FARS AL  H +T +G R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>62.003</Hsp_bit-score>
      <Hsp_score>149</Hsp_score>
      <Hsp_evalue>7.03402e-12</Hsp_evalue>
      <Hsp_query-from>289</Hsp_query-from>
      <Hsp_query-to>531</Hsp_query-to>
      <Hsp_hit-from>571</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>43</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>90</Hsp_align-len>
      <Hsp_qseq>CTMCDMAFAQAEGLVAHRRIHAREVLFQCVDCGAEFARADYLRGHQRTHTGERPHGCA---------ECGKTFARSGSLRAHGRTHTGER</Hsp_qseq>
      <Hsp_hseq>CDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline>C +C   F +   L +H R H  E  F C  CG  FAR    + H+  HTG++ + C           CGK FARS +L  H +T +G R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>56.225</Hsp_bit-score>
      <Hsp_score>134</Hsp_score>
      <Hsp_evalue>6.90099e-10</Hsp_evalue>
      <Hsp_query-from>205</Hsp_query-from>
      <Hsp_query-to>447</Hsp_query-to>
      <Hsp_hit-from>571</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>41</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>90</Hsp_align-len>
      <Hsp_qseq>CAECGKVLVDAEALRRHEASHARERPHKCTMCDMAFAQAEGLVAHRRIHAREVLFQC---------VDCGAEFARADYLRGHQRTHTGER</Hsp_qseq>
      <Hsp_hseq>CDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline>C  CGK       L+ H  +H  ERP  C++C  AFA+      H  +H  +  + C           CG +FAR+D L  H +T +G R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YDR253C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:963990:964565:-1 gene:YDR253C transcript:YDR253C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MET32 description:Zinc-finger DNA-binding transcription factor; involved in transcriptional regulation of the methionine biosynthetic genes; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; lack of such a loop for MET31 may account for the differential actions of Met32p and Met31p; MET32 has a paralog, MET31, that arose from the whole genome duplication [Source:SGD;Acc:S000002661]</Hit_def>
  <Hit_accession>YDR253C</Hit_accession>
  <Hit_len>191</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>59.3066</Hsp_bit-score>
      <Hsp_score>142</Hsp_score>
      <Hsp_evalue>1.41796e-11</Hsp_evalue>
      <Hsp_query-from>427</Hsp_query-from>
      <Hsp_query-to>633</Hsp_query-to>
      <Hsp_hit-from>90</Hsp_hit-from>
      <Hsp_hit-to>158</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>69</Hsp_align-len>
      <Hsp_qseq>RTHTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRRTHTGERPRSRVL</Hsp_qseq>
      <Hsp_hseq>RNSTGEKRFKCAKCSLEFSRSSDLRRHEKTHFAILPNICPQCGKGFARKDALKRHYDTLTCRRNRTKLL</Hsp_hseq>
      <Hsp_midline>R  TGE+   CA+C   F+RS  LR H +TH    P  C +CG+ FAR  AL  H  T T  R R+++L</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>5.30022e-09</Hsp_evalue>
      <Hsp_query-from>340</Hsp_query-from>
      <Hsp_query-to>522</Hsp_query-to>
      <Hsp_hit-from>89</Hsp_hit-from>
      <Hsp_hit-to>149</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>61</Hsp_align-len>
      <Hsp_qseq>RRIHAREVLFQCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHT</Hsp_qseq>
      <Hsp_hseq>RRNSTGEKRFKCAKCSLEFSRSSDLRRHEKTHFAILPNICPQCGKGFARKDALKRHYDTLT</Hsp_hseq>
      <Hsp_midline>RR    E  F+C  C  EF+R+  LR H++TH    P+ C +CGK FAR  +L+ H  T T</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YDR216W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:895035:899006:1 gene:YDR216W transcript:YDR216W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADR1 description:Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization [Source:SGD;Acc:S000002624]</Hit_def>
  <Hit_accession>YDR216W</Hit_accession>
  <Hit_len>1323</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>60.8474</Hsp_bit-score>
      <Hsp_score>146</Hsp_score>
      <Hsp_evalue>1.99952e-11</Hsp_evalue>
      <Hsp_query-from>412</Hsp_query-from>
      <Hsp_query-to>609</Hsp_query-to>
      <Hsp_hit-from>90</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>40</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>68</Hsp_align-len>
      <Hsp_qseq>LRGHQRTHTGE-RPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTH-RRTHTG</Hsp_qseq>
      <Hsp_hseq>LRLNGRTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>LR + RT +G+ R   C  C + FAR   L+ H R+HT E+PY CG C R F R   L+ H ++ H+G</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>1.77165e-07</Hsp_evalue>
      <Hsp_query-from>367</Hsp_query-from>
      <Hsp_query-to>525</Hsp_query-to>
      <Hsp_hit-from>104</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>30</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>FQCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHG-RTHTG</Hsp_qseq>
      <Hsp_hseq>FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>F C  C   FAR ++L+ H R+HT E+P+ C  C + F R   L  H  + H+G</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>45.4394</Hsp_bit-score>
      <Hsp_score>106</Hsp_score>
      <Hsp_evalue>2.55706e-06</Hsp_evalue>
      <Hsp_query-from>493</Hsp_query-from>
      <Hsp_query-to>618</Hsp_query-to>
      <Hsp_hit-from>89</Hsp_hit-from>
      <Hsp_hit-to>131</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>28</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>43</Hsp_align-len>
      <Hsp_qseq>SLRAHGRTHTGE-RPYACGECGRAFARSGALLTHRRTHTGERP</Hsp_qseq>
      <Hsp_hseq>NLRLNGRTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKP</Hsp_hseq>
      <Hsp_midline>+LR +GRT +G+ R + C  C RAFAR   L  H R+HT E+P</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>44.2838</Hsp_bit-score>
      <Hsp_score>103</Hsp_score>
      <Hsp_evalue>6.77835e-06</Hsp_evalue>
      <Hsp_query-from>205</Hsp_query-from>
      <Hsp_query-to>354</Hsp_query-to>
      <Hsp_hit-from>106</Hsp_hit-from>
      <Hsp_hit-to>156</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>17</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>51</Hsp_align-len>
      <Hsp_qseq>CAECGKVLVDAEALRRHEASHARERPHKCTMCDMAFAQAEGLVAH-RRIHA</Hsp_qseq>
      <Hsp_hseq>CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHS</Hsp_hseq>
      <Hsp_midline>C  C +     E L+RH  SH  E+P+ C +C+  F + + L+ H ++IH+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YDR146C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:748613:750742:-1 gene:YDR146C transcript:YDR146C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWI5 description:Transcription factor that recruits Mediator and Swi/Snf complexes; activates transcription of genes expressed at the M/G1 phase boundary and in G1 phase; required for expression of the HO gene controlling mating type switching; localization to nucleus occurs during G1 and appears to be regulated by phosphorylation by Cdc28p kinase; SWI5 has a paralog, ACE2, that arose from the whole genome duplication [Source:SGD;Acc:S000002553]</Hit_def>
  <Hit_accession>YDR146C</Hit_accession>
  <Hit_len>709</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>59.3066</Hsp_bit-score>
      <Hsp_score>142</Hsp_score>
      <Hsp_evalue>5.63827e-11</Hsp_evalue>
      <Hsp_query-from>367</Hsp_query-from>
      <Hsp_query-to>594</Hsp_query-to>
      <Hsp_hit-from>550</Hsp_hit-from>
      <Hsp_hit-to>627</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>43</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>80</Hsp_align-len>
      <Hsp_qseq>FQCV--DCGAEFARADYLRGHQRTHTGERPHGCAE--CGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHR</Hsp_qseq>
      <Hsp_hseq>FECLFPGCTKTFKRRYNIRSHIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSHQ-EKAYAC-PCGKKFNREDALVVHR</Hsp_hseq>
      <Hsp_midline>F+C+   C   F R   +R H +TH  +RP+ C    C K F R+  L  H ++H  E+ YAC  CG+ F R  AL+ HR</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>4.96596e-08</Hsp_evalue>
      <Hsp_query-from>415</Hsp_query-from>
      <Hsp_query-to>603</Hsp_query-to>
      <Hsp_hit-from>535</Hsp_hit-from>
      <Hsp_hit-to>604</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>38</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>70</Hsp_align-len>
