<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
  <BlastOutput_program>blastx</BlastOutput_program>
  <BlastOutput_version>BLASTX 2.10.0+</BlastOutput_version>
  <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
  <BlastOutput_db>/home/smr/dbs/ensembl/release-100/Saccharomyces_cerevisiae.R64-1-1.pep.all.fa</BlastOutput_db>
  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
  <BlastOutput_query-def>PMZ_0060962-RA transcript Note:&quot;Similar to LMBR1 Limb region 1 protein homolog (Homo sapiens)&quot; offset:247 AED:0.07 eAED:0.07 QI:247|0.75|0.84|1|0.58|0.61|13|2424|316</BlastOutput_query-def>
  <BlastOutput_query-len>3622</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_matrix>BLOSUM62</Parameters_matrix>
      <Parameters_expect>1e-05</Parameters_expect>
      <Parameters_gap-open>11</Parameters_gap-open>
      <Parameters_gap-extend>1</Parameters_gap-extend>
      <Parameters_filter>L;</Parameters_filter>
    </Parameters>
  </BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
  <Iteration_iter-num>1</Iteration_iter-num>
  <Iteration_query-ID>Query_1</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060962-RA transcript Note:&quot;Similar to LMBR1 Limb region 1 protein homolog (Homo sapiens)&quot; offset:247 AED:0.07 eAED:0.07 QI:247|0.75|0.84|1|0.58|0.61|13|2424|316</Iteration_query-def>
  <Iteration_query-len>3622</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>101</Statistics_hsp-len>
      <Statistics_eff-space>2485698502</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>2</Iteration_iter-num>
  <Iteration_query-ID>Query_2</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060964-RA transcript Note:&quot;Similar to DDX18 ATP-dependent RNA helicase DDX18 (Homo sapiens)&quot; offset:0 AED:0.25 eAED:0.28 QI:0|0.6|0.54|1|1|1|11|500|508</Iteration_query-def>
  <Iteration_query-len>2027</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YMR290C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:850074:851591:-1 gene:YMR290C transcript:YMR290C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HAS1 description:ATP-dependent RNA helicase; involved in the biogenesis of 40S and 60S ribosome subunits; localizes to both the nuclear periphery and nucleolus; highly enriched in nuclear pore complex fractions; constituent of 66S pre-ribosomal particles [Source:SGD;Acc:S000004903]</Hit_def>
  <Hit_accession>YMR290C</Hit_accession>
  <Hit_len>505</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>327.791</Hsp_bit-score>
      <Hsp_score>839</Hsp_score>
      <Hsp_evalue>2.74946e-105</Hsp_evalue>
      <Hsp_query-from>310</Hsp_query-from>
      <Hsp_query-to>1122</Hsp_query-to>
      <Hsp_hit-from>49</Hsp_hit-from>
      <Hsp_hit-to>348</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>184</Hsp_identity>
      <Hsp_positive>238</Hsp_positive>
      <Hsp_gaps>29</Hsp_gaps>
      <Hsp_align-len>300</Hsp_align-len>
      <Hsp_qseq>VSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHMQ-----------CLVIDEADRILEVGFEEEIKQIIRLLPKK-RQTMLFSATQTRKIEDLAKISLKKEPLY-----------------GYVVCPSEXXXXXXXXXXXXXXXXXIMVFFSSCMSVKFHYELFNYIDLPVMGIHGXXXXXXXXXXXXXXCNADSGTLLCTDM</Hsp_qseq>
      <Hsp_hseq>LSQPTLKAIEKMGFTTMTSVQARTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIELLHSLKFKPRNGTGIIVITPTRELALQIFGVARELMEFHSQTFGIVIGGANRRQEAEKLMKGVNMLIATPGRLLDHLQNTKGFVFKNLKALIIDEADRILEIGFEDEMRQIIKILPNEDRQSMLFSATQTTKVEDLARISLRPGPLFINVVPETDNSTADGLEQGYVVCDSDKRFLLLFSFLKRNQKKKIIVFLSSCNSVKYYAELLNYIDLPVLELHGKQKQQKRTNTFFEFCNAERGILICTDV</Hsp_hseq>
      <Hsp_midline>+S+ TLKA+ +MGF TMT +Q ++I PLL GRD+L AA+TGSGKTLAFLIPAIEL+H +KF PRNGTG++V++PTRELA+Q +GV RELM+ H  T+G+++GG+NR  EA+KL KG+N+L+ATPGRLLDH+Q            L+IDEADRILE+GFE+E++QII++LP + RQ+MLFSATQT K+EDLA+ISL+  PL+                 GYVVC S+KRFLLLF+FLK+N+KKKI+VF SSC SVK++ EL NYIDLPV+ +HGKQKQ KRT TFF+FCNA+ G L+CTD+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>80.1073</Hsp_bit-score>
      <Hsp_score>196</Hsp_score>
      <Hsp_evalue>2.71177e-16</Hsp_evalue>
      <Hsp_query-from>1114</Hsp_query-from>
      <Hsp_query-to>1311</Hsp_query-to>
      <Hsp_hit-from>427</Hsp_hit-from>
      <Hsp_hit-to>492</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>33</Hsp_identity>
      <Hsp_positive>51</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>66</Hsp_align-len>
      <Hsp_qseq>TDMEKLIEKNYYLHKSAQEAYKAYVRAYDSHSLKQIYNVSTLDLQKAALSFGFRVPPFVDLNVHSS</Hsp_qseq>
      <Hsp_hseq>SQLEKLIKSNYYLHQTAKDGYRSYLQAYASHSLKTVYQIDKLDLAKVAKSYGFPVPPKVNITIGAS</Hsp_hseq>
      <Hsp_midline>+ +EKLI+ NYYLH++A++ Y++Y++AY SHSLK +Y +  LDL K A S+GF VPP V++ + +S</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YJL033W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:383837:386149:1 gene:YJL033W transcript:YJL033W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HCA4 description:DEAD box RNA helicase; component of the SSU; interacts with Bfr2p and Enp2p; high-copy number suppression of a U14 snoRNA processing mutant suggests an involvement in 18S rRNA synthesis [Source:SGD;Acc:S000003570]</Hit_def>
  <Hit_accession>YJL033W</Hit_accession>
  <Hit_len>770</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>182.185</Hsp_bit-score>
      <Hsp_score>461</Hsp_score>
      <Hsp_evalue>3.72152e-49</Hsp_evalue>
      <Hsp_query-from>310</Hsp_query-from>
      <Hsp_query-to>1122</Hsp_query-to>
      <Hsp_hit-from>48</Hsp_hit-from>
      <Hsp_hit-to>352</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>123</Hsp_identity>
      <Hsp_positive>180</Hsp_positive>
      <Hsp_gaps>36</Hsp_gaps>
      <Hsp_align-len>306</Hsp_align-len>
      <Hsp_qseq>VSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDH-----------MQCLVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSATQTRKIEDLAKISLKKEPLYG----------------------YVVCPSEXXXXXXXXXXXXXXXXXIMVFFSSCMSVKFHYELFNYID--LPVMGIHGXXXXXXXXXXXXXXCNADSGTLLCTDM</Hsp_qseq>
      <Hsp_hseq>ISDPTLKGLRESSFIKLTEIQADSIPVSLQGHDVLAAAKTGSGKTLAFLVPVIEKLYREKWTEFDGLGALIISPTRELAMQIYEVLTKIGSHTSFSAGLVIGGKDVKFELERISR-INILIGTPGRILQHLDQAVGLNTSNLQMLVLDEADRCLDMGFKKTLDAIVSTLSPSRQTLLFSATQSQSVADLARLSLTDYKTVGTHDVMDGSVNKEASTPETLQQFYIEVPLADKLDILFSFIKSHLKCKMIVFLSSSKQVHFVYETFRKMQPGISLMHLHGRQKQRARTETLDKFNRAQQVCLFATDV</Hsp_hseq>
      <Hsp_midline>+S+ TLK + E  F  +TEIQ  SI   L+G D+LAAA+TGSGKTLAFL+P IE +++ K+   +G G L++SPTRELAMQ Y VL ++  H   + GL++GG +   E +++++ INIL+ TPGR+L H           +Q LV+DEADR L++GF++ +  I+  L   RQT+LFSATQ++ + DLA++SL      G                      Y+  P   +  +LF+F+K + K K++VF SS   V F YE F  +   + +M +HG+QKQ  RT T  +F  A    L  TD+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YLL008W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:131729:133987:1 gene:YLL008W transcript:YLL008W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DRS1 description:Nucleolar DEAD-box protein required for ribosome assembly and function; including synthesis of 60S ribosomal subunits; constituent of 66S pre-ribosomal particles [Source:SGD;Acc:S000003931]</Hit_def>
  <Hit_accession>YLL008W</Hit_accession>
  <Hit_len>752</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>145.976</Hsp_bit-score>
      <Hsp_score>367</Hsp_score>
      <Hsp_evalue>5.13014e-37</Hsp_evalue>
      <Hsp_query-from>286</Hsp_query-from>
      <Hsp_query-to>864</Hsp_query-to>
      <Hsp_hit-from>232</Hsp_hit-from>
      <Hsp_hit-to>433</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>89</Hsp_identity>
      <Hsp_positive>129</Hsp_positive>
      <Hsp_gaps>17</Hsp_gaps>
      <Hsp_align-len>206</Hsp_align-len>
      <Hsp_qseq>SFSSLAELVSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIE-LIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVH-TYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHM-----------QCLVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSATQTRKIEDLAKISLKK</Hsp_qseq>
      <Hsp_hseq>NFNSLS--LSRPVLKGLASLGYVKPSPIQSATIPIALLGKDIIAGAVTGSGKTAAFMIPIIERLLYKPAKIA--STRVIVLLPTRELAIQVADVGKQIARFVSGITFGLAVGGLNLRQQEQMLKSRPDIVIATPGRFIDHIRNSASFNVDSVEILVMDEADRMLEEGFQDELNEIMGLLPSNRQNLLFSATMNSKIKSLVSLSLKK</Hsp_hseq>
