<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
  <BlastOutput_program>blastx</BlastOutput_program>
  <BlastOutput_version>BLASTX 2.10.0+</BlastOutput_version>
  <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
  <BlastOutput_db>/home/smr/dbs/ensembl/release-100/Saccharomyces_cerevisiae.R64-1-1.pep.all.fa</BlastOutput_db>
  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
  <BlastOutput_query-def>PMZ_0061504-RA transcript Note:&quot;Similar to Fbn2 Fibrillin-2 (Mus musculus)&quot; offset:0 AED:0.27 eAED:0.31 QI:0|0|0|0.77|0.87|0.88|9|0|567</BlastOutput_query-def>
  <BlastOutput_query-len>1704</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_matrix>BLOSUM62</Parameters_matrix>
      <Parameters_expect>1e-05</Parameters_expect>
      <Parameters_gap-open>11</Parameters_gap-open>
      <Parameters_gap-extend>1</Parameters_gap-extend>
      <Parameters_filter>L;</Parameters_filter>
    </Parameters>
  </BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
  <Iteration_iter-num>1</Iteration_iter-num>
  <Iteration_query-ID>Query_1</Iteration_query-ID>
  <Iteration_query-def>PMZ_0061504-RA transcript Note:&quot;Similar to Fbn2 Fibrillin-2 (Mus musculus)&quot; offset:0 AED:0.27 eAED:0.31 QI:0|0|0|0.77|0.87|0.88|9|0|567</Iteration_query-def>
  <Iteration_query-len>1704</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>95</Statistics_hsp-len>
      <Statistics_eff-space>1081782691</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>2</Iteration_iter-num>
  <Iteration_query-ID>Query_2</Iteration_query-ID>
  <Iteration_query-def>PMZ_0038966-RA transcript Note:&quot;Similar to Fbn2 Fibrillin-2 (Mus musculus)&quot; offset:0 AED:0.13 eAED:0.14 QI:0|0|0|1|1|0|2|1|62</Iteration_query-def>
  <Iteration_query-len>187</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>35</Statistics_hsp-len>
      <Statistics_eff-space>72442809</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>3</Iteration_iter-num>
  <Iteration_query-ID>Query_3</Iteration_query-ID>
  <Iteration_query-def>PMZ_0047635-RA transcript Note:&quot;Similar to Fbn1 Fibrillin-1 (Mus musculus)&quot; offset:20 AED:1.00 eAED:1.00 QI:20|0|0|0|0|0|2|57|72</Iteration_query-def>
  <Iteration_query-len>296</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>69</Statistics_hsp-len>
      <Statistics_eff-space>71301343</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>4</Iteration_iter-num>
  <Iteration_query-ID>Query_4</Iteration_query-ID>
  <Iteration_query-def>PMZ_0038489-RA transcript Note:&quot;Similar to FBN1 Fibrillin-1 (Homo sapiens)&quot; offset:1 AED:1.00 eAED:1.00 QI:1|0|0|0|1|1|2|0|142</Iteration_query-def>
  <Iteration_query-len>427</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>81</Statistics_hsp-len>
      <Statistics_eff-space>145147487</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>5</Iteration_iter-num>
  <Iteration_query-ID>Query_5</Iteration_query-ID>
  <Iteration_query-def>PMZ_0047371-RA transcript Note:&quot;Similar to Fbn2 Fibrillin-2 (Mus musculus)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0.33|0.5|4|0|116</Iteration_query-def>
  <Iteration_query-len>348</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>77</Statistics_hsp-len>
      <Statistics_eff-space>93828813</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>6</Iteration_iter-num>
  <Iteration_query-ID>Query_6</Iteration_query-ID>
  <Iteration_query-def>PMZ_0048221-RA transcript Note:&quot;Similar to Fgf10 Fibroblast growth factor 10 (Rattus norvegicus)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0|0|2|0|86</Iteration_query-def>
  <Iteration_query-len>258</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>57</Statistics_hsp-len>
      <Statistics_eff-space>73598143</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>7</Iteration_iter-num>
  <Iteration_query-ID>Query_7</Iteration_query-ID>
  <Iteration_query-def>PMZ_0061508-RA transcript Note:&quot;Similar to Fgf10 Fibroblast growth factor 10 (Mus musculus)&quot; offset:0 AED:0.08 eAED:0.28 QI:0|0|0|1|1|1|2|0|146</Iteration_query-def>
  <Iteration_query-len>441</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>81</Statistics_hsp-len>
      <Statistics_eff-space>157044822</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>8</Iteration_iter-num>
  <Iteration_query-ID>Query_8</Iteration_query-ID>
  <Iteration_query-def>PMZ_0061505-RA transcript Note:&quot;Similar to Khdc4 KH homology domain-containing protein 4 (Mus musculus)&quot; offset:0 AED:0.15 eAED:0.29 QI:0|0.4|0.66|1|0.6|0.66|6|977|350</Iteration_query-def>
  <Iteration_query-len>2030</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1322670860</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>9</Iteration_iter-num>
  <Iteration_query-ID>Query_9</Iteration_query-ID>
  <Iteration_query-def>PMZ_0061506-RA transcript Note:&quot;Protein of unknown function&quot; offset:41 AED:0.48 eAED:0.48 QI:41|0.33|0.5|0.75|0|0|4|0|94</Iteration_query-def>
  <Iteration_query-len>326</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>76</Statistics_hsp-len>
      <Statistics_eff-space>77198944</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>10</Iteration_iter-num>
  <Iteration_query-ID>Query_10</Iteration_query-ID>
  <Iteration_query-def>PMZ_0061507-RA transcript Note:&quot;Similar to ETFA Electron transfer flavoprotein subunit alpha, mitochondrial (Homo sapiens)&quot; offset:313 AED:0.21 eAED:0.21 QI:313|0.62|0.77|1|0.75|0.66|9|1094|240</Iteration_query-def>
  <Iteration_query-len>2130</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YPR004C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:564007:565041:-1 gene:YPR004C transcript:YPR004C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AIM45 description:Putative ortholog of mammalian ETF-alpha; interacts with frataxin, Yfh1p; null mutant displays elevated frequency of mitochondrial genome loss; may have a role in oxidative stress response; ETF-alpha is an electron transfer flavoprotein complex subunit [Source:SGD;Acc:S000006208]</Hit_def>
  <Hit_accession>YPR004C</Hit_accession>
  <Hit_len>344</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>116.316</Hsp_bit-score>
      <Hsp_score>290</Hsp_score>
      <Hsp_evalue>8.93498e-29</Hsp_evalue>
      <Hsp_query-from>710</Hsp_query-from>
      <Hsp_query-to>1003</Hsp_query-to>
      <Hsp_hit-from>208</Hsp_hit-from>
      <Hsp_hit-to>306</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>66</Hsp_identity>
      <Hsp_positive>83</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>99</Hsp_align-len>
      <Hsp_qseq>WLEQSLTKSDRPELTSAKVVISGGRGLKNGENF-KLLYDLADKLHXXXXXXXXXXXXXFVPNDMQVGQTGKMVAPELYIAVGISGAIQHLAGMKDSKVV</Hsp_qseq>
      <Hsp_hseq>WVKTILTKSERPELTSAQNVVTGGRALKDKETFEKLLSPLADVLHAAIGATRASVDNGLCDNSLQIGQTGKVVAPNLYIAIGVSGAVQHLAGMKDSKVI</Hsp_hseq>
      <Hsp_midline>W++  LTKS+RPELTSA+ V++GGR LK+ E F KLL  LAD LHAA+GA+RA+VD G   N +Q+GQTGK+VAP LYIA+G+SGA+QHLAGMKDSKV+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>97</Statistics_hsp-len>
      <Statistics_eff-space>1393880471</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>11</Iteration_iter-num>
  <Iteration_query-ID>Query_11</Iteration_query-ID>
  <Iteration_query-def>PMZ_0061510-RA transcript Note:&quot;Similar to HCN4 Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 4 (Homo sapiens)&quot; offset:0 AED:0.39 eAED:0.39 QI:0|0|0|1|0.83|0.71|7|0|853</Iteration_query-def>
  <Iteration_query-len>2562</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>98</Statistics_hsp-len>
      <Statistics_eff-space>1714053852</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>12</Iteration_iter-num>
  <Iteration_query-ID>Query_12</Iteration_query-ID>
  <Iteration_query-def>PMZ_0061512-RA transcript Note:&quot;Similar to Fah Fumarylacetoacetase (Rattus norvegicus)&quot; offset:105 AED:0.43 eAED:0.43 QI:105|0.12|0.33|0.88|0.62|0.66|9|591|438</Iteration_query-def>
  <Iteration_query-len>2013</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1311268525</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>13</Iteration_iter-num>