      <Hsp_qseq>RGHQRTHTGERPHGCAEC-----GKTFARSGSLRAHGRTHTGERPYACGE--CGRAFARSGALLTHRRTH</Hsp_qseq>
      <Hsp_hseq>RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSH</Hsp_hseq>
      <Hsp_midline>RG    +  E P    EC      KTF R  ++R+H +TH  +RPY+C    C +AF R+  L+ H+++H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>45.0542</Hsp_bit-score>
      <Hsp_score>105</Hsp_score>
      <Hsp_evalue>3.78113e-06</Hsp_evalue>
      <Hsp_query-from>214</Hsp_query-from>
      <Hsp_query-to>426</Hsp_query-to>
      <Hsp_hit-from>557</Hsp_hit-from>
      <Hsp_hit-to>627</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>73</Hsp_align-len>
      <Hsp_qseq>CGKVLVDAEALRRHEASHARERPHKCTM--CDMAFAQAEGLVAHRRIHAREVLFQCVDCGAEFARADYLRGHQ</Hsp_qseq>
      <Hsp_hseq>CTKTFKRRYNIRSHIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSH-QEKAYAC-PCGKKFNREDALVVHR</Hsp_hseq>
      <Hsp_midline>C K       +R H  +H  +RP+ C    CD AF +   L+ H++ H +E  + C  CG +F R D L  H+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YGL209W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:95858:97006:1 gene:YGL209W transcript:YGL209W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG2 description:Zinc finger transcriptional repressor; cooperates with Mig1p in glucose-induced gene repression; under low glucose conditions relocalizes to mitochondrion, where it interacts with Ups1p, antagonizes mitochondrial fission factor Dnm1p, indicative of a role in mitochondrial fusion or regulating morphology; regulates filamentous growth in response to glucose depletion; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000003177]</Hit_def>
  <Hit_accession>YGL209W</Hit_accession>
  <Hit_len>382</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>58.5362</Hsp_bit-score>
      <Hsp_score>140</Hsp_score>
      <Hsp_evalue>9.12606e-11</Hsp_evalue>
      <Hsp_query-from>367</Hsp_query-from>
      <Hsp_query-to>528</Hsp_query-to>
      <Hsp_hit-from>17</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>38</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>56</Hsp_align-len>
      <Hsp_qseq>FQCVDCGAEFARADYLRGHQRTHTGERPHGCA--ECGKTFARSGSLRAHGRTHTGE</Hsp_qseq>
      <Hsp_hseq>FRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQ</Hsp_hseq>
      <Hsp_midline>F+C  C   F R ++ + H RTHTGE+PH CA   CGK+F+RS  L+ H RTHTG+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>51.2174</Hsp_bit-score>
      <Hsp_score>121</Hsp_score>
      <Hsp_evalue>2.64457e-08</Hsp_evalue>
      <Hsp_query-from>442</Hsp_query-from>
      <Hsp_query-to>621</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>75</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>62</Hsp_align-len>
      <Hsp_qseq>ERPHGCAECGKTFARSGSLRAHGRTHTGERPYACG--ECGRAFARSGALLTHRRTHTGERPR</Hsp_qseq>
      <Hsp_hseq>NRPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQSQR</Hsp_hseq>
      <Hsp_midline> RP  C  C + F R    + H RTHTGE+P+ C    CG++F+RS  L  H RTHTG+  R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YPL038W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:480535:481068:1 gene:YPL038W transcript:YPL038W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MET31 description:Zinc-finger DNA-binding transcription factor; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; involved in transcriptional regulation of the methionine biosynthetic genes; feedforward loop controlling expression of MET32 and the lack of such a loop for MET31 may account for the differential actions of Met31p and Met32p; MET31 has a paralog, MET32, that arose from the whole genome duplication [Source:SGD;Acc:S000005959]</Hit_def>
  <Hit_accession>YPL038W</Hit_accession>
  <Hit_len>177</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.0694</Hsp_bit-score>
      <Hsp_score>131</Hsp_score>
      <Hsp_evalue>4.36543e-10</Hsp_evalue>
      <Hsp_query-from>418</Hsp_query-from>
      <Hsp_query-to>630</Hsp_query-to>
      <Hsp_hit-from>84</Hsp_hit-from>
      <Hsp_hit-to>154</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>71</Hsp_align-len>
      <Hsp_qseq>GHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRRTHTGERPRSRV</Hsp_qseq>
      <Hsp_hseq>GNNHSKEGAQLYSCAKCQLKFSRSSDLRRHEKVHSLVLPHICSNCGKGFARKDALKRHSNTLTCQRNRKKL</Hsp_hseq>
      <Hsp_midline>G+  +  G + + CA+C   F+RS  LR H + H+   P+ C  CG+ FAR  AL  H  T T +R R ++</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>52.7582</Hsp_bit-score>
      <Hsp_score>125</Hsp_score>
      <Hsp_evalue>2.87051e-09</Hsp_evalue>
      <Hsp_query-from>364</Hsp_query-from>
      <Hsp_query-to>531</Hsp_query-to>
      <Hsp_hit-from>94</Hsp_hit-from>
      <Hsp_hit-to>149</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>56</Hsp_align-len>
      <Hsp_qseq>LFQCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGER</Hsp_qseq>
      <Hsp_hseq>LYSCAKCQLKFSRSSDLRRHEKVHSLVLPHICSNCGKGFARKDALKRHSNTLTCQR</Hsp_hseq>
      <Hsp_midline>L+ C  C  +F+R+  LR H++ H+   PH C+ CGK FAR  +L+ H  T T +R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YLR131C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:404510:406822:-1 gene:YLR131C transcript:YLR131C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACE2 description:Transcription factor required for septum destruction after cytokinesis; phosphorylation by Cbk1p blocks nuclear exit during M/G1 transition, causing localization to daughter cell nuclei, and also increases Ace2p activity; phosphorylation by Cdc28p and Pho85p prevents nuclear import during cell cycle phases other than cytokinesis; part of RAM network that regulates cellular polarity and morphogenesis; ACE2 has a paralog, SWI5, that arose from the whole genome duplication [Source:SGD;Acc:S000004121]</Hit_def>
  <Hit_accession>YLR131C</Hit_accession>
  <Hit_len>770</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.225</Hsp_bit-score>
      <Hsp_score>134</Hsp_score>
      <Hsp_evalue>6.28187e-10</Hsp_evalue>
      <Hsp_query-from>364</Hsp_query-from>
      <Hsp_query-to>594</Hsp_query-to>
      <Hsp_hit-from>602</Hsp_hit-from>
      <Hsp_hit-to>680</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>43</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>81</Hsp_align-len>
      <Hsp_qseq>LFQCV--DCGAEFARADYLRGHQRTHTGERPHGC--AECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHR</Hsp_qseq>
      <Hsp_hseq>LFECLYPNCNKVFKRRYNIRSHIQTHLQDRPYSCDFPGCTKAFVRNHDLIRHKISHNAKK-YIC-PCGKRFNREDALMVHR</Hsp_hseq>
      <Hsp_midline>LF+C+  +C   F R   +R H +TH  +RP+ C    C K F R+  L  H  +H  ++ Y C  CG+ F R  AL+ HR</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>47.3654</Hsp_bit-score>
      <Hsp_score>111</Hsp_score>
      <Hsp_evalue>6.96415e-07</Hsp_evalue>
      <Hsp_query-from>466</Hsp_query-from>
      <Hsp_query-to>615</Hsp_query-to>
      <Hsp_hit-from>610</Hsp_hit-from>
      <Hsp_hit-to>661</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>19</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>CGKTFARSGSLRAHGRTHTGERPYACG--ECGRAFARSGALLTHRRTHTGER</Hsp_qseq>
      <Hsp_hseq>CNKVFKRRYNIRSHIQTHLQDRPYSCDFPGCTKAFVRNHDLIRHKISHNAKK</Hsp_hseq>
      <Hsp_midline>C K F R  ++R+H +TH  +RPY+C    C +AF R+  L+ H+ +H  ++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YPR186C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:909733:911022:-1 gene:YPR186C transcript:YPR186C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PZF1 description:Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA [Source:SGD;Acc:S000006390]</Hit_def>
  <Hit_accession>YPR186C</Hit_accession>
  <Hit_len>429</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.8398</Hsp_bit-score>
      <Hsp_score>133</Hsp_score>
      <Hsp_evalue>7.31971e-10</Hsp_evalue>
      <Hsp_query-from>106</Hsp_query-from>
      <Hsp_query-to>600</Hsp_query-to>
      <Hsp_hit-from>46</Hsp_hit-from>
      <Hsp_hit-to>217</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>45</Hsp_identity>