      <Hsp_midline>+F+SL+  +S   LK +A +G+   + IQ  +I   L G+DI+A A TGSGKT AF+IP IE L++K   +    T V+VL PTRELA+Q   V +++ +     T+GL +GG N   + Q L    +I++ATPGR +DH+           + LV+DEADR+LE GF++E+ +I+ LLP  RQ +LFSAT   KI+ L  +SLKK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YDL031W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:394217:397204:1 gene:YDL031W transcript:YDL031W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP10 description:Putative ATP-dependent RNA helicase of the DEAD-box protein family; constituent of 66S pre-ribosomal particles; essential protein involved in ribosome biogenesis [Source:SGD;Acc:S000002189]</Hit_def>
  <Hit_accession>YDL031W</Hit_accession>
  <Hit_len>995</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>132.109</Hsp_bit-score>
      <Hsp_score>331</Hsp_score>
      <Hsp_evalue>2.35977e-32</Hsp_evalue>
      <Hsp_query-from>172</Hsp_query-from>
      <Hsp_query-to>858</Hsp_query-to>
      <Hsp_hit-from>99</Hsp_hit-from>
      <Hsp_hit-to>334</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>84</Hsp_identity>
      <Hsp_positive>129</Hsp_positive>
      <Hsp_gaps>27</Hsp_gaps>
      <Hsp_align-len>246</Hsp_align-len>
      <Hsp_qseq>EQTDDEKRSGEGTDGETKDSDDDGPALPIGTTGAFEDM-----SFSSLAELVSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELI--HKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLL----------DHMQCLVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSATQTRKIEDLAKISL</Hsp_qseq>
      <Hsp_hseq>EMSDDENNAS----GKTQTGDDEDDVNEYFSTNNLEKTKHKKGSFPSFG--LSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVEKLKSHSGKI----GARAVILSPSRELAMQTFNVFKDFARGTELRSVLLTGGDSLEEQFGMMMTNPDVIIATPGRFLHLKVEMNLDLKSVEYVVFDEADRLFEMGFQEQLNELLASLPTTRQTLLFSATLPNSLVDFVKAGL</Hsp_hseq>
      <Hsp_midline>E +DDE  +     G+T+  DD+       +T   E       SF S    +S+  L  +   GF   T IQ K+I  +L+ RDI+  ARTGSGKT AF++P +E +  H  K     G   ++LSP+RELAMQT+ V ++  +       L+ GG +   +   +    ++++ATPGR L            ++ +V DEADR+ E+GF+E++ +++  LP  RQT+LFSAT    + D  K  L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YHR065C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VIII:227532:229037:-1 gene:YHR065C transcript:YHR065C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RRP3 description:Protein involved in rRNA processing; required for maturation of the 35S primary transcript of pre-rRNA and for cleavage leading to mature 18S rRNA; homologous to eIF-4a, which is a DEAD box RNA-dependent ATPase with helicase activity [Source:SGD;Acc:S000001107]</Hit_def>
  <Hit_accession>YHR065C</Hit_accession>
  <Hit_len>501</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>122.865</Hsp_bit-score>
      <Hsp_score>307</Hsp_score>
      <Hsp_evalue>4.40602e-30</Hsp_evalue>
      <Hsp_query-from>163</Hsp_query-from>
      <Hsp_query-to>858</Hsp_query-to>
      <Hsp_hit-from>29</Hsp_hit-from>
      <Hsp_hit-to>278</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>92</Hsp_identity>
      <Hsp_positive>140</Hsp_positive>
      <Hsp_gaps>42</Hsp_gaps>
      <Hsp_align-len>262</Hsp_align-len>
      <Hsp_qseq>ENQEQTDDEKRSGEGTDGETKDSDDDGPA-------------LPIGTTGAFEDMSFSSLAEL--VSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQ---TYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHMQ-----------CLVIDEADRILEVGFEEEIKQIIRLLP-KKRQTMLFSATQTRKIEDLAKISL</Hsp_qseq>
      <Hsp_hseq>ENQKKLIEAEKEG----GSESDSEEDATAEKKKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPEL-IQACKNLNYSKPTPIQSKAIPPALEGHDIIGLAQTGSGKTAAFAIPILNRL----WHDQEPYYACILAPTRELAQQIKETFDSLGSLMGVRSTC---IVGGMNMMDQARDLMRKPHIIIATPGRLMDHLENTKGFSLRKLKFLVMDEADRLLDMEFGPVLDRILKIIPTQERTTYLFSATMTSKIDKLQRASL</Hsp_hseq>
      <Hsp_midline>ENQ++  + ++ G    G   DS++D  A             +        ED SF S +EL  V E  ++A   + ++  T IQ K+I P LEG DI+  A+TGSGKT AF IP +  +    +  +      +L+PTRELA Q   T+  L  LM         I+GG N   +A+ L +  +I++ATPGRL+DH++            LV+DEADR+L++ F   + +I++++P ++R T LFSAT T KI+ L + SL</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YDR194C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:845952:847946:-1 gene:YDR194C transcript:YDR194C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSS116 description:Mitochondrial transcription elongation factor; DEAD-box protein; required for efficient splicing of mitochondrial Group I and II introns; non-polar RNA helicase that also facilities strand annealing; promotes RNA folding by stabilizing an early assembly intermediate [Source:SGD;Acc:S000002602]</Hit_def>
  <Hit_accession>YDR194C</Hit_accession>
  <Hit_len>664</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>124.02</Hsp_bit-score>
      <Hsp_score>310</Hsp_score>
      <Hsp_evalue>4.84329e-30</Hsp_evalue>
      <Hsp_query-from>328</Hsp_query-from>
      <Hsp_query-to>1122</Hsp_query-to>
      <Hsp_hit-from>119</Hsp_hit-from>
      <Hsp_hit-to>435</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>104</Hsp_identity>
      <Hsp_positive>162</Hsp_positive>
      <Hsp_gaps>58</Hsp_gaps>
      <Hsp_align-len>320</Hsp_align-len>
      <Hsp_qseq>KAVAEMGFATMTEIQHKSIRPLL--EGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGL-------IMGGSNRTAEAQKLAK-GINILVATPGRLLDHMQCL-----------VIDEADRILEVGFEEEIKQIIRLLPKKR-------QTMLFSATQTRKIEDLA-KISLKKEPLYGYVVCPSEXXXXXXXXXXXXXXXXXIMVFFSSCM--------------------SVKFHYELFNYI------DLPVMGIHGXXXXXXXXXXXXXXCNADSGTLLCTDM</Hsp_qseq>
      <Hsp_hseq>KAITRMEFPGLTPVQQKTIKPILSSEDHDVIARAKTGTGKTFAFLIPIFQHLINTKFDSQYMVKAVIVAPTRDLALQIEA---EVKKIHDMNYGLKKYACVSLVGGTDFRAAMNKMNKLRPNIVIATPGRLIDVLEKYSNKFFRFVDYKVLDEADRLLEIGFRDDLETISGILNEKNSKSADNIKTLLFSATLDDKVQKLANNIMNKKECLFLDTVDKNEPEAHERIDQSVVISEKFANSIFAAVEHIKKQIKERDSNYKAIIFAPTVKFTSFLCSILKNEFKKDLPILEFHGKITQNKRTSLVKRFKKDESGILVCTDV</Hsp_hseq>
      <Hsp_midline>KA+  M F  +T +Q K+I+P+L  E  D++A A+TG+GKT AFLIP  + +   KF  +     ++++PTR+LA+Q      E+ K H   YGL       ++GG++  A   K+ K   NI++ATPGRL+D ++             V+DEADR+LE+GF ++++ I  +L +K        +T+LFSAT   K++ LA  I  KKE L+   V  +E              +K     F++                      +VKF   L + +      DLP++  HGK  Q KRT+   +F   +SG L+CTD+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YNL112W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:413639:416281:1 gene:YNL112W transcript:YNL112W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP2 description:ATP-dependent RNA helicase of the DEAD-box protein family; has strong preference for dsRNA; interacts with YRA1; required for assembly of Yra1p, Nab2p and Mex67p onto mRNA and formation of nuclear mRNP; involved in mRNA decay and rRNA processing; may be involved in suppression of transcription from cryptic initiation sites [Source:SGD;Acc:S000005056]</Hit_def>
  <Hit_accession>YNL112W</Hit_accession>
  <Hit_len>546</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>121.324</Hsp_bit-score>
      <Hsp_score>303</Hsp_score>
      <Hsp_evalue>2.11866e-29</Hsp_evalue>
      <Hsp_query-from>316</Hsp_query-from>
      <Hsp_query-to>846</Hsp_query-to>
      <Hsp_hit-from>122</Hsp_hit-from>
      <Hsp_hit-to>309</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>69</Hsp_identity>
      <Hsp_positive>110</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>188</Hsp_align-len>
      <Hsp_qseq>EYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFM-PRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHMQC----------LVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSATQTRKIEDLA</Hsp_qseq>
      <Hsp_hseq>DYVLNEVKAEGFDKPTGIQCQGWPMALSGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGDGPIVLVLAPTRELAVQIQTECSKFGHSSRIRNTCVYGGVPKSQQIRDLSRGSEIVIATPGRLIDMLEIGKTNLKRVTYLVLDEADRMLDMGFEPQIRKIVDQIRPDRQTLMWSATWPKEVKQLA</Hsp_hseq>