  <Iteration_query-ID>Query_13</Iteration_query-ID>
  <Iteration_query-def>PMZ_0035943-RA transcript Note:&quot;Similar to NARS Asparagine--tRNA ligase, cytoplasmic (Bos taurus)&quot; offset:859 AED:0.38 eAED:0.38 QI:859|0.3|0.45|1|0|0.18|11|0|176</Iteration_query-def>
  <Iteration_query-len>1390</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YHR019C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VIII:141894:143558:-1 gene:YHR019C transcript:YHR019C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DED81 description:Cytosolic asparaginyl-tRNA synthetase; required for protein synthesis, catalyzes the specific attachment of asparagine to its cognate tRNA [Source:SGD;Acc:S000001061]</Hit_def>
  <Hit_accession>YHR019C</Hit_accession>
  <Hit_len>554</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>164.081</Hsp_bit-score>
      <Hsp_score>414</Hsp_score>
      <Hsp_evalue>2.4974e-45</Hsp_evalue>
      <Hsp_query-from>740</Hsp_query-from>
      <Hsp_query-to>1306</Hsp_query-to>
      <Hsp_hit-from>198</Hsp_hit-from>
      <Hsp_hit-to>467</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>109</Hsp_identity>
      <Hsp_positive>143</Hsp_positive>
      <Hsp_gaps>83</Hsp_gaps>
      <Hsp_align-len>271</Hsp_align-len>
      <Hsp_qseq>PGGHELICDFWELVGAAPAGGADNLLN---EESSVEVQLDHRHMLLRGETXXXXXXXXXXXXQCFRDHY------------FSRGYHEGGSTLFRLDYFGEEAFLTQSSQLYLET----------------------------YTHVEAECPFITFEELLQRVEDLVCDVVERALSSPLAGQLL-EVNP--------------------------------------DIPEAPERLMTDAIGEPILLCRFPAEIKSFYMQRCADDPRLTES</Hsp_qseq>
      <Hsp_hseq>PGGVELNVDYYEVVGLAP-GGEDSFTNKIAEGSDPSLLLDQRHLALRGDALSAVMKVRAALLKSVRRVYDEEHLTEVTPPCMVQTQVEGGSTLFKMNYYGEEAYLTQSSQLYLETCLASLGDVYTIQESFRAEKSHTRRHLSEYTHIEAELAFLTFDDLLQHIETLIVKSVQYVLEDPIAGPLVKQLNPNFKAPKAPFMRLQYKDAITWLNEHDIKNEEGEDFKFGDDIAEAAERKMTDTIGVPIFLTRFPVEIKSFYMKRCSDDPRVTES</Hsp_hseq>
      <Hsp_midline>PGG EL  D++E+VG AP GG D+  N   E S   + LD RH+ LRG+ L+ V++VR+A+++  R  Y              +   EGGSTLF+++Y+GEEA+LTQSSQLYLET                            YTH+EAE  F+TF++LLQ +E L+   V+  L  P+AG L+ ++NP                                      DI EA ER MTD IG PI L RFP EIKSFYM+RC+DDPR+TES</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>2.5656e-06</Hsp_evalue>
      <Hsp_query-from>34</Hsp_query-from>
      <Hsp_query-to>531</Hsp_query-to>
      <Hsp_hit-from>44</Hsp_hit-from>
      <Hsp_hit-to>196</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>46</Hsp_identity>
      <Hsp_positive>78</Hsp_positive>
      <Hsp_gaps>27</Hsp_gaps>
      <Hsp_align-len>173</Hsp_align-len>
      <Hsp_qseq>PSLYVDAKAQGERWEPISKTQLKGVKKAW---QREQTKQXXXXXXXXXXXVRREKNLEEAKKISIALDPSLPAPLQLKVVELAAHRGSRVKVFGWVHRLRRQGEASPRRADVDVCGAA*WHRLPAVRHEREAGEFTSLLVCQCYA----AVLLATESSVAVYGTVKPVPDGKA</Hsp_qseq>
      <Hsp_hseq>PKLFV-FKTEDNEYQEISASALKKARKGCDGLKKKAVKQKEQELKKQQKEAENAAKQLSALNITIKEDESLPAAIKTRIYDSYSKVGQRVKVSGWIHRLR-----SNKKVIFVVL--------------RDGSGFIQCVLSGDLALAQQTLDLTLESTVTLYGTIVKLPEGKT</Hsp_hseq>
      <Hsp_midline>P L+V  K +   ++ IS + LK  +K     +++  KQ  ++ K+ +           A  I+I  D SLPA ++ ++ +  +  G RVKV GW+HRLR     S ++    V               R+   F   ++    A     + L  ES+V +YGT+  +P+GK </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>93</Statistics_hsp-len>
      <Statistics_eff-space>851098790</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>14</Iteration_iter-num>
  <Iteration_query-ID>Query_14</Iteration_query-ID>
  <Iteration_query-def>PMZ_0061513-RA transcript Note:&quot;Similar to GTF2A2 Transcription initiation factor IIA subunit 2 (Homo sapiens)&quot; offset:16 AED:0.01 eAED:0.01 QI:16|1|1|1|0|0|3|1453|82</Iteration_query-def>
  <Iteration_query-len>1718</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YKL058W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:330166:330534:1 gene:YKL058W transcript:YKL058W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOA2 description:TFIIA small subunit; involved in transcriptional activation, acts as antirepressor or as coactivator; required, along with Toa1p, for ribosomal protein gene transcription in vivo; homologous to smallest subunit of human and Drosophila TFIIA; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000001541]</Hit_def>
  <Hit_accession>YKL058W</Hit_accession>
  <Hit_len>122</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>59.3066</Hsp_bit-score>
      <Hsp_score>142</Hsp_score>
      <Hsp_evalue>2.37429e-11</Hsp_evalue>
      <Hsp_query-from>2</Hsp_query-from>
      <Hsp_query-to>232</Hsp_query-to>
      <Hsp_hit-from>27</Hsp_hit-from>
      <Hsp_hit-to>117</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>53</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>91</Hsp_align-len>
      <Hsp_qseq>LQSQQMSPQLALQVLLQFDKAINAALAQRVRNRISFRGSLNTYRFCDNVWTFVLNDVEF------REVT--------DLVKVDKVKIVACD</Hsp_qseq>
      <Hsp_hseq>ISDGRIEASLAMRVLETFDKVVAETLKDNTQSKLTVKGNLDTYGFCDDVWTFIVKNCQVTVEDSHRDASQNGSGDSQSVISVDKLRIVACN</Hsp_hseq>
      <Hsp_midline>+   ++   LA++VL  FDK +   L    +++++ +G+L+TY FCD+VWTF++ + +       R+ +         ++ VDK++IVAC+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>95</Statistics_hsp-len>
      <Statistics_eff-space>1090930959</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>15</Iteration_iter-num>
  <Iteration_query-ID>Query_15</Iteration_query-ID>
  <Iteration_query-def>PMZ_0061514-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.21 eAED:1.00 QI:0|0|0|1|1|1|2|0|269</Iteration_query-def>
  <Iteration_query-len>810</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>88</Statistics_hsp-len>
      <Statistics_eff-space>424654594</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>16</Iteration_iter-num>
  <Iteration_query-ID>Query_16</Iteration_query-ID>
  <Iteration_query-def>PMZ_0061515-RA transcript Note:&quot;Similar to S-antigen protein (Plasmodium falciparum (isolate Wellcome))&quot; offset:0 AED:0.46 eAED:0.67 QI:0|0|0|0.5|1|1|2|0|1101</Iteration_query-def>
  <Iteration_query-len>3306</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YMR173W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:608689:609981:1 gene:YMR173W transcript:YMR173W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DDR48 description:DNA damage-responsive protein; expression is increased in response to heat-shock stress or treatments that produce DNA lesions; contains multiple repeats of the amino acid sequence NNNDSYGS; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000004784]</Hit_def>
  <Hit_accession>YMR173W</Hit_accession>
  <Hit_len>430</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>104.375</Hsp_bit-score>
      <Hsp_score>259</Hsp_score>
      <Hsp_evalue>5.87054e-24</Hsp_evalue>
      <Hsp_query-from>1300</Hsp_query-from>
      <Hsp_query-to>2220</Hsp_query-to>
      <Hsp_hit-from>80</Hsp_hit-from>
      <Hsp_hit-to>391</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>66</Hsp_identity>
      <Hsp_positive>149</Hsp_positive>
      <Hsp_gaps>33</Hsp_gaps>
      <Hsp_align-len>326</Hsp_align-len>
      <Hsp_qseq>LGTNQMGDLGINQMGVLGTNQMGALGTNQMGALGTNQMRALGTN--QMGALGTNQMGALG-TNQMGALGTNQMGALGTNQMGALGTNQMGALGTNQMG--ALGTNQMGPLGTNQMGTLGTN--QMGALGTNQMGALGTNQMGALGTNQMGSLGTNQMGDLGTNQMGDLGTNQMGDLGTNQKGALGTNQMGALG-TNQMGALGTNQMGALGT---NQMGALGTNQMGALG-TNQMGALGTN--QMGALGTNQMGALGTNQMGSLGTN--QMGALGTNQMGALGTNQMGALGTN--QMGALGTNQMGALG-TNQMGALGTNQMGALGT</Hsp_qseq>
      <Hsp_hseq>YGSNNNDSYGSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKNKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSNNNDSYGSNNDDSYGS-------SNK-------KKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGSSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNKKKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGS</Hsp_hseq>
      <Hsp_midline> G+N     G N     G+N   + G+N   + G+N   + G++  +  + G+N   + G +N   + G+N   + G+N   + G+N   + G++     + G+N     G+N   + G++  +  + G++   + G+N   + G+N   S G+N     G+       +N+       +K + G+N   + G +N   + G+N   + G+   N+     ++   + G +N   + G++  +  + G+N   + G+N   S G++  +  + G++   + G+N   + G++  +  + G+N   + G +N   + G+N   + G+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>101.293</Hsp_bit-score>
      <Hsp_score>251</Hsp_score>