      <Hsp_positive>65</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>173</Hsp_align-len>
      <Hsp_qseq>PVVYRCPH--CPYGADTVSVLIGHQ-ATHDAAESRKCAECGKVLVDAEALRRHEASHARERPHKCTMCDMAFAQAEGLVAHRRIHAREVLFQCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTG---ERPYACGECG--RAFARSGALLTHRRT</Hsp_qseq>
      <Hsp_hseq>PKTYFCDYDGCDKAFTRPSILTEHQLSVHQGLRAFQCDKCAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHTKSFICPEEGCNLRFYKHPQLRAHILS-VHLHKLTCPHCNKSFQRPYRLRNHISKHHDPEVENPYQCTFAGCCKEFRIWSQLQSHIKN</Hsp_hseq>
      <Hsp_midline>P  Y C +  C       S+L  HQ + H    + +C +C K  V    L RH  +H+  +P +C+ C       + L  H   H +  +     C   F +   LR H  +        C  C K+F R   LR H   H     E PY C   G  + F     L +H + </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>51.6026</Hsp_bit-score>
      <Hsp_score>122</Hsp_score>
      <Hsp_evalue>1.88308e-08</Hsp_evalue>
      <Hsp_query-from>382</Hsp_query-from>
      <Hsp_query-to>606</Hsp_query-to>
      <Hsp_hit-from>56</Hsp_hit-from>
      <Hsp_hit-to>131</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>76</Hsp_align-len>
      <Hsp_qseq>CGAEFARADYLRGHQRT-HTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRRTHT</Hsp_qseq>
      <Hsp_hseq>CDKAFTRPSILTEHQLSVHQGLRAFQCDKCAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHT</Hsp_hseq>
      <Hsp_midline>C   F R   L  HQ + H G R   C +C K+F +   L  H  TH+  +P+ C  CG+       L  H  THT</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YGL254W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:22304:23203:1 gene:YGL254W transcript:YGL254W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FZF1 description:Transcription factor involved in sulfite metabolism; sole identified regulatory target is SSU1; overexpression suppresses sulfite-sensitivity of many unrelated mutants due to hyperactivation of SSU1, contains five zinc fingers; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003223]</Hit_def>
  <Hit_accession>YGL254W</Hit_accession>
  <Hit_len>299</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.4546</Hsp_bit-score>
      <Hsp_score>132</Hsp_score>
      <Hsp_evalue>7.86828e-10</Hsp_evalue>
      <Hsp_query-from>382</Hsp_query-from>
      <Hsp_query-to>603</Hsp_query-to>
      <Hsp_hit-from>19</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>76</Hsp_align-len>
      <Hsp_qseq>CGAEFARADYLRGHQRTHTGERPHGCAE--CGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRRTH</Hsp_qseq>
      <Hsp_hseq>CEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>C   + R   L+ HQ +HT ++P+ C E  CGK F R   LR H  TH+  +P AC  C + F  +  L  H  +H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>5.24731e-09</Hsp_evalue>
      <Hsp_query-from>94</Hsp_query-from>
      <Hsp_query-to>603</Hsp_query-to>
      <Hsp_hit-from>5</Hsp_hit-from>
      <Hsp_hit-to>179</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>48</Hsp_identity>
      <Hsp_positive>76</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>178</Hsp_align-len>
      <Hsp_qseq>GRTEPVVYRCPH--CPYGADTVSVLIGHQATHDAAESRKCAE--CGKVLVDAEALRRHEASHARERPHKCTMCDMAFAQAEGLVAHRRIHAREV-LFQCVDCGAEFARADY---LRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRRTH</Hsp_qseq>
      <Hsp_hseq>GRTKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSHERKSKLASRIDRKHEGVNANVKAELNGKEGGFDPKLPSGSPMCGEEFSQ-GHLPGYDDMQVLQCPYK--SCQKVTSFNDDLINHMLQH</Hsp_hseq>
      <Hsp_midline>GRT+   Y+C    C    +  S+L  HQ +H   +   C E  CGK  +    LR H+ +H++ +P  CT+C   F   + L  H   H R+  L   +D   E   A+    L G +     + P G   CG+ F++ G L  +      + PY    C +  + +  L+ H   H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>45.0542</Hsp_bit-score>
      <Hsp_score>105</Hsp_score>
      <Hsp_evalue>2.93719e-06</Hsp_evalue>
      <Hsp_query-from>466</Hsp_query-from>
      <Hsp_query-to>624</Hsp_query-to>
      <Hsp_hit-from>19</Hsp_hit-from>
      <Hsp_hit-to>73</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>CGKTFARSGSLRAHGRTHTGERPYACGE--CGRAFARSGALLTHRRTHTGERPRS</Hsp_qseq>
      <Hsp_hseq>CEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKA</Hsp_hseq>
      <Hsp_midline>C K + R   L+ H  +HT ++PY C E  CG+ F R   L  H+ TH+  +P++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YMR037C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:344403:346517:-1 gene:YMR037C transcript:YMR037C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN2 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; relative distribution to nucleus increases upon DNA replication stress [Source:SGD;Acc:S000004640]</Hit_def>
  <Hit_accession>YMR037C</Hit_accession>
  <Hit_len>704</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.8398</Hsp_bit-score>
      <Hsp_score>133</Hsp_score>
      <Hsp_evalue>9.04816e-10</Hsp_evalue>
      <Hsp_query-from>442</Hsp_query-from>
      <Hsp_query-to>603</Hsp_query-to>
      <Hsp_hit-from>644</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>ERPHGCAECGKTFARSGSLRAHGRT-HTGERPYACGECGRAFARSGALLTHRRTH</Hsp_qseq>
      <Hsp_hseq>EKPFHCHICPKSFKRSEHLKRHVRSVHSNERPFACHICDKKFSRSDNLSQHIKTH</Hsp_hseq>
      <Hsp_midline>E+P  C  C K+F RS  L+ H R+ H+ ERP+AC  C + F+RS  L  H +TH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.8322</Hsp_bit-score>
      <Hsp_score>120</Hsp_score>
      <Hsp_evalue>3.75107e-08</Hsp_evalue>
      <Hsp_query-from>367</Hsp_query-from>
      <Hsp_query-to>519</Hsp_query-to>
      <Hsp_hit-from>647</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>FQCVDCGAEFARADYLRGHQRT-HTGERPHGCAECGKTFARSGSLRAHGRTH</Hsp_qseq>
      <Hsp_hseq>FHCHICPKSFKRSEHLKRHVRSVHSNERPFACHICDKKFSRSDNLSQHIKTH</Hsp_hseq>
      <Hsp_midline>F C  C   F R+++L+ H R+ H+ ERP  C  C K F+RS +L  H +TH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YJR127C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:658917:663059:-1 gene:YJR127C transcript:YJR127C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSF2 description:Zinc-finger protein; involved in transcriptional control of both nuclear and mitochondrial genes, many of which specify products required for glycerol-based growth, respiration, and other functions; RSF2 has a paralog, TDA9, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000003888]</Hit_def>
  <Hit_accession>YJR127C</Hit_accession>
  <Hit_len>1380</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.9138</Hsp_bit-score>
      <Hsp_score>128</Hsp_score>
      <Hsp_evalue>4.60452e-09</Hsp_evalue>
      <Hsp_query-from>445</Hsp_query-from>
      <Hsp_query-to>597</Hsp_query-to>
      <Hsp_hit-from>149</Hsp_hit-from>
      <Hsp_hit-to>199</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>51</Hsp_align-len>
      <Hsp_qseq>RPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRR</Hsp_qseq>
      <Hsp_hseq>RPFLCPTCTRGFVRQEHLKRHQHSHTREKPYLCIFCGRCFARRDLVLRHQQ</Hsp_hseq>
      <Hsp_midline>RP  C  C + F R   L+ H  +HT E+PY C  CGR FAR   +L H++</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>46.9802</Hsp_bit-score>
      <Hsp_score>110</Hsp_score>
      <Hsp_evalue>7.81452e-07</Hsp_evalue>
      <Hsp_query-from>367</Hsp_query-from>
      <Hsp_query-to>507</Hsp_query-to>
      <Hsp_hit-from>151</Hsp_hit-from>
      <Hsp_hit-to>197</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>19</Hsp_identity>
      <Hsp_positive>27</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>47</Hsp_align-len>
      <Hsp_qseq>FQCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAH</Hsp_qseq>
      <Hsp_hseq>FLCPTCTRGFVRQEHLKRHQHSHTREKPYLCIFCGRCFARRDLVLRH</Hsp_hseq>
      <Hsp_midline>F C  C   F R ++L+ HQ +HT E+P+ C  CG+ FAR   +  H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>46.9802</Hsp_bit-score>
      <Hsp_score>110</Hsp_score>
      <Hsp_evalue>8.18375e-07</Hsp_evalue>
      <Hsp_query-from>205</Hsp_query-from>
      <Hsp_query-to>354</Hsp_query-to>
      <Hsp_hit-from>153</Hsp_hit-from>
      <Hsp_hit-to>203</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>19</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>51</Hsp_align-len>