      <Hsp_midline>+Y L  V   GF   T IQ +     L GRD++  A TGSGKTL++ +P I  I+    + P +G  VLVL+PTRELA+Q      +           + GG  ++ + + L++G  I++ATPGRL+D ++           LV+DEADR+L++GFE +I++I+  +   RQT+++SAT  ++++ LA</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YGL078C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:360288:361859:-1 gene:YGL078C transcript:YGL078C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP3 description:RNA-Dependent ATPase, member of DExD/H-box family; involved in cleavage of site A3 within the ITS1 spacer during rRNA processing; not essential for growth, but deletion causes severe slow-growth phenotype [Source:SGD;Acc:S000003046]</Hit_def>
  <Hit_accession>YGL078C</Hit_accession>
  <Hit_len>523</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>120.168</Hsp_bit-score>
      <Hsp_score>300</Hsp_score>
      <Hsp_evalue>3.84454e-29</Hsp_evalue>
      <Hsp_query-from>349</Hsp_query-from>
      <Hsp_query-to>846</Hsp_query-to>
      <Hsp_hit-from>132</Hsp_hit-from>
      <Hsp_hit-to>305</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>77</Hsp_identity>
      <Hsp_positive>102</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>177</Hsp_align-len>
      <Hsp_qseq>FATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHMQ----------CLVIDEADRILEVGFEEEIKQIIRLL-PKKRQTMLFSATQTRKIEDLA</Hsp_qseq>
      <Hsp_hseq>FPKPTPIQAVAWPYLLSGKDVVGVAETGSGKTFAFGVPAIS--HLMNDQKKRGIQVLVISPTRELASQIYDNLIVLTDKVGMQCCCVYGGVPKDEQRIQLKKS-QVVVATPGRLLDLLQEGSVDLSQVNYLVLDEADRMLEKGFEEDIKNIIRETDASKRQTLMFTATWPKEVRELA</Hsp_hseq>
      <Hsp_midline>F   T IQ  +   LL G+D++  A TGSGKT AF +PAI   H +    + G  VLV+SPTRELA Q Y  L  L          + GG  +  +  +L K   ++VATPGRLLD +Q           LV+DEADR+LE GFEE+IK IIR     KRQT++F+AT  +++ +LA</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YDL160C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:170410:171930:-1 gene:YDL160C transcript:YDL160C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DHH1 description:Cytoplasmic DEAD-box helicase, stimulates mRNA decapping; coordinates distinct steps in mRNA function and decay, interacting with both decapping and deadenylase complexes; role in translational repression, mRNA decay, and possibly mRNA export; interacts and cooperates with Ngr1p to promote specific mRNA decay; ATP- and RNA-bound form promotes processing body (PB) assembly, while ATPase stimulation by Not1p promotes PB disassembly; forms cytoplasmic foci on replication stress [Source:SGD;Acc:S000002319]</Hit_def>
  <Hit_accession>YDL160C</Hit_accession>
  <Hit_len>506</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>117.087</Hsp_bit-score>
      <Hsp_score>292</Hsp_score>
      <Hsp_evalue>3.82369e-28</Hsp_evalue>
      <Hsp_query-from>325</Hsp_query-from>
      <Hsp_query-to>819</Hsp_query-to>
      <Hsp_hit-from>58</Hsp_hit-from>
      <Hsp_hit-to>228</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>70</Hsp_identity>
      <Hsp_positive>102</Hsp_positive>
      <Hsp_gaps>16</Hsp_gaps>
      <Hsp_align-len>176</Hsp_align-len>
      <Hsp_qseq>LKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPR-NGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLD----------HMQCLVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSAT</Hsp_qseq>
      <Hsp_hseq>LMGIFEAGFEKPSPIQEEAIPVAITGRDILARAKNGTGKTAAFVIPTLE-----KVKPKLNKIQALIMVPTRELALQTSQVVRTLGKHCGISCMVTTGGTNLRDDILRLNETVHILVGTPGRVLDLASRKVADLSDCSLFIMDEADKMLSRDFKTIIEQILSFLPPTHQSLLFSAT</Hsp_hseq>
      <Hsp_midline>L  + E GF   + IQ ++I   + GRDILA A+ G+GKT AF+IP +E     K  P+ N    L++ PTRELA+QT  V+R L KH   +  +  GG+N   +  +L + ++ILV TPGR+LD               ++DEAD++L   F+  I+QI+  LP   Q++LFSAT</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YFL002C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:145114:146934:-1 gene:YFL002C transcript:YFL002C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SPB4 description:Putative ATP-dependent RNA helicase; nucleolar protein required for synthesis of 60S ribosomal subunits at a late step in the pathway; sediments with 66S pre-ribosomes in sucrose gradients [Source:SGD;Acc:S000001894]</Hit_def>
  <Hit_accession>YFL002C</Hit_accession>
  <Hit_len>606</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>114.005</Hsp_bit-score>
      <Hsp_score>284</Hsp_score>
      <Hsp_evalue>6.9948e-27</Hsp_evalue>
      <Hsp_query-from>343</Hsp_query-from>
      <Hsp_query-to>1116</Hsp_query-to>
      <Hsp_hit-from>25</Hsp_hit-from>
      <Hsp_hit-to>326</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>101</Hsp_identity>
      <Hsp_positive>158</Hsp_positive>
      <Hsp_gaps>50</Hsp_gaps>
      <Hsp_align-len>305</Hsp_align-len>
      <Hsp_qseq>MGFATMTEIQHKSIRPLLEG-RDILAAARTGSGKTLAFLIPAIELIHK-----IKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTY-----GLIMGGSNRTAE---AQKLAKGINILVATPGRLLDHMQ--------C--LVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSATQTRKIEDLAKISLKKE---------------PLYGYVVCPSEXXXXXXXXXXXXXXXXXIMVFFSSCMSVKFHYELFNYI--------DLPVMGIHGXXXXXXXXXXXXXXCNADSGTLLCT</Hsp_qseq>
      <Hsp_hseq>MGFETMTPVQASTI-PMLAGNKDVVVDSVTGSGKTAAFVIPVLEKVVKEEANTSKFKKAHFHS-LIIAPTRELSRQIESVVLSFLEHYPSDLFPIKCQLLVGTNEATVRDDVSNFLRNRPQILIGTPGRVLDFLQMPAVKTSACSMVVMDEADRLLDMSFIKDTEKILRLLPKQRRTGLFSATMRSAGSDIFKTGLRNPVRITVNSKNQAPSSLKLNYCVVNPAEKLQLLVSILNNYKFKKCI-VYFPTCVSVSYFYSFIQYLGKRNILVNEVEIFSLHGKLQTSARTKTLTAFTDSLSNSVLFT</Hsp_hseq>
      <Hsp_midline>MGF TMT +Q  +I P+L G +D++  + TGSGKT AF+IP +E + K      KF   +    L+++PTREL+ Q   V+   ++H+          L++G +  T     +  L     IL+ TPGR+LD +Q        C  +V+DEADR+L++ F ++ ++I+RLLPK+R+T LFSAT      D+ K  L+                  L   VV P+EK  LL+        KK I V+F +C+SV + Y    Y+        ++ +  +HGK + + RT T   F ++ S ++L T</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YKR059W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:554987:556174:1 gene:YKR059W transcript:YKR059W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIF1 description:Translation initiation factor eIF4A; DEA(D/H)-box RNA helicase that couples ATPase activity to RNA binding and unwinding; forms a dumbbell structure of two compact domains connected by a linker; interacts with eIF4G; protein abundance increases in response to DNA replication stress; TIF1 has a paralog, TIF2, that arose from the whole genome duplication [Source:SGD;Acc:S000001767]</Hit_def>
  <Hit_accession>YKR059W</Hit_accession>
  <Hit_len>395</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>108.997</Hsp_bit-score>
      <Hsp_score>271</Hsp_score>
      <Hsp_evalue>5.35421e-26</Hsp_evalue>
      <Hsp_query-from>274</Hsp_query-from>
      <Hsp_query-to>873</Hsp_query-to>
      <Hsp_hit-from>24</Hsp_hit-from>
      <Hsp_hit-to>229</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>75</Hsp_identity>
      <Hsp_positive>116</Hsp_positive>
      <Hsp_gaps>30</Hsp_gaps>
      <Hsp_align-len>218</Hsp_align-len>
      <Hsp_qseq>FEDMSFSSLAELVSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHMQ----------CLVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSATQ--------TRKIEDLAKISLKKEPL</Hsp_qseq>
      <Hsp_hseq>FDDME-------LDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQ----ALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-RDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDEL</Hsp_hseq>
      <Hsp_midline>F+DM        + E  L+ V   GF   + IQ ++I P++EG D+LA A++G+GKT  F I A++ I      P+     L+L+PTRELA+Q   V+  L  H        +GG++   +A+ L +   I+V TPGR+ D++Q            ++DEAD +L  GF+E+I QI  LLP   Q +L SAT         T+ + +  +I +KK+ L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YJL138C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:153504:154691:-1 gene:YJL138C transcript:YJL138C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TIF2 description:Translation initiation factor eIF4A; DEA(D/H)-box RNA helicase that couples ATPase activity to RNA binding and unwinding; forms a dumbbell structure of two compact domains connected by a linker; interacts with eIF4G; protein abundance increases in response to DNA replication stress; TIF2 has a paralog, TIF1, that arose from the whole genome duplication [Source:SGD;Acc:S000003674]</Hit_def>
  <Hit_accession>YJL138C</Hit_accession>