      <Hsp_evalue>6.04864e-23</Hsp_evalue>
      <Hsp_query-from>1084</Hsp_query-from>
      <Hsp_query-to>2052</Hsp_query-to>
      <Hsp_hit-from>80</Hsp_hit-from>
      <Hsp_hit-to>391</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>67</Hsp_identity>
      <Hsp_positive>150</Hsp_positive>
      <Hsp_gaps>39</Hsp_gaps>
      <Hsp_align-len>337</Hsp_align-len>
      <Hsp_qseq>LGTNQMGTLGTNQMGPLGTNQMGPLGTNQMGALGTNQMGALGTNQMGALVTNQMGALGTNQMGDLGTNQMGDLGTNQMGDLGINQMGVLGTNQMGALGTNQMGALG-TNQMR-ALGTNQMGALGTNQMGALGTN--QMGALGTNQMGALGTNQMGALGTNQMGALGTNQMGALGTNQMGPLGTNQMGTLGTNQMGALG-TNQMGALGTNQMGALGTNQMG--SLGTNQMGD-LGTNQMGD-LGTNQMGDLGTNQKGALGTNQMGALGTNQMGALGTN--QMGALGTNQMGALGTNQMGALGTN--QMGALGTNQMGALG-TNQMGALGTNQMGSLGT</Hsp_qseq>
      <Hsp_hseq>YGSNNNDSYGSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNK------KKSSYGSNNDDSYGSSNNNDS-------YGSNNNDSYGSNNNDSYGSNNDDSYGSSNKNKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSNNNDSYGSNNDDSYGSSNK------KKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGSSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNK------KKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGS</Hsp_hseq>
      <Hsp_midline> G+N   + G+N     G+N     G+N   + G+N   + G++        +  + G+N     G++   D         G N     G+N   + G+N   + G +N+ + + G+N   + G+N   + G++  +  + G++   + G+N   + G+N   + G+N   + G++        +  + G+N   + G +N   + G+N   + G++     S G++   D  G++   D  G++        +K + G+N   + G+N   + G++  +  + G++   + G+N   + G++  +  + G+N   + G +N   + G+N   S G+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>92.0485</Hsp_bit-score>
      <Hsp_score>227</Hsp_score>
      <Hsp_evalue>5.34714e-20</Hsp_evalue>
      <Hsp_query-from>325</Hsp_query-from>
      <Hsp_query-to>1212</Hsp_query-to>
      <Hsp_hit-from>80</Hsp_hit-from>
      <Hsp_hit-to>391</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>51</Hsp_identity>
      <Hsp_positive>126</Hsp_positive>
      <Hsp_gaps>22</Hsp_gaps>
      <Hsp_align-len>315</Hsp_align-len>
      <Hsp_qseq>VGTNRMGPLKTNRMGAVGTNRMGAVGTNRMGAVGTNRMGAVGT--KRMGAVGTKQTGAVG-TKQTGAVGTKQTGAVGTKQAGAMGTKQTGAMGT--KQAGAMGTKQTGAMGTKQTGAMGT--KQTGAMGTKQTGAMGTKQTGAMGTKQAGAMGTKQTGAMGT--KQAGAMGTKQTGAMG-TKQTGAMGTKQTGAMGT--KQTGAMGTKQT----GAMGTKQAGAMGTKQTGAMGTKQTGAMGTKQTGAMGTKQTGMKQMGPLGTNQMGTLGTNQMGTLGTN--QMGPLGTNQMGPLG-TNQMGALGTNQMGALGT</Hsp_qseq>
      <Hsp_hseq>YGSNNNDSYGSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKNKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSNNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGSSNKNKSSYGSSSNDDSYGSSNNDDSYGSSNKKKSSYGSNNDDSYGSNNDDSYGSSN---KKKSSYGSSNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNDDSYGS</Hsp_hseq>
      <Hsp_midline> G+N      +N   + G+N   + G+N   + G+N   + G+  K+  + G+    + G +    + G+    + G+    + G+    + G+  K   + G+    + G+    + G+  K+  + G+    + G+    + G+    + G+    + G+  K+  + G+    + G +    + G+    + G+  K   + G+       G+     +     K+  + G+    + G+    + G+     K+    G++   + G+N   + G++  +    G+N     G +N   + G+N   + G+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>73.559</Hsp_bit-score>
      <Hsp_score>179</Hsp_score>
      <Hsp_evalue>4.89059e-14</Hsp_evalue>
      <Hsp_query-from>1804</Hsp_query-from>
      <Hsp_query-to>2226</Hsp_query-to>
      <Hsp_hit-from>80</Hsp_hit-from>
      <Hsp_hit-to>235</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>73</Hsp_positive>
      <Hsp_gaps>15</Hsp_gaps>
      <Hsp_align-len>156</Hsp_align-len>
      <Hsp_qseq>LGTNQKGALGTNQMGALGTNQMGALGTNQMGALGTNQMGALGTN--QMGALGTNQMGALG-TNQMGALGTNQMGALGTNQMGSLGTNQMGALGTNQMG--ALGTNQMGALGTN----------QMGALGTNQMGALGTNQMGALGTNQMGALGTNQ</Hsp_qseq>
      <Hsp_hseq>YGSNNNDSYGSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKKKSSYGSNNDDSYGSSNNNDSYGSNNNDSYGSNNNDSYGSNNDDSYGSSNKNKSSYGSNNDDSYGSNNDDSYGSSNKKKSSYGSSNNDSYGSNNDDSYGSNNNDSYGSNN</Hsp_hseq>
      <Hsp_midline> G+N   + G+N   + G+N   + G+N   + G+N   + G++  +  + G+N   + G +N   + G+N   + G+N   S G+N   + G++     + G+N   + G+N          +  + G++   + G+N   + G+N   + G+N </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>100</Statistics_hsp-len>
      <Statistics_eff-space>2258575134</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>17</Iteration_iter-num>
  <Iteration_query-ID>Query_17</Iteration_query-ID>
  <Iteration_query-def>PMZ_0045896-RA transcript Note:&quot;Protein of unknown function&quot; offset:2 AED:1.00 eAED:1.00 QI:2|0|0|0|0.16|0.28|7|445|271</Iteration_query-def>
  <Iteration_query-len>1263</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>92</Statistics_hsp-len>
      <Statistics_eff-space>758959243</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>18</Iteration_iter-num>
  <Iteration_query-ID>Query_18</Iteration_query-ID>
  <Iteration_query-def>PMZ_0061517-RA transcript Note:&quot;Protein of unknown function&quot; offset:70 AED:0.40 eAED:0.40 QI:70|0.75|0.66|1|1|0.88|9|0|155</Iteration_query-def>
  <Iteration_query-len>538</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>84</Statistics_hsp-len>
      <Statistics_eff-space>224168365</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>19</Iteration_iter-num>
  <Iteration_query-ID>Query_19</Iteration_query-ID>
  <Iteration_query-def>PMZ_0020575-RA transcript Note:&quot;Similar to Chd2 Chromodomain-helicase-DNA-binding protein 2 (Mus musculus)&quot; offset:0 AED:0.26 eAED:0.27 QI:0|0.4|0.52|1|0.4|0.61|21|0|1007</Iteration_query-def>
  <Iteration_query-len>3024</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YER164W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:505392:509798:1 gene:YER164W transcript:YER164W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHD1 description:Chromatin remodeler that regulates various aspects of transcription; acts in in conjunction with Isw1b to regulate chromatin structure and maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes [Source:SGD;Acc:S000000966]</Hit_def>
  <Hit_accession>YER164W</Hit_accession>
  <Hit_len>1468</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>439.499</Hsp_bit-score>
      <Hsp_score>1129</Hsp_score>
      <Hsp_evalue>1.06362e-134</Hsp_evalue>
      <Hsp_query-from>208</Hsp_query-from>
      <Hsp_query-to>1884</Hsp_query-to>
      <Hsp_hit-from>212</Hsp_hit-from>
      <Hsp_hit-to>869</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>270</Hsp_identity>
      <Hsp_positive>374</Hsp_positive>
      <Hsp_gaps>149</Hsp_gaps>
      <Hsp_align-len>683</Hsp_align-len>
      <Hsp_qseq>QYLIKWKGWSHIHNTWESEDTLRQQKVRGIKKVENFQKK---EEEIAQWLSMASPEDAEYYSCQREMSADLYKQYCVVERVIAMKTSKSAPSHTDSLSHVGHKSTSGHPDYLCKWQGLPYAECSWEDGALISRKFQHCIDGYMANLRSKTLPTKECKALKQRPRFVALKDQPPFVGGVDSLELRDYQLDGLNWLAHSWCKGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRNVIREYEWIH----QQTKKLKFNALTV-----------LGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMP--------------DNGSDNGYVSLHKELEPFLLRRVKKDVERSLPA-----------------------------------------------KKCCNHCYLIKLPE--------DENVDKHDALQSLVRSSGXXXXXXXXXXXXXETGHRVLIFSQMVRMLDILADYLAMKHFPFQ------------------------DFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK-------------QEDIIERAKKKMVLDHLVIQRMDTTGKTVLQKGSAPSSSTPFNKEELASIL</Hsp_qseq>
      <Hsp_hseq>EFLIKWTDESHLHNTWETYESIGQ--VRGLKRLDNYCKQFIIEDQQVRLDPYVTAEDIEIMDMERERRLDEFEEFHVPERIIDSQRA----SLEDGTSQL---------QYLVKWRRLNYDEATWENATDIVKLAPEQVKHFQNRENSKILPQYSSNYTSQRPRFEKLSVQPPFIKGG---ELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQNGPHIIVVPLSTMPAWLDTFEKWAPDLNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEIDFENQDEEQEEYIHDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELSDVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIISLGVTDGNKYTKKNEP-------NAGELSAIL</Hsp_hseq>