      <Hsp_qseq>CAECGKVLVDAEALRRHEASHARERPHKCTMCDMAFAQAEGLVAH-RRIHA</Hsp_qseq>
      <Hsp_hseq>CPTCTRGFVRQEHLKRHQHSHTREKPYLCIFCGRCFARRDLVLRHQQKLHA</Hsp_hseq>
      <Hsp_midline>C  C +  V  E L+RH+ SH RE+P+ C  C   FA+ + ++ H +++HA</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>45.8246</Hsp_bit-score>
      <Hsp_score>107</Hsp_score>
      <Hsp_evalue>2.32003e-06</Hsp_evalue>
      <Hsp_query-from>271</Hsp_query-from>
      <Hsp_query-to>441</Hsp_query-to>
      <Hsp_hit-from>147</Hsp_hit-from>
      <Hsp_hit-to>204</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>28</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>RERPHKCTMCDMAFAQAEGLVAHRRIHAREVLFQCVDCGAEFARADY-LRGHQRTHTG</Hsp_qseq>
      <Hsp_hseq>KPRPFLCPTCTRGFVRQEHLKRHQHSHTREKPYLCIFCGRCFARRDLVLRHQQKLHAA</Hsp_hseq>
      <Hsp_midline>+ RP  C  C   F + E L  H+  H RE  + C+ CG  FAR D  LR  Q+ H  </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YER028C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:210692:211876:-1 gene:YER028C transcript:YER028C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG3 description:Transcriptional regulator; partially nonfunctional in S288C strains but has a major role in catabolite repression and ethanol response in some other strains; involved in response to toxic agents; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p, allowing induction of damage response genesenvironment [Source:SGD;Acc:S000000830]</Hit_def>
  <Hit_accession>YER028C</Hit_accession>
  <Hit_len>394</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>5.42778e-09</Hsp_evalue>
      <Hsp_query-from>406</Hsp_query-from>
      <Hsp_query-to>630</Hsp_query-to>
      <Hsp_hit-from>2</Hsp_hit-from>
      <Hsp_hit-to>78</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>41</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>77</Hsp_align-len>
      <Hsp_qseq>DYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTHTGERPYACGE--CGRAFARSGALLTHRRTHTGERPRSRV</Hsp_qseq>
      <Hsp_hseq>NYLRDRFPPDNDQRPFRCEICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHTKGVQRRRI</Hsp_hseq>
      <Hsp_midline>+YLR        +RP  C  C + F R    + HGRTHTGE+P+ C    C ++F+RS  L  H RTHT    R R+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>4.8772e-08</Hsp_evalue>
      <Hsp_query-from>367</Hsp_query-from>
      <Hsp_query-to>522</Hsp_query-to>
      <Hsp_hit-from>17</Hsp_hit-from>
      <Hsp_hit-to>70</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>FQCVDCGAEFARADYLRGHQRTHTGERPHGCAE--CGKTFARSGSLRAHGRTHT</Hsp_qseq>
      <Hsp_hseq>FRCEICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHT</Hsp_hseq>
      <Hsp_midline>F+C  C   F R ++ + H RTHTGE+PH C    C K+F+RS  L+ H RTHT</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YML081W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:104777:108532:1 gene:YML081W transcript:YML081W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDA9 description:Transcription factor that regulates acetate production; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene; TDA9 has a paralog, RSF2, that arose from the whole genome duplication [Source:SGD;Acc:S000004546]</Hit_def>
  <Hit_accession>YML081W</Hit_accession>
  <Hit_len>1251</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.5286</Hsp_bit-score>
      <Hsp_score>127</Hsp_score>
      <Hsp_evalue>6.4344e-09</Hsp_evalue>
      <Hsp_query-from>445</Hsp_query-from>
      <Hsp_query-to>594</Hsp_query-to>
      <Hsp_hit-from>59</Hsp_hit-from>
      <Hsp_hit-to>108</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>28</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>50</Hsp_align-len>
      <Hsp_qseq>RPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHR</Hsp_qseq>
      <Hsp_hseq>RPFLCHICTRGFVRQEHLKRHQRAHTNEKPFLCVFCGRCFARRDLVLRHQ</Hsp_hseq>
      <Hsp_midline>RP  C  C + F R   L+ H R HT E+P+ C  CGR FAR   +L H+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>3.30579e-07</Hsp_evalue>
      <Hsp_query-from>367</Hsp_query-from>
      <Hsp_query-to>525</Hsp_query-to>
      <Hsp_hit-from>61</Hsp_hit-from>
      <Hsp_hit-to>114</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>FQCVDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSG-SLRAHGRTHTG</Hsp_qseq>
      <Hsp_hseq>FLCHICTRGFVRQEHLKRHQRAHTNEKPFLCVFCGRCFARRDLVLRHQHKLHSA</Hsp_hseq>
      <Hsp_midline>F C  C   F R ++L+ HQR HT E+P  C  CG+ FAR    LR   + H+ </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>4.65484e-07</Hsp_evalue>
      <Hsp_query-from>271</Hsp_query-from>
      <Hsp_query-to>426</Hsp_query-to>
      <Hsp_hit-from>57</Hsp_hit-from>
      <Hsp_hit-to>108</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>27</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>RERPHKCTMCDMAFAQAEGLVAHRRIHAREVLFQCVDCGAEFARADYLRGHQ</Hsp_qseq>
      <Hsp_hseq>KPRPFLCHICTRGFVRQEHLKRHQRAHTNEKPFLCVFCGRCFARRDLVLRHQ</Hsp_hseq>
      <Hsp_midline>+ RP  C +C   F + E L  H+R H  E  F CV CG  FAR D +  HQ</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YGL035C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:431548:433062:-1 gene:YGL035C transcript:YGL035C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG1 description:Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state [Source:SGD;Acc:S000003003]</Hit_def>
  <Hit_accession>YGL035C</Hit_accession>
  <Hit_len>504</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>5.12186e-08</Hsp_evalue>
      <Hsp_query-from>445</Hsp_query-from>
      <Hsp_query-to>627</Hsp_query-to>
      <Hsp_hit-from>36</Hsp_hit-from>
      <Hsp_hit-to>98</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>63</Hsp_align-len>
      <Hsp_qseq>RPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECG--RAFARSGALLTHRRTHTGERPRSR</Hsp_qseq>
      <Hsp_hseq>RPHACPICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRIHTNSHPRGK</Hsp_hseq>
      <Hsp_midline>RPH C  C + F R      H R HTGE+P+AC   G  + F+RS  L  HRR HT   PR +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>17</Hit_num>
  <Hit_id>YKL062W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:323228:325120:1 gene:YKL062W transcript:YKL062W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN4 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes, inducing gene expression; involved in diauxic shift [Source:SGD;Acc:S000001545]</Hit_def>
  <Hit_accession>YKL062W</Hit_accession>
  <Hit_len>630</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>6.69378e-08</Hsp_evalue>
      <Hsp_query-from>427</Hsp_query-from>
      <Hsp_query-to>603</Hsp_query-to>
      <Hsp_hit-from>565</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>60</Hsp_align-len>
      <Hsp_qseq>RTHTGERPHGCAECGKTFARSGSLRAHGRT-HTGERPYACGECGRAFARSGALLTHRRTH</Hsp_qseq>
      <Hsp_hseq>NNYDKNKPFKCKDCEKAFRRSEHLKRHIRSVHSTERPFACMFCEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline>  +   +P  C +C K F RS  L+ H R+ H+ ERP+AC  C + F+RS  L  H +TH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>49.2914</Hsp_bit-score>
      <Hsp_score>116</Hsp_score>
      <Hsp_evalue>1.31895e-07</Hsp_evalue>
      <Hsp_query-from>367</Hsp_query-from>
      <Hsp_query-to>519</Hsp_query-to>
      <Hsp_hit-from>573</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>FQCVDCGAEFARADYLRGHQRT-HTGERPHGCAECGKTFARSGSLRAHGRTH</Hsp_qseq>
      <Hsp_hseq>FKCKDCEKAFRRSEHLKRHIRSVHSTERPFACMFCEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline>F+C DC   F R+++L+ H R+ H+ ERP  C  C K F+RS +L  H +TH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>45.8246</Hsp_bit-score>
      <Hsp_score>107</Hsp_score>
      <Hsp_evalue>1.89808e-06</Hsp_evalue>
      <Hsp_query-from>262</Hsp_query-from>
      <Hsp_query-to>435</Hsp_query-to>
      <Hsp_hit-from>566</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>SHARERPHKCTMCDMAFAQAEGLVAH-RRIHAREVLFQCVDCGAEFARADYLRGHQRTH</Hsp_qseq>