  <Hit_len>395</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>108.997</Hsp_bit-score>
      <Hsp_score>271</Hsp_score>
      <Hsp_evalue>5.35421e-26</Hsp_evalue>
      <Hsp_query-from>274</Hsp_query-from>
      <Hsp_query-to>873</Hsp_query-to>
      <Hsp_hit-from>24</Hsp_hit-from>
      <Hsp_hit-to>229</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>75</Hsp_identity>
      <Hsp_positive>116</Hsp_positive>
      <Hsp_gaps>30</Hsp_gaps>
      <Hsp_align-len>218</Hsp_align-len>
      <Hsp_qseq>FEDMSFSSLAELVSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHMQ----------CLVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSATQ--------TRKIEDLAKISLKKEPL</Hsp_qseq>
      <Hsp_hseq>FDDME-------LDENLLRGVFGYGFEEPSAIQQRAIMPIIEGHDVLAQAQSGTGKTGTFSIAALQRIDTSVKAPQ----ALMLAPTRELALQIQKVVMALAFHMDIKVHACIGGTSFVEDAEGL-RDAQIVVGTPGRVFDNIQRRRFRTDKIKMFILDEADEMLSSGFKEQIYQIFTLLPPTTQVVLLSATMPNDVLEVTTKFMRNPVRILVKKDEL</Hsp_hseq>
      <Hsp_midline>F+DM        + E  L+ V   GF   + IQ ++I P++EG D+LA A++G+GKT  F I A++ I      P+     L+L+PTRELA+Q   V+  L  H        +GG++   +A+ L +   I+V TPGR+ D++Q            ++DEAD +L  GF+E+I QI  LLP   Q +L SAT         T+ + +  +I +KK+ L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YBR237W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:691969:694518:1 gene:YBR237W transcript:YBR237W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PRP5 description:RNA helicase in the DEAD-box family; necessary for prespliceosome formation, bridges U1 and U2 snRNPs and enables stable U2 snRNP association with intron RNA [Source:SGD;Acc:S000000441]</Hit_def>
  <Hit_accession>YBR237W</Hit_accession>
  <Hit_len>849</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>109.383</Hsp_bit-score>
      <Hsp_score>272</Hsp_score>
      <Hsp_evalue>3.19631e-25</Hsp_evalue>
      <Hsp_query-from>250</Hsp_query-from>
      <Hsp_query-to>846</Hsp_query-to>
      <Hsp_hit-from>243</Hsp_hit-from>
      <Hsp_hit-to>457</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>64</Hsp_identity>
      <Hsp_positive>119</Hsp_positive>
      <Hsp_gaps>16</Hsp_gaps>
      <Hsp_align-len>215</Hsp_align-len>
      <Hsp_qseq>LPIGTTGAFEDMSFSSLAELVSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGV--LVLSPTRELAMQTYGVLRELMKHHVHTYGL-IMGGSNRTAEAQKLAKGINILVATPGRLLD-------------HMQCLVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSATQTRKIEDLA</Hsp_qseq>
      <Hsp_hseq>IKIKGTGCPKPVTKWSQLGLSTDTMVLITEKLHFGSLTPIQSQALPAIMSGRDVIGISKTGSGKTISYLLPLLRQVKAQRPLSKHETGPMGLILAPTRELALQIHEEVTKFTEADTSIRSVCCTGGSEMKKQITDLKRGTEIVVATPGRFIDILTLNDGKLLSTKRITFVVMDEADRLFDLGFEPQITQIMKTVRPDKQCVLFSATFPNKLRSFA</Hsp_hseq>
      <Hsp_midline>+ I  TG  + ++  S   L ++  +    ++ F ++T IQ +++  ++ GRD++  ++TGSGKT+++L+P +  +   + + ++ TG   L+L+PTRELA+Q +  + +  +       +   GGS    +   L +G  I+VATPGR +D              +  +V+DEADR+ ++GFE +I QI++ +   +Q +LFSAT   K+   A</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YPL119C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:324411:326264:-1 gene:YPL119C transcript:YPL119C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP1 description:Putative ATP-dependent RNA helicase of the DEAD-box protein family; mutants show reduced stability of the 40S ribosomal subunit scanning through 5&apos; untranslated regions of mRNAs; protein abundance increases in response to DNA replication stress; DBP1 has a paralog, DED1, that arose from the whole genome duplication [Source:SGD;Acc:S000006040]</Hit_def>
  <Hit_accession>YPL119C</Hit_accession>
  <Hit_len>617</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>107.457</Hsp_bit-score>
      <Hsp_score>267</Hsp_score>
      <Hsp_evalue>8.1855e-25</Hsp_evalue>
      <Hsp_query-from>280</Hsp_query-from>
      <Hsp_query-to>849</Hsp_query-to>
      <Hsp_hit-from>155</Hsp_hit-from>
      <Hsp_hit-to>365</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>74</Hsp_identity>
      <Hsp_positive>115</Hsp_positive>
      <Hsp_gaps>29</Hsp_gaps>
      <Hsp_align-len>215</Hsp_align-len>
      <Hsp_qseq>DMSFSSLAELVSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKI----------KFMPRNG-TGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLD----------HMQCLVIDEADRILEVGFEEEIKQIIRL--LP--KKRQTMLFSATQTRKIEDLAK</Hsp_qseq>
      <Hsp_hseq>DFSSPPLDELL----MENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFLFPLFTELFRSGPSPVPEKAQSFYSRKGYPSALVLAPTRELATQIFEEARKFTYRSWVRPCVVYGGAPIGNQMREVDRGCDLLVATPGRLNDLLERGKVSLANIKYLVLDEADRMLDMGFEPQIRHIVEECDMPSVENRQTLMFSATFPVDIQHLAR</Hsp_hseq>
      <Hsp_midline>D S   L EL+    ++ +    F   T +Q  SI  + +GRD++A A+TGSGKT  FL P    + +            F  R G    LVL+PTRELA Q +   R+          ++ GG+    + +++ +G ++LVATPGRL D          +++ LV+DEADR+L++GFE +I+ I+    +P  + RQT++FSAT    I+ LA+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YHR169W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VIII:442181:443476:1 gene:YHR169W transcript:YHR169W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP8 description:ATPase, putative RNA helicase of the DEAD-box family; component of 90S preribosome complex involved in production of 18S rRNA and assembly of 40S small ribosomal subunit; ATPase activity stimulated by association with Esf2p [Source:SGD;Acc:S000001212]</Hit_def>
  <Hit_accession>YHR169W</Hit_accession>
  <Hit_len>431</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>103.99</Hsp_bit-score>
      <Hsp_score>258</Hsp_score>
      <Hsp_evalue>3.06909e-24</Hsp_evalue>
      <Hsp_query-from>289</Hsp_query-from>
      <Hsp_query-to>888</Hsp_query-to>
      <Hsp_hit-from>4</Hsp_hit-from>
      <Hsp_hit-to>215</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>78</Hsp_identity>
      <Hsp_positive>111</Hsp_positive>
      <Hsp_gaps>24</Hsp_gaps>
      <Hsp_align-len>218</Hsp_align-len>
      <Hsp_qseq>FSSLAELVSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHMQC--------------LVIDEADRILEVGFEEEIKQIIRLLP--KKRQTMLFSATQTRKIEDL--AKISLKKEPLYGYVV</Hsp_qseq>
      <Hsp_hseq>FKSLG--LSKWLTESLRAMKITQPTAIQKACIPKILEGRDCIGGAKTGSGKTIAFAGP---MLTKWSEDPSGMFGV-VLTPTRELAMQIAEQFTALGSSMNIRVSVIVGGESIVQQALDLQRKPHFIIATPGRLAHHIMSSGDDTVGGLMRAKYLVLDEADILLTSTFADHLATCISALPPKDKRQTLLFTATITDQVKSLQNAPVQKGKPPLFAYQV</Hsp_hseq>
      <Hsp_midline>F SL   +S++  +++  M     T IQ   I  +LEGRD +  A+TGSGKT+AF  P   ++ K    P    GV VL+PTRELAMQ       L         +I+GG +   +A  L +  + ++ATPGRL  H+                LV+DEAD +L   F + +   I  LP   KRQT+LF+AT T +++ L  A +   K PL+ Y V</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YKR024C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:485144:487372:-1 gene:YKR024C transcript:YKR024C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP7 description:Putative ATP-dependent RNA helicase of the DEAD-box family; involved in ribosomal biogenesis; required at post-transcriptional step for efficient retrotransposition; essential for growth under anaerobic conditions [Source:SGD;Acc:S000001732]</Hit_def>
  <Hit_accession>YKR024C</Hit_accession>
  <Hit_len>742</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>106.301</Hsp_bit-score>
      <Hsp_score>264</Hsp_score>
      <Hsp_evalue>3.15707e-24</Hsp_evalue>
      <Hsp_query-from>274</Hsp_query-from>
      <Hsp_query-to>861</Hsp_query-to>
      <Hsp_hit-from>145</Hsp_hit-from>
      <Hsp_hit-to>367</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>79</Hsp_identity>
      <Hsp_positive>115</Hsp_positive>
      <Hsp_gaps>39</Hsp_gaps>
      <Hsp_align-len>229</Hsp_align-len>
      <Hsp_qseq>FEDMSFSSLAELVSEYTLKAVAEMGFATMTEIQHKSIRPLLEG---RDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGV--LVLSPTRELAMQTYGVLRELMKH-HVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHMQC--------------LVIDEADRILEVGFEEEIKQIIRL-------------LPKKRQTMLFSATQTRKIEDLAKISLK</Hsp_qseq>
      <Hsp_hseq>FASLGVSSL--LVSHLEQK----MRIKKPTSIQKQAIPQIIGNAGKNDFFIHAQTGSGKTLSYLLPIISTILNMDTHVDRTSGAFALVIAPTRELASQIYHVCSTLVSCCHYLVPCLLIGGERKKSEKARLRKGCNFIIGTPGRVLDHLQNTKVIKEQLSQSLRYIVLDEGDKLMELGFDETISEIIKIVHDIPINSEKFPKLPHKLVHMLCSATLTDGVNRLRNVALK</Hsp_hseq>