      <Hsp_midline>++LIKW   SH+HNTWE+ +++ Q  VRG+K+++N+ K+   E++  +     + ED E    +RE   D ++++ V ER+I  + +    S  D  S +          YL KW+ L Y E +WE+   I +     +  +     SK LP        QRPRF  L  QPPF+ G    ELRD+QL G+NW+A  W KG++ ILADEMGLGKT+QT++F+S++  + +  GP ++VVPLST+ +W   F  WAP++N + Y+G+  SR+ IREYE+      +  K +KFN L             LG++ W F+ VDEAHRLKN +S LY+SL  FK   R+LITGTPLQN++KEL +L++F+MP              D   +     LH+ ++PF+LRR+KKDVE+SLP+                                               KK  NH YL    E        D  + + + L+ L+ SSGK++LLD+LL RL++ GHRVLIFSQMVRMLDIL DYL++K   FQ                        DF FLLSTRAGGLGINL +ADTVVIFDSDWNPQ DLQA ARAHRIGQK              +E+++ERA+KKM+L++ +I    T G    +K          N  EL++IL</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YOR304W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:884514:887876:1 gene:YOR304W transcript:YOR304W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ISW2 description:ATP-dependent DNA translocase involved in chromatin remodeling; ATPase component that, with Itc1p, forms a complex required for repression of a-specific genes, INO1, and early meiotic genes during mitotic growth; the Isw2 complex exhibits basal levels of chromatin binding throughout the genome as well as target-specific chromatin interactions; targeted by Ume6p- and Sua7p-dependent DNA looping to many loci genome-wide [Source:SGD;Acc:S000005831]</Hit_def>
  <Hit_accession>YOR304W</Hit_accession>
  <Hit_len>1120</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>305.449</Hsp_bit-score>
      <Hsp_score>781</Hsp_score>
      <Hsp_evalue>2.04594e-88</Hsp_evalue>
      <Hsp_query-from>574</Hsp_query-from>
      <Hsp_query-to>1836</Hsp_query-to>
      <Hsp_hit-from>150</Hsp_hit-from>
      <Hsp_hit-to>653</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>215</Hsp_identity>
      <Hsp_positive>278</Hsp_positive>
      <Hsp_gaps>159</Hsp_gaps>
      <Hsp_align-len>542</Hsp_align-len>
      <Hsp_qseq>EDGALISRKFQHCIDGYMANLRSKTLPTKECKALKQRPRFVALKDQPPFVGGVDSLELRDYQLDGLNWLAHSWCKGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSS-----RNVIRE---------YEWIHQQTKKLKFNALTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPDNGSDNGYVS------------------LHKELEPFLLRRVKKDVERSLPAK-------------------------------------------------KCCNHCYLIKLPE---DENVDKHDALQSLVRSSGXXXXXXXXXXXXXETGHRVLIFSQMVRMLDILADYLAMKHFPF------------------------QDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ-------------EDIIERAKKKMVLDHLVIQRMDTTGKTVLQKGSA</Hsp_qseq>
      <Hsp_hseq>EDAELMADEEEEIVDTYQEDI------------------FVS--ESPSFVK---SGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEGPFLIIVPKSTLDNWRREFLKWTPNVNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIREK-----NALKRLA---WQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWFEQNNSEQDQEIVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAVNGAVGKREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEH-----LIFNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQ--GTGKKTASLGNS</Hsp_hseq>
      <Hsp_midline>ED  L++ + +  +D Y  ++                  FV+  + P FV    S +LRDYQ+ GLNWL        S ILADEMGLGKT+QTISFL Y+ +  Q+ GPFL++VP ST+ +W+REF  W P +NV+V  GD  +     RN+I E         YE + ++      NAL  L    W ++ +DEAHR+KN+ S L + +  F +  RLLITGTPLQN+L ELW+LL+F++PD   D+                      LH  L PFLLRRVK DVE+SL  K                                                 KCCNH YL +  E       D+H     L+ +SGK+I+LDKLL RL+E G RVLIFSQM R+LDIL DY   + F +                        + F FLL+TRAGGLGINL +ADTV++FDSDWNPQ DLQA  RAHRIGQKKQ             E +IERA +K+ LD LVIQ+   TGK     G++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YBR245C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:708150:711539:-1 gene:YBR245C transcript:YBR245C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ISW1 description:ATPase subunit of imitation-switch (ISWI) class chromatin remodelers; with Ioc3p forms Isw1a complex involved in repression of transcription initiation; with Ioc2p and Ioc4p forms Isw1b complex involved in regulation of transcription elongation; Isw1b recruited to ORFs by H3K36 methylation and acts with Chd1p to prevent trans-histone exchange over coding regions; Isw1p import into nucleus depends on C-terminal bipartite nuclear targeting signal KRIR X19 KKAK [Source:SGD;Acc:S000000449]</Hit_def>
  <Hit_accession>YBR245C</Hit_accession>
  <Hit_len>1129</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>295.434</Hsp_bit-score>
      <Hsp_score>755</Hsp_score>
      <Hsp_evalue>8.80373e-85</Hsp_evalue>
      <Hsp_query-from>700</Hsp_query-from>
      <Hsp_query-to>1836</Hsp_query-to>
      <Hsp_hit-from>185</Hsp_hit-from>
      <Hsp_hit-to>667</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>198</Hsp_identity>
      <Hsp_positive>259</Hsp_positive>
      <Hsp_gaps>138</Hsp_gaps>
      <Hsp_align-len>500</Hsp_align-len>
      <Hsp_qseq>LKDQPPFVGGVDSLELRDYQLDGLNWLAHSWCKGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRN--------------VIREYEWIHQQTKKLKFNALTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPDNGSD----NGYVS--------------LHKELEPFLLRRVKKDVERS-LPAK------------------------------------------------KCCNHCYLIKLPE---DENVDKHDALQSLVRSSGXXXXXXXXXXXXXETGHRVLIFSQMVRMLDILADYLAMKHFPF------------------------QDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ-------------EDIIERAKKKMVLDHLVIQRMDTTGKTVLQKGSA</Hsp_qseq>
      <Hsp_hseq>FRESPAYVNG----QLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLGYLRYIEKIPGPFLVIAPKSTLNNWLREINRWTPDVNAFILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPLK--------KINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFDDWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAVNGSNGSKESKTRLLNIMMQLRKCCNHPYLFDGAEPGPPYTTDEH-----LVYNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLKKKENKADS</Hsp_hseq>
      <Hsp_midline> ++ P +V G    +LR YQ+ G+NWL        + ILADEMGLGKT+QTISFL Y+ +  ++ GPFL++ P ST+ +W RE   W P++N  +  GD   R               VI  YE I ++   LK         +NW ++ +DEAHR+KN++S+L + L EF +  RLLITGTPLQN+L ELW+LL+F++PD  SD    + + S              LH  L+PFLLRR+K DVE S LP K                                                KCCNH YL    E       D+H     LV ++ KL +LDKLL +L+E G RVLIFSQM R+LDIL DY   +++ +                        + F FLL+TRAGGLGINL SAD VV++DSDWNPQ DLQA  RAHRIGQKKQ             E I+ERA +K+ LD LVIQ+  T+ K    K  +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YOR290C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:855147:860258:-1 gene:YOR290C transcript:YOR290C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SNF2 description:Catalytic subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; contains DNA-stimulated ATPase activity; functions interdependently in transcriptional activation with Snf5p and Snf6p [Source:SGD;Acc:S000005816]</Hit_def>
  <Hit_accession>YOR290C</Hit_accession>
  <Hit_len>1703</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>271.937</Hsp_bit-score>
      <Hsp_score>694</Hsp_score>
      <Hsp_evalue>6.77065e-76</Hsp_evalue>
      <Hsp_query-from>700</Hsp_query-from>
      <Hsp_query-to>1791</Hsp_query-to>
      <Hsp_hit-from>755</Hsp_hit-from>
      <Hsp_hit-to>1237</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>182</Hsp_identity>
      <Hsp_positive>249</Hsp_positive>
      <Hsp_gaps>143</Hsp_gaps>
      <Hsp_align-len>495</Hsp_align-len>
      <Hsp_qseq>LKDQPP-FVGGVDSLELRDYQLDGLNWLAHSWCKGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRN-------------VIREYEWIHQQTKKLKFNALTVLGAVNWAFLGVDEAHRLKNDDSLLYKSL-IEFKTNVRLLITGTPLQNSLKELWSLLHFIMPD-------------------NGSDNGYVS----------LHKELEPFLLRRVKKDVERSLP--------------------------------------------------AKKCCNHCYLIKLPEDENVDKHDALQSLVRSSGXXXXXXXXXXXXXETGHRVLIFSQMVRMLDILADYLA---------------------MKHFPFQD---FCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK-------------QEDIIERAKKKMVLDHLVIQ</Hsp_qseq>
      <Hsp_hseq>IKKQPSILVGGT----LKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLTYLYEMKNIRGPYLVIVPLSTLSNWSSEFAKWAPTLRTISFKGSPNERKAKQAKIRAGEFDVVLTTFEYI------IKERAL--LSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDVEKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQLKKICNHPFVFEEVEDQINPTRETNDDIWRVAGKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQ</Hsp_hseq>