      <Hsp_hseq>NYDKNKPFKCKDCEKAFRRSEHLKRHIRSVHSTERPFACMFCEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline>++ + +P KC  C+ AF ++E L  H R +H+ E  F C+ C  +F+R+D L  H +TH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>18</Hit_num>
  <Hit_id>YMR182C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:624532:625167:-1 gene:YMR182C transcript:YMR182C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RGM1 description:Putative zinc finger DNA binding transcription factor; contains two N-terminal C2H2 zinc fingers and C-terminal proline rich domain; overproduction impairs cell growth and induces expression of genes involved in monosaccharide catabolism and aldehyde metabolism; regulates expression of of Y&apos; telomeric elements and subtelomeric COS genes; relocalizes to the cytosol in response to hypoxia; RGM1 has a paralog, USV1, that arose from the whole genome duplication [Source:SGD;Acc:S000004794]</Hit_def>
  <Hit_accession>YMR182C</Hit_accession>
  <Hit_len>211</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.2098</Hsp_bit-score>
      <Hsp_score>108</Hsp_score>
      <Hsp_evalue>7.37386e-07</Hsp_evalue>
      <Hsp_query-from>367</Hsp_query-from>
      <Hsp_query-to>507</Hsp_query-to>
      <Hsp_hit-from>19</Hsp_hit-from>
      <Hsp_hit-to>68</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>50</Hsp_align-len>
      <Hsp_qseq>FQCV---DCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAH</Hsp_qseq>
      <Hsp_hseq>YRCVGYPDCNMSFNRTEHLARHIRKHTGEKPFQCNICLKFFSRIDNLRQH</Hsp_hseq>
      <Hsp_midline>++CV   DC   F R ++L  H R HTGE+P  C  C K F+R  +LR H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>19</Hit_num>
  <Hit_id>YDR096W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:637139:639823:1 gene:YDR096W transcript:YDR096W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GIS1 description:Histone demethylase and transcription factor; regulates genes during nutrient limitation; activity modulated by proteasome-mediated proteolysis; has JmjC and JmjN domain in N-terminus that interact, promoting stability and proper transcriptional activity; contains two transactivating domains downstream of Jmj domains and a C-terminal DNA binding domain; relocalizes to the cytosol in response to hypoxia; GIS1 has a paralog, RPH1, that arose from the whole genome duplication [Source:SGD;Acc:S000002503]</Hit_def>
  <Hit_accession>YDR096W</Hit_accession>
  <Hit_len>894</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.9802</Hsp_bit-score>
      <Hsp_score>110</Hsp_score>
      <Hsp_evalue>7.69012e-07</Hsp_evalue>
      <Hsp_query-from>364</Hsp_query-from>
      <Hsp_query-to>507</Hsp_query-to>
      <Hsp_hit-from>827</Hsp_hit-from>
      <Hsp_hit-to>875</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>17</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>49</Hsp_align-len>
      <Hsp_qseq>LFQCVDCGAEFARADYLRGHQRT-HTGERPHGCAECGKTFARSGSLRAH</Hsp_qseq>
      <Hsp_hseq>IYICRECNRQFSSGHHLTRHKKSVHSGEKPHSCPRCGKRFKRRDHVLQH</Hsp_hseq>
      <Hsp_midline>++ C +C  +F+   +L  H+++ H+GE+PH C  CGK F R   +  H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>45.0542</Hsp_bit-score>
      <Hsp_score>105</Hsp_score>
      <Hsp_evalue>4.04525e-06</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>591</Hsp_query-to>
      <Hsp_hit-from>830</Hsp_hit-from>
      <Hsp_hit-to>875</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>17</Hsp_identity>
      <Hsp_positive>27</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>46</Hsp_align-len>
      <Hsp_qseq>CAECGKTFARSGSLRAHGRT-HTGERPYACGECGRAFARSGALLTH</Hsp_qseq>
      <Hsp_hseq>CRECNRQFSSGHHLTRHKKSVHSGEKPHSCPRCGKRFKRRDHVLQH</Hsp_hseq>
      <Hsp_midline>C EC + F+    L  H ++ H+GE+P++C  CG+ F R   +L H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>20</Hit_num>
  <Hit_id>YER169W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:523369:525759:1 gene:YER169W transcript:YER169W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPH1 description:JmjC domain-containing histone demethylase; targets tri- and dimethylated H3K36; associates with actively transcribed regions and promotes elongation; repressor of autophagy-related genes in nutrient-replete conditions; damage-responsive repressor of PHR1; phosphorylated by the Rad53p-dependent DNA damage checkpoint pathway and by a Rim1p-mediated event during starvation; target of stress-induced hormesis; RPH1 has a paralog, GIS1, that arose from the whole genome duplication [Source:SGD;Acc:S000000971]</Hit_def>
  <Hit_accession>YER169W</Hit_accession>
  <Hit_len>796</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.595</Hsp_bit-score>
      <Hsp_score>109</Hsp_score>
      <Hsp_evalue>1.01396e-06</Hsp_evalue>
      <Hsp_query-from>346</Hsp_query-from>
      <Hsp_query-to>507</Hsp_query-to>
      <Hsp_hit-from>702</Hsp_hit-from>
      <Hsp_hit-to>756</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>17</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>IHAREVLFQCVDCGAEFARADYLRGHQRT-HTGERPHGCAECGKTFARSGSLRAH</Hsp_qseq>
      <Hsp_hseq>LSGKNKIYICKECQRKFSSGHHLTRHKKSVHSGEKPHSCPKCGKRFKRRDHVLQH</Hsp_hseq>
      <Hsp_midline>+  +  ++ C +C  +F+   +L  H+++ H+GE+PH C +CGK F R   +  H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>45.0542</Hsp_bit-score>
      <Hsp_score>105</Hsp_score>
      <Hsp_evalue>3.68861e-06</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>591</Hsp_query-to>
      <Hsp_hit-from>711</Hsp_hit-from>
      <Hsp_hit-to>756</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>17</Hsp_identity>
      <Hsp_positive>28</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>46</Hsp_align-len>
      <Hsp_qseq>CAECGKTFARSGSLRAHGRT-HTGERPYACGECGRAFARSGALLTH</Hsp_qseq>
      <Hsp_hseq>CKECQRKFSSGHHLTRHKKSVHSGEKPHSCPKCGKRFKRRDHVLQH</Hsp_hseq>
      <Hsp_midline>C EC + F+    L  H ++ H+GE+P++C +CG+ F R   +L H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>21</Hit_num>
  <Hit_id>YHL027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VIII:51111:52988:1 gene:YHL027W transcript:YHL027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RIM101 description:Cys2His2 zinc-finger transcriptional repressor; involved in alkaline responsive gene repression as part of adaptation to alkaline conditions; involved in cell wall assembly; required for alkaline pH-stimulated haploid invasive growth and sporulation; activated by alkaline-dependent proteolytic processing which results in removal of the C-terminal tail; similar to A. nidulans PacC [Source:SGD;Acc:S000001019]</Hit_def>
  <Hit_accession>YHL027W</Hit_accession>
  <Hit_len>625</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.2098</Hsp_bit-score>
      <Hsp_score>108</Hsp_score>
      <Hsp_evalue>1.44945e-06</Hsp_evalue>
      <Hsp_query-from>286</Hsp_query-from>
      <Hsp_query-to>519</Hsp_query-to>
      <Hsp_hit-from>149</Hsp_hit-from>
      <Hsp_hit-to>234</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>38</Hsp_positive>
      <Hsp_gaps>10</Hsp_gaps>
      <Hsp_align-len>87</Hsp_align-len>
      <Hsp_qseq>KCTMCDMAFAQAEGLVAH-------RRIHAREVLFQC--VDCGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAHGRTH</Hsp_qseq>
      <Hsp_hseq>KWDNCGMIFNQPELLYNHLCHDHVGRKSH-KNLQLNCHWGDCTTKTEKRDHITSHLRVHVPLKPFGCSTCSKKFKRPQDLKKHLKIH</Hsp_hseq>
      <Hsp_midline>K   C M F Q E L  H       R+ H + +   C   DC  +  + D++  H R H   +P GC+ C K F R   L+ H + H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>22</Hit_num>
  <Hit_id>YPL230W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:115312:116487:1 gene:YPL230W transcript:YPL230W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:USV1 description:Putative transcription factor containing a C2H2 zinc finger; mutation affects transcriptional regulation of genes involved in growth on non-fermentable carbon sources, response to salt stress and cell wall biosynthesis; USV1 has a paralog, RGM1, that arose from the whole genome duplication [Source:SGD;Acc:S000006151]</Hit_def>