      <Hsp_midline>F  +  SSL  LVS    K    M     T IQ ++I  ++      D    A+TGSGKTL++L+P I  I  +       +G   LV++PTRELA Q Y V   L+   H     L++GG  + +E  +L KG N ++ TPGR+LDH+Q               +V+DE D+++E+GF+E I +II++             LP K   ML SAT T  +  L  ++LK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>17</Hit_num>
  <Hit_id>YOR204W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:722911:724725:1 gene:YOR204W transcript:YOR204W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DED1 description:ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA helicase; required for translation initiation of all yeast mRNAs; binds to mRNA cap-associated factors, and binding stimulates Ded1p RNA-dependent ATPase activity; mutation in human homolog DBY is associated with male infertility; human homolog DDX3X complements ded1 null mutation; DED1 has a paralog, DBP1, that arose from the whole genome duplication [Source:SGD;Acc:S000005730]</Hit_def>
  <Hit_accession>YOR204W</Hit_accession>
  <Hit_len>604</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>104.76</Hsp_bit-score>
      <Hsp_score>260</Hsp_score>
      <Hsp_evalue>5.42047e-24</Hsp_evalue>
      <Hsp_query-from>280</Hsp_query-from>
      <Hsp_query-to>849</Hsp_query-to>
      <Hsp_hit-from>131</Hsp_hit-from>
      <Hsp_hit-to>353</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>70</Hsp_identity>
      <Hsp_positive>117</Hsp_positive>
      <Hsp_gaps>33</Hsp_gaps>
      <Hsp_align-len>223</Hsp_align-len>
      <Hsp_qseq>DMSFSSLAELVSEYT--------LKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGT-----------GVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLD----------HMQCLVIDEADRILEVGFEEEIKQIIR---LLP-KKRQTMLFSATQTRKIEDLAK</Hsp_qseq>
      <Hsp_hseq>DASGKDVPEPITEFTSPPLDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMACAQTGSGKTGGFLFPVLSESFKTGPSPQPESQGSFYQRKAYPTAVIMAPTRELATQIFDEAKKFTYRSWVKACVVYGGSPIGNQLREIERGCDLLVATPGRLNDLLERGKISLANVKYLVLDEADRMLDMGFEPQIRHIVEDCDMTPVGERQTLMFSATFPADIQHLAR</Hsp_hseq>
      <Hsp_midline>D S   + E ++E+T        L+ +    F   T +Q  S+  +  GRD++A A+TGSGKT  FL P +    K    P+  +             ++++PTRELA Q +   ++          ++ GGS    + +++ +G ++LVATPGRL D          +++ LV+DEADR+L++GFE +I+ I+    + P  +RQT++FSAT    I+ LA+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>18</Hit_num>
  <Hit_id>YLR276C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:695046:696830:-1 gene:YLR276C transcript:YLR276C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP9 description:DEAD-box protein required for 27S rRNA processing; exhibits DNA, RNA and DNA/RNA helicase activities; ATPase activity shows preference for DNA over RNA; DNA helicase activity abolished by mutation in RNA-binding domain [Source:SGD;Acc:S000004266]</Hit_def>
  <Hit_accession>YLR276C</Hit_accession>
  <Hit_len>594</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>103.99</Hsp_bit-score>
      <Hsp_score>258</Hsp_score>
      <Hsp_evalue>1.15771e-23</Hsp_evalue>
      <Hsp_query-from>268</Hsp_query-from>
      <Hsp_query-to>849</Hsp_query-to>
      <Hsp_hit-from>10</Hsp_hit-from>
      <Hsp_hit-to>224</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>80</Hsp_identity>
      <Hsp_positive>115</Hsp_positive>
      <Hsp_gaps>23</Hsp_gaps>
      <Hsp_align-len>216</Hsp_align-len>
      <Hsp_qseq>GAFEDMSFSSLAELVSEYTLKAVAEMGFATMTEIQHKSI-RPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFM----PRNGTGVLVLSPTRELAMQTYGVLRELMKH---HVHTYGLIMGGSNRTAEAQKLAKGINILVATPGRLLDHMQC------------LVIDEADRILEVGFEEEIKQIIRLLPKKR--QTMLFSATQTRKIEDLAK</Hsp_qseq>
      <Hsp_hseq>GAYIDDSTTFEAFHLDSRLLQAIKNIGFQYPTLIQSHAIPLALQQKRDIIAKAATGSGKTLAYLIPVIETILEYKKTIDNGEENGTLGIILVPTRELAQQVYNVLEKLVLYCSKDIRTLNISSDMSD-SVLSTLLMDQPEIIVGTPGKLLDLLQTKINSISLNELKFLVVDEVDLVLTFGYQDDLNKIGEYLPLKKNLQTFLMSATLNDDIQALKQ</Hsp_hseq>
      <Hsp_midline>GA+ D S +  A  +    L+A+  +GF   T IQ  +I   L + RDI+A A TGSGKTLA+LIP IE I + K        NGT  ++L PTRELA Q Y VL +L+ +    + T  +    S+ +  +  L     I+V TPG+LLD +Q             LV+DE D +L  G+++++ +I   LP K+  QT L SAT    I+ L +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>19</Hit_num>
  <Hit_id>YDR243C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:948518:950284:-1 gene:YDR243C transcript:YDR243C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PRP28 description:RNA binding protein; involved in RNA isomerization at the 5&apos; splice site and for exchange of U6 for U1 snRNA at the 5&apos; splice site; similar to the RNA helicases of the DEAD-box family [Source:SGD;Acc:S000002651]</Hit_def>
  <Hit_accession>YDR243C</Hit_accession>
  <Hit_len>588</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>102.064</Hsp_bit-score>
      <Hsp_score>253</Hsp_score>
      <Hsp_evalue>4.30468e-23</Hsp_evalue>
      <Hsp_query-from>334</Hsp_query-from>
      <Hsp_query-to>885</Hsp_query-to>
      <Hsp_hit-from>189</Hsp_hit-from>
      <Hsp_hit-to>401</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>75</Hsp_identity>
      <Hsp_positive>117</Hsp_positive>
      <Hsp_gaps>35</Hsp_gaps>
      <Hsp_align-len>216</Hsp_align-len>
      <Hsp_qseq>VAEMGFATMTEIQHKSIRPLL---EGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPR-------NGTGVLVLSPTRELAMQ----TYGVLRELMKHHVHTYGL--IMGGSNRTAEAQKLAKGINILVATPGRLLD----------HMQCLVIDEADRILEVGFEEEIKQIIRLL------PKKRQTMLFSATQTRKIEDLAKISLKKEPLYGYV</Hsp_qseq>
      <Hsp_hseq>IQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPI--LIKMSRSPPRPPSLKIIDGPKALILAPTRELVQQIQKETQKVTKIWSKESNYDCKVISIVGGHSLEEISFSLSEGCDILVATPGRLIDSLENHLLVMKQVETLVLDEADKMIDLGFEDQVTNILTKVDINADSAVNRQTLMFTATMTPVIEKIAAGYMQK-PVYATI</Hsp_hseq>
      <Hsp_midline>+ E+ F + T IQ  +I  +    + RD L  A TGSGKTLAF+IP   LI   +  PR       +G   L+L+PTREL  Q    T  V +   K   +   +  I+GG +    +  L++G +ILVATPGRL+D           ++ LV+DEAD+++++GFE+++  I+  +         RQT++F+AT T  IE +A   ++K P+Y  +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>20</Hit_num>
  <Hit_id>YDR021W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:486804:488003:1 gene:YDR021W transcript:YDR021W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FAL1 description:Nucleolar protein required for maturation of 18S rRNA; member of the eIF4A subfamily of DEAD-box ATP-dependent RNA helicases; 18S rRNA biogenesis defect of the null mutant is functionally complemented by human EIF4A3 [Source:SGD;Acc:S000002428]</Hit_def>
  <Hit_accession>YDR021W</Hit_accession>
  <Hit_len>399</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>95.5153</Hsp_bit-score>
      <Hsp_score>236</Hsp_score>
      <Hsp_evalue>1.48413e-21</Hsp_evalue>
      <Hsp_query-from>325</Hsp_query-from>
      <Hsp_query-to>849</Hsp_query-to>
      <Hsp_hit-from>35</Hsp_hit-from>
      <Hsp_hit-to>218</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>62</Hsp_identity>
      <Hsp_positive>105</Hsp_positive>
      <Hsp_gaps>19</Hsp_gaps>
      <Hsp_align-len>189</Hsp_align-len>
      <Hsp_qseq>LKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKH-HVHTYGLIMGGSNRTAEAQKLAK-GINILVATPGRLLD----------HMQCLVIDEADRILE--VGFEEEIKQIIRLLPKKRQTMLFSATQTRKIEDLAK</Hsp_qseq>
      <Hsp_hseq>LRGIYSYGFEAPSSIQSRAITQIISGKDVIAQAQSGTGKTATFTIGLLQAID----LRKKDLQALILSPTRELASQIGQVVKNLGDYMNVNAFA-ITGGKTLKDDLKKMQKHGCQAVSGTPGRVLDMIKKQMLQTRNVQMLVLDEADELLSETLGFKQQIYDIFAKLPKNCQVVVVSATMNKDILEVTR</Hsp_hseq>
      <Hsp_midline>L+ +   GF   + IQ ++I  ++ G+D++A A++G+GKT  F I  ++ I     + +     L+LSPTRELA Q   V++ L  + +V+ +  I GG     + +K+ K G   +  TPGR+LD          ++Q LV+DEAD +L   +GF+++I  I   LPK  Q ++ SAT  + I ++ +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>21</Hit_num>
  <Hit_id>YBR142W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:528317:530638:1 gene:YBR142W transcript:YBR142W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MAK5 description:Essential nucleolar protein; putative DEAD-box RNA helicase required for maintenance of M1 dsRNA virus; involved in biogenesis of large (60S) ribosomal subunits [Source:SGD;Acc:S000000346]</Hit_def>