      <Hsp_midline>+K QP   VGG     L+DYQ+ GL W+   +    + ILADEMGLGKTIQTIS L+Y++    + GP+L++VPLST+++W  EFA WAP +  + + G  + R              V+  +E+I      +K  AL  L  V W  + +DE HR+KN  S L  +L   +  + RL++TGTPLQN+L ELW+LL+F++P                     G D   +S          LHK L PFLLRR+KKDVE+ LP                                                   KK CNH ++ +  ED+     +    + R +GK  LLD++L +L+ TGHRVLIF QM +++DI+ D+L                      ++ F   D    CF+LSTRAGGLG+NL +ADTV+IFD+DWNP  DLQAQ RAHRIGQK              +E I+ERA KK+ +D  VIQ</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YIL126W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:117992:122071:1 gene:YIL126W transcript:YIL126W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STH1 description:ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic genes; promotes base excision repair in chromatin; essential helicase-related protein homologous to Snf2p [Source:SGD;Acc:S000001388]</Hit_def>
  <Hit_accession>YIL126W</Hit_accession>
  <Hit_len>1359</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>266.159</Hsp_bit-score>
      <Hsp_score>679</Hsp_score>
      <Hsp_evalue>3.81734e-74</Hsp_evalue>
      <Hsp_query-from>706</Hsp_query-from>
      <Hsp_query-to>1791</Hsp_query-to>
      <Hsp_hit-from>459</Hsp_hit-from>
      <Hsp_hit-to>941</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>174</Hsp_identity>
      <Hsp_positive>245</Hsp_positive>
      <Hsp_gaps>145</Hsp_gaps>
      <Hsp_align-len>495</Hsp_align-len>
      <Hsp_qseq>DQPP--FVGGVDSLELRDYQLDGLNWLAHSWCKGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRN-------------VIREYEWIHQQTKKLKFNALTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIE-FKTNVRLLITGTPLQNSLKELWSLLHFIMP------------------DNGSDNGYVS-----------LHKELEPFLLRRVKKDVERSLPAK---------------------------------------------------KCCNHCYLIKLPEDENVDKHDALQSLVRSSGXXXXXXXXXXXXXETGHRVLIFSQMVRMLDILADYLAMKHFPFQD------------------------FCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK-------------QEDIIERAKKKMVLDHLVIQ</Hsp_qseq>
      <Hsp_hseq>DKQPSILVGGT----LKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLITYLYEVKKDIGPFLVIVPLSTITNWTLEFEKWAPSLNTIIYKGTPNQRHSLQHQIRVGNFDVLLTTYEYIIKDK--------SLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEVEKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLNNKIMQLRKICNHPFVFDEVEGVVNPSRGNSDLLFRVAGKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQ</Hsp_hseq>
      <Hsp_midline>D+ P   VGG     L++YQL GL W+   +    + ILADEMGLGKTIQ+IS ++Y++   +  GPFL++VPLST+T+W  EF  WAP +N ++Y G  + R+             ++  YE+I +          ++L   +WA + +DE HR+KN  S L  ++   ++T  RL++TGTPLQN+L ELW+LL+F++P                  + G+                 LHK L PFLLRR+KK+VE+ LP K                                                   K CNH ++    E            L R +GK  LLD++L + + +GHRVL+F QM +++DI+ D+L MK   +                          FCFLLSTRAGGLG+NL +ADTV+IFD+DWNP  DLQAQ RAHRIGQK              +E I+ERA +K+ +D  VIQ</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YPL082C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:398480:404083:-1 gene:YPL082C transcript:YPL082C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MOT1 description:Essential protein involved in regulation of transcription; removes Spt15p (TBP) from DNA via its C-terminal ATPase activity; may have a role in ensuring that soluble TBP is available to bind TATA-less promoters; forms a complex with TBP that binds TATA DNA with high affinity but with altered specificity; the Mot1p-Spt15p-DNA ternary complex contains unbent DNA; coregulates transcription with Spt16p through assembly of preinitiation complex and organization of nucleosomes [Source:SGD;Acc:S000006003]</Hit_def>
  <Hit_accession>YPL082C</Hit_accession>
  <Hit_len>1867</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>176.407</Hsp_bit-score>
      <Hsp_score>446</Hsp_score>
      <Hsp_evalue>2.9781e-45</Hsp_evalue>
      <Hsp_query-from>745</Hsp_query-from>
      <Hsp_query-to>1731</Hsp_query-to>
      <Hsp_hit-from>1272</Hsp_hit-from>
      <Hsp_hit-to>1749</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>145</Hsp_identity>
      <Hsp_positive>197</Hsp_positive>
      <Hsp_gaps>149</Hsp_gaps>
      <Hsp_align-len>478</Hsp_align-len>
      <Hsp_qseq>LRDYQLDGLNWLAHSWCKGNSVILADEMGLGKTIQTISFL-SYMFHSHQVYG----------PFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRNVIREY---EWIHQQTKKLKFNALTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPD----------------NGSDNGYVS-------------LHKELEPFLLRRVK---------------------------------------KDVERSLPA-------------KKCCNHCYLIKLP------------EDENVDKHD--------ALQSLVRSSGXXXXXXXXXXXXXE--------TGHRVLIFSQMVRMLDILADYLAMKHFPFQDF--------------------------CFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK</Hsp_qseq>
      <Hsp_hseq>LRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQYAPFLKVVVYAGGPTVRLTLRPQLSDADIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQKNVVEKDIENSEIADGKQHIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKK</Hsp_hseq>
      <Hsp_midline>LR YQ DG+NWLA         IL D+MGLGKT+QTI  + S  +   + Y           P L++ P S    W+ EF  +AP + VVVY G  + R  +R       I   +  +  N L VL    + +  +DE H +KN  S L K++ E   N RL++TGTP+QN++ ELWSL  F+MP                   S N   S             LHK++ PF+LRR+K                                       KD+E S  A             +K CNH  L+  P            +   +D HD        AL++L+   G             +        + HR LIF Q+  MLD++ + L  K+ P   +                          C LL+T+ GGLG+NL  ADTV+  + DWNP NDLQA  RAHRIGQKK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YGL150C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:221104:225573:-1 gene:YGL150C transcript:YGL150C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INO80 description:ATPase and nucleosome spacing factor; subunit of complex containing actin and actin-related proteins that has chromatin remodeling activity and 3&apos; to 5&apos; DNA helicase activity in vitro; promotes nucleosome shifts in the 3 prime direction; has a role in modulating stress gene transcription [Source:SGD;Acc:S000003118]</Hit_def>
  <Hit_accession>YGL150C</Hit_accession>
  <Hit_len>1489</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>167.548</Hsp_bit-score>
      <Hsp_score>423</Hsp_score>
      <Hsp_evalue>1.44024e-42</Hsp_evalue>
      <Hsp_query-from>745</Hsp_query-from>
      <Hsp_query-to>1359</Hsp_query-to>
      <Hsp_hit-from>706</Hsp_hit-from>
      <Hsp_hit-to>947</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>93</Hsp_identity>
      <Hsp_positive>142</Hsp_positive>
      <Hsp_gaps>45</Hsp_gaps>
      <Hsp_align-len>246</Hsp_align-len>
      <Hsp_qseq>LRDYQLDGLNWLAHSWCKGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRNVIREYEWIHQQTKKLKFNA-----------------LTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMP----DNGSDNGYVS--------------------LHKELEPFLLRRVKKDVERSLPAK</Hsp_qseq>
      <Hsp_hseq>LKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWGPFLVVTPASTLHNWVNEISKFLPQFKILPYWGNANDRKVLRKF-W---DRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQLRRLHMILKPFMLRRVKKNVQSELGDK</Hsp_hseq>
      <Hsp_midline>L++YQL GLNWLA+ + +G + ILADEMGLGKT+Q+IS L+++  +H ++GPFL+V P ST+ +W  E + + P+  ++ Y G+ + R V+R++ W     K L++N                     L  + W ++ +DEA  +K+  S  +K+L+ F    RLL+TGTP+QNS++ELW+LLHFIMP     +   N + S                    LH  L+PF+LRRVKK+V+  L  K</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>99.7525</Hsp_bit-score>
      <Hsp_score>247</Hsp_score>
      <Hsp_evalue>1.15379e-21</Hsp_evalue>
      <Hsp_query-from>1498</Hsp_query-from>
      <Hsp_query-to>1815</Hsp_query-to>
      <Hsp_hit-from>1315</Hsp_hit-from>
      <Hsp_hit-to>1451</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>57</Hsp_identity>
      <Hsp_positive>78</Hsp_positive>
      <Hsp_gaps>41</Hsp_gaps>
      <Hsp_align-len>142</Hsp_align-len>
      <Hsp_qseq>GHRVLIFSQMVRMLDILADYLAMKHF---------PFQD--------------FCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ-------------EDIIERAKKKMVLDHLVIQRMDTTGKT</Hsp_qseq>
      <Hsp_hseq>GHRVLIYFQMTKMMDLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVME-----GKT</Hsp_hseq>
      <Hsp_midline>GHRVLI+ QM +M+D++ +YL  + +           +D              F FLLSTRAGGLGINL +ADTV+ +DSDWNP  D QA  RAHR+GQ +Q             E + +RAK+K  +  +V++     GKT</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YFR038W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:229380:231941:1 gene:YFR038W transcript:YFR038W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRC5 description:Putative ATPase containing the DEAD/H helicase-related sequence motif; null mutant displays increased levels of spontaneous Rad52p foci; SWAT-GFP and mCherry fusion proteins localize to the nucleus [Source:SGD;Acc:S000001934]</Hit_def>