  <Hit_accession>YPL230W</Hit_accession>
  <Hit_len>391</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>45.4394</Hsp_bit-score>
      <Hsp_score>106</Hsp_score>
      <Hsp_evalue>2.07504e-06</Hsp_evalue>
      <Hsp_query-from>340</Hsp_query-from>
      <Hsp_query-to>507</Hsp_query-to>
      <Hsp_hit-from>32</Hsp_hit-from>
      <Hsp_hit-to>90</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>RRIHAREVLFQCVD---CGAEFARADYLRGHQRTHTGERPHGCAECGKTFARSGSLRAH</Hsp_qseq>
      <Hsp_hseq>RSKSARRKTFKCTGYDGCTMSFTRAEHLARHIRKHTGEKPFQCPACLKFFSRVDNLKQH</Hsp_hseq>
      <Hsp_midline>R   AR   F+C     C   F RA++L  H R HTGE+P  C  C K F+R  +L+ H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>23</Hit_num>
  <Hit_id>YGR067C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:622372:624786:-1 gene:YGR067C transcript:YGR067C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative protein of unknown function; contains a zinc finger motif similar to that of Adr1p [Source:SGD;Acc:S000003299]</Hit_def>
  <Hit_accession>YGR067C</Hit_accession>
  <Hit_len>804</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>45.8246</Hsp_bit-score>
      <Hsp_score>107</Hsp_score>
      <Hsp_evalue>2.26722e-06</Hsp_evalue>
      <Hsp_query-from>439</Hsp_query-from>
      <Hsp_query-to>600</Hsp_query-to>
      <Hsp_hit-from>4</Hsp_hit-from>
      <Hsp_hit-to>57</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>GERPHGCAECGKTFARSGSLRAHGRTHTGERPYACGECGRAFARSGALLTHRRT</Hsp_qseq>
      <Hsp_hseq>GQKKYICSFCLKPFSRSEHKIRHERSHAGVKPFQCQVCKHSFVRRDLLQRHIRT</Hsp_hseq>
      <Hsp_midline>G++ + C+ C K F+RS     H R+H G +P+ C  C  +F R   L  H RT</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>24</Hit_num>
  <Hit_id>YPR015C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:590283:591026:-1 gene:YPR015C transcript:YPR015C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative zinc finger transcription factor; binds DNA in sequence-specific manner; overexpression causes a cell cycle delay or arrest [Source:SGD;Acc:S000006219]</Hit_def>
  <Hit_accession>YPR015C</Hit_accession>
  <Hit_len>247</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>43.5134</Hsp_bit-score>
      <Hsp_score>101</Hsp_score>
      <Hsp_evalue>6.55423e-06</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>603</Hsp_query-to>
      <Hsp_hit-from>187</Hsp_hit-from>
      <Hsp_hit-to>237</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>27</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>51</Hsp_align-len>
      <Hsp_qseq>CAECGKTFARSGSLRAHGRTHTGERPYACG--ECGRAFARSGALLTHRRTH</Hsp_qseq>
      <Hsp_hseq>CPICGKVCSRPSTLRTHYLIHTGDTPFKCTWEHCNKSFNVKSNMLRHLRTH</Hsp_hseq>
      <Hsp_midline>C  CGK  +R  +LR H   HTG+ P+ C    C ++F     +L H RTH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>25</Hit_num>
  <Hit_id>YPR013C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:584632:585585:-1 gene:YPR013C transcript:YPR013C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CMR3 description:Putative zinc finger protein; YPR013C is not an essential gene [Source:SGD;Acc:S000006217]</Hit_def>
  <Hit_accession>YPR013C</Hit_accession>
  <Hit_len>317</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>43.8986</Hsp_bit-score>
      <Hsp_score>102</Hsp_score>
      <Hsp_evalue>6.58178e-06</Hsp_evalue>
      <Hsp_query-from>457</Hsp_query-from>
      <Hsp_query-to>633</Hsp_query-to>
      <Hsp_hit-from>256</Hsp_hit-from>
      <Hsp_hit-to>314</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>61</Hsp_align-len>
      <Hsp_qseq>CAECGKTFARSGSLRAHGRTHTGERPYACGE--CGRAFARSGALLTHRRTHTGERPRSRVL</Hsp_qseq>
      <Hsp_hseq>CPVCGKICSRPSTLKTHYLIHTGDTPFKCTWEGCTKSFNVKSNMLRHLKSH--ERKRNKVL</Hsp_hseq>
      <Hsp_midline>C  CGK  +R  +L+ H   HTG+ P+ C    C ++F     +L H ++H  ER R++VL</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>86</Statistics_hsp-len>
      <Statistics_eff-space>295654842</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>20</Iteration_iter-num>
  <Iteration_query-ID>Query_20</Iteration_query-ID>
  <Iteration_query-def>PMZ_0048343-RA transcript Note:&quot;Similar to Zscan20 Zinc finger and SCAN domain-containing protein 20 (Mus musculus)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0|0|2|0|320</Iteration_query-def>
  <Iteration_query-len>963</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YJL056C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:330431:333073:-1 gene:YJL056C transcript:YJL056C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZAP1 description:Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains [Source:SGD;Acc:S000003592]</Hit_def>
  <Hit_accession>YJL056C</Hit_accession>
  <Hit_len>880</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>75.0998</Hsp_bit-score>
      <Hsp_score>183</Hsp_score>
      <Hsp_evalue>2.27421e-15</Hsp_evalue>
      <Hsp_query-from>79</Hsp_query-from>
      <Hsp_query-to>351</Hsp_query-to>
      <Hsp_hit-from>758</Hsp_hit-from>
      <Hsp_hit-to>846</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>36</Hsp_identity>
      <Hsp_positive>51</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>92</Hsp_align-len>
      <Hsp_qseq>HMKRHRGRTEPLMYQCPHCP-AFADPRALRAHDRVHTGERPYGCTVCRRTFTQRRALAVHRRTHTGERPHACGACGRSFAQRRSLVVHQKVH</Hsp_qseq>
      <Hsp_hseq>HLKVH-SKYKP--YKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH</Hsp_hseq>
      <Hsp_midline>H+K H  + +P  Y+C  C   F+    L  H R H+GE+PY C +C + F    +L +H RTHTGE+P  C  CG+ F +  +L  H K H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>70.0922</Hsp_bit-score>
      <Hsp_score>170</Hsp_score>
      <Hsp_evalue>1.0359e-13</Hsp_evalue>
      <Hsp_query-from>37</Hsp_query-from>
      <Hsp_query-to>351</Hsp_query-to>
      <Hsp_hit-from>706</Hsp_hit-from>
      <Hsp_hit-to>818</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>40</Hsp_identity>
      <Hsp_positive>57</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>116</Hsp_align-len>
      <Hsp_qseq>VCDW-----VVVSPPALEDHMK---RHRGRTEPLMYQCP--HCP-AFADPRALRAHDRVHTGERPYGCTVCRRTFTQRRALAVHRRTHTGERPHACGACGRSFAQRRSLVVHQKVH</Hsp_qseq>
      <Hsp_hseq>ICQWDGCNKSFSSAQELNDHLEAVHLTRGKSE---YQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTH</Hsp_hseq>
      <Hsp_midline>+C W        S   L DH++     RG++E   YQC    C   F   + L  H +VH+  +PY C  C+R F+    L  H RTH+GE+P+ C  C + FA   SL +H + H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YOR113W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:534075:536819:1 gene:YOR113W transcript:YOR113W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AZF1 description:Zinc-finger transcription factor; involved in diauxic shift; in the presence of glucose, activates transcription of genes involved in growth and carbon metabolism; in nonfermentable carbon sources, activates transcription of genes involved in maintenance of cell wall integrity; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005639]</Hit_def>
  <Hit_accession>YOR113W</Hit_accession>
  <Hit_len>914</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>74.3294</Hsp_bit-score>
      <Hsp_score>181</Hsp_score>
      <Hsp_evalue>3.80868e-15</Hsp_evalue>
      <Hsp_query-from>16</Hsp_query-from>
      <Hsp_query-to>345</Hsp_query-to>
      <Hsp_hit-from>590</Hsp_hit-from>
      <Hsp_hit-to>699</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>58</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>113</Hsp_align-len>
      <Hsp_qseq>VTRIRCPVCDWVVVSPPALEDHMKRHRGRTEPLMYQCPHCPA-FADPRALRAHDRVHTGERPYGCTVCRRTFTQRRALAVHRRTHTGERPHACGA--CGRSFAQRRSLVVHQK</Hsp_qseq>
      <Hsp_hseq>VKKHECPYCHRLFSQATHLEVHVRSHIGY-KPFV--CDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQN</Hsp_hseq>
      <Hsp_midline>V +  CP C  +      LE H++ H G  +P +  C +C   F     LR H+R+HTGE+PY C +C + F+++  LA H  TH   +P  C    C ++F Q  ++  HQ </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>68.5514</Hsp_bit-score>
      <Hsp_score>166</Hsp_score>
