<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
  <BlastOutput_program>blastx</BlastOutput_program>
  <BlastOutput_version>BLASTX 2.10.0+</BlastOutput_version>
  <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
  <BlastOutput_db>/home/smr/dbs/ensembl/release-100/Saccharomyces_cerevisiae.R64-1-1.pep.all.fa</BlastOutput_db>
  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
  <BlastOutput_query-def>PMZ_0055164-RA transcript Note:&quot;Similar to OTOR Otoraplin (Lithobates catesbeiana)&quot; offset:548 AED:0.33 eAED:0.36 QI:548|0.66|0.75|1|1|1|4|0|133</BlastOutput_query-def>
  <BlastOutput_query-len>950</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_matrix>BLOSUM62</Parameters_matrix>
      <Parameters_expect>1e-05</Parameters_expect>
      <Parameters_gap-open>11</Parameters_gap-open>
      <Parameters_gap-extend>1</Parameters_gap-extend>
      <Parameters_filter>L;</Parameters_filter>
    </Parameters>
  </BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
  <Iteration_iter-num>1</Iteration_iter-num>
  <Iteration_query-ID>Query_1</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055164-RA transcript Note:&quot;Similar to OTOR Otoraplin (Lithobates catesbeiana)&quot; offset:548 AED:0.33 eAED:0.36 QI:548|0.66|0.75|1|1|1|4|0|133</Iteration_query-def>
  <Iteration_query-len>950</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>90</Statistics_hsp-len>
      <Statistics_eff-space>524335142</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>2</Iteration_iter-num>
  <Iteration_query-ID>Query_2</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055167-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.46 eAED:1.00 QI:0|-1|0|1|-1|1|1|0|114</Iteration_query-def>
  <Iteration_query-len>345</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>77</Statistics_hsp-len>
      <Statistics_eff-space>91422946</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>3</Iteration_iter-num>
  <Iteration_query-ID>Query_3</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055168-RA transcript Note:&quot;Similar to STX5 Syntaxin-5 (Homo sapiens)&quot; offset:0 AED:0.03 eAED:0.03 QI:0|0.75|0.88|1|0.62|0.66|9|2453|254</Iteration_query-def>
  <Iteration_query-len>3218</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YLR026C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:195450:196472:-1 gene:YLR026C transcript:YLR026C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SED5 description:cis-Golgi t-SNARE syntaxin; required for vesicular transport between the ER and the Golgi complex; binds at least 9 SNARE proteins [Source:SGD;Acc:S000004016]</Hit_def>
  <Hit_accession>YLR026C</Hit_accession>
  <Hit_len>340</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>120.939</Hsp_bit-score>
      <Hsp_score>302</Hsp_score>
      <Hsp_evalue>4.30643e-30</Hsp_evalue>
      <Hsp_query-from>1</Hsp_query-from>
      <Hsp_query-to>711</Hsp_query-to>
      <Hsp_hit-from>1</Hsp_hit-from>
      <Hsp_hit-to>324</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>94</Hsp_identity>
      <Hsp_positive>141</Hsp_positive>
      <Hsp_gaps>89</Hsp_gaps>
      <Hsp_align-len>325</Hsp_align-len>
      <Hsp_qseq>MTCRDRTQEFMATCKSMQTRQNGIQ---------------VNRPLANAVRQRSEFTLMAKRIGKDLSSTFAKLEKLTLLAKRRSLFDDKAVEIEELTYIIKQDINSLNKQIAQLQEFVRAKGTQNGRHMQT-------HSSTVV-----------VSLQNLKQQRSR-----REQFSQTTISTLPPPIAN----GHGETLLKYDS----------------------------------------------YIQSRADAMQNIESTIVELGTIFQQLAHMVKEQEEQIQRIDSNVEDTQLNVEAAHSEILKYFQSVTSNRWLMVK</Hsp_qseq>
      <Hsp_hseq>MNIKDRTSEFQQSVLSYKKRNKNFREQQRERLQEKESENFANNTTGNG-KSVSEFQKKASGIAHEISSTAQLLSKLAVLAKRKPMFNDNPVEIAELSFLIKRKIYAIEQSLVQLSQLKKTDVNGNTSNQSSKQPSAVQHSKNVVNLLNTQMKNISGSFKDVLEERQRLEMANKDRWQKLTTDTGHAPADDQTQSNHAADLTTYNNSNPFMTSLLDESSEKNNNSSNQGELSFPQNDSQLMLMEEGQLSNNVYLQERNRAVETIESTIQEVGNLFQQLASMVQEQGEVIQRIDANVDDIDLNISGAQRELLKYFDRIKSNRWLAAK</Hsp_hseq>
      <Hsp_midline>M  +DRT EF  +  S + R    +                N    N  +  SEF   A  I  ++SST   L KL +LAKR+ +F+D  VEI EL+++IK+ I ++ + + QL +  +     N  +  +       HS  VV            S +++ ++R R     ++++ + T  T   P  +     H   L  Y++                                              Y+Q R  A++ IESTI E+G +FQQLA MV+EQ E IQRID+NV+D  LN+  A  E+LKYF  + SNRWL  K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>100</Statistics_hsp-len>
      <Statistics_eff-space>2190953124</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>4</Iteration_iter-num>
  <Iteration_query-ID>Query_4</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055170-RA transcript Note:&quot;Similar to PHYHD1 Phytanoyl-CoA dioxygenase domain-containing protein 1 (Bos taurus)&quot; offset:549 AED:0.39 eAED:0.39 QI:549|0.71|0.75|0.87|0.28|0.25|8|0|223</Iteration_query-def>
  <Iteration_query-len>1221</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>92</Statistics_hsp-len>
      <Statistics_eff-space>726663105</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>5</Iteration_iter-num>
  <Iteration_query-ID>Query_5</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055172-RA transcript Note:&quot;Similar to NFKBIA NF-kappa-B inhibitor alpha (Gallus gallus)&quot; offset:82 AED:0.10 eAED:0.10 QI:82|1|1|1|1|1|6|1999|320</Iteration_query-def>
  <Iteration_query-len>3044</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>2068510305</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>6</Iteration_iter-num>
  <Iteration_query-ID>Query_6</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055175-RA transcript Note:&quot;Similar to HOGA1 4-hydroxy-2-oxoglutarate aldolase, mitochondrial (Homo sapiens)&quot; offset:1137 AED:0.07 eAED:0.08 QI:1137|0.6|0.66|1|0.8|0.83|6|623|297</Iteration_query-def>
  <Iteration_query-len>2654</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>98</Statistics_hsp-len>
      <Statistics_eff-space>1782071862</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>7</Iteration_iter-num>
  <Iteration_query-ID>Query_7</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055187-RA transcript Note:&quot;Similar to Kcnk18 Potassium channel subfamily K member 18 (Mus musculus)&quot; offset:0 AED:0.07 eAED:0.07 QI:0|0.66|0.5|0.75|1|1|4|1140|527</Iteration_query-def>
  <Iteration_query-len>2724</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YJL093C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:254737:256812:-1 gene:YJL093C transcript:YJL093C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOK1 description:Outward-rectifier potassium channel of the plasma membrane; has two pore domains in tandem, each of which forms a functional channel permeable to potassium; carboxy tail functions to prevent inner gate closures; target of K1 toxin [Source:SGD;Acc:S000003629]</Hit_def>
  <Hit_accession>YJL093C</Hit_accession>
  <Hit_len>691</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.8322</Hsp_bit-score>
      <Hsp_score>120</Hsp_score>
      <Hsp_evalue>7.32705e-07</Hsp_evalue>
      <Hsp_query-from>1264</Hsp_query-from>
      <Hsp_query-to>1395</Hsp_query-to>
      <Hsp_hit-from>386</Hsp_hit-from>
      <Hsp_hit-to>429</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>27</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>44</Hsp_align-len>
      <Hsp_qseq>LATLAAYVALGALMMPFWEEWSYLDAFYFCFVTMTTIGLGDIVP</Hsp_qseq>
      <Hsp_hseq>IAIFMAFWLLGALVFKFAENWSYFNCIYFCFLCLLTIGYGDYAP</Hsp_hseq>
      <Hsp_midline>+A   A+  LGAL+  F E WSY +  YFCF+ + TIG GD  P</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>1828879603</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>8</Iteration_iter-num>
  <Iteration_query-ID>Query_8</Iteration_query-ID>
  <Iteration_query-def>PMZ_0001184-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.20 eAED:0.20 QI:0|0.33|0|0.75|0|0.25|4|617|165</Iteration_query-def>
  <Iteration_query-len>1115</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>647770760</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>9</Iteration_iter-num>
  <Iteration_query-ID>Query_9</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055194-RA transcript Note:&quot;Similar to RHOQ Rho-related GTP-binding protein RhoQ (Homo sapiens)&quot; offset:0 AED:0.16 eAED:0.16 QI:0|0|0|1|1|1|5|0|180</Iteration_query-def>
  <Iteration_query-len>543</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YLR229C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:604212:604787:-1 gene:YLR229C transcript:YLR229C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDC42 description:Small rho-like GTPase; essential for establishment and maintenance of cell polarity; plays a role late in cell fusion via activation of key cell fusion regulator Fus2p; mutants have defects in the organization of actin and septins; human homolog CDC42 can complement yeast cdc42 mutant [Source:SGD;Acc:S000004219]</Hit_def>
  <Hit_accession>YLR229C</Hit_accession>
  <Hit_len>191</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>206.838</Hsp_bit-score>
      <Hsp_score>525</Hsp_score>
      <Hsp_evalue>3.91831e-69</Hsp_evalue>
      <Hsp_query-from>1</Hsp_query-from>
      <Hsp_query-to>480</Hsp_query-to>
      <Hsp_hit-from>1</Hsp_hit-from>
      <Hsp_hit-to>179</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>105</Hsp_identity>
      <Hsp_positive>126</Hsp_positive>
      <Hsp_gaps>19</Hsp_gaps>
      <Hsp_align-len>179</Hsp_align-len>
      <Hsp_qseq>MDMLKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLW-------------------IDLRDDPKTIARLGLIKEKPIPYEQGMRMAKEIGAHCYLECSALTQKGLKPVFDEAILAILRP</Hsp_qseq>
      <Hsp_hseq>MQTLKCVVVGDGAVGKTCLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPPSFENVKEKWFPEVHHHCPGVPCLVVGTQIDLRDDKVIIEKLQRQRLRPITSEQGSRLARELKAVKYVECSALTQRGLKNVFDEAIVAALEP</Hsp_hseq>
      <Hsp_midline>M  LKCVVVGDGAVGKTCLL+SY  +QFP +YVPTVFD+YAV V +  E Y LGLFDTAGQED++ LRPLS+P TDVFLVCFSV++P SF N ++ W                   IDLRDD   I +L   + +PI  EQG R+A+E+ A  Y+ECSALTQ+GLK VFDEAI+A L P</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YPR165W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:875368:875997:1 gene:YPR165W transcript:YPR165W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO1 description:GTP-binding protein of the rho subfamily of Ras-like proteins; involved in establishment of cell polarity; regulates protein kinase C (Pkc1p) and the cell wall synthesizing enzyme 1,3-beta-glucan synthase (Fks1p and Gsc2p) [Source:SGD;Acc:S000006369]</Hit_def>
  <Hit_accession>YPR165W</Hit_accession>
  <Hit_len>209</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>153.295</Hsp_bit-score>
      <Hsp_score>386</Hsp_score>
      <Hsp_evalue>8.45188e-48</Hsp_evalue>
      <Hsp_query-from>13</Hsp_query-from>
      <Hsp_query-to>474</Hsp_query-to>
      <Hsp_hit-from>12</Hsp_hit-from>
      <Hsp_hit-to>184</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>78</Hsp_identity>
      <Hsp_positive>110</Hsp_positive>
      <Hsp_gaps>19</Hsp_gaps>
      <Hsp_align-len>173</Hsp_align-len>
      <Hsp_qseq>KCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWI-------------------DLRDDPKTIARLGLIKEKPIPYEQGMRMAKEIGAHCYLECSALTQKGLKPVFDEAILAIL</Hsp_qseq>
      <Hsp_hseq>KLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATRASL</Hsp_hseq>
      <Hsp_midline>K V+VGDGA GKTCLL+ ++  QFPE YVPTVF++Y  +V V+G +  L L+DTAGQED++ LRPLS+P ++V L+CFS+  P S  N ++ WI                   DLR+DP+TI +L    ++P+  ++G  +A +IGA  Y ECSA T  G++ VF+ A  A L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YNL180C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:299654:300649:-1 gene:YNL180C transcript:YNL180C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO5 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; RAC1 ortholog; regulated by phosphorylation and ubiquitination; likely involved in protein kinase C (Pkc1p)-dependent signal transduction pathway that controls cell integrity [Source:SGD;Acc:S000005124]</Hit_def>
  <Hit_accession>YNL180C</Hit_accession>
  <Hit_len>331</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>136.732</Hsp_bit-score>