  <Hit_accession>YBR142W</Hit_accession>
  <Hit_len>773</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>92.4337</Hsp_bit-score>
      <Hsp_score>228</Hsp_score>
      <Hsp_evalue>7.72579e-20</Hsp_evalue>
      <Hsp_query-from>289</Hsp_query-from>
      <Hsp_query-to>819</Hsp_query-to>
      <Hsp_hit-from>172</Hsp_hit-from>
      <Hsp_hit-to>380</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>76</Hsp_identity>
      <Hsp_positive>115</Hsp_positive>
      <Hsp_gaps>42</Hsp_gaps>
      <Hsp_align-len>214</Hsp_align-len>
      <Hsp_qseq>FSSLAELVSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIE-LIHKIKFMPRNGTGV-LVLSPTRELAMQTYGVLRE-----LMKHHVHTYGLIMGGSNRTAEAQKLAKGIN---ILVATPGRLLDHMQ-------------CLVIDEADRILEVGFEEEIKQIIR-LLPKKR-------------QTMLFSAT</Hsp_qseq>
      <Hsp_hseq>WTNLAPL-SMTILQSLQNLNFLRPTEIQKKSIPVIMQGVDVMGKASTGSGKTLAYGIPIVEKLIS--NFSQKNKKPISLIFTPTRELAHQVTDHLKKICEPVLAKSQYSILSLTGGLS--IQKQQRLLKYDNSGQIVIATPGRFLELLEKDNTLIKRFSKVNTLILDEADRLLQDGHFDEFEKIIKHLLVERRKNRENSEGSSKIWQTLIFSAT</Hsp_hseq>
      <Hsp_midline>+++LA L S   L+++  + F   TEIQ KSI  +++G D++  A TGSGKTLA+ IP +E LI    F  +N   + L+ +PTRELA Q    L++     L K       L  G S    + Q+L K  N   I++ATPGR L+ ++              L++DEADR+L+ G  +E ++II+ LL ++R             QT++FSAT</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>22</Hit_num>
  <Hit_id>YDL084W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:305237:306577:1 gene:YDL084W transcript:YDL084W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SUB2 description:Component of the TREX complex required for nuclear mRNA export; member of the DEAD-box RNA helicase superfamily and is involved in early and late steps of spliceosome assembly; homolog of the human splicing factor hUAP56; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000002242]</Hit_def>
  <Hit_accession>YDL084W</Hit_accession>
  <Hit_len>446</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>86.6557</Hsp_bit-score>
      <Hsp_score>213</Hsp_score>
      <Hsp_evalue>1.6712e-18</Hsp_evalue>
      <Hsp_query-from>208</Hsp_query-from>
      <Hsp_query-to>1041</Hsp_query-to>
      <Hsp_hit-from>43</Hsp_hit-from>
      <Hsp_hit-to>338</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>80</Hsp_identity>
      <Hsp_positive>140</Hsp_positive>
      <Hsp_gaps>46</Hsp_gaps>
      <Hsp_align-len>310</Hsp_align-len>
      <Hsp_qseq>TDGETKDSDDDGPALPIGTTGAFEDMSFSSLAELVSEYTLKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKH--HVHTYGLIMGGSNRTAEAQKLAK---GINILVATPGRL----------LDHMQCLVIDEADRIL-EVGFEEEIKQIIRLLPKKRQTMLFSATQTRKI----------------EDLAKISLKKEPLYGYVVCPSEXXXXXXXXXXXXXXXXXIMVFFSSCMSVKFHYELFNYIDLPVMGIHG</Hsp_qseq>
      <Hsp_hseq>NNNNTAAGDKKGSYVGIHSTG-FKDF-------LLKPELSRAIIDCGFEHPSEVQQHTIPQSIHGTDVLCQAKSGLGKTAVFVLSTLQQLDPVP----GEVAVVVICNARELAYQIRNEYLRFSKYMPDVKT-AVFYGGTPISKDAELLKNKDTAPHIVVATPGRLKALVREKYIDLSHVKNFVIDECDKVLEELDMRRDVQEIFRATPRDKQVMMFSATLSQEIRPICRRFLQNPLEIFVDDEAKLTLHGLQQY-YIKLEEREKNRKLAQLLDDLEFNQVIIFVKSTTRANELTKLLNASNFPAITVHG</Hsp_hseq>
      <Hsp_midline> +  T   D  G  + I +TG F+D        L+     +A+ + GF   +E+Q  +I   + G D+L  A++G GKT  F++  ++ +  +         V+V+   RELA Q         K+   V T  +  GG+  + +A+ L       +I+VATPGRL          L H++  VIDE D++L E+    ++++I R  P+ +Q M+FSAT +++I                +D AK++L     Y Y+     ++   L   L      ++++F  S        +L N  + P + +HG</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>23</Hit_num>
  <Hit_id>YGL171W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:182390:184084:1 gene:YGL171W transcript:YGL171W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ROK1 description:RNA-dependent ATPase; involved in pre-rRNA processing at sites A0, A1, and A2, and in control of cell cycle progression; contains two upstream open reading frames (uORFs) in 5&apos; untranslated region which regulate translation [Source:SGD;Acc:S000003139]</Hit_def>
  <Hit_accession>YGL171W</Hit_accession>
  <Hit_len>564</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>81.6481</Hsp_bit-score>
      <Hsp_score>200</Hsp_score>
      <Hsp_evalue>1.28226e-16</Hsp_evalue>
      <Hsp_query-from>181</Hsp_query-from>
      <Hsp_query-to>849</Hsp_query-to>
      <Hsp_hit-from>63</Hsp_hit-from>
      <Hsp_hit-to>324</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>79</Hsp_identity>
      <Hsp_positive>123</Hsp_positive>
      <Hsp_gaps>53</Hsp_gaps>
      <Hsp_align-len>269</Hsp_align-len>
      <Hsp_qseq>DDEKRSGEGT--DGETKDSDDDGPALPIGT----------------TGAFEDMSFSSLAELVSEYT-----LKAVAEMGFATMTEIQHKSIRPLLEGRDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQ--------TYGVLRELMKH-HVHTYGLIMGG--SNRTAEAQKLAKGINILVATPGRLLD----------HMQCLVIDEADRILEVGFEEEIKQIIRLL--PKKRQTMLFSATQTRKIEDLAK</Hsp_qseq>
      <Hsp_hseq>DDREKTTENDSPNKEEKSGNDDGLIKPVITNTVEASALRKSYKGNVSGIDIPLPIGSFEDLISRFSFDKRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQI--IDDKQTAGLKGLIISPTKELANQIFIECFKLSYKIFLEKKRPLQVALLSKSLGAKLKNKVVSDKKY----DIIISTPLRLIDVVKNEALDLSKVKHLIFDEADKLFDKTFVEQSDDILSACREPSLRKAM-FSATIPSNVEEIAQ</Hsp_hseq>
      <Hsp_midline>DD +++ E    + E K  +DDG   P+ T                +G    +   S  +L+S ++     L  + E GF   T IQ + I   L  RD+LA   TGSGKTLAFLIP ++ I  I      G   L++SPT+ELA Q        +Y +  E  +   V      +G    N+    +K     +I+++TP RL+D           ++ L+ DEAD++ +  F E+   I+     P  R+ M FSAT    +E++A+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>24</Hit_num>
  <Hit_id>YOR046C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:414459:415907:-1 gene:YOR046C transcript:YOR046C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP5 description:Cytoplasmic ATP-dependent RNA helicase of the DEAD-box family; involved in mRNA export from the nucleus, remodeling messenger ribonucleoprotein particles (mRNPs), with ATPase activity stimulated by Gle1p, IP6 and Nup159p; involved in translation termination along with Sup45p (eRF1); role in the cellular response to heat stress [Source:SGD;Acc:S000005572]</Hit_def>
  <Hit_accession>YOR046C</Hit_accession>
  <Hit_len>482</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>80.8777</Hsp_bit-score>
      <Hsp_score>198</Hsp_score>
      <Hsp_evalue>1.45214e-16</Hsp_evalue>
      <Hsp_query-from>244</Hsp_query-from>
      <Hsp_query-to>849</Hsp_query-to>
      <Hsp_hit-from>84</Hsp_hit-from>
      <Hsp_hit-to>283</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>66</Hsp_identity>
      <Hsp_positive>112</Hsp_positive>
      <Hsp_gaps>34</Hsp_gaps>
      <Hsp_align-len>218</Hsp_align-len>
      <Hsp_qseq>PALPIGTTGAFEDMSFSSLAELVSEYTLKAVAEMGFATMTEIQHKSIRPLLEG--RDILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGS---NRTAEAQKLAKGINILVATPGRLLDHM----------QCLVIDEADRIL-EVGFEEEIKQIIRLLPKKRQTMLFSATQTRKIEDLAK</Hsp_qseq>
      <Hsp_hseq>PNSPLYSAKSFDELGLA--PEL-----LKGIYAMKFQKPSKIQERALPLLLHNPPRNMIAQSQSGTGKTAAFSLTMLTRVNPEDASPQ----AICLAPSRELARQTLEVVQEMGKFTKITSQLIVPDSFEKNKQINAQ-------VIVGTPGTVLDLMRRKLMQLQKIKIFVLDEADNMLDQQGLGDQCIRVKRFLPKDTQLVLFSATFADAVRQYAK</Hsp_hseq>
      <Hsp_midline>P  P+ +  +F+++  +   EL     LK +  M F   ++IQ +++  LL    R+++A +++G+GKT AF +  +  ++     P+     + L+P+RELA QT  V++E+ K    T  LI+  S   N+   AQ       ++V TPG +LD M          +  V+DEAD +L + G  ++  ++ R LPK  Q +LFSAT    +   AK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>25</Hit_num>
  <Hit_id>YNR038W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:695595:697484:1 gene:YNR038W transcript:YNR038W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DBP6 description:Essential protein involved in ribosome biogenesis; putative ATP-dependent RNA helicase of the DEAD-box protein family; human homolog DDX51 complements yeast dbp6 mutant [Source:SGD;Acc:S000005321]</Hit_def>
  <Hit_accession>YNR038W</Hit_accession>
  <Hit_len>629</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>76.6406</Hsp_bit-score>
      <Hsp_score>187</Hsp_score>
      <Hsp_evalue>4.69502e-15</Hsp_evalue>
      <Hsp_query-from>406</Hsp_query-from>
      <Hsp_query-to>876</Hsp_query-to>
      <Hsp_hit-from>229</Hsp_hit-from>