      <Hsp_evalue>2.69918e-13</Hsp_evalue>
      <Hsp_query-from>118</Hsp_query-from>
      <Hsp_query-to>351</Hsp_query-to>
      <Hsp_hit-from>593</Hsp_hit-from>
      <Hsp_hit-to>671</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>79</Hsp_align-len>
      <Hsp_qseq>YQCPHCP-AFADPRALRAHDRVHTGERPYGCTVCRRTFTQRRALAVHRRTHTGERPHACGACGRSFAQRRSLVVHQKVH</Hsp_qseq>
      <Hsp_hseq>HECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTH</Hsp_hseq>
      <Hsp_midline>++CP+C   F+    L  H R H G +P+ C  C + FTQ   L  H R HTGE+P++C  C + F+++ +L  H   H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YDR216W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:895035:899006:1 gene:YDR216W transcript:YDR216W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADR1 description:Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization [Source:SGD;Acc:S000002624]</Hit_def>
  <Hit_accession>YDR216W</Hit_accession>
  <Hit_len>1323</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>64.3142</Hsp_bit-score>
      <Hsp_score>155</Hsp_score>
      <Hsp_evalue>7.59022e-12</Hsp_evalue>
      <Hsp_query-from>151</Hsp_query-from>
      <Hsp_query-to>351</Hsp_query-to>
      <Hsp_hit-from>87</Hsp_hit-from>
      <Hsp_hit-to>155</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>41</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>69</Hsp_align-len>
      <Hsp_qseq>PRALRAHDRVHTGE-RPYGCTVCRRTFTQRRALAVHRRTHTGERPHACGACGRSFAQRRSLVVH-QKVH</Hsp_qseq>
      <Hsp_hseq>PENLRLNGRTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIH</Hsp_hseq>
      <Hsp_midline>P  LR + R  +G+ R + C VC R F ++  L  H R+HT E+P+ CG C R F +R  L+ H QK+H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>47.3654</Hsp_bit-score>
      <Hsp_score>111</Hsp_score>
      <Hsp_evalue>1.95876e-06</Hsp_evalue>
      <Hsp_query-from>118</Hsp_query-from>
      <Hsp_query-to>273</Hsp_query-to>
      <Hsp_hit-from>104</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>YQCPHCP-AFADPRALRAHDRVHTGERPYGCTVCRRTFTQRRALAVH-RRTHTG</Hsp_qseq>
      <Hsp_hseq>FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>+ C  C  AFA    L+ H R HT E+PY C +C R FT+R  L  H ++ H+G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YNL027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:579580:581616:1 gene:YNL027W transcript:YNL027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRZ1 description:Transcription factor, activates transcription of stress response genes; nuclear localization is positively regulated by calcineurin-mediated dephosphorylation; rapidly localizes to the nucleus under blue light stress; can be activated in stochastic pulses of nuclear localization in response to calcium [Source:SGD;Acc:S000004972]</Hit_def>
  <Hit_accession>YNL027W</Hit_accession>
  <Hit_len>678</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>59.3066</Hsp_bit-score>
      <Hsp_score>142</Hsp_score>
      <Hsp_evalue>2.74211e-10</Hsp_evalue>
      <Hsp_query-from>94</Hsp_query-from>
      <Hsp_query-to>348</Hsp_query-to>
      <Hsp_hit-from>561</Hsp_hit-from>
      <Hsp_hit-to>655</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>45</Hsp_positive>
      <Hsp_gaps>10</Hsp_gaps>
      <Hsp_align-len>95</Hsp_align-len>
      <Hsp_qseq>RGRTEPLMYQCPHC-PAFADPRALRAHDRVHTGERPYGCTVCRRTFTQRRALAVHRRTHTGERPHACG---------ACGRSFAQRRSLVVHQKV</Hsp_qseq>
      <Hsp_hseq>NNRKNPANFACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKT</Hsp_hseq>
      <Hsp_midline>  R  P  + C  C   F  P  L++H R HT ERP+ C++C + F ++     H   HTG++ + CG          CG+ FA+  +L  H K </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>52.373</Hsp_bit-score>
      <Hsp_score>124</Hsp_score>
      <Hsp_evalue>4.49438e-08</Hsp_evalue>
      <Hsp_query-from>199</Hsp_query-from>
      <Hsp_query-to>351</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>619</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>30</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>51</Hsp_align-len>
      <Hsp_qseq>YGCTVCRRTFTQRRALAVHRRTHTGERPHACGACGRSFAQRRSLVVHQKVH</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLH</Hsp_hseq>
      <Hsp_midline>+ C VC + FT+   L  H RTHT ERP  C  CG++FA++     H+ +H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YML081W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:104777:108532:1 gene:YML081W transcript:YML081W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDA9 description:Transcription factor that regulates acetate production; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene; TDA9 has a paralog, RSF2, that arose from the whole genome duplication [Source:SGD;Acc:S000004546]</Hit_def>
  <Hit_accession>YML081W</Hit_accession>
  <Hit_len>1251</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>58.5362</Hsp_bit-score>
      <Hsp_score>140</Hsp_score>
      <Hsp_evalue>5.09307e-10</Hsp_evalue>
      <Hsp_query-from>193</Hsp_query-from>
      <Hsp_query-to>357</Hsp_query-to>
      <Hsp_hit-from>59</Hsp_hit-from>
      <Hsp_hit-to>114</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>56</Hsp_align-len>
      <Hsp_qseq>RPYGCTVCRRTFTQRRALAVHRRTHTGERPHACGACGRSFAQRRSLVVHQ-KVHGA</Hsp_qseq>
      <Hsp_hseq>RPFLCHICTRGFVRQEHLKRHQRAHTNEKPFLCVFCGRCFARRDLVLRHQHKLHSA</Hsp_hseq>
      <Hsp_midline>RP+ C +C R F ++  L  H+R HT E+P  C  CGR FA+R  ++ HQ K+H A</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YJR127C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:658917:663059:-1 gene:YJR127C transcript:YJR127C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSF2 description:Zinc-finger protein; involved in transcriptional control of both nuclear and mitochondrial genes, many of which specify products required for glycerol-based growth, respiration, and other functions; RSF2 has a paralog, TDA9, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000003888]</Hit_def>
  <Hit_accession>YJR127C</Hit_accession>
  <Hit_len>1380</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.4546</Hsp_bit-score>
      <Hsp_score>132</Hsp_score>
      <Hsp_evalue>5.4172e-09</Hsp_evalue>
      <Hsp_query-from>193</Hsp_query-from>
      <Hsp_query-to>357</Hsp_query-to>
      <Hsp_hit-from>149</Hsp_hit-from>
      <Hsp_hit-to>204</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>56</Hsp_align-len>
      <Hsp_qseq>RPYGCTVCRRTFTQRRALAVHRRTHTGERPHACGACGRSFAQRRSLVVH-QKVHGA</Hsp_qseq>
      <Hsp_hseq>RPFLCPTCTRGFVRQEHLKRHQHSHTREKPYLCIFCGRCFARRDLVLRHQQKLHAA</Hsp_hseq>
      <Hsp_midline>RP+ C  C R F ++  L  H+ +HT E+P+ C  CGR FA+R  ++ H QK+H A</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YPR186C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:909733:911022:-1 gene:YPR186C transcript:YPR186C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PZF1 description:Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA [Source:SGD;Acc:S000006390]</Hit_def>
  <Hit_accession>YPR186C</Hit_accession>
  <Hit_len>429</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>5.05853e-07</Hsp_evalue>
      <Hsp_query-from>139</Hsp_query-from>
      <Hsp_query-to>360</Hsp_query-to>
      <Hsp_hit-from>59</Hsp_hit-from>
      <Hsp_hit-to>133</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>75</Hsp_align-len>
      <Hsp_qseq>AFADPRALRAHD-RVHTGERPYGCTVCRRTFTQRRALAVHRRTHTGERPHACGACGRSFAQRRSLVVHQKVHGAT</Hsp_qseq>
      <Hsp_hseq>AFTRPSILTEHQLSVHQGLRAFQCDKCAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHTKS</Hsp_hseq>
      <Hsp_midline>AF  P  L  H   VH G R + C  C ++F ++  L  H  TH+  +P  C  CG+    R+ L  H+  H  +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YGL254W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:22304:23203:1 gene:YGL254W transcript:YGL254W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FZF1 description:Transcription factor involved in sulfite metabolism; sole identified regulatory target is SSU1; overexpression suppresses sulfite-sensitivity of many unrelated mutants due to hyperactivation of SSU1, contains five zinc fingers; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003223]</Hit_def>