      <Hsp_score>343</Hsp_score>
      <Hsp_evalue>4.96518e-40</Hsp_evalue>
      <Hsp_query-from>1</Hsp_query-from>
      <Hsp_query-to>513</Hsp_query-to>
      <Hsp_hit-from>1</Hsp_hit-from>
      <Hsp_hit-to>232</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>78</Hsp_identity>
      <Hsp_positive>111</Hsp_positive>
      <Hsp_gaps>61</Hsp_gaps>
      <Hsp_align-len>232</Hsp_align-len>
      <Hsp_qseq>MDMLKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAVNVTV------------------------------EGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWI------------------------------DLRDDPKTIARLGLIKEKPIPYEQGMRMAKEIGAHCYLECSALTQKGLKPVFDEAI-LAILRPRRACRPKHIHS</Hsp_qseq>
      <Hsp_hseq>MRSIKCVIIGDGAVGKTSLLISYTTNSFPTDYVPTVFDNYSTTIAIPNGTASSPLELDNGNDKRGSLSSASSSPSTDRKLYKINLWDTAGQEDYDRLRPLCYPQTDIFLICFSVSEHASFANVTEKWLPELKQTSNIEGTSLYTKLGKYPILLVGTKSDLRDDPATQKKLQEANSDYVSQEEIDELVQRCGFMGYTECSAATQAGVREVFEQAVRYAIYEPESPNQKSANHT</Hsp_hseq>
      <Hsp_midline>M  +KCV++GDGAVGKT LL+SY  + FP +YVPTVFD+Y+  + +                              + + Y + L+DTAGQED++ LRPL +P TD+FL+CFSV   ASF N  + W+                              DLRDDP T  +L       +  E+   + +  G   Y ECSA TQ G++ VF++A+  AI  P    +    H+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YNL090W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:456565:457143:1 gene:YNL090W transcript:YNL090W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO2 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity and in microtubule assembly [Source:SGD;Acc:S000005034]</Hit_def>
  <Hit_accession>YNL090W</Hit_accession>
  <Hit_len>192</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>121.324</Hsp_bit-score>
      <Hsp_score>303</Hsp_score>
      <Hsp_evalue>1.53143e-35</Hsp_evalue>
      <Hsp_query-from>13</Hsp_query-from>
      <Hsp_query-to>459</Hsp_query-to>
      <Hsp_hit-from>9</Hsp_hit-from>
      <Hsp_hit-to>173</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>70</Hsp_identity>
      <Hsp_positive>98</Hsp_positive>
      <Hsp_gaps>16</Hsp_gaps>
      <Hsp_align-len>165</Hsp_align-len>
      <Hsp_qseq>KCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWID--LRDDPKT-IARLGLIK-------------EKPIPYEQGMRMAKEIGAHCYLECSALTQKGLKPVFDEA</Hsp_qseq>
      <Hsp_hseq>KLVIIGDGACGKTSLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINARTKWADEALRYCPDAPIVLVGLKKDLRQEAHFKENATDEMVPIEDAKQVARAIGAKKYMECSALTGEGVDDVFEVA</Hsp_hseq>
      <Hsp_midline>K V++GDGA GKT LL  +   +FPE+Y PTVF++Y  +  V+G +  L L+DTAGQE++E LRP S+   D+ L+ F+V N  S  NAR  W D  LR  P   I  +GL K             ++ +P E   ++A+ IGA  Y+ECSALT +G+  VF+ A</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YKR055W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:548216:549091:1 gene:YKR055W transcript:YKR055W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO4 description:Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi [Source:SGD;Acc:S000001763]</Hit_def>
  <Hit_accession>YKR055W</Hit_accession>
  <Hit_len>291</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>121.324</Hsp_bit-score>
      <Hsp_score>303</Hsp_score>
      <Hsp_evalue>1.54345e-34</Hsp_evalue>
      <Hsp_query-from>10</Hsp_query-from>
      <Hsp_query-to>474</Hsp_query-to>
      <Hsp_hit-from>73</Hsp_hit-from>
      <Hsp_hit-to>239</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>67</Hsp_identity>
      <Hsp_positive>95</Hsp_positive>
      <Hsp_gaps>20</Hsp_gaps>
      <Hsp_align-len>171</Hsp_align-len>
      <Hsp_qseq>LKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAVNVTVEGEQYL-LGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLW---------------IDLRDDPKTIARLGLIKEKPIPYEQGMRMAKEIGAHCYLECSALTQKGLKPVFDEAILAIL</Hsp_qseq>
      <Hsp_hseq>LKIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKHFCPSTPIMLVGLKSDLYEADNLSDLVEP----SSAESLAKRLGAFAHIQCSARLKENIDEVFETAIHTLL</Hsp_hseq>
      <Hsp_midline>LK VVVGDGAVGKTCLL+SY    FP +Y+PT+F++Y  N+     Q + L L+DTAGQE++  LRPLS+   DV +VC+SV +  S  N  DLW               + L+ D      L  + E          +AK +GA  +++CSA  ++ +  VF+ AI  +L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YIL118W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:139752:140447:1 gene:YIL118W transcript:YIL118W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO3 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p [Source:SGD;Acc:S000001380]</Hit_def>
  <Hit_accession>YIL118W</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>112.464</Hsp_bit-score>
      <Hsp_score>280</Hsp_score>
      <Hsp_evalue>1.02124e-31</Hsp_evalue>
      <Hsp_query-from>13</Hsp_query-from>
      <Hsp_query-to>459</Hsp_query-to>
      <Hsp_hit-from>18</Hsp_hit-from>
      <Hsp_hit-to>206</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>67</Hsp_identity>
      <Hsp_positive>95</Hsp_positive>
      <Hsp_gaps>40</Hsp_gaps>
      <Hsp_align-len>189</Hsp_align-len>
      <Hsp_qseq>KCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWI-------------------DLRDD--------PKTIARLGLIKEKP-------------IPYEQGMRMAKEIGAHCYLECSALTQKGLKPVFDEA</Hsp_qseq>
      <Hsp_hseq>KIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITPNNIQQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECSAKLNKGVNEAFTEA</Hsp_hseq>
      <Hsp_midline>K V++GDGA GKT LL  +    FPE Y PTVF++Y  ++ V+ +   L L+DTAGQE+F+ LR LS+  T   ++CFS+ +  S  N ++ W+                   DLR++        P  I +   +                 I YE+G+ MAK+IGA  YLECSA   KG+   F EA</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YFL005W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:130334:130981:1 gene:YFL005W transcript:YFL005W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEC4 description:Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane [Source:SGD;Acc:S000001889]</Hit_def>
  <Hit_accession>YFL005W</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>71.2478</Hsp_bit-score>
      <Hsp_score>173</Hsp_score>
      <Hsp_evalue>4.56093e-16</Hsp_evalue>
      <Hsp_query-from>7</Hsp_query-from>
      <Hsp_query-to>450</Hsp_query-to>
      <Hsp_hit-from>20</Hsp_hit-from>
      <Hsp_hit-to>173</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>42</Hsp_identity>
      <Hsp_positive>79</Hsp_positive>
      <Hsp_gaps>8</Hsp_gaps>
      <Hsp_align-len>155</Hsp_align-len>
      <Hsp_qseq>MLKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTV-FDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWIDLRDDPKTIARLGLIKEKP------IPYEQGMRMAKEIGAHCYLECSALTQKGLKPVF</Hsp_qseq>
      <Hsp_hseq>IMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQLLLVGNKSDMETRVVTADQGEALAKELGIP-FIESSAKNDDNVNEIF</Hsp_hseq>
      <Hsp_midline>++K +++GD  VGK+CLL+ +  D+F   ++ T+  D     V + G++  L L+DTAGQE F  +    +      ++ + V +  +FTN +  +  + +     A+L L+  K       +  +QG  +AKE+G   ++E SA     +  +F</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YOR089C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:490196:490828:-1 gene:YOR089C transcript:YOR089C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VPS21 description:Endosomal Rab family GTPase; required for endocytic transport and sorting of vacuolar hydrolases; required for endosomal localization of the CORVET complex; required with YPT52 for MVB biogenesis and sorting; involved in autophagy and ionic stress tolerance; geranylgeranylation required for membrane association; protein abundance increases in response to DNA replication stress; mammalian Rab5 homolog; VPS21 has a paralog, YPT53, that arose from the whole genome duplication [Source:SGD;Acc:S000005615]</Hit_def>
  <Hit_accession>YOR089C</Hit_accession>
  <Hit_len>210</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>70.4774</Hsp_bit-score>
      <Hsp_score>171</Hsp_score>
      <Hsp_evalue>8.33258e-16</Hsp_evalue>
      <Hsp_query-from>10</Hsp_query-from>
      <Hsp_query-to>450</Hsp_query-to>
      <Hsp_hit-from>8</Hsp_hit-from>
      <Hsp_hit-to>164</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>44</Hsp_identity>
      <Hsp_positive>76</Hsp_positive>
      <Hsp_gaps>12</Hsp_gaps>
      <Hsp_align-len>158</Hsp_align-len>
      <Hsp_qseq>LKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAVN-VTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWIDLRDDPKTIARLGLI----------KEKPIPYEQGMRMAKEIGAHCYLECSALTQKGLKPVF</Hsp_qseq>
      <Hsp_hseq>IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGL-LFFETSAKTGENVNDVF</Hsp_hseq>
      <Hsp_midline>+K V++G+ AVGK+ +++ + ++ F E   PT+   +    VT+        ++DTAGQE F  L P+ +      LV + V  P SF  AR    +L +       + L+           E+ +  E+G ++A+E G   + E SA T + +  VF</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YGR152C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:794674:795492:-1 gene:YGR152C transcript:YGR152C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSR1 description:GTP-binding protein of the Ras superfamily; required for bud site selection, morphological changes in response to mating pheromone, and efficient cell fusion; localized to the plasma membrane; significantly similar to mammalian Rap GTPases [Source:SGD;Acc:S000003384]</Hit_def>
  <Hit_accession>YGR152C</Hit_accession>
  <Hit_len>272</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>69.707</Hsp_bit-score>
      <Hsp_score>169</Hsp_score>
      <Hsp_evalue>3.31458e-15</Hsp_evalue>
      <Hsp_query-from>13</Hsp_query-from>
      <Hsp_query-to>477</Hsp_query-to>
      <Hsp_hit-from>5</Hsp_hit-from>
      <Hsp_hit-to>167</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>45</Hsp_identity>
      <Hsp_positive>80</Hsp_positive>
      <Hsp_gaps>8</Hsp_gaps>
      <Hsp_align-len>163</Hsp_align-len>
      <Hsp_qseq>KCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFT---NARDLWIDLRDDPKT-----IARLGLIKEKPIPYEQGMRMAKEIGAHCYLECSALTQKGLKPVFDEAILAILR</Hsp_qseq>
      <Hsp_hseq>KLVVLGAGGVGKSCLTVQFVQGVYLDTYDPTIEDSYRKTIEIDNKVFDLEILDTAGIAQFTAMRELYIKSGMGFLLVYSVTDRQSLEELMELREQVLRIKDSDRVPMVLIGNKADLINERVISVEEGIEVSSKWGRVPFYETSALLRSNVDEVFVDLVRQIIR</Hsp_hseq>
      <Hsp_midline>K VV+G G VGK+CL + +    + + Y PT+ D Y   + ++ + + L + DTAG   F  +R L       FL+ +SV +  S       R+  + ++D  +        +  LI E+ I  E+G+ ++ + G   + E SAL +  +  VF + +  I+R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YML001W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:267174:267800:1 gene:YML001W transcript:YML001W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT7 description:Rab family GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); interacts with the cargo selection/retromer complex for retrograde sorting; similar to mammalian Rab7 [Source:SGD;Acc:S000004460]</Hit_def>
  <Hit_accession>YML001W</Hit_accession>
  <Hit_len>208</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>66.2402</Hsp_bit-score>
      <Hsp_score>160</Hsp_score>
      <Hsp_evalue>2.28536e-14</Hsp_evalue>
      <Hsp_query-from>4</Hsp_query-from>
      <Hsp_query-to>297</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>105</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>35</Hsp_identity>
      <Hsp_positive>59</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>100</Hsp_align-len>
      <Hsp_qseq>DMLKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTV-FDHYAVNVTVEGEQY-LLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWID</Hsp_qseq>
      <Hsp_hseq>NILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKS-WRD</Hsp_hseq>
      <Hsp_midline>++LK +++GD  VGKT L+  Y ND++ ++Y  T+  D     VTV+G++   + ++DTAGQE F+ L    +   D  ++ + V N +SF N +  W D</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YGL210W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:93792:94460:1 gene:YGL210W transcript:YGL210W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT32 description:Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication [Source:SGD;Acc:S000003178]</Hit_def>
  <Hit_accession>YGL210W</Hit_accession>
  <Hit_len>222</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>65.855</Hsp_bit-score>
      <Hsp_score>159</Hsp_score>
      <Hsp_evalue>4.07919e-14</Hsp_evalue>