      <Hsp_hit-to>401</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>57</Hsp_identity>
      <Hsp_positive>88</Hsp_positive>
      <Hsp_gaps>22</Hsp_gaps>
      <Hsp_align-len>176</Hsp_align-len>
      <Hsp_qseq>DILAAARTGSGKTLAFLIPAIELIHKIKFMPRNGTGVLVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAK-GINILVATPGRLLDH----------MQCLVIDEADRILEVGFEEEIKQIIR--------LLPKKRQTMLFSATQTRKIEDLAKISLKKEPLY</Hsp_qseq>
      <Hsp_hseq>DILVNAATGSGKTLAYSIPIVQTLFKRQI---NRLRCIIIVPTKLLINQVYTTLTKLTQGTSLIVSIAKLENSLKDEHKKLSNLEPDILITTPGRLVDHLNMKSINLKNLKFLIIDEADRLLNQSFQGWCPKLMSHLKTDKLDTLPGNVIKMIFSATLTTNTEKLNGLNLYKPKLF</Hsp_hseq>
      <Hsp_midline>DIL  A TGSGKTLA+ IP ++ + K +    N    +++ PT+ L  Q Y  L +L +       +    ++   E +KL+    +IL+ TPGRL+DH          ++ L+IDEADR+L   F+    +++          LP     M+FSAT T   E L  ++L K  L+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>26</Hit_num>
  <Hit_id>YGL064C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:381523:383208:-1 gene:YGL064C transcript:YGL064C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MRH4 description:Mitochondrial ATP-dependent RNA helicase of the DEAD-box family; required for assembly of the large subunit of mitochondrial ribosomes; binds to the large subunit rRNA, 21S_rRNA; localizes to the matrix face of the mitochondrial inner membrane and associates with the large subunit precursor and with mature ribosomes [Source:SGD;Acc:S000003032]</Hit_def>
  <Hit_accession>YGL064C</Hit_accession>
  <Hit_len>561</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>52.373</Hsp_bit-score>
      <Hsp_score>124</Hsp_score>
      <Hsp_evalue>1.84944e-07</Hsp_evalue>
      <Hsp_query-from>418</Hsp_query-from>
      <Hsp_query-to>819</Hsp_query-to>
      <Hsp_hit-from>163</Hsp_hit-from>
      <Hsp_hit-to>320</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>48</Hsp_identity>
      <Hsp_positive>73</Hsp_positive>
      <Hsp_gaps>32</Hsp_gaps>
      <Hsp_align-len>162</Hsp_align-len>
      <Hsp_qseq>AARTGSGKTLAFLIPAIELIHKIKF-MP------RNGTGV--LVLSPTRELAMQTYGVLRELMKHHVHTYGLIMGGSNRTAEAQKLAKGI----NILVATPGRLLDHMQC---------------LVIDEADRILEVGFEEEIKQIIRLLPKKRQTMLFSAT</Hsp_qseq>
      <Hsp_hseq>AAETGSGKTMAYLIPLIDYLKRQELETPELWETLRKNVLIRSIILVPTHELVDQVY----ETVSKTKTLLGLNSFKWDKATSYRDLLENIKNRIDILVTTPGKLLNLFSIRMITRPDKVLSKVGFVVLDEADTLLDRSWLEETHSAIKRIPNINHLIFCSAT</Hsp_hseq>
      <Hsp_midline>AA TGSGKT+A+LIP I+ + + +   P      R    +  ++L PT EL  Q Y    E +       GL     ++    + L + I    +ILV TPG+LL+                   +V+DEAD +L+  + EE    I+ +P     +  SAT</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1320390393</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>3</Iteration_iter-num>
  <Iteration_query-ID>Query_3</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060969-RA transcript Note:&quot;Similar to MUC2 Mucin-2 (Homo sapiens)&quot; offset:0 AED:0.42 eAED:0.42 QI:0|0|0|0.42|1|0.85|7|0|378</Iteration_query-def>
  <Iteration_query-len>1137</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>666278496</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>4</Iteration_iter-num>
  <Iteration_query-ID>Query_4</Iteration_query-ID>
  <Iteration_query-def>PMZ_0038878-RA transcript Note:&quot;Similar to Gdf11 Growth/differentiation factor 11 (Rattus norvegicus)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0.33|0.5|4|0|268</Iteration_query-def>
  <Iteration_query-len>807</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>88</Statistics_hsp-len>
      <Statistics_eff-space>422321327</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>5</Iteration_iter-num>
  <Iteration_query-ID>Query_5</Iteration_query-ID>
  <Iteration_query-def>PMZ_0044968-RA transcript Note:&quot;Similar to PPP1R1A Protein phosphatase 1 regulatory subunit 1A (Oryctolagus cuniculus)&quot; offset:185 AED:1.00 eAED:1.00 QI:185|0|0|0|0.5|0.6|5|47|303</Iteration_query-def>
  <Iteration_query-len>1144</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>670905430</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>6</Iteration_iter-num>
  <Iteration_query-ID>Query_6</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060988-RA transcript Note:&quot;Similar to STARD3NL STARD3 N-terminal-like protein (Homo sapiens)&quot; offset:229 AED:0.13 eAED:0.13 QI:229|0.55|0.8|1|0.88|0.9|10|184|293</Iteration_query-def>
  <Iteration_query-len>1295</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>92</Statistics_hsp-len>
      <Statistics_eff-space>782027913</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>7</Iteration_iter-num>
  <Iteration_query-ID>Query_7</Iteration_query-ID>
  <Iteration_query-def>PMZ_0032047-RA transcript Note:&quot;Similar to PTH1R Parathyroid hormone/parathyroid hormone-related peptide receptor (Didelphis virginiana)&quot; offset:0 AED:0.45 eAED:0.45 QI:0|0|0|0.14|0.23|0.35|14|0|531</Iteration_query-def>
  <Iteration_query-len>1596</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>94</Statistics_hsp-len>
      <Statistics_eff-space>1004626146</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>8</Iteration_iter-num>
  <Iteration_query-ID>Query_8</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060986-RA transcript Note:&quot;Similar to TFCP2 Transcription factor CP2 (Gallus gallus)&quot; offset:0 AED:0.47 eAED:0.47 QI:0|0|0|0.66|0.5|0.33|9|0|694</Iteration_query-def>
  <Iteration_query-len>2085</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1365999733</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>9</Iteration_iter-num>
  <Iteration_query-ID>Query_9</Iteration_query-ID>
  <Iteration_query-def>PMZ_0032049-RA transcript Note:&quot;Similar to clasp1 CLIP-associating protein 1 (Xenopus tropicalis)&quot; offset:69 AED:0.14 eAED:0.14 QI:69|0.55|0.47|1|0.55|0.52|19|1441|860</Iteration_query-def>
  <Iteration_query-len>4093</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>102</Statistics_hsp-len>
      <Statistics_eff-space>2827974154</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>10</Iteration_iter-num>
  <Iteration_query-ID>Query_10</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060987-RA transcript Note:&quot;Similar to RPL17 60S ribosomal protein L17 (Homo sapiens)&quot; offset:1014 AED:0.30 eAED:0.30 QI:1014|1|1|1|0.83|0.71|7|895|184</Iteration_query-def>
  <Iteration_query-len>2464</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YKL180W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:109269:110129:1 gene:YKL180W transcript:YKL180W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPL17A description:Ribosomal 60S subunit protein L17A; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; copurifies with the Dam1 complex (aka DASH complex); homologous to mammalian ribosomal protein L17 and bacterial L22; RPL17A has a paralog, RPL17B, that arose from the whole genome duplication; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000001663]</Hit_def>
  <Hit_accession>YKL180W</Hit_accession>
  <Hit_len>184</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>187.963</Hsp_bit-score>
      <Hsp_score>476</Hsp_score>
      <Hsp_evalue>9.35338e-56</Hsp_evalue>
      <Hsp_query-from>1015</Hsp_query-from>
      <Hsp_query-to>1467</Hsp_query-to>
      <Hsp_hit-from>1</Hsp_hit-from>
      <Hsp_hit-to>151</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>87</Hsp_identity>
      <Hsp_positive>105</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>151</Hsp_align-len>
      <Hsp_qseq>MGRYSLDPENPTKSCKARGSNLRVHFKNTRETAHTIKGMHIRKATKYLKDVVLMKQCVPFRRYNGGVGRCAQAKAWDWTQGRWPKKSAEFLLQLLKNAESNAEFKGLDVDSLVIEHIQVNKAPHMRRRTYRAHGRINPYMSSPCHIELILT</Hsp_qseq>
      <Hsp_hseq>MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLEQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVT</Hsp_hseq>