  <Hit_accession>YGL254W</Hit_accession>
  <Hit_len>299</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>6.91134e-07</Hsp_evalue>
      <Hsp_query-from>97</Hsp_query-from>
      <Hsp_query-to>351</Hsp_query-to>
      <Hsp_hit-from>5</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>42</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>90</Hsp_align-len>
      <Hsp_qseq>GRTEPLMYQCPH--C-PAFADPRALRAHDRVHTGERPYGCTV--CRRTFTQRRALAVHRRTHTGERPHACGACGRSFAQRRSLVVHQKVH</Hsp_qseq>
      <Hsp_hseq>GRTKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>GRT+   Y+C    C   +  P  L+ H   HT ++PY C    C + F +   L VH+ TH+  +P AC  C + F   + L  H   H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YGL209W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:95858:97006:1 gene:YGL209W transcript:YGL209W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG2 description:Zinc finger transcriptional repressor; cooperates with Mig1p in glucose-induced gene repression; under low glucose conditions relocalizes to mitochondrion, where it interacts with Ups1p, antagonizes mitochondrial fission factor Dnm1p, indicative of a role in mitochondrial fusion or regulating morphology; regulates filamentous growth in response to glucose depletion; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000003177]</Hit_def>
  <Hit_accession>YGL209W</Hit_accession>
  <Hit_len>382</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>8.45874e-07</Hsp_evalue>
      <Hsp_query-from>178</Hsp_query-from>
      <Hsp_query-to>351</Hsp_query-to>
      <Hsp_hit-from>10</Hsp_hit-from>
      <Hsp_hit-to>69</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>60</Hsp_align-len>
      <Hsp_qseq>VHTGERPYGCTVCRRTFTQRRALAVHRRTHTGERPHACG--ACGRSFAQRRSLVVHQKVH</Hsp_qseq>
      <Hsp_hseq>VDNENRPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTH</Hsp_hseq>
      <Hsp_midline>V    RP+ C  C R F +      H RTHTGE+PH C    CG+SF++   L  H + H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YGL035C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:431548:433062:-1 gene:YGL035C transcript:YGL035C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG1 description:Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state [Source:SGD;Acc:S000003003]</Hit_def>
  <Hit_accession>YGL035C</Hit_accession>
  <Hit_len>504</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>1.42656e-06</Hsp_evalue>
      <Hsp_query-from>193</Hsp_query-from>
      <Hsp_query-to>351</Hsp_query-to>
      <Hsp_hit-from>36</Hsp_hit-from>
      <Hsp_hit-to>90</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>RPYGCTVCRRTFTQRRALAVHRRTHTGERPHACG--ACGRSFAQRRSLVVHQKVH</Hsp_qseq>
      <Hsp_hseq>RPHACPICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRIH</Hsp_hseq>
      <Hsp_midline>RP+ C +C R F +      H R HTGE+PHAC    C + F++   L  H+++H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YDR043C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:542674:543369:-1 gene:YDR043C transcript:YDR043C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRG1 description:Transcriptional repressor; recruits the Cyc8p-Tup1p complex to promoters; mediates glucose repression and negatively regulates a variety of processes including filamentous growth and alkaline pH response; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000002450]</Hit_def>
  <Hit_accession>YDR043C</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>45.8246</Hsp_bit-score>
      <Hsp_score>107</Hsp_score>
      <Hsp_evalue>2.79329e-06</Hsp_evalue>
      <Hsp_query-from>145</Hsp_query-from>
      <Hsp_query-to>351</Hsp_query-to>
      <Hsp_hit-from>156</Hsp_hit-from>
      <Hsp_hit-to>226</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>71</Hsp_align-len>
      <Hsp_qseq>ADPRALRAHDRVHTGERPYGCTVCRRTFTQRRALAVHRRTHTGERPHAC--GACGRSFAQRRSLVVHQKVH</Hsp_qseq>
      <Hsp_hseq>TDPRNTLSDEEDLEQRRKYICKICARGFTTSGHLARHNRIHTGEKNHCCPYKGCTQRFSRHDNCLQHYRTH</Hsp_hseq>
      <Hsp_midline> DPR   + +      R Y C +C R FT    LA H R HTGE+ H C    C + F++  + + H + H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YMR037C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:344403:346517:-1 gene:YMR037C transcript:YMR037C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN2 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; relative distribution to nucleus increases upon DNA replication stress [Source:SGD;Acc:S000004640]</Hit_def>
  <Hit_accession>YMR037C</Hit_accession>
  <Hit_len>704</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.595</Hsp_bit-score>
      <Hsp_score>109</Hsp_score>
      <Hsp_evalue>2.9358e-06</Hsp_evalue>
      <Hsp_query-from>190</Hsp_query-from>
      <Hsp_query-to>351</Hsp_query-to>
      <Hsp_hit-from>644</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>ERPYGCTVCRRTFTQRRALAVH-RRTHTGERPHACGACGRSFAQRRSLVVHQKVH</Hsp_qseq>
      <Hsp_hseq>EKPFHCHICPKSFKRSEHLKRHVRSVHSNERPFACHICDKKFSRSDNLSQHIKTH</Hsp_hseq>
      <Hsp_midline>E+P+ C +C ++F +   L  H R  H+ ERP AC  C + F++  +L  H K H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YDR146C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:748613:750742:-1 gene:YDR146C transcript:YDR146C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWI5 description:Transcription factor that recruits Mediator and Swi/Snf complexes; activates transcription of genes expressed at the M/G1 phase boundary and in G1 phase; required for expression of the HO gene controlling mating type switching; localization to nucleus occurs during G1 and appears to be regulated by phosphorylation by Cdc28p kinase; SWI5 has a paralog, ACE2, that arose from the whole genome duplication [Source:SGD;Acc:S000002553]</Hit_def>
  <Hit_accession>YDR146C</Hit_accession>
  <Hit_len>709</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>45.8246</Hsp_bit-score>
      <Hsp_score>107</Hsp_score>
      <Hsp_evalue>6.06639e-06</Hsp_evalue>
      <Hsp_query-from>160</Hsp_query-from>
      <Hsp_query-to>339</Hsp_query-to>
      <Hsp_hit-from>567</Hsp_hit-from>
      <Hsp_hit-to>626</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>62</Hsp_align-len>
      <Hsp_qseq>LRAHDRVHTGERPYGCT--VCRRTFTQRRALAVHRRTHTGERPHACGACGRSFAQRRSLVVH</Hsp_qseq>
      <Hsp_hseq>IRSHIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSHQ-EKAYAC-PCGKKFNREDALVVH</Hsp_hseq>
      <Hsp_midline>+R+H + H  +RPY C    C + F +   L  H+++H  E+ +AC  CG+ F +  +LVVH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YER028C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:210692:211876:-1 gene:YER028C transcript:YER028C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG3 description:Transcriptional regulator; partially nonfunctional in S288C strains but has a major role in catabolite repression and ethanol response in some other strains; involved in response to toxic agents; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p, allowing induction of damage response genesenvironment [Source:SGD;Acc:S000000830]</Hit_def>
  <Hit_accession>YER028C</Hit_accession>
  <Hit_len>394</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>45.0542</Hsp_bit-score>
      <Hsp_score>105</Hsp_score>
      <Hsp_evalue>8.26242e-06</Hsp_evalue>
      <Hsp_query-from>190</Hsp_query-from>
      <Hsp_query-to>351</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>69</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>56</Hsp_align-len>
      <Hsp_qseq>ERPYGCTVCRRTFTQRRALAVHRRTHTGERPHACGA--CGRSFAQRRSLVVHQKVH</Hsp_qseq>
      <Hsp_hseq>QRPFRCEICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTH</Hsp_hseq>
      <Hsp_midline>+RP+ C +C R F +      H RTHTGE+PH C    C +SF++   L  H + H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>90</Statistics_hsp-len>
      <Statistics_eff-space>535935477</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>