      <Hsp_query-from>7</Hsp_query-from>
      <Hsp_query-to>477</Hsp_query-to>
      <Hsp_hit-from>13</Hsp_hit-from>
      <Hsp_hit-to>176</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>75</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>165</Hsp_align-len>
      <Hsp_qseq>MLKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAV-NVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWIDLRDDPKTIARLGLIKEKP-------IPYEQGMRMAKEIGAHCYLECSALTQKGLKPVFDEAILAILR</Hsp_qseq>
      <Hsp_hseq>LFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELRENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAME-NQMLFTETSALNSDNVDKAFRELIVAIFQ</Hsp_hseq>
      <Hsp_midline>+ K V++GD  VGK+ LL  +  D+F  E   T+   +A   + VE ++    ++DTAGQE +  +    +      L+ + +   +S+ N      +LR++      +GLI  K        +P ++    A E     + E SAL    +   F E I+AI +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YLR262C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:668244:668891:-1 gene:YLR262C transcript:YLR262C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT6 description:Rab family GTPase; required for endosome-to-Golgii, intra-Golgi retrograde, and retrograde Golgi-to-ER transport; temporarily at the Golgi, dissociating into the cytosol on arrival of the late Golgi GTPase Ypt32p; Golgi-localized form is GTP bound, while cytosolic form is GDP-bound; required for delivery of Atg9p to the phagophore assembly site during autophagy under heat stress, with Ypt6p for starvation induced autophagy and for the CVT pathway; homolog of mammalian Rab6 [Source:SGD;Acc:S000004252]</Hit_def>
  <Hit_accession>YLR262C</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>64.6994</Hsp_bit-score>
      <Hsp_score>156</Hsp_score>
      <Hsp_evalue>1.15257e-13</Hsp_evalue>
      <Hsp_query-from>13</Hsp_query-from>
      <Hsp_query-to>450</Hsp_query-to>
      <Hsp_hit-from>12</Hsp_hit-from>
      <Hsp_hit-to>166</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>46</Hsp_identity>
      <Hsp_positive>73</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>156</Hsp_align-len>
      <Hsp_qseq>KCVVVGDGAVGKTCLLMSYANDQFPEEYVPTV-FDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWI----DLRDDPKTI-----ARLGLIKEKPIPYEQGMRMAKEIGAHCYLECSALTQKGLKPVF</Hsp_qseq>
      <Hsp_hseq>KIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYI-DKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKALF</Hsp_hseq>
      <Hsp_midline>K V +G+  VGKT L+  +  D F + Y  T+  D  +  + ++ +   L L+DTAGQE F  L P     + V ++ + +    SF    D WI    + R D   I      +  L  E+ I  E+G + AK +GA  ++E S      +K +F</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YOR101W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:515244:516173:1 gene:YOR101W transcript:YOR101W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAS1 description:GTPase involved in G-protein signaling in adenylate cyclase activation; plays a role in cell proliferation; localized to the plasma membrane; homolog of mammalian RAS proto-oncogenes; relative distribution to the nucleus increases upon DNA replication stress; RAS1 has a paralog, RAS2, that arose from the whole genome duplication [Source:SGD;Acc:S000005627]</Hit_def>
  <Hit_accession>YOR101W</Hit_accession>
  <Hit_len>309</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>63.929</Hsp_bit-score>
      <Hsp_score>154</Hsp_score>
      <Hsp_evalue>4.46712e-13</Hsp_evalue>
      <Hsp_query-from>37</Hsp_query-from>
      <Hsp_query-to>477</Hsp_query-to>
      <Hsp_hit-from>20</Hsp_hit-from>
      <Hsp_hit-to>169</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>46</Hsp_identity>
      <Hsp_positive>78</Hsp_positive>
      <Hsp_gaps>13</Hsp_gaps>
      <Hsp_align-len>155</Hsp_align-len>
      <Hsp_qseq>AVGKTCLLMSYANDQFPEEYVPTVFDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWIDLR--DDPKTI------ARLGLIKEKPIPYEQGMRMAKEIGAHCYLECSALTQKGLKPVFDEAILAILR</Hsp_qseq>
      <Hsp_hseq>GVGKSALTIQFIQSYFVDEYDPTIEDSYRKQVVIDDKVSILDILDTAGQEEYSAMREQYMRTGEGFLLVYSVTSRNSFDELLSYYQQIQRVKDSDYIPVVVVGNKLDLENERQVSYEDGLRLAKQLNA-PFLETSAKQAINV----DEAFYSLIR</Hsp_hseq>
      <Hsp_midline> VGK+ L + +    F +EY PT+ D Y   V ++ +  +L + DTAGQE++  +R       + FL+ +SV +  SF      +  ++   D   I       +L L  E+ + YE G+R+AK++ A  +LE SA     +    DEA  +++R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YER031C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:214076:214747:-1 gene:YER031C transcript:YER031C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT31 description:Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi [Source:SGD;Acc:S000000833]</Hit_def>
  <Hit_accession>YER031C</Hit_accession>
  <Hit_len>223</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>61.6178</Hsp_bit-score>
      <Hsp_score>148</Hsp_score>
      <Hsp_evalue>1.42106e-12</Hsp_evalue>
      <Hsp_query-from>7</Hsp_query-from>
      <Hsp_query-to>477</Hsp_query-to>
      <Hsp_hit-from>13</Hsp_hit-from>
      <Hsp_hit-to>176</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>40</Hsp_identity>
      <Hsp_positive>77</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>165</Hsp_align-len>
      <Hsp_qseq>MLKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAV-NVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWIDLRDDPKTIARLGLIKEKP-------IPYEQGMRMAKEIGAHCYLECSALTQKGLKPVFDEAILAILR</Hsp_qseq>
      <Hsp_hseq>LFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELRENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQE-NQLLFTETSALNSENVDKAFEELINTIYQ</Hsp_hseq>
      <Hsp_midline>+ K V++GD  VGK+ LL  +  ++F  +   T+   +A   + ++G++    ++DTAGQE +  +    +      L+ + +   +S+ N      +LR++      +GLI  K        +P E+    A+E     + E SAL  + +   F+E I  I +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YNL093W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:449868:450530:1 gene:YNL093W transcript:YNL093W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT53 description:Stress-induced Rab family GTPase; required for vacuolar protein sorting and endocytosis; involved in ionic stress tolerance; similar to Vps21p and Ypt52p; functional homolog of Vps21p; mammalian Rab5 homolog; YPT53 has a paralog, VPS21, that arose from the whole genome duplication [Source:SGD;Acc:S000005037]</Hit_def>
  <Hit_accession>YNL093W</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>61.2326</Hsp_bit-score>
      <Hsp_score>147</Hsp_score>
      <Hsp_evalue>1.99352e-12</Hsp_evalue>
      <Hsp_query-from>10</Hsp_query-from>
      <Hsp_query-to>297</Hsp_query-to>
      <Hsp_hit-from>13</Hsp_hit-from>
      <Hsp_hit-to>108</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>55</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>97</Hsp_align-len>
      <Hsp_qseq>LKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAVN-VTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWID</Hsp_qseq>
      <Hsp_hseq>IKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQN-WVE</Hsp_hseq>
      <Hsp_midline>+K V++G+ AVGK+ +++ + +D F E   PT+   +    +T +G+     ++DTAGQE F  L P+ +      LV F V N  SF  A++ W++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YFL038C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:55366:55986:-1 gene:YFL038C transcript:YFL038C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT1 description:Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles [Source:SGD;Acc:S000001856]</Hit_def>
  <Hit_accession>YFL038C</Hit_accession>
  <Hit_len>206</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>60.8474</Hsp_bit-score>
      <Hsp_score>146</Hsp_score>
      <Hsp_evalue>2.15097e-12</Hsp_evalue>
      <Hsp_query-from>7</Hsp_query-from>
      <Hsp_query-to>450</Hsp_query-to>
      <Hsp_hit-from>8</Hsp_hit-from>
      <Hsp_hit-to>162</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>39</Hsp_identity>
      <Hsp_positive>76</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>157</Hsp_align-len>
      <Hsp_qseq>MLKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTV-FDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWIDLRDDPKTIARLGLI--------KEKPIPYEQGMRMAKEIGAHCYLECSALTQKGLKPVF</Hsp_qseq>
      <Hsp_hseq>LFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATSTVLKLLVGNKCDLKDKRVVEYDVAKEFA-DANKMPFLETSALDSTNVEDAF</Hsp_hseq>
      <Hsp_midline>+ K +++G+  VGK+CLL+ +++D +  +Y+ T+  D     V ++G+   L ++DTAGQE F  +    +  +   ++ + V +  SF N   +W+   D   T   L L+         ++ + Y+     A +     +LE SAL    ++  F</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>17</Hit_num>
  <Hit_id>YCR027C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:III:167370:167999:-1 gene:YCR027C transcript:YCR027C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHB1 description:Putative Rheb-related GTPase; involved in regulating canavanine resistance and arginine uptake; member of the Ras superfamily of G-proteins [Source:SGD;Acc:S000000622]</Hit_def>
  <Hit_accession>YCR027C</Hit_accession>
  <Hit_len>209</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>57.3806</Hsp_bit-score>
      <Hsp_score>137</Hsp_score>
      <Hsp_evalue>4.6993e-11</Hsp_evalue>
      <Hsp_query-from>13</Hsp_query-from>
      <Hsp_query-to>420</Hsp_query-to>
      <Hsp_hit-from>18</Hsp_hit-from>
      <Hsp_hit-to>172</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>42</Hsp_identity>
      <Hsp_positive>69</Hsp_positive>
      <Hsp_gaps>19</Hsp_gaps>
      <Hsp_align-len>155</Hsp_align-len>
      <Hsp_qseq>KCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWIDLRDD----------PKTIARLGLIK---EKPIPYEQGMRMAKEIGAH------CYLECSA</Hsp_qseq>
      <Hsp_hseq>KIALIGARNVGKTTLTVRFVESRFVESYYPTIENEFTRIIPYKSHDCTLEILDTAGQDEVSLLNIKSLTGVRGIILCYSIINRASFDLIPILWDKLVDQLGKDNLPVILVGTKADLGRSTKGVKRCVTKAEGEKLASTIGSQDKRNQAAFIECSA</Hsp_hseq>
      <Hsp_midline>K  ++G   VGKT L + +   +F E Y PT+ + +   +  +     L + DTAGQ++   L   S       ++C+S++N ASF     LW  L D             T A LG      ++ +   +G ++A  IG+        ++ECSA</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>18</Hit_num>
  <Hit_id>YNL098C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:439602:440570:-1 gene:YNL098C transcript:YNL098C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAS2 description:GTP-binding protein; regulates nitrogen starvation response, sporulation, and filamentous growth; farnesylation and palmitoylation required for activity and localization to plasma membrane; homolog of mammalian Ras proto-oncogenes; RAS2 has a paralog, RAS1, that arose from the whole genome duplication [Source:SGD;Acc:S000005042]</Hit_def>
  <Hit_accession>YNL098C</Hit_accession>
  <Hit_len>322</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>57.3806</Hsp_bit-score>
      <Hsp_score>137</Hsp_score>
      <Hsp_evalue>9.01539e-11</Hsp_evalue>
      <Hsp_query-from>37</Hsp_query-from>
      <Hsp_query-to>420</Hsp_query-to>
      <Hsp_hit-from>20</Hsp_hit-from>
      <Hsp_hit-to>154</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>42</Hsp_identity>
      <Hsp_positive>70</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>136</Hsp_align-len>
      <Hsp_qseq>AVGKTCLLMSYANDQFPEEYVPTVFDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLW---IDLRD-DPKTIARLG----LIKEKPIPYEQGMRMAKEIGAHCYLECSA</Hsp_qseq>
      <Hsp_hseq>GVGKSALTIQLTQSHFVDEYDPTIEDSYRKQVVIDDEVSILDILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQDGLNMAKQMNA-PFLETSA</Hsp_hseq>
      <Hsp_midline> VGK+ L +      F +EY PT+ D Y   V ++ E  +L + DTAGQE++  +R       + FL+ +S+ + +S       +   + ++D D   I  +G    L  EK + Y+ G+ MAK++ A  +LE SA</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>19</Hit_num>
  <Hit_id>YKR014C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:465367:466071:-1 gene:YKR014C transcript:YKR014C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT52 description:Endosomal Rab family GTPase; required for vacuolar protein sorting, endocytosis and multivesicular body (MVB) biogenesis and sorting; required for localization of the CORVET complex to endosomes; involved in autophagy and ionic stress tolerance; similar to Vps21p and Ypt53p; mammalian Rab5 homolog; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000001722]</Hit_def>