  <Hit_accession>YFR038W</Hit_accession>
  <Hit_len>853</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>163.31</Hsp_bit-score>
      <Hsp_score>412</Hsp_score>
      <Hsp_evalue>1.07074e-41</Hsp_evalue>
      <Hsp_query-from>745</Hsp_query-from>
      <Hsp_query-to>1395</Hsp_query-to>
      <Hsp_hit-from>222</Hsp_hit-from>
      <Hsp_hit-to>477</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>106</Hsp_identity>
      <Hsp_positive>142</Hsp_positive>
      <Hsp_gaps>65</Hsp_gaps>
      <Hsp_align-len>269</Hsp_align-len>
      <Hsp_qseq>LRDYQLDGLNWLAHSWCKGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRN-----------------VIREYEWIHQQTKKLKFNALTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPD--------------------NGSD--------------NGYVSLHKELEPFLLRRVKKDV-ERSLPAKKCCNHCYLIKLP</Hsp_qseq>
      <Hsp_hseq>LKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIYE-MDTKGPFLVTAPLSTLDNWMNEFAKFAPDLPVLKYYGTNGYKERSAKLKNFFKQHGGTGIVITSYEIILRDTD--------LIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFDFDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVVLANILPPKR----EYIINCP</Hsp_hseq>
      <Hsp_midline>L+ YQL+GLNWL   +  G + ILADEMGLGKT+Q+I+ L++++      GPFL+  PLST+ +W  EFA +AP++ V+ Y G    +                  VI  YE I + T         ++ + NW FL VDE HRLKN +  L K L +  T+ RLL+TGTPLQN+L ELWSLL+FIMPD                    +GS+              N   +LH  L+PFLLRR+KK V    LP K+     Y+I  P</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>104.375</Hsp_bit-score>
      <Hsp_score>259</Hsp_score>
      <Hsp_evalue>2.99786e-23</Hsp_evalue>
      <Hsp_query-from>1423</Hsp_query-from>
      <Hsp_query-to>1833</Hsp_query-to>
      <Hsp_hit-from>594</Hsp_hit-from>
      <Hsp_hit-to>769</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>72</Hsp_identity>
      <Hsp_positive>95</Hsp_positive>
      <Hsp_gaps>39</Hsp_gaps>
      <Hsp_align-len>176</Hsp_align-len>
      <Hsp_qseq>ALQSLVRSSGXXXXXXXXXXXXXETGHRVLIFSQMVRMLDILADYLAMKHFP----------------FQDF--------CFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK-------------QEDIIERAKKKMVLDHLVIQ--RMDTTGKTVLQKGS</Hsp_qseq>
      <Hsp_hseq>TLETLLKTSGKLQILQKLIPPLISEGHKVLIYSQFVNMLDLIEDWCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVIQMGKFNNLKKLALNEGS</Hsp_hseq>
      <Hsp_midline> L++L+++SGKL +L KL+  L   GH+VLI+SQ V MLD++ D+  +  F                  + F         FLLSTRA GLGINL  ADTVV+FDSDWNPQ DLQA  R HRIGQ+              +  I+ RA  K  L+ +VIQ  + +   K  L +GS</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YDR334W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:1135932:1140476:1 gene:YDR334W transcript:YDR334W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWR1 description:Swi2/Snf2-related ATPase; structural component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; relocalizes to the cytosol in response to hypoxia; chronological aging factor that mediates lifespan extension by dietary restriction [Source:SGD;Acc:S000002742]</Hit_def>
  <Hit_accession>YDR334W</Hit_accession>
  <Hit_len>1514</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>162.54</Hsp_bit-score>
      <Hsp_score>410</Hsp_score>
      <Hsp_evalue>4.89548e-41</Hsp_evalue>
      <Hsp_query-from>745</Hsp_query-from>
      <Hsp_query-to>1359</Hsp_query-to>
      <Hsp_hit-from>696</Hsp_hit-from>
      <Hsp_hit-to>944</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>97</Hsp_identity>
      <Hsp_positive>129</Hsp_positive>
      <Hsp_gaps>60</Hsp_gaps>
      <Hsp_align-len>257</Hsp_align-len>
      <Hsp_qseq>LRDYQLDGLNWLAHSWCKGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRNVIRE--------------YEWIHQQTKKLKFNALTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPDNGSDNGYVS--------------------------------------LHKELEPFLLRRVKKDVERSLPAK</Hsp_qseq>
      <Hsp_hseq>LRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLAYLACEKENWGPHLIVVPTSVLLNWEMEFKRFAPGFKVLTYYGSPQQRKEKRKGWNKPDAFHVCIVSYQLVVQDQHSFK--------RKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLDAFQQWFGRPVDKIIETGQNFGQDKETKKTVAKLHQVLRPYLLRRLKADVEKQMPAK</Hsp_hseq>
      <Hsp_midline>LR YQ  GLNWLA  +    + ILADEMGLGKTIQTIS L+Y+    + +GP L+VVP S + +W+ EF  +AP   V+ Y G    R   R+              Y+ + Q     K           W ++ +DEAH +KN  S  +++L+ F T  RLL+TGTPLQN+L ELWSLL+F+MP    D   VS                                      LH+ L P+LLRR+K DVE+ +PAK</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>96.2857</Hsp_bit-score>
      <Hsp_score>238</Hsp_score>
      <Hsp_evalue>1.35376e-20</Hsp_evalue>
      <Hsp_query-from>1492</Hsp_query-from>
      <Hsp_query-to>1806</Hsp_query-to>
      <Hsp_hit-from>1260</Hsp_hit-from>
      <Hsp_hit-to>1400</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>52</Hsp_identity>
      <Hsp_positive>74</Hsp_positive>
      <Hsp_gaps>36</Hsp_gaps>
      <Hsp_align-len>141</Hsp_align-len>
      <Hsp_qseq>ETGHRVLIFSQMVRMLDILADYLAMKHFPFQDF-----------------------CFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK-------------QEDIIERAKKKMVLDHLVIQRMDTT</Hsp_qseq>
      <Hsp_hseq>DNGHRALIFTQMTKVLDVLEQFLNYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDFT</Hsp_hseq>
      <Hsp_midline>+ GHR LIF+QM ++LD+L  +L    + +                           F+LS+R+GGLGINL  ADTV+ +DSDWNP  D Q Q R HRIGQ +             + +I+++A +K  LD++VIQ  D T</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YAL019W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:I:114919:118314:1 gene:YAL019W transcript:YAL019W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FUN30 description:Snf2p family member with ATP-dependent chromatin remodeling activity; has a role in silencing at the mating type locus, telomeres and centromeres; enriched at centromeres and is required for correct chromatin structure around centromeres, as well as at the boundary element of the silent HMR; recruited to DNA double-strand breaks (DSBs) where it promotes 5&apos; strand resection of DSBs; potential Cdc28p substrate [Source:SGD;Acc:S000000017]</Hit_def>
  <Hit_accession>YAL019W</Hit_accession>
  <Hit_len>1131</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>144.821</Hsp_bit-score>
      <Hsp_score>364</Hsp_score>
      <Hsp_evalue>1.40857e-35</Hsp_evalue>
      <Hsp_query-from>592</Hsp_query-from>
      <Hsp_query-to>1383</Hsp_query-to>
      <Hsp_hit-from>537</Hsp_hit-from>
      <Hsp_hit-to>822</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>103</Hsp_identity>
      <Hsp_positive>143</Hsp_positive>
      <Hsp_gaps>56</Hsp_gaps>
      <Hsp_align-len>303</Hsp_align-len>
      <Hsp_qseq>SRKFQHCIDGYMANLRSKTLPTKECKALKQRPRFVALKDQPPFVGGVDSLELRDYQLDGLNWLAHSWCKGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRNVIRE--------YEWIHQQTKKLKFNALTV--LGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMP----------------------DNGSDNGYVS------LHKELEPFLLRRVKKDVERSLPAKKC-CNHCYL</Hsp_qseq>
      <Hsp_hseq>TRKNTHVISTTSRNGRKPIV-----KFFKGKPRLLS-----------PEISLKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFAYLKQINEP-GPHLVVVPSSTLENWLREFQKFAPALKIEPYYGSLQEREELRDILERNAGKYDVIVTTYNLAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLKELMSLLEFIMPNLFISKKESFDAIFKQRAKTTDDNKNHNPLLAQEAITRAKTMMKPFILRRRKDQVLKHLPPKHTHIQYCEL</Hsp_hseq>
      <Hsp_midline>+RK  H I     N R   +     K  K +PR ++             + L+DYQ  G+NWL   +    S ILAD+MGLGKT Q ISF +Y+   ++  GP L+VVP ST+ +W REF  +AP + +  Y G +  R  +R+        Y+ I         N   V  L   N+  +  DE H LKN  S  +  L++ + N RLL+TGTPLQN+LKEL SLL FIMP                      DN + N  ++          ++PF+LRR K  V + LP K     +C L</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>75.485</Hsp_bit-score>
      <Hsp_score>184</Hsp_score>
      <Hsp_evalue>3.00959e-14</Hsp_evalue>
      <Hsp_query-from>1357</Hsp_query-from>
      <Hsp_query-to>1785</Hsp_query-to>
      <Hsp_hit-from>926</Hsp_hit-from>
      <Hsp_hit-to>1097</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>59</Hsp_identity>
      <Hsp_positive>84</Hsp_positive>