  <Hit_accession>YKR014C</Hit_accession>
  <Hit_len>234</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.2174</Hsp_bit-score>
      <Hsp_score>121</Hsp_score>
      <Hsp_evalue>8.42071e-09</Hsp_evalue>
      <Hsp_query-from>1</Hsp_query-from>
      <Hsp_query-to>450</Hsp_query-to>
      <Hsp_hit-from>1</Hsp_hit-from>
      <Hsp_hit-to>186</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>49</Hsp_identity>
      <Hsp_positive>84</Hsp_positive>
      <Hsp_gaps>40</Hsp_gaps>
      <Hsp_align-len>188</Hsp_align-len>
      <Hsp_qseq>MDMLKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHY-AVNVTV---EGEQYL-----LGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWID-----LRDDPKTIARLG----LIKEKP--------------------IPYEQGMRMAKEIGAHCYLECSALTQKGLKPVF</Hsp_qseq>
      <Hsp_hseq>MLQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARN-WVDELKNKVGDDDLVIYLLGNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGL-LFREVSAKTGEGVKEIF</Hsp_hseq>
      <Hsp_midline>M   K V++GD +VGK+ ++  +  D F E    T+   + + ++T+   +G +         ++DTAGQE ++ L P+ +   +  LV + +    S   AR+ W+D     + DD   I  LG    L +E P                    I  E+  + A+E G   + E SA T +G+K +F</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>20</Hit_num>
  <Hit_id>YLR293C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:720771:721430:-1 gene:YLR293C transcript:YLR293C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GSP1 description:Ran GTPase; GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; regulated by Srm1p, Rna1p, Yrb1p, Yrb2p, Yrp4p, Yrb30p, Cse1p and Kap95p; GSP1 has a paralog, GSP2, that arose from the whole genome duplication [Source:SGD;Acc:S000004284]</Hit_def>
  <Hit_accession>YLR293C</Hit_accession>
  <Hit_len>219</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>1.25983e-07</Hsp_evalue>
      <Hsp_query-from>10</Hsp_query-from>
      <Hsp_query-to>300</Hsp_query-to>
      <Hsp_hit-from>13</Hsp_hit-from>
      <Hsp_hit-to>110</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>49</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>98</Hsp_align-len>
      <Hsp_qseq>LKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTV-FDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWIDL</Hsp_qseq>
      <Hsp_hseq>FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL</Hsp_hseq>
      <Hsp_midline> K V+VGDG  GKT  +  +   +F ++Y+ T+  + + ++      +    ++DTAGQE F GLR   +      ++ F V +  ++ N  +   DL</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>21</Hit_num>
  <Hit_id>YOR185C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:681444:682106:-1 gene:YOR185C transcript:YOR185C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GSP2 description:GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication [Source:SGD;Acc:S000005711]</Hit_def>
  <Hit_accession>YOR185C</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>1.30593e-07</Hsp_evalue>
      <Hsp_query-from>10</Hsp_query-from>
      <Hsp_query-to>300</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>111</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>49</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>98</Hsp_align-len>
      <Hsp_qseq>LKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTV-FDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWIDL</Hsp_qseq>
      <Hsp_hseq>FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDL</Hsp_hseq>
      <Hsp_midline> K V+VGDG  GKT  +  +   +F ++Y+ T+  + + ++      +    ++DTAGQE F GLR   +      ++ F V +  ++ N  +   DL</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>22</Hit_num>
  <Hit_id>YBR264C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:737770:738369:-1 gene:YBR264C transcript:YBR264C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT10 description:Rab family GTP-binding protein; contains the PEST signal sequence specific for proteolytic enzymes; may be involved in vesicular transport; overexpression leads to accumulation of Golgi-like cisternae with budding vesicles [Source:SGD;Acc:S000000468]</Hit_def>
  <Hit_accession>YBR264C</Hit_accession>
  <Hit_len>199</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>1.3913e-07</Hsp_evalue>
      <Hsp_query-from>10</Hsp_query-from>
      <Hsp_query-to>306</Hsp_query-to>
      <Hsp_hit-from>5</Hsp_hit-from>
      <Hsp_hit-to>110</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>57</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>106</Hsp_align-len>
      <Hsp_qseq>LKCVVVGDGAVGKTCLLMSYANDQFPEEYVPTVFDHYAV-------NVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLWIDLRD</Hsp_qseq>
      <Hsp_hseq>IKVVLLGDSSVGKTSIVTRLKSGKFLAKHAATIGAAFITKTIEVPSNDSSTEKRIHMEIWDTAGQERYKSLVPMYYRDANIALIVFELGDVSSLQCAKTWFQDLQD</Hsp_hseq>
      <Hsp_midline>+K V++GD +VGKT ++    + +F  ++  T+   +         N +   ++  + ++DTAGQE ++ L P+ +   ++ L+ F + + +S   A+  + DL+D</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>23</Hit_num>
  <Hit_id>YML064C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:145139:145876:-1 gene:YML064C transcript:YML064C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEM1 description:GTP-binding protein of the Ras superfamily; involved in termination of M-phase; controls actomyosin and septin dynamics during cytokinesis [Source:SGD;Acc:S000004529]</Hit_def>
  <Hit_accession>YML064C</Hit_accession>
  <Hit_len>245</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>47.3654</Hsp_bit-score>
      <Hsp_score>111</Hsp_score>
      <Hsp_evalue>2.62771e-07</Hsp_evalue>
      <Hsp_query-from>22</Hsp_query-from>
      <Hsp_query-to>291</Hsp_query-to>
      <Hsp_hit-from>25</Hsp_hit-from>
      <Hsp_hit-to>115</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>46</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>91</Hsp_align-len>
      <Hsp_qseq>VVGDGAVGKTCLLMSYANDQFPEEYVPTV-FDHYAVNVTVEGEQYLLGLFDTAGQEDFEGLRPLSFPLTDVFLVCFSVVNPASFTNARDLW</Hsp_qseq>
      <Hsp_hseq>LVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDLGGQREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWY</Hsp_hseq>
      <Hsp_midline>+VGD  VGKT L++ Y  + + +EY  T+  +     V++     +  + D  GQ +F  + P++   + V +  F +  P + ++ ++ +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>24</Hit_num>
  <Hit_id>YNL089C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:456693:457169:-1 gene:YNL089C transcript:YNL089C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding description:Dubious open reading frame unlikely to encode a functional protein; almost completely overlaps YNL090W/RHO2 which encodes a small GTPase of the Rho/Rac subfamily of Ras-like proteins [Source:SGD;Acc:S000005033]</Hit_def>
  <Hit_accession>YNL089C</Hit_accession>
  <Hit_len>158</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>42.3578</Hsp_bit-score>
      <Hsp_score>98</Hsp_score>
      <Hsp_evalue>6.76176e-06</Hsp_evalue>
      <Hsp_query-from>132</Hsp_query-from>
      <Hsp_query-to>473</Hsp_query-to>
      <Hsp_hit-from>25</Hsp_hit-from>
      <Hsp_hit-to>154</Hsp_hit-to>
      <Hsp_query-frame>-2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>41</Hsp_identity>
      <Hsp_positive>58</Hsp_positive>
      <Hsp_gaps>16</Hsp_gaps>
      <Hsp_align-len>130</Hsp_align-len>
      <Hsp_qseq>RMARIASSNTGFRPFCVSAEHSR*QCAPISLAILMPCS*G----IGFSL---------MRPRRAIVLGSSRRSIQRSR---ALVKEAGFTTEKHTRKTSVSGNESGRSPSKSSCPAVSKSPSRYCSPSTV</Hsp_qseq>
      <Hsp_hseq>KLVLVATSKTSSTPSPVSALHSMYFLAPMALATCFASSMGTISSVAFSLKWASCLKSFFKPTRTIGASGQYRNASSAHFVLALISDSKLSTANPINIISAFEYENGRKRSYSSCPAVSQSVKDTFIPSTL</Hsp_hseq>
      <Hsp_midline>++  +A+S T   P  VSA HS    AP++LA     S G    + FSL          +P R I      R+   +    AL+ ++  +T       S    E+GR  S SSCPAVS+S      PST+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>84</Statistics_hsp-len>
      <Statistics_eff-space>228887699</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>10</Iteration_iter-num>
  <Iteration_query-ID>Query_10</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055196-RA transcript Note:&quot;Similar to PACC1 Proton-activated chloride channel (Bos taurus)&quot; offset:0 AED:0.20 eAED:0.20 QI:0|0.87|0.88|0.88|1|1|9|1795|429</Iteration_query-def>
  <Iteration_query-len>3085</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>2100159643</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>11</Iteration_iter-num>
  <Iteration_query-ID>Query_11</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055199-RA transcript Note:&quot;Similar to Dmac1 Distal membrane-arm assembly complex protein 1 (Mus musculus)&quot; offset:460 AED:0.01 eAED:0.01 QI:460|1|1|1|0.5|0.33|3|515|130</Iteration_query-def>
  <Iteration_query-len>1368</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>93</Statistics_hsp-len>
      <Statistics_eff-space>834996921</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>12</Iteration_iter-num>
  <Iteration_query-ID>Query_12</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055138-RA transcript Note:&quot;Similar to SSTR1 Somatostatin receptor type 1 (Canis lupus familiaris)&quot; offset:0 AED:0.04 eAED:0.04 QI:0|-1|0|1|-1|1|1|0|149</Iteration_query-def>
  <Iteration_query-len>450</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>81</Statistics_hsp-len>
      <Statistics_eff-space>164183223</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>13</Iteration_iter-num>
  <Iteration_query-ID>Query_13</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055141-RA transcript Note:&quot;Similar to RECQL4 ATP-dependent DNA helicase Q4 (Homo sapiens)&quot; offset:0 AED:0.39 eAED:0.42 QI:0|0.27|0.34|0.78|0.86|0.91|23|684|901</Iteration_query-def>
  <Iteration_query-len>3390</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YMR190C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:640915:645258:-1 gene:YMR190C transcript:YMR190C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SGS1 description:RecQ family nucleolar DNA helicase; role in genome integrity maintenance, chromosome synapsis, meiotic joint molecule/crossover formation; stimulates activity of Top3p; rapidly lost in response to rapamycin in Rrd1p-dependent manner; forms nuclear foci upon DNA replication stress; yeast SGS1 complements mutations in human homolog BLM implicated in Bloom syndrome; also similar to human WRN implicated in Werner syndrome; human BLM and WRN can each complement yeast null mutant [Source:SGD;Acc:S000004802]</Hit_def>
  <Hit_accession>YMR190C</Hit_accession>
  <Hit_len>1447</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>158.303</Hsp_bit-score>
      <Hsp_score>399</Hsp_score>
      <Hsp_evalue>1.688e-39</Hsp_evalue>
      <Hsp_query-from>640</Hsp_query-from>
      <Hsp_query-to>1728</Hsp_query-to>
      <Hsp_hit-from>672</Hsp_hit-from>
      <Hsp_hit-to>1040</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>121</Hsp_identity>
      <Hsp_positive>180</Hsp_positive>
      <Hsp_gaps>90</Hsp_gaps>
      <Hsp_align-len>411</Hsp_align-len>
      <Hsp_qseq>EVVQLQSIEPLYPPGPNGDPIGLSSLVVLSTGAGKSLCYQLPALMYARRSACITLVISPLVSLMDDQVSGL-PPGLKAACIHSNMTKAQR-------------------------------ISVIAKLPPIAFACIDEAHCLFEWSHNFRPSYLRLCKMGIR-----CMLGLTATATQSTVAQISRHI----------GITGDGAAVRVVDVPPNLLLTISCDPDRDRSPRFENLESIIVYCTRREETARIAALLRTSLQDFSTSLAPAADVESKSRATSGKRKQKASAKVSRWSAESYHAGMTAAERKAVQTRFMRGALRIVVATVAFGMGLDKADVRAIVHYNMPKSFESYVQEIGRAGRDGEPAHCHMFLDSEARDLQELRRHIYAN-TIDRITVKKLLQKTEEEFGY</Hsp_qseq>
      <Hsp_hseq>EVFKLPGFRPNQLEAVNATLQGKDVFVLMPTGGGKSLCYQLPAVVKSGKTHGTTIVISPLISLMQDQVEHLLNKNIKASMFSSRGTAEQRRQTFNLFINGLLDLVYISPEMISASEQCKRAISRLYADGKLARIVVDEAHCVSNWGHDFRPDYKEL-KFFKREYPDIPMIALTATASEQVRMDIIHNLELKEPVFLKQSFNRTNLYYEVNKKTKNTIFEI-CDAVKSR---FKN-QTGIIYCHSKKSCEQTSAQM-----------------------------QRNGIKCAY-----YHAGMEPDERLSVQKAWQADEIQVICATVAFGMGIDKPDVRFVYHFTVPRTLEGYYQETGRAGRDGNYSYCITYF--SFRDIRTMQTMIQKDKNLDRENKEKHLNKLQQVMAY</Hsp_hseq>
      <Hsp_midline>EV +L    P      N    G    V++ TG GKSLCYQLPA++ + ++   T+VISPL+SLM DQV  L    +KA+   S  T  QR                               IS +     +A   +DEAHC+  W H+FRP Y  L K   R      M+ LTATA++     I  ++                    V     N +  I CD  + R   F+N ++ I+YC  ++   + +A +                             Q+   K +      YHAGM   ER +VQ  +    ++++ ATVAFGMG+DK DVR + H+ +P++ E Y QE GRAGRDG  ++C  +     RD++ ++  I  +  +DR   +K L K ++   Y</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YOR204W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:722911:724725:1 gene:YOR204W transcript:YOR204W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DED1 description:ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase; required for translation initiation of all yeast mRNAs; binds to mRNA cap-associated factors, and binding stimulates Ded1p RNA-dependent ATPase activity; mutation in human homolog DBY is associated with male infertility; human homolog DDX3X complements ded1 null mutation; DED1 has a paralog, DBP1, that arose from the whole genome duplication [Source:SGD;Acc:S000005730]</Hit_def>
  <Hit_accession>YOR204W</Hit_accession>
  <Hit_len>604</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>57.7658</Hsp_bit-score>
      <Hsp_score>138</Hsp_score>
      <Hsp_evalue>6.60503e-09</Hsp_evalue>
      <Hsp_query-from>1195</Hsp_query-from>
      <Hsp_query-to>1638</Hsp_query-to>
      <Hsp_hit-from>372</Hsp_hit-from>
      <Hsp_hit-to>510</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>66</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>148</Hsp_align-len>
      <Hsp_qseq>ENLESIIVYCTRREETARIAALLRTSLQDFSTSLAPAADVESKSRATSGKRKQKASAKVSRWSAESYHAGMTAAERKAVQTRFMRGALRIVVATVAFGMGLDKADVRAIVHYNMPKSFESYVQEIGRAGRDGEPAHCHMFLDSEARDL</Hsp_qseq>
      <Hsp_hseq>ENITQKVLYVENQDKKSALLDLLSASTDGLTLIF-----VETKRMAD----QLTDFLIMQNFRATAIHGDRTQSERERALAAFRSGAATLLVATAVAARGLDIPNVTHVINYDLPSDVDDYVHRIGRTGRAGNTGLATAFFNSENSNI</Hsp_hseq>
      <Hsp_midline>EN+   ++Y   +++ + +  LL  S    +        VE+K  A     +      +  + A + H   T +ER+     F  GA  ++VAT     GLD  +V  +++Y++P   + YV  IGR GR G       F +SE  ++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YDR021W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:486804:488003:1 gene:YDR021W transcript:YDR021W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FAL1 description:Nucleolar protein required for maturation of 18S rRNA; member of the eIF4A subfamily of DEAD-box ATP-dependent RNA helicases; 18S rRNA biogenesis defect of the null mutant is functionally complemented by human EIF4A3 [Source:SGD;Acc:S000002428]</Hit_def>
  <Hit_accession>YDR021W</Hit_accession>
  <Hit_len>399</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>57.3806</Hsp_bit-score>
      <Hsp_score>137</Hsp_score>
      <Hsp_evalue>7.17615e-09</Hsp_evalue>
      <Hsp_query-from>1372</Hsp_query-from>
      <Hsp_query-to>1650</Hsp_query-to>
      <Hsp_hit-from>288</Hsp_hit-from>
      <Hsp_hit-to>378</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>48</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>93</Hsp_align-len>
      <Hsp_qseq>SRWSAESYHAGMTAAERKAVQTRFMRGALRIVVATVAFGMGLDKADVRAIVHYNMPKSFESYVQEIGRAGRDGEPAHCHMFLDSEARDLQELR</Hsp_qseq>
      <Hsp_hseq>SNFAVVSMHGDMKQEERDKVMNDFRTGHSRVLISTDVWARGIDVQQVSLVINYDLPEIIENYIHRIGRSGRFGRKGVAINFITKA--DLAKLR</Hsp_hseq>
      <Hsp_midline>S ++  S H  M   ER  V   F  G  R++++T  +  G+D   V  +++Y++P+  E+Y+  IGR+GR G       F+     DL +LR</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YPL119C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:324411:326264:-1 gene:YPL119C transcript:YPL119C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP1 description:Putative ATP-dependent RNA helicase of the DEAD-box protein family; mutants show reduced stability of the 40S ribosomal subunit scanning through 5&apos; untranslated regions of mRNAs; protein abundance increases in response to DNA replication stress; DBP1 has a paralog, DED1, that arose from the whole genome duplication [Source:SGD;Acc:S000006040]</Hit_def>
  <Hit_accession>YPL119C</Hit_accession>
  <Hit_len>617</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>54.299</Hsp_bit-score>
      <Hsp_score>129</Hsp_score>
      <Hsp_evalue>7.72908e-08</Hsp_evalue>
      <Hsp_query-from>1369</Hsp_query-from>
      <Hsp_query-to>1638</Hsp_query-to>
      <Hsp_hit-from>433</Hsp_hit-from>
      <Hsp_hit-to>522</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>90</Hsp_align-len>
      <Hsp_qseq>VSRWSAESYHAGMTAAERKAVQTRFMRGALRIVVATVAFGMGLDKADVRAIVHYNMPKSFESYVQEIGRAGRDGEPAHCHMFLDSEARDL</Hsp_qseq>
      <Hsp_hseq>MQNFKATAIHGDRTQAERERALSAFKANVADILVATAVAARGLDIPNVTHVINYDLPSDIDDYVHRIGRTGRAGNTGVATSFFNSNNQNI</Hsp_hseq>
      <Hsp_midline>+  + A + H   T AER+   + F      I+VAT     GLD  +V  +++Y++P   + YV  IGR GR G       F +S  +++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YNL112W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:413639:416281:1 gene:YNL112W transcript:YNL112W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP2 description:ATP-dependent RNA helicase of the DEAD-box protein family; has strong preference for dsRNA; interacts with YRA1; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites [Source:SGD;Acc:S000005056]</Hit_def>
  <Hit_accession>YNL112W</Hit_accession>
  <Hit_len>546</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.9138</Hsp_bit-score>
      <Hsp_score>128</Hsp_score>
      <Hsp_evalue>1.09557e-07</Hsp_evalue>
      <Hsp_query-from>1378</Hsp_query-from>
      <Hsp_query-to>1638</Hsp_query-to>
      <Hsp_hit-from>385</Hsp_hit-from>
      <Hsp_hit-to>471</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>87</Hsp_align-len>
      <Hsp_qseq>WSAESYHAGMTAAERKAVQTRFMRGALRIVVATVAFGMGLDKADVRAIVHYNMPKSFESYVQEIGRAGRDGEPAHCHMFLDSEARDL</Hsp_qseq>
      <Hsp_hseq>WPALAIHGDKDQRERDWVLQEFRNGRSPIMVATDVAARGIDVKGINYVINYDMPGNIEDYVHRIGRTGRAGATGTAISFFTEQNKGL</Hsp_hseq>
      <Hsp_midline>W A + H      ER  V   F  G   I+VAT     G+D   +  +++Y+MP + E YV  IGR GR G       F   + + L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YGL078C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:360288:361859:-1 gene:YGL078C transcript:YGL078C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP3 description:RNA-Dependent ATPase, member of DExD/H-box family; involved in cleavage of site A3 within the ITS1 spacer during rRNA processing; not essential for growth, but deletion causes severe slow-growth phenotype [Source:SGD;Acc:S000003046]</Hit_def>
  <Hit_accession>YGL078C</Hit_accession>
  <Hit_len>523</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>1.94363e-07</Hsp_evalue>
      <Hsp_query-from>1351</Hsp_query-from>
      <Hsp_query-to>1638</Hsp_query-to>
      <Hsp_hit-from>369</Hsp_hit-from>
      <Hsp_hit-to>470</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>47</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>102</Hsp_align-len>
      <Hsp_qseq>QKASAKVSR------WSAESYHAGMTAAERKAVQTRFMRGALRIVVATVAFGMGLDKADVRAIVHYNMPKSFESYVQEIGRAGRDGEPAHCHMFLDSEARDL</Hsp_qseq>
      <Hsp_hseq>KKEAARVERNLKYNGYNVAAIHGDLSQQQRTQALNEFKSGKSNLLLATDVAARGLDIPNVKTVINLTFPLTVEDYVHRIGRTGRAGQTGTAHTLFTEQEKHL</Hsp_hseq>
      <Hsp_midline>+K +A+V R      ++  + H  ++  +R      F  G   +++AT     GLD  +V+ +++   P + E YV  IGR GR G+    H     + + L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YDL160C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:170410:171930:-1 gene:YDL160C transcript:YDL160C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DHH1 description:Cytoplasmic DEAD-box helicase, stimulates mRNA decapping; coordinates distinct steps in mRNA function and decay, interacting with both decapping and deadenylase complexes; role in translational repression, mRNA decay, and possibly mRNA export; interacts and cooperates with Ngr1p to promote specific mRNA decay; ATP- and RNA-bound form promotes processing body (PB) assembly, while ATPase stimulation by Not1p promotes PB disassembly; forms cytoplasmic foci on replication stress [Source:SGD;Acc:S000002319]</Hit_def>
  <Hit_accession>YDL160C</Hit_accession>
  <Hit_len>506</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>3.74947e-07</Hsp_evalue>
      <Hsp_query-from>1333</Hsp_query-from>
      <Hsp_query-to>1590</Hsp_query-to>
      <Hsp_hit-from>291</Hsp_hit-from>
      <Hsp_hit-to>378</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>45</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>88</Hsp_align-len>
      <Hsp_qseq>TSGKRKQKASAKVSRWSAESY--HAGMTAAERKAVQTRFMRGALRIVVATVAFGMGLDKADVRAIVHYNMPKSFESYVQEIGRAGRDG</Hsp_qseq>
      <Hsp_hseq>NSTNRVELLAKKITDLGYSCYYSHARMKQQERNKVFHEFRQGKVRTLVCSDLLTRGIDIQAVNVVINFDFPKTAETYLHRIGRSGRFG</Hsp_hseq>
      <Hsp_midline> S  R +  + K++      Y  HA M   ER  V   F +G +R +V +     G+D   V  +++++ PK+ E+Y+  IGR+GR G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YDR291W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:1039728:1042961:1 gene:YDR291W transcript:YDR291W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HRQ1 description:3&apos;-5&apos; DNA helicase that has DNA strand annealing activity; helicase activity is stimulated by fork structure and 3&apos;-tail length of substrates; acts with Rad4p in nucleotide-excision repair; belongs to the widely conserved RecQ family of proteins which are involved in maintaining genomic integrity; similar to the human RecQ4p implicated in Rothmund-Thomson syndrome (RTS) [Source:SGD;Acc:S000002699]</Hit_def>
  <Hit_accession>YDR291W</Hit_accession>
  <Hit_len>1077</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.521</Hsp_bit-score>
      <Hsp_score>114</Hsp_score>
      <Hsp_evalue>5.49209e-06</Hsp_evalue>
      <Hsp_query-from>1390</Hsp_query-from>
      <Hsp_query-to>1584</Hsp_query-to>
      <Hsp_hit-from>567</Hsp_hit-from>
      <Hsp_hit-to>631</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>38</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>65</Hsp_align-len>
      <Hsp_qseq>SYHAGMTAAERKAVQTRFMRGALRIVVATVAFGMGLDKADVRAIVHYNMPKSFESYVQEIGRAGR</Hsp_qseq>
      <Hsp_hseq>SYRGGYSASDRRKIEREMFHGNLKAVISTNALELGIDIGGLDAVLMCGFPLSMANFHQQSGRAGR</Hsp_hseq>
      <Hsp_midline>SY  G +A++R+ ++     G L+ V++T A  +G+D   + A++    P S  ++ Q+ GRAGR</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YDL084W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:305237:306577:1 gene:YDL084W transcript:YDL084W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUB2 description:Component of the TREX complex required for nuclear mRNA export; member of the DEAD-box RNA helicase superfamily and is involved in early and late steps of spliceosome assembly; homolog of the human splicing factor hUAP56; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000002242]</Hit_def>
  <Hit_accession>YDL084W</Hit_accession>
  <Hit_len>446</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>47.3654</Hsp_bit-score>
      <Hsp_score>111</Hsp_score>
      <Hsp_evalue>9.23519e-06</Hsp_evalue>
      <Hsp_query-from>1201</Hsp_query-from>
      <Hsp_query-to>1626</Hsp_query-to>
      <Hsp_hit-from>281</Hsp_hit-from>
      <Hsp_hit-to>413</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>63</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>142</Hsp_align-len>
      <Hsp_qseq>LESIIVYCTRREETARIAALLRTSLQDFSTSLAPAADVESKSRATSGKRKQKASAKVSRWSAESYHAGMTAAERKAVQTRFMRGALRIVVATVAFGMGLDKADVRAIVHYNMPKSFESYVQEIGRAGRDGEPAHCHMFLDSE</Hsp_qseq>
      <Hsp_hseq>LQQYYIKLEEREKNRKLAQLLDDL--EFNQVIIF---VKSTTRANELTKLLNAS----NFPAITVHGHMKQEERIARYKAFKDFEKRICVSTDVFGRGIDIERINLAINYDLTNEADQYLHRVGRAGRFGTKGLAISFVSSK</Hsp_hseq>
      <Hsp_midline>L+   +    RE+  ++A LL     +F+  +     V+S +RA    +   AS     + A + H  M   ER A    F     RI V+T  FG G+D   +   ++Y++    + Y+  +GRAGR G       F+ S+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>100</Statistics_hsp-len>
      <Statistics_eff-space>2321689010</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>14</Iteration_iter-num>