      <Hsp_gaps>53</Hsp_gaps>
      <Hsp_align-len>184</Hsp_align-len>
      <Hsp_qseq>KKCCNHCYLI---KLPEDE--NVDKHDALQSLVRSSGXXXXXXXXXXXXXETGHRVLIFSQMVRMLDILADYLAMKHFPF----------------------QDF-CFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK-------------QEDIIERAKKKMVLDHLV</Hsp_qseq>
      <Hsp_hseq>KLCCNFPNTLSKYQLHNDEWMQSGKIDALKKLLKT------------IIVDKQEKVLIFSLFTQVLDILEMVLSTLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLALDSYI</Hsp_hseq>
      <Hsp_midline>K CCN    +   +L  DE     K DAL+ L+++             + +   +VLIFS   ++LDIL   L+   + F                      +D   F+LST+AGG GINL  A+ V+IFD  +NP +D QA  RAHR+GQ K             +E I + AK K+ LD  +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YJR035W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:497355:500612:1 gene:YJR035W transcript:YJR035W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAD26 description:Protein involved in transcription-coupled nucleotide excision repair; repairs UV-induced DNA lesions; recruitment to DNA lesions is dependent on an elongating RNA polymerase II; homolog of human CSB protein [Source:SGD;Acc:S000003796]</Hit_def>
  <Hit_accession>YJR035W</Hit_accession>
  <Hit_len>1085</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>134.806</Hsp_bit-score>
      <Hsp_score>338</Hsp_score>
      <Hsp_evalue>1.59282e-32</Hsp_evalue>
      <Hsp_query-from>1087</Hsp_query-from>
      <Hsp_query-to>1743</Hsp_query-to>
      <Hsp_hit-from>461</Hsp_hit-from>
      <Hsp_hit-to>775</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>96</Hsp_identity>
      <Hsp_positive>146</Hsp_positive>
      <Hsp_gaps>104</Hsp_gaps>
      <Hsp_align-len>319</Hsp_align-len>
      <Hsp_qseq>VNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPD----------------------NGSD----NGY---VSLHKELEPFLLRRVKKDVERSLPAKK--------------------------------------------CCNHCYLIKLPEDENVDKHDALQSLVRSSGXXXXXXXXXXXXXETGHRVLIFSQMVRMLDILADYLAMK--------------------------HFPFQDF-CFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQEDI</Hsp_qseq>
      <Hsp_hseq>VKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYLEFLHSSDLNQIQNGKRNVLFGIDILRKICNHPDLL----DRDTKRHNPDYGDPKRSGKMQVVKQLLLLWHKQGYKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNESFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSI</Hsp_hseq>
      <Hsp_midline>V W +  +DE H+++N DS +  +  + KT+ R++++GTP+QN+L ELWSL  FI P                       N ++     GY   V+L   + P+LLRRVK DV + LP KK                                             CNH  L+    D +  +H+      + SGK+ ++ +LL    + G++ L+F+Q  +MLDIL ++++ K                           F  + F  FLL+TR GGLG+NL  A+ ++IFD DWNP  D+QA+ RA RIGQK++  I</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>69.707</Hsp_bit-score>
      <Hsp_score>169</Hsp_score>
      <Hsp_evalue>1.79703e-12</Hsp_evalue>
      <Hsp_query-from>700</Hsp_query-from>
      <Hsp_query-to>984</Hsp_query-to>
      <Hsp_hit-from>283</Hsp_hit-from>
      <Hsp_hit-to>376</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>36</Hsp_identity>
      <Hsp_positive>52</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>95</Hsp_align-len>
      <Hsp_qseq>LKDQPPFVGGVDSLELRDYQLDGLNWLAHSWCKGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAPEMNVVV</Hsp_qseq>
      <Hsp_hseq>LNSQFKIPGEIYSL-LFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHHSGLLTGPVLIVCPATVMKQWCNEFQHWWPPLRTVI</Hsp_hseq>
      <Hsp_midline>L  Q    G + SL L +YQ   + WL   + +    I+ DEMGLGKTIQ I+F++ + HS  + GP L+V P + +  W  EF  W P +  V+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YBR114W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:467248:469620:1 gene:YBR114W transcript:YBR114W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAD16 description:Nucleotide excision repair (NER) protein; binds damaged DNA during NER; binds DNA in an ATP-dependent manner (with Rad7p) during NER; required for NER of non-transcribed chromatin; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex [Source:SGD;Acc:S000000318]</Hit_def>
  <Hit_accession>YBR114W</Hit_accession>
  <Hit_len>790</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>83.5741</Hsp_bit-score>
      <Hsp_score>205</Hsp_score>
      <Hsp_evalue>8.21031e-17</Hsp_evalue>
      <Hsp_query-from>682</Hsp_query-from>
      <Hsp_query-to>1251</Hsp_query-to>
      <Hsp_hit-from>157</Hsp_hit-from>
      <Hsp_hit-to>368</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>65</Hsp_identity>
      <Hsp_positive>110</Hsp_positive>
      <Hsp_gaps>38</Hsp_gaps>
      <Hsp_align-len>220</Hsp_align-len>
      <Hsp_qseq>RPRFVALKDQPPFV-------GGVDSLELRDYQLDGLNWL---AHSWCKGNSVILADEMGLGKTIQTISFLSYMFHSHQVYGPFLLVVPLSTVTSWQREFATWAP-EMNVVVYLG--------DMSSRNVI-----------REYEWIHQQTKKLKFNALTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFI</Hsp_qseq>
      <Hsp_hseq>RNVFTDLKNAPPYVPQRSKQPDGM-TIKLLPFQLEGLHWLISQEESIYAGG--VLADEMGMGKTIQTIALLM----NDLTKSPSLVVAPTVALMQWKNEIEQHTKGQLKIYIYHGASRTTDIKDLQGYDVVLTTYAVLESVFRKQNYGFRRKNGL-FKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLSGTPLQNRIGEMYSLIRFL</Hsp_hseq>
      <Hsp_midline>R  F  LK+ PP+V        G+ +++L  +QL+GL+WL     S   G   +LADEMG+GKTIQTI+ L     +     P L+V P   +  W+ E       ++ + +Y G        D+   +V+           R+  +  ++   L F   +VL  +++  + +DEAH +K+  S   +++   KT  R  ++GTPLQN + E++SL+ F+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>51.2174</Hsp_bit-score>
      <Hsp_score>121</Hsp_score>
      <Hsp_evalue>6.67772e-07</Hsp_evalue>
      <Hsp_query-from>1504</Hsp_query-from>
      <Hsp_query-to>1854</Hsp_query-to>
      <Hsp_hit-from>639</Hsp_hit-from>
      <Hsp_hit-to>781</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>42</Hsp_identity>
      <Hsp_positive>66</Hsp_positive>
      <Hsp_gaps>28</Hsp_gaps>
      <Hsp_align-len>144</Hsp_align-len>
      <Hsp_qseq>RVLIFSQMVRMLDILADYL---------------------AMKHFPFQDFC--FLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQEDI----IERAKKKMVLDHLVIQRMDTTGKTVLQKGSAPSSSTP</Hsp_qseq>
      <Hsp_hseq>KSIVFSQFTSMLDLVEWRLKRAGFQTVKLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDSIEARIIE-LQEKKANMIHATINQDEAAISRLTP</Hsp_hseq>
      <Hsp_midline>+ ++FSQ   MLD++   L                      +K+F     C  FL+S +AGG+ +NL  A  V I D  WNP  + Q+  R HRIGQ +   I    IE + +  +++ L  ++ +    T+ Q  +A S  TP</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YGL163C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:193707:196403:-1 gene:YGL163C transcript:YGL163C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAD54 description:DNA-dependent ATPase that stimulates strand exchange; modifies the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family of DNA translocases; forms nuclear foci upon DNA replication stress [Source:SGD;Acc:S000003131]</Hit_def>
  <Hit_accession>YGL163C</Hit_accession>
  <Hit_len>898</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>76.2554</Hsp_bit-score>
      <Hsp_score>186</Hsp_score>
      <Hsp_evalue>1.50531e-14</Hsp_evalue>
      <Hsp_query-from>811</Hsp_query-from>
      <Hsp_query-to>1320</Hsp_query-to>
      <Hsp_hit-from>332</Hsp_hit-from>
      <Hsp_hit-to>522</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>57</Hsp_identity>
      <Hsp_positive>86</Hsp_positive>
      <Hsp_gaps>31</Hsp_gaps>
      <Hsp_align-len>196</Hsp_align-len>
      <Hsp_qseq>ILADEMGLGKTIQTISFLSYMF----HSHQVYGPFLLVVPLSTVTSWQREFATW-APE-MNVVVYLGDMSS--------------------RNVIREYEWIHQQTKKLKFNALTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPDNGSDNGYVSLHKELEPFLLR</Hsp_qseq>
      <Hsp_hseq>IMADEMGLGKTLQCIALMWTLLRQGPQGKRLIDKCIIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLK---NCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNP--GLLGSRAEFRKNFENPILR</Hsp_hseq>
      <Hsp_midline>I+ADEMGLGKT+Q I+ +  +        ++    ++V P S V +W  E   W  P  +  +   G  SS                    RN+++    I  +T +   + L      N   +  DE HRLKN DSL + +L       R++++GTP+QN L E ++LL F  P  G         K  E  +LR</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>67.3958</Hsp_bit-score>
      <Hsp_score>163</Hsp_score>
      <Hsp_evalue>8.25099e-12</Hsp_evalue>
      <Hsp_query-from>1492</Hsp_query-from>