  <Iteration_query-ID>Query_14</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055142-RA transcript Note:&quot;Similar to ZFPL1 Zinc finger protein-like 1 (Homo sapiens)&quot; offset:60 AED:0.18 eAED:0.18 QI:60|0.6|0.83|1|1|1|6|876|272</Iteration_query-def>
  <Iteration_query-len>1755</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>95</Statistics_hsp-len>
      <Statistics_eff-space>1120662830</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>15</Iteration_iter-num>
  <Iteration_query-ID>Query_15</Iteration_query-ID>
  <Iteration_query-def>PMZ_0029514-RA transcript Note:&quot;Similar to ZNF318 Zinc finger protein 318 (Homo sapiens)&quot; offset:89 AED:0.04 eAED:0.04 QI:89|0.42|0.37|1|0.42|0.5|8|476|1132</Iteration_query-def>
  <Iteration_query-len>3964</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>101</Statistics_hsp-len>
      <Statistics_eff-space>2741909740</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>16</Iteration_iter-num>
  <Iteration_query-ID>Query_16</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055143-RA transcript Note:&quot;Similar to Spdya Speedy protein A (Rattus norvegicus)&quot; offset:59 AED:0.33 eAED:0.33 QI:59|1|0.8|1|0.5|0.4|5|0|298</Iteration_query-def>
  <Iteration_query-len>956</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>90</Statistics_hsp-len>
      <Statistics_eff-space>528975276</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>17</Iteration_iter-num>
  <Iteration_query-ID>Query_17</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055144-RA transcript Note:&quot;Similar to YY1 Transcriptional repressor protein YY1 (Homo sapiens)&quot; offset:498 AED:0.02 eAED:0.02 QI:498|1|1|1|0.25|0.4|5|747|367</Iteration_query-def>
  <Iteration_query-len>2349</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YOR113W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:534075:536819:1 gene:YOR113W transcript:YOR113W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AZF1 description:Zinc-finger transcription factor; involved in diauxic shift; in the presence of glucose, activates transcription of genes involved in growth and carbon metabolism; in nonfermentable carbon sources, activates transcription of genes involved in maintenance of cell wall integrity; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005639]</Hit_def>
  <Hit_accession>YOR113W</Hit_accession>
  <Hit_len>914</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>84.3445</Hsp_bit-score>
      <Hsp_score>207</Hsp_score>
      <Hsp_evalue>3.58299e-17</Hsp_evalue>
      <Hsp_query-from>1312</Hsp_query-from>
      <Hsp_query-to>1593</Hsp_query-to>
      <Hsp_hit-from>586</Hsp_hit-from>
      <Hsp_hit-to>675</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>40</Hsp_identity>
      <Hsp_positive>60</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>94</Hsp_align-len>
      <Hsp_qseq>HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTKAR</Hsp_qseq>
      <Hsp_hseq>NTRAVKKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDY--CGKRFTQGGNLRTHERLHTGEKPYSC--DICDKKFSRKGNLAAHLVTHQKLK</Hsp_hseq>
      <Hsp_midline>+T   + H C  C + F +++ L+ H   H G +PF C +  CGKRF+   NLRTH R+HTG++PY C  D C+KKF++  NL +H++TH K +</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>84.3445</Hsp_bit-score>
      <Hsp_score>207</Hsp_score>
      <Hsp_evalue>3.61387e-17</Hsp_evalue>
      <Hsp_query-from>1252</Hsp_query-from>
      <Hsp_query-to>1569</Hsp_query-to>
      <Hsp_hit-from>595</Hsp_hit-from>
      <Hsp_hit-to>697</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>40</Hsp_identity>
      <Hsp_positive>62</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>107</Hsp_align-len>
      <Hsp_qseq>CPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSH</Hsp_qseq>
      <Hsp_hseq>CPY--CHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDI--CDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAH</Hsp_hseq>
      <Hsp_midline>CP+  C ++F   + +  H+ +H G +  VC  CGK F +   L+ H+ +HTGE+P+ C    C K+FS   NL  H+  H   +P+VC  ++CNK F Q  N+K+H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YPR186C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:909733:911022:-1 gene:YPR186C transcript:YPR186C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PZF1 description:Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA [Source:SGD;Acc:S000006390]</Hit_def>
  <Hit_accession>YPR186C</Hit_accession>
  <Hit_len>429</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>76.2554</Hsp_bit-score>
      <Hsp_score>186</Hsp_score>
      <Hsp_evalue>4.44787e-15</Hsp_evalue>
      <Hsp_query-from>1240</Hsp_query-from>
      <Hsp_query-to>1578</Hsp_query-to>
      <Hsp_hit-from>47</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>65</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>115</Hsp_align-len>
      <Hsp_qseq>KTIACPHKGCTKMFRDNSAMRKH-LHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILT</Hsp_qseq>
      <Hsp_hseq>KTYFCDYDGCDKAFTRPSILTEHQLSVHQGLRAFQCDKCAKSFVKKSHLERHLYTHSDTKPFQCSY--CGKGVTTRQQLKRHEVTHT--KSFICPEEGCNLRFYKHPQLRAHILS</Hsp_hseq>
      <Hsp_midline>KT  C + GC K F   S + +H L  H G R   C +C K+FV+ S L+RH   H+  +PFQC++  CGK  +    L+ H   HT  + ++CP + CN +F +   L++HIL+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>62.003</Hsp_bit-score>
      <Hsp_score>149</Hsp_score>
      <Hsp_evalue>1.44345e-10</Hsp_evalue>
      <Hsp_query-from>1225</Hsp_query-from>
      <Hsp_query-to>1581</Hsp_query-to>
      <Hsp_hit-from>127</Hsp_hit-from>
      <Hsp_hit-to>244</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>39</Hsp_identity>
      <Hsp_positive>59</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>123</Hsp_align-len>
      <Hsp_qseq>EVDSSKTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTG---ERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYV-CPYDSCNKKFAQSTNLKSHILTH</Hsp_qseq>
      <Hsp_hseq>EVTHTKSFICPEEGCNLRFYKHPQLRAHILSVHLHKLTCPHCNKSFQRPYRLRNHISKHHDPEVENPYQCTFAGCCKEFRIWSQLQSHIK---NDHPKLKCPI--CSKPCVGENGLQMHMIIH</Hsp_hseq>
      <Hsp_midline>EV  +K+  CP +GC   F  +  +R H+ +       C  C K+F    +L+ H   H     E P+QCTF GC K F +   L++HI+    D P + CP   C+K       L+ H++ H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>59.3066</Hsp_bit-score>
      <Hsp_score>142</Hsp_score>
      <Hsp_evalue>1.21995e-09</Hsp_evalue>
      <Hsp_query-from>1324</Hsp_query-from>
      <Hsp_query-to>1635</Hsp_query-to>
      <Hsp_hit-from>46</Hsp_hit-from>
      <Hsp_hit-to>141</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>40</Hsp_identity>
      <Hsp_positive>51</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>107</Hsp_align-len>
      <Hsp_qseq>PRVHVCAE--CGKAFVESSKLKRHQL-VHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTKARKK*GAWTLCRERGC</Hsp_qseq>
      <Hsp_hseq>PKTYFCDYDGCDKAFTRPSILTEHQLSVHQGLRAFQC--DKCAKSFVKKSHLERHLYTHSDTKPFQCSY--CGKGVTTRQQLKRHEVTHTKS-------FICPEEGC</Hsp_hseq>
      <Hsp_midline>P+ + C    C KAF   S L  HQL VH G R FQC  + C K F    +L  H+  H+  +P+ C Y  C K       LK H +THTK+        +C E GC</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YJL056C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:330431:333073:-1 gene:YJL056C transcript:YJL056C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZAP1 description:Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains [Source:SGD;Acc:S000003592]</Hit_def>
  <Hit_accession>YJL056C</Hit_accession>
  <Hit_len>880</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>75.485</Hsp_bit-score>
      <Hsp_score>184</Hsp_score>
      <Hsp_evalue>1.61143e-14</Hsp_evalue>
      <Hsp_query-from>1267</Hsp_query-from>
      <Hsp_query-to>1596</Hsp_query-to>
      <Hsp_hit-from>745</Hsp_hit-from>
      <Hsp_hit-to>851</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>39</Hsp_identity>
      <Hsp_positive>60</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>111</Hsp_align-len>
      <Hsp_qseq>CTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTKARK</Hsp_qseq>
      <Hsp_hseq>CHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHI--CNKKFAISSSLKIHIRTHTGEKPLQCKI--CGKRFNESSNLSKHIKTHQKKYK</Hsp_hseq>
      <Hsp_midline>C + F     + +HL  H   + + C  C + F     L +H   H+GE+P++C    C K+F++  +L+ HIR HTG++P  C    C K+F +S+NL  HI TH K  K</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>72.7886</Hsp_bit-score>
      <Hsp_score>177</Hsp_score>
      <Hsp_evalue>1.28066e-13</Hsp_evalue>
      <Hsp_query-from>1246</Hsp_query-from>
      <Hsp_query-to>1584</Hsp_query-to>
      <Hsp_hit-from>705</Hsp_hit-from>
      <Hsp_hit-to>819</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>45</Hsp_identity>
      <Hsp_positive>63</Hsp_positive>
      <Hsp_gaps>10</Hsp_gaps>
      <Hsp_align-len>119</Hsp_align-len>
      <Hsp_qseq>IACPHKGCTKMFRDNSAMRKHLH----THGPRVHVCA--ECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHT</Hsp_qseq>
      <Hsp_hseq>VICQWDGCNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKC--KTCKRCFSSEETLVQHTRTHSGEKPYKCHI--CNKKFAISSSLKIHIRTHT</Hsp_hseq>
      <Hsp_midline>+ C   GC K F     +  HL     T G   + C   +C + F +  KL RH  VH+  +P++C  + C + FS +  L  H R H+G++PY C    CNKKFA S++LK HI THT</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>62.003</Hsp_bit-score>
      <Hsp_score>149</Hsp_score>
      <Hsp_evalue>2.52526e-10</Hsp_evalue>
      <Hsp_query-from>1261</Hsp_query-from>
      <Hsp_query-to>1566</Hsp_query-to>
      <Hsp_hit-from>771</Hsp_hit-from>
      <Hsp_hit-to>867</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>40</Hsp_identity>
      <Hsp_positive>50</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>103</Hsp_align-len>
      <Hsp_qseq>KGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKS</Hsp_qseq>
      <Hsp_hseq>KTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKI--CGKRFNESSNLSKHIKTHQ--KKYKC--SDCSKSFDDLGKLNS</Hsp_hseq>
      <Hsp_midline>K C + F     + +H  TH G + + C  C K F  SS LK H   HTGE+P QC    CGKRF+   NL  HI+ H   + Y C    C+K F     L S</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YNL027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:579580:581616:1 gene:YNL027W transcript:YNL027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRZ1 description:Transcription factor, activates transcription of stress response genes; nuclear localization is positively regulated by calcineurin-mediated dephosphorylation; rapidly localizes to the nucleus under blue light stress; can be activated in stochastic pulses of nuclear localization in response to calcium [Source:SGD;Acc:S000004972]</Hit_def>
  <Hit_accession>YNL027W</Hit_accession>
  <Hit_len>678</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>63.929</Hsp_bit-score>
      <Hsp_score>154</Hsp_score>
      <Hsp_evalue>6.21133e-11</Hsp_evalue>
      <Hsp_query-from>1321</Hsp_query-from>
      <Hsp_query-to>1593</Hsp_query-to>
      <Hsp_hit-from>565</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>47</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>99</Hsp_align-len>
      <Hsp_qseq>GPRVHVCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVC--------PYDSCNKKFAQSTNLKSHILTHTKAR</Hsp_qseq>
      <Hsp_hseq>NPANFACDVCGKKFTRPYNLKSHLRTHTNERPFICSI--CGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPW-GCGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline> P    C  CGK F     LK H   HT ERPF C+   CGK F+   + + H  +HTG + YVC        P+  C KKFA+S  L  H  T +  R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>1.3991e-07</Hsp_evalue>
      <Hsp_query-from>1267</Hsp_query-from>
      <Hsp_query-to>1503</Hsp_query-to>
      <Hsp_hit-from>574</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>8</Hsp_gaps>
      <Hsp_align-len>87</Hsp_align-len>
      <Hsp_qseq>CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGERPFQCTFE-------GCGKRFSLDFNLRTHIRIHTGDR</Hsp_qseq>
      <Hsp_hseq>CGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline>C K F     ++ HL TH   R  +C+ CGKAF      KRH+ +HTG++ + C  +       GCGK+F+    L  H +  +G R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>2.57144e-06</Hsp_evalue>