      <Hsp_query-to>1788</Hsp_query-to>
      <Hsp_hit-from>670</Hsp_hit-from>
      <Hsp_hit-to>805</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>42</Hsp_identity>
      <Hsp_positive>61</Hsp_positive>
      <Hsp_gaps>37</Hsp_gaps>
      <Hsp_align-len>136</Hsp_align-len>
      <Hsp_qseq>ETGHRVLIFSQMVRMLDILADYLAMKHFPF------------------------QDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKK-------------QEDIIERAKKKMVLDHLVI</Hsp_qseq>
      <Hsp_hseq>ESDDKIVLISNYTQTLDLIEKMCRYKHYSAVRLDGTMSINKRQKLVDRFNDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVV</Hsp_hseq>
      <Hsp_midline>E+  ++++ S   + LD++      KH+                          Q+F FLLS++AGG GINL  A+ +++ D DWNP  D QA AR  R GQKK             +E I +R   KM L   V+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YBR073W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:383112:385988:1 gene:YBR073W transcript:YBR073W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RDH54 description:DNA-dependent ATPase; DNA recombination/repair translocase, supercoils DNA and promotes DNA strand opening; stimulates strand exchange by modifying dsDNA topology; involved in recombinational repair of DNA double-strand breaks (DSBs) during mitosis and meiosis; phosphorylated in Mec1p-, Rad53p-dependent way in response to one DSB; contributes to remodelling of nucleosomes; proposed to be involved in crossover interference; interacts with Dmc1p; stimulates Dmc1p and Rad51p [Source:SGD;Acc:S000000277]</Hit_def>
  <Hit_accession>YBR073W</Hit_accession>
  <Hit_len>958</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>70.0922</Hsp_bit-score>
      <Hsp_score>170</Hsp_score>
      <Hsp_evalue>1.19744e-12</Hsp_evalue>
      <Hsp_query-from>811</Hsp_query-from>
      <Hsp_query-to>1257</Hsp_query-to>
      <Hsp_hit-from>343</Hsp_hit-from>
      <Hsp_hit-to>520</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>51</Hsp_identity>
      <Hsp_positive>81</Hsp_positive>
      <Hsp_gaps>41</Hsp_gaps>
      <Hsp_align-len>184</Hsp_align-len>
      <Hsp_qseq>ILADEMGLGKTIQTISFLSYMFHSHQVYGPF--------------------LLVVPLSTVTSWQREFATWAPEMNVVVYLGDMSSRN-------VIREYEWIHQQTKKLKFNALTVLGAVN--------WAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMP</Hsp_qseq>
      <Hsp_hseq>LLADDMGLGKTLMSITLIWTLIRQT----PFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVL--TLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHLIDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINP</Hsp_hseq>
      <Hsp_midline>+LAD+MGLGKT+ +I+ +  +        PF                    L+V P++ + +W+REF  W     + V    +SSRN        +R +  + +  + L      +L               L  DE HRLKN  S +  +L       +LL+TGTP+QN L E ++++ FI P</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>70.0922</Hsp_bit-score>
      <Hsp_score>170</Hsp_score>
      <Hsp_evalue>1.46883e-12</Hsp_evalue>
      <Hsp_query-from>1588</Hsp_query-from>
      <Hsp_query-to>1884</Hsp_query-to>
      <Hsp_hit-from>734</Hsp_hit-from>
      <Hsp_hit-to>838</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>40</Hsp_identity>
      <Hsp_positive>59</Hsp_positive>
      <Hsp_gaps>8</Hsp_gaps>
      <Hsp_align-len>106</Hsp_align-len>
      <Hsp_qseq>FCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQEDIIERAKKKMVLDHLVIQRM---DTTGKTVL----QKGSAPSSSTPFNKEELASIL</Hsp_qseq>
      <Hsp_hseq>FGFLLSAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKK-PCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLF</Hsp_hseq>
      <Hsp_midline>F FLLS ++GG+G+NL  A  +++FD+DWNP  DLQA +R HR GQKK    I R      +D  ++QR    ++  +  L     +    S+   FNKE+L  + </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YLR032W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:204991:208500:1 gene:YLR032W transcript:YLR032W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAD5 description:DNA helicase/Ubiquitin ligase; involved in error-free DNA damage tolerance (DDT), replication fork regression during postreplication repair by template switching, error-prone translesion synthesis; promotes synthesis of free and PCNA-bound polyubiquitin chains by Ubc13p-Mms2p; forms nuclear foci upon DNA replication stress; associates with native telomeres, cooperates with homologous recombination in senescent cells; human homolog HLTF can complement yeast null mutant [Source:SGD;Acc:S000004022]</Hit_def>
  <Hit_accession>YLR032W</Hit_accession>
  <Hit_len>1169</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>67.781</Hsp_bit-score>
      <Hsp_score>164</Hsp_score>
      <Hsp_evalue>6.2593e-12</Hsp_evalue>
      <Hsp_query-from>811</Hsp_query-from>
      <Hsp_query-to>1332</Hsp_query-to>
      <Hsp_hit-from>529</Hsp_hit-from>
      <Hsp_hit-to>772</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>62</Hsp_identity>
      <Hsp_positive>102</Hsp_positive>
      <Hsp_gaps>70</Hsp_gaps>
      <Hsp_align-len>244</Hsp_align-len>
      <Hsp_qseq>ILADEMGLGKTIQTISFLSYMFHSHQVYG------------------------PF-----LLVVPLSTVTSWQREF--ATWAPEM-NVVVYLGDMSSRNV-----------------IREYEWIHQQTKKLK---FNALTVLGAVNWAFLGVDEAHRLKNDDSLLYKSLIEFKTNVRLLITGTPLQNSLKELWSLLHFIMPD------------------NGSDNGYVSLHKELEPFLLRRVKK</Hsp_qseq>
      <Hsp_hseq>ILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKTLLTKTKTPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRNRTTVTSKAVMALQGKCKWVLTGTPIINRLDDLYSLVKFLELDPWRQINYWKTFVSTPFESKNYKQAFDVVNAILEPVLLRRTKQ</Hsp_hseq>
      <Hsp_midline>IL+DEMGLGKT+   S +    H   V                          P+     L+VVP+S +T W  EF  A  +P+M + V Y G++SS                    I + EW      ++     N  + L +VN+  + +DE H ++N  ++  K+++  +   + ++TGTP+ N L +L+SL+ F+  D                        +  ++  LEP LLRR K+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>49.6766</Hsp_bit-score>
      <Hsp_score>117</Hsp_score>
      <Hsp_evalue>2.17281e-06</Hsp_evalue>
      <Hsp_query-from>1498</Hsp_query-from>
      <Hsp_query-to>1725</Hsp_query-to>
      <Hsp_hit-from>1012</Hsp_hit-from>
      <Hsp_hit-to>1116</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>45</Hsp_positive>
      <Hsp_gaps>29</Hsp_gaps>
      <Hsp_align-len>105</Hsp_align-len>
      <Hsp_qseq>GHRVLIFSQMVRMLDILADYLA-------------------------MKHFPFQDFC----FLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQ</Hsp_qseq>
      <Hsp_hseq>GEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQ</Hsp_hseq>
      <Hsp_midline>G +V+IFSQ    LDIL   L                          +  F  +D+      LLS +AGG+G+NL  A    + D  W+P  + QA  R HRIGQ</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YOR191W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:692475:697334:1 gene:YOR191W transcript:YOR191W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ULS1 description:Swi2/Snf2-related translocase, SUMO-Targeted Ubiquitin Ligase (STUbL); required for maintenance of NHEJ inhibition at telomeres; functions at telomeres to translocate and ubiquitinylate poly-sumoylated Rap1p for proteosomal degradation; plays role in antagonizing silencing during mating-type switching; only known STUbL with a translocase activity; contains RING finger domain; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000005717]</Hit_def>
  <Hit_accession>YOR191W</Hit_accession>
  <Hit_len>1619</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>54.299</Hsp_bit-score>
      <Hsp_score>129</Hsp_score>
      <Hsp_evalue>9.20722e-08</Hsp_evalue>
      <Hsp_query-from>1501</Hsp_query-from>
      <Hsp_query-to>1734</Hsp_query-to>
      <Hsp_hit-from>1462</Hsp_hit-from>
      <Hsp_hit-to>1563</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>47</Hsp_positive>
      <Hsp_gaps>24</Hsp_gaps>
      <Hsp_align-len>102</Hsp_align-len>
      <Hsp_qseq>HRVLIFSQMVRMLDILADYLAMK-HFPFQDFC-----------------------FLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQ</Hsp_qseq>
      <Hsp_hseq>EKIIIFSQFTTFFEILEHFLKNKLNFPYLKYIGSMNAQRRSDVINEFYRDPEKRILLISMKAGNSGLTLTCANHVVIVDPFWNPYVEEQAQDRCYRISQTKK</Hsp_hseq>
      <Hsp_midline> +++IFSQ     +IL  +L  K +FP+  +                         L+S +AG  G+ L  A+ VVI D  WNP  + QAQ R +RI Q K+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>2054946303</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>