      <Hsp_query-from>1381</Hsp_query-from>
      <Hsp_query-to>1596</Hsp_query-to>
      <Hsp_hit-from>555</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>40</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>72</Hsp_align-len>
      <Hsp_qseq>KRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTKARK</Hsp_qseq>
      <Hsp_hseq>KLDSVTNNRKNPANFACDVCGKKFTRPYNLKSHLRTHTNERPFICSI--CGKAFARQHDRKRHEDLHTGKKR</Hsp_hseq>
      <Hsp_midline>K   + +  + P     + CGK+F+  +NL++H+R HT +RP++C    C K FA+  + K H   HT  ++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YPR013C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:584632:585585:-1 gene:YPR013C transcript:YPR013C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CMR3 description:Putative zinc finger protein; YPR013C is not an essential gene [Source:SGD;Acc:S000006217]</Hit_def>
  <Hit_accession>YPR013C</Hit_accession>
  <Hit_len>317</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>59.6918</Hsp_bit-score>
      <Hsp_score>143</Hsp_score>
      <Hsp_evalue>5.27433e-10</Hsp_evalue>
      <Hsp_query-from>1339</Hsp_query-from>
      <Hsp_query-to>1503</Hsp_query-to>
      <Hsp_hit-from>256</Hsp_hit-from>
      <Hsp_hit-to>310</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>CAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDR</Hsp_qseq>
      <Hsp_hseq>CPVCGKICSRPSTLKTHYLIHTGDTPFKCTWEGCTKSFNVKSNMLRHLKSHERKR</Hsp_hseq>
      <Hsp_midline>C  CGK     S LK H L+HTG+ PF+CT+EGC K F++  N+  H++ H   R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>1.71575e-06</Hsp_evalue>
      <Hsp_query-from>1438</Hsp_query-from>
      <Hsp_query-to>1599</Hsp_query-to>
      <Hsp_hit-from>259</Hsp_hit-from>
      <Hsp_hit-to>312</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>54</Hsp_align-len>
      <Hsp_qseq>CGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTKARKK</Hsp_qseq>
      <Hsp_hseq>CGKICSRPSTLKTHYLIHTGDTPFKCTWEGCTKSFNVKSNMLRHLKSHERKRNK</Hsp_hseq>
      <Hsp_midline>CGK  S    L+TH  IHTGD P+ C ++ C K F   +N+  H+ +H + R K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YGL035C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:431548:433062:-1 gene:YGL035C transcript:YGL035C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG1 description:Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state [Source:SGD;Acc:S000003003]</Hit_def>
  <Hit_accession>YGL035C</Hit_accession>
  <Hit_len>504</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>60.4622</Hsp_bit-score>
      <Hsp_score>145</Hsp_score>
      <Hsp_evalue>5.7295e-10</Hsp_evalue>
      <Hsp_query-from>1315</Hsp_query-from>
      <Hsp_query-to>1506</Hsp_query-to>
      <Hsp_hit-from>32</Hsp_hit-from>
      <Hsp_hit-to>95</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>64</Hsp_align-len>
      <Hsp_qseq>THGPRVHVCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRP</Hsp_qseq>
      <Hsp_hseq>SEAPRPHACPICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRIHTNSHP</Hsp_hseq>
      <Hsp_midline>+  PR H C  C +AF       RH  +HTGE+P  C F GC KRFS    L  H RIHT   P</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YPR015C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:590283:591026:-1 gene:YPR015C transcript:YPR015C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding description:Putative zinc finger transcription factor; binds DNA in sequence-specific manner; overexpression causes a cell cycle delay or arrest [Source:SGD;Acc:S000006219]</Hit_def>
  <Hit_accession>YPR015C</Hit_accession>
  <Hit_len>247</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>57.3806</Hsp_bit-score>
      <Hsp_score>137</Hsp_score>
      <Hsp_evalue>1.61123e-09</Hsp_evalue>
      <Hsp_query-from>1339</Hsp_query-from>
      <Hsp_query-to>1491</Hsp_query-to>
      <Hsp_hit-from>187</Hsp_hit-from>
      <Hsp_hit-to>237</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>51</Hsp_align-len>
      <Hsp_qseq>CAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIH</Hsp_qseq>
      <Hsp_hseq>CPICGKVCSRPSTLRTHYLIHTGDTPFKCTWEHCNKSFNVKSNMLRHLRTH</Hsp_hseq>
      <Hsp_midline>C  CGK     S L+ H L+HTG+ PF+CT+E C K F++  N+  H+R H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>3.64925e-08</Hsp_evalue>
      <Hsp_query-from>1324</Hsp_query-from>
      <Hsp_query-to>1599</Hsp_query-to>
      <Hsp_hit-from>151</Hsp_hit-from>
      <Hsp_hit-to>245</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>36</Hsp_identity>
      <Hsp_positive>48</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>97</Hsp_align-len>
      <Hsp_qseq>PRVHVCAECGKAFVESSK---LKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTK--ARKK</Hsp_qseq>
      <Hsp_hseq>PNVHIGQNPGTLLSQTQTDLDLIQKQLRAVVKLRKQCPI--CGKVCSRPSTLRTHYLIHTGDTPFKCTWEHCNKSFNVKSNMLRHLRTHQKKIAKKK</Hsp_hseq>
      <Hsp_midline>P VH+    G    ++     L + QL    +   QC    CGK  S    LRTH  IHTGD P+ C ++ CNK F   +N+  H+ TH K  A+KK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YGL254W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:22304:23203:1 gene:YGL254W transcript:YGL254W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FZF1 description:Transcription factor involved in sulfite metabolism; sole identified regulatory target is SSU1; overexpression suppresses sulfite-sensitivity of many unrelated mutants due to hyperactivation of SSU1, contains five zinc fingers; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003223]</Hit_def>
  <Hit_accession>YGL254W</Hit_accession>
  <Hit_len>299</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.6102</Hsp_bit-score>
      <Hsp_score>135</Hsp_score>
      <Hsp_evalue>3.96047e-09</Hsp_evalue>
      <Hsp_query-from>1348</Hsp_query-from>
      <Hsp_query-to>1596</Hsp_query-to>
      <Hsp_hit-from>19</Hsp_hit-from>
      <Hsp_hit-to>99</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>83</Hsp_align-len>
      <Hsp_qseq>CGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTKARK</Hsp_qseq>
      <Hsp_hseq>CEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTL--CQKRFVTNQQLRRHLNSHERKSK</Hsp_hseq>
      <Hsp_midline>C K +   S L++HQ  HT ++P+ C   GCGK+F    +LR H   H+  +P  C    C K+F  +  L+ H+ +H +  K</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>53.9138</Hsp_bit-score>
      <Hsp_score>128</Hsp_score>
      <Hsp_evalue>3.3134e-08</Hsp_evalue>
      <Hsp_query-from>1402</Hsp_query-from>
      <Hsp_query-to>1629</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>80</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>76</Hsp_align-len>
      <Hsp_qseq>TGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTKARKK*GAWTLCRER</Hsp_qseq>
      <Hsp_hseq>TKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPK--ACTLCQKR</Hsp_hseq>
      <Hsp_midline>T  R ++C+F+GC K ++    L+ H   HT  +PY C    C KKF +  +L+ H  TH++ + K  A TLC++R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YDR146C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:748613:750742:-1 gene:YDR146C transcript:YDR146C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWI5 description:Transcription factor that recruits Mediator and Swi/Snf complexes; activates transcription of genes expressed at the M/G1 phase boundary and in G1 phase; required for expression of the HO gene controlling mating type switching; localization to nucleus occurs during G1 and appears to be regulated by phosphorylation by Cdc28p kinase; SWI5 has a paralog, ACE2, that arose from the whole genome duplication [Source:SGD;Acc:S000002553]</Hit_def>
  <Hit_accession>YDR146C</Hit_accession>
  <Hit_len>709</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.6102</Hsp_bit-score>
      <Hsp_score>135</Hsp_score>
      <Hsp_evalue>1.02882e-08</Hsp_evalue>
      <Hsp_query-from>1408</Hsp_query-from>
      <Hsp_query-to>1581</Hsp_query-to>
      <Hsp_hit-from>547</Hsp_hit-from>
      <Hsp_hit-to>604</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>ERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTH</Hsp_qseq>
      <Hsp_hseq>DKTFECLFPGCTKTFKRRYNIRSHIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSH</Hsp_hseq>
      <Hsp_midline>++ F+C F GC K F   +N+R+HI+ H  DRPY C +  C+K F ++ +L  H  +H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>47.3654</Hsp_bit-score>
      <Hsp_score>111</Hsp_score>
      <Hsp_evalue>7.04722e-06</Hsp_evalue>
      <Hsp_query-from>1240</Hsp_query-from>
      <Hsp_query-to>1479</Hsp_query-to>
      <Hsp_hit-from>548</Hsp_hit-from>
      <Hsp_hit-to>626</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>42</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>83</Hsp_align-len>
      <Hsp_qseq>KTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTH</Hsp_qseq>
      <Hsp_hseq>KTFECLFPGCTKTFKRRYNIRSHIQTHLEDRPYSCDHPGCDKAFVRNHDLIRHKKSHQ-EKAYACP---CGKKFNREDALVVH</Hsp_hseq>
      <Hsp_midline>KT  C   GCTK F+    +R H+ TH   R + C    C KAFV +  L RH+  H  E+ + C    CGK+F+ +  L  H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YLR131C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:404510:406822:-1 gene:YLR131C transcript:YLR131C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACE2 description:Transcription factor required for septum destruction after cytokinesis; phosphorylation by Cbk1p blocks nuclear exit during M/G1 transition, causing localization to daughter cell nuclei, and also increases Ace2p activity; phosphorylation by Cdc28p and Pho85p prevents nuclear import during cell cycle phases other than cytokinesis; part of RAM network that regulates cellular polarity and morphogenesis; ACE2 has a paralog, SWI5, that arose from the whole genome duplication [Source:SGD;Acc:S000004121]</Hit_def>
  <Hit_accession>YLR131C</Hit_accession>
  <Hit_len>770</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.225</Hsp_bit-score>
      <Hsp_score>134</Hsp_score>
      <Hsp_evalue>1.67709e-08</Hsp_evalue>
      <Hsp_query-from>1417</Hsp_query-from>
      <Hsp_query-to>1593</Hsp_query-to>
      <Hsp_hit-from>603</Hsp_hit-from>
      <Hsp_hit-to>661</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>FQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTKAR</Hsp_qseq>
      <Hsp_hseq>FECLYPNCNKVFKRRYNIRSHIQTHLQDRPYSCDFPGCTKAFVRNHDLIRHKISHNAKK</Hsp_hseq>
      <Hsp_midline>F+C +  C K F   +N+R+HI+ H  DRPY C +  C K F ++ +L  H ++H   +</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>47.3654</Hsp_bit-score>
      <Hsp_score>111</Hsp_score>
      <Hsp_evalue>9.18922e-06</Hsp_evalue>
      <Hsp_query-from>1336</Hsp_query-from>
      <Hsp_query-to>1569</Hsp_query-to>
      <Hsp_hit-from>606</Hsp_hit-from>
      <Hsp_hit-to>679</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>78</Hsp_align-len>
      <Hsp_qseq>VCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSH</Hsp_qseq>
      <Hsp_hseq>LYPNCNKVFKRRYNIRSHIQTHLQDRPYSCDFPGCTKAFVRNHDLIRHKISHNAKK-YICP---CGKRFNREDALMVH</Hsp_hseq>
      <Hsp_midline>+   C K F     ++ H   H  +RP+ C F GC K F  + +L  H   H   + Y+CP   C K+F +   L  H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YGL209W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:95858:97006:1 gene:YGL209W transcript:YGL209W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG2 description:Zinc finger transcriptional repressor; cooperates with Mig1p in glucose-induced gene repression; under low glucose conditions relocalizes to mitochondrion, where it interacts with Ups1p, antagonizes mitochondrial fission factor Dnm1p, indicative of a role in mitochondrial fusion or regulating morphology; regulates filamentous growth in response to glucose depletion; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000003177]</Hit_def>
  <Hit_accession>YGL209W</Hit_accession>
  <Hit_len>382</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>54.6842</Hsp_bit-score>
      <Hsp_score>130</Hsp_score>
      <Hsp_evalue>2.45755e-08</Hsp_evalue>
      <Hsp_query-from>1339</Hsp_query-from>
      <Hsp_query-to>1497</Hsp_query-to>
      <Hsp_hit-from>19</Hsp_hit-from>
      <Hsp_hit-to>71</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>53</Hsp_align-len>
      <Hsp_qseq>CAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTG</Hsp_qseq>
      <Hsp_hseq>CDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTG</Hsp_hseq>
      <Hsp_midline>C  C + F      KRH   HTGE+P  C F GCGK FS    L+ H+R HTG</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>1.70006e-06</Hsp_evalue>
      <Hsp_query-from>1396</Hsp_query-from>
      <Hsp_query-to>1584</Hsp_query-to>
      <Hsp_hit-from>10</Hsp_hit-from>
      <Hsp_hit-to>70</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>63</Hsp_align-len>
      <Hsp_qseq>VHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHT</Hsp_qseq>
      <Hsp_hseq>VDNENRPFRC--DTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHT</Hsp_hseq>
      <Hsp_midline>V    RPF+C  + C + F    + + H+R HTG++P+ C +  C K F++S  LK H+ THT</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YBR066C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:370037:370699:-1 gene:YBR066C transcript:YBR066C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRG2 description:Transcriptional repressor; mediates glucose repression and negatively regulates filamentous growth; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000000270]</Hit_def>
  <Hit_accession>YBR066C</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>52.373</Hsp_bit-score>
      <Hsp_score>124</Hsp_score>
      <Hsp_evalue>4.8879e-08</Hsp_evalue>
      <Hsp_query-from>1312</Hsp_query-from>
      <Hsp_query-to>1503</Hsp_query-to>
      <Hsp_hit-from>145</Hsp_hit-from>
      <Hsp_hit-to>209</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>65</Hsp_align-len>
      <Hsp_qseq>HTHGPRV-HVCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDR</Hsp_qseq>
      <Hsp_hseq>NTAGQRTRHFCKICSTGFTTSGHLSRHNRIHTGEKNHICPHEGCGQRFSRHDNCNQHYRTHANKK</Hsp_hseq>
      <Hsp_midline>+T G R  H C  C   F  S  L RH  +HTGE+   C  EGCG+RFS   N   H R H   +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YDR043C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:542674:543369:-1 gene:YDR043C transcript:YDR043C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRG1 description:Transcriptional repressor; recruits the Cyc8p-Tup1p complex to promoters; mediates glucose repression and negatively regulates a variety of processes including filamentous growth and alkaline pH response; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000002450]</Hit_def>
  <Hit_accession>YDR043C</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>3.08648e-07</Hsp_evalue>
      <Hsp_query-from>1327</Hsp_query-from>
      <Hsp_query-to>1491</Hsp_query-to>
      <Hsp_hit-from>172</Hsp_hit-from>
      <Hsp_hit-to>226</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>30</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>RVHVCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIH</Hsp_qseq>
      <Hsp_hseq>RKYICKICARGFTTSGHLARHNRIHTGEKNHCCPYKGCTQRFSRHDNCLQHYRTH</Hsp_hseq>
      <Hsp_midline>R ++C  C + F  S  L RH  +HTGE+   C ++GC +RFS   N   H R H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YKL062W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:323228:325120:1 gene:YKL062W transcript:YKL062W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN4 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes, inducing gene expression; involved in diauxic shift [Source:SGD;Acc:S000001545]</Hit_def>
  <Hit_accession>YKL062W</Hit_accession>
  <Hit_len>630</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.6026</Hsp_bit-score>
      <Hsp_score>122</Hsp_score>
      <Hsp_evalue>3.59784e-07</Hsp_evalue>
      <Hsp_query-from>1339</Hsp_query-from>
      <Hsp_query-to>1491</Hsp_query-to>
      <Hsp_hit-from>575</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>CAECGKAFVESSKLKRH-QLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIH</Hsp_qseq>
      <Hsp_hseq>CKDCEKAFRRSEHLKRHIRSVHSTERPFACMF--CEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline>C +C KAF  S  LKRH + VH+ ERPF C F  C K+FS   NL  H++ H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>2.60721e-06</Hsp_evalue>
      <Hsp_query-from>1315</Hsp_query-from>
      <Hsp_query-to>1587</Hsp_query-to>
      <Hsp_hit-from>535</Hsp_hit-from>
      <Hsp_hit-to>626</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>49</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>96</Hsp_align-len>
      <Hsp_qseq>THGPRVHVCAECGKAFVESSKLKRHQLV----HTGERPFQCTFEGCGKRFSLDFNLRTHIR-IHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTK</Hsp_qseq>
      <Hsp_hseq>TLSPTISHNNNNGKVPVQPRKRKSITTIDPNNYDKNKPFKC--KDCEKAFRRSEHLKRHIRSVHSTERPFACMF--CEKKFSRSDNLSQHLKTHKK</Hsp_hseq>
      <Hsp_midline>T  P +      GK  V+  K K    +    +   +PF+C  + C K F    +L+ HIR +H+ +RP+ C +  C KKF++S NL  H+ TH K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YER028C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:210692:211876:-1 gene:YER028C transcript:YER028C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG3 description:Transcriptional regulator; partially nonfunctional in S288C strains but has a major role in catabolite repression and ethanol response in some other strains; involved in response to toxic agents; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p, allowing induction of damage response genesenvironment [Source:SGD;Acc:S000000830]</Hit_def>
  <Hit_accession>YER028C</Hit_accession>
  <Hit_len>394</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.8322</Hsp_bit-score>
      <Hsp_score>120</Hsp_score>
      <Hsp_evalue>5.48398e-07</Hsp_evalue>
      <Hsp_query-from>1339</Hsp_query-from>
      <Hsp_query-to>1494</Hsp_query-to>
      <Hsp_hit-from>19</Hsp_hit-from>
      <Hsp_hit-to>70</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>CAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFSLDFNLRTHIRIHT</Hsp_qseq>
      <Hsp_hseq>CEICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHT</Hsp_hseq>
      <Hsp_midline>C  C + F      KRH   HTGE+P +CT +GC K FS    L+ H+R HT</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.521</Hsp_bit-score>
      <Hsp_score>114</Hsp_score>
      <Hsp_evalue>2.70372e-06</Hsp_evalue>
      <Hsp_query-from>1408</Hsp_query-from>
      <Hsp_query-to>1599</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>75</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>38</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>64</Hsp_align-len>
      <Hsp_qseq>ERPFQCTFEGCGKRFSLDFNLRTHIRIHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTKARKK</Hsp_qseq>
      <Hsp_hseq>QRPFRC--EICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHTKGVQR</Hsp_hseq>
      <Hsp_midline>+RPF+C  E C + F    + + H R HTG++P+ C    C K F++S  LK H+ THTK  ++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YJR127C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:658917:663059:-1 gene:YJR127C transcript:YJR127C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSF2 description:Zinc-finger protein; involved in transcriptional control of both nuclear and mitochondrial genes, many of which specify products required for glycerol-based growth, respiration, and other functions; RSF2 has a paralog, TDA9, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000003888]</Hit_def>
  <Hit_accession>YJR127C</Hit_accession>
  <Hit_len>1380</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>1.41422e-06</Hsp_evalue>
      <Hsp_query-from>1309</Hsp_query-from>
      <Hsp_query-to>1545</Hsp_query-to>
      <Hsp_hit-from>143</Hsp_hit-from>
      <Hsp_hit-to>225</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>42</Hsp_positive>
      <Hsp_gaps>8</Hsp_gaps>
      <Hsp_align-len>85</Hsp_align-len>
      <Hsp_qseq>LHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFS-LDFNLRTHIRIH-----TGDRPYVCPYDSCNKKFA</Hsp_qseq>
      <Hsp_hseq>IKTDKPRPFLCPTCTRGFVRQEHLKRHQHSHTREKPYLCIF--CGRCFARRDLVLRHQQKLHAALVGTGDPRRMTPAPNSTSSFA</Hsp_hseq>
      <Hsp_midline>+ T  PR  +C  C + FV    LKRHQ  HT E+P+ C F  CG+ F+  D  LR   ++H     TGD   + P  +    FA</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>17</Hit_num>
  <Hit_id>YML081W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:104777:108532:1 gene:YML081W transcript:YML081W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDA9 description:Transcription factor that regulates acetate production; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene; TDA9 has a paralog, RSF2, that arose from the whole genome duplication [Source:SGD;Acc:S000004546]</Hit_def>
  <Hit_accession>YML081W</Hit_accession>
  <Hit_len>1251</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>49.6766</Hsp_bit-score>
      <Hsp_score>117</Hsp_score>
      <Hsp_evalue>1.81011e-06</Hsp_evalue>
      <Hsp_query-from>1303</Hsp_query-from>
      <Hsp_query-to>1497</Hsp_query-to>
      <Hsp_hit-from>51</Hsp_hit-from>
      <Hsp_hit-to>114</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>66</Hsp_align-len>
      <Hsp_qseq>KHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGERPFQCTFEGCGKRFS-LDFNLRTHIRIHTG</Hsp_qseq>
      <Hsp_hseq>RTIKTDKPRPFLCHICTRGFVRQEHLKRHQRAHTNEKPFLCVF--CGRCFARRDLVLRHQHKLHSA</Hsp_hseq>
      <Hsp_midline>+ + T  PR  +C  C + FV    LKRHQ  HT E+PF C F  CG+ F+  D  LR   ++H+ </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>18</Hit_num>
  <Hit_id>YMR037C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:344403:346517:-1 gene:YMR037C transcript:YMR037C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN2 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; relative distribution to nucleus increases upon DNA replication stress [Source:SGD;Acc:S000004640]</Hit_def>
  <Hit_accession>YMR037C</Hit_accession>
  <Hit_len>704</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>5.25673e-06</Hsp_evalue>
      <Hsp_query-from>1408</Hsp_query-from>
      <Hsp_query-to>1587</Hsp_query-to>
      <Hsp_hit-from>644</Hsp_hit-from>
      <Hsp_hit-to>700</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>61</Hsp_align-len>
      <Hsp_qseq>ERPFQCTFEGCGKRFSLDFNLRTHIR-IHTGDRPYVCPYDSCNKKFAQSTNLKSHILTHTK</Hsp_qseq>
      <Hsp_hseq>EKPFHCHI--CPKSFKRSEHLKRHVRSVHSNERPFACHI--CDKKFSRSDNLSQHIKTHKK</Hsp_hseq>
      <Hsp_midline>E+PF C    C K F    +L+ H+R +H+ +RP+ C    C+KKF++S NL  HI TH K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>97</Statistics_hsp-len>
      <Statistics_eff-space>1559872762</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>18</Iteration_iter-num>
  <Iteration_query-ID>Query_18</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055145-RA transcript Note:&quot;Similar to Rnf8 E3 ubiquitin-protein ligase RNF8 (Rattus norvegicus)&quot; offset:23 AED:0.29 eAED:0.36 QI:23|0.5|0.8|1|1|1|5|0|470</Iteration_query-def>
  <Iteration_query-len>1436</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>93</Statistics_hsp-len>
      <Statistics_eff-space>885602795</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>19</Iteration_iter-num>
  <Iteration_query-ID>Query_19</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055146-RA transcript Note:&quot;Similar to DEGS1 Sphingolipid delta(4)-desaturase DES1 (Bos taurus)&quot; offset:0 AED:0.42 eAED:0.42 QI:0|0|0|1|1|1|2|0|262</Iteration_query-def>
  <Iteration_query-len>789</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>88</Statistics_hsp-len>
      <Statistics_eff-space>408321725</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>20</Iteration_iter-num>
  <Iteration_query-ID>Query_20</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055147-RA transcript Note:&quot;Similar to Vegfa Vascular endothelial growth factor A (Rattus norvegicus)&quot; offset:0 AED:0.70 eAED:0.79 QI:0|0|0|0.5|1|1|4|0|119</Iteration_query-def>
  <Iteration_query-len>360</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>78</Statistics_hsp-len>
      <Statistics_eff-space>100769214</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>