      <Hsp_midline>M RY     NP KS  ARGS LRV FKNTRETA  I G  + KA KYL+ V+  ++ +PFRR+N  +GR AQ K +  T+ RWP KS +F+  LL+NA +NAE KGLD   L + HIQVN+AP  RRRTYRAHGRIN Y SSP HIEL++T</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YJL177W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:90786:91657:1 gene:YJL177W transcript:YJL177W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPL17B description:Ribosomal 60S subunit protein L17B; required for processing of 27SB pre-rRNA and formation of stable 66S assembly intermediates; homologous to mammalian ribosomal protein L17 and bacterial L22; RPL17B has a paralog, RPL17A, that arose from the whole genome duplication [Source:SGD;Acc:S000003713]</Hit_def>
  <Hit_accession>YJL177W</Hit_accession>
  <Hit_len>184</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>187.193</Hsp_bit-score>
      <Hsp_score>474</Hsp_score>
      <Hsp_evalue>2.00922e-55</Hsp_evalue>
      <Hsp_query-from>1015</Hsp_query-from>
      <Hsp_query-to>1467</Hsp_query-to>
      <Hsp_hit-from>1</Hsp_hit-from>
      <Hsp_hit-to>151</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>87</Hsp_identity>
      <Hsp_positive>104</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>151</Hsp_align-len>
      <Hsp_qseq>MGRYSLDPENPTKSCKARGSNLRVHFKNTRETAHTIKGMHIRKATKYLKDVVLMKQCVPFRRYNGGVGRCAQAKAWDWTQGRWPKKSAEFLLQLLKNAESNAEFKGLDVDSLVIEHIQVNKAPHMRRRTYRAHGRINPYMSSPCHIELILT</Hsp_qseq>
      <Hsp_hseq>MARYGATSTNPAKSASARGSYLRVSFKNTRETAQAINGWELTKAQKYLDQVLDHQRAIPFRRFNSSIGRTAQGKEFGVTKARWPAKSVKFVQGLLQNAAANAEAKGLDATKLYVSHIQVNQAPKQRRRTYRAHGRINKYESSPSHIELVVT</Hsp_hseq>
      <Hsp_midline>M RY     NP KS  ARGS LRV FKNTRETA  I G  + KA KYL  V+  ++ +PFRR+N  +GR AQ K +  T+ RWP KS +F+  LL+NA +NAE KGLD   L + HIQVN+AP  RRRTYRAHGRIN Y SSP HIEL++T</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>98</Statistics_hsp-len>
      <Statistics_eff-space>1639234041</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>11</Iteration_iter-num>
  <Iteration_query-ID>Query_11</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060989-RA transcript Note:&quot;Similar to Slc35b1 Solute carrier family 35 member B1 (Rattus norvegicus)&quot; offset:0 AED:0.39 eAED:0.39 QI:0|0|0|0.66|1|1|3|0|117</Iteration_query-def>
  <Iteration_query-len>354</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>78</Statistics_hsp-len>
      <Statistics_eff-space>95970680</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>12</Iteration_iter-num>
  <Iteration_query-ID>Query_12</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060990-RA transcript Note:&quot;Similar to slc35b1 Solute carrier family 35 member B1 (Xenopus tropicalis)&quot; offset:0 AED:0.69 eAED:0.69 QI:0|0|0|0.66|1|1|3|0|130</Iteration_query-def>
  <Iteration_query-len>393</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>79</Statistics_hsp-len>
      <Statistics_eff-space>124418684</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>13</Iteration_iter-num>
  <Iteration_query-ID>Query_13</Iteration_query-ID>
  <Iteration_query-def>PMZ_0047271-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0|0.25|4|434|84</Iteration_query-def>
  <Iteration_query-len>689</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>86</Statistics_hsp-len>
      <Statistics_eff-space>335544781</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>14</Iteration_iter-num>
  <Iteration_query-ID>Query_14</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060991-RA transcript Note:&quot;Similar to Lztfl1 Leucine zipper transcription factor-like protein 1 (Rattus norvegicus)&quot; offset:206 AED:0.11 eAED:0.11 QI:206|0.71|0.87|1|0.85|0.87|8|2607|235</Iteration_query-def>
  <Iteration_query-len>3521</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>100</Statistics_hsp-len>
      <Statistics_eff-space>2418613891</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>15</Iteration_iter-num>
  <Iteration_query-ID>Query_15</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060992-RA transcript Note:&quot;Similar to Smarce1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily E member 1 (Mus musculus)&quot; offset:334 AED:0.11 eAED:0.11 QI:334|0.88|0.9|1|0.44|0.5|10|0|344</Iteration_query-def>
  <Iteration_query-len>1369</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YBR089C-A</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:426190:426489:-1 gene:YBR089C-A transcript:YBR089C-A_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NHP6B description:High-mobility group (HMG) protein; binds to and remodels nucleosomes; involved in recruiting FACT and other chromatin remodelling complexes to the chromosomes; functionally redundant with Nhp6Ap; required for transcriptional initiation fidelity of some tRNA genes; homologous to mammalian HMGB1 and HMGB2; NHP6B has a paralog, NHP6A, that arose from the whole genome duplication [Source:SGD;Acc:S000002157]</Hit_def>
  <Hit_accession>YBR089C-A</Hit_accession>
  <Hit_len>99</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>43.5134</Hsp_bit-score>
      <Hsp_score>101</Hsp_score>
      <Hsp_evalue>3.93334e-06</Hsp_evalue>
      <Hsp_query-from>503</Hsp_query-from>
      <Hsp_query-to>637</Hsp_query-to>
      <Hsp_hit-from>43</Hsp_hit-from>
      <Hsp_hit-to>87</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>18</Hsp_identity>
      <Hsp_positive>30</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>45</Hsp_align-len>
      <Hsp_qseq>DQVKASNPDLKLWEIGKIIGGMWRDLSDEEKQEYINDYEAEKIEY</Hsp_qseq>
      <Hsp_hseq>DIVRSENPDVTFGQVGRILGERWKALTAEEKQPYESKAQADKKRY</Hsp_hseq>
      <Hsp_midline>D V++ NPD+   ++G+I+G  W+ L+ EEKQ Y +  +A+K  Y</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>93</Statistics_hsp-len>
      <Statistics_eff-space>834996921</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>16</Iteration_iter-num>
  <Iteration_query-ID>Query_16</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060993-RA transcript Note:&quot;Similar to COL2A1 Collagen alpha-1(II) chain (Bos taurus)&quot; offset:0 AED:0.32 eAED:0.32 QI:0|0.52|0.74|0.88|0.73|0.82|35|0|993</Iteration_query-def>
  <Iteration_query-len>2982</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>2023296965</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>17</Iteration_iter-num>
  <Iteration_query-ID>Query_17</Iteration_query-ID>
  <Iteration_query-def>PMZ_0060994-RA transcript Note:&quot;Similar to HDAC4 Histone deacetylase 4 (Gallus gallus)&quot; offset:0 AED:0.27 eAED:0.31 QI:0|0|0|0.81|0.86|0.81|16|0|730</Iteration_query-def>
  <Iteration_query-len>2193</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YNL021W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:593227:595347:1 gene:YNL021W transcript:YNL021W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HDA1 description:Putative catalytic subunit of a class II histone deacetylase complex; role in azole resistance via Hsp90p, and in the heat shock response; Hda1p interacts with the Hda2p-Hda3p subcomplex to form an active tetramer; deletion increases histone H2B, H3 and H4 acetylation; other members of the HDA1 histone deacetylase complex are Hda2p and Hda3p [Source:SGD;Acc:S000004966]</Hit_def>
  <Hit_accession>YNL021W</Hit_accession>
  <Hit_len>706</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>143.28</Hsp_bit-score>
      <Hsp_score>360</Hsp_score>
      <Hsp_evalue>5.31233e-36</Hsp_evalue>
      <Hsp_query-from>1549</Hsp_query-from>
      <Hsp_query-to>2076</Hsp_query-to>
      <Hsp_hit-from>223</Hsp_hit-from>
      <Hsp_hit-to>397</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>82</Hsp_identity>
      <Hsp_positive>122</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>181</Hsp_align-len>
      <Hsp_qseq>VAARELKQKL--NVKRVLIVDWDVHHGNGTQQAFYSDPSVLYVSLHRHDDGNFFPXXX--XXXXXXXXXXXXFNVNIAW-TGGLNPPMGDADYLAAFRLLVMPIANEFSPDVVLVSAGFDAVEGHPAPLGGYNVTAKCFGYLTQQLMTLAGGRVVLSLEGGHDLTAICDASEACVYSLLGS</Hsp_qseq>
      <Hsp_hseq>VAAKNILKNYPESVRRIMILDWDIHHGNGTQKSFYQDDQVLYVSLHRFEMGKYYPGTIQGQYDQTGEGKGEGFNCNITWPVGGV----GDAEYMWAFEQVVMPMGREFKPDLVIISSGFDAADGD--TIGQCHVTPSCYGHMTHMLKSLARGNLCVVLEGGYNLDAIARSALSVAKVLIGE</Hsp_hseq>
      <Hsp_midline>VAA+ + +    +V+R++I+DWD+HHGNGTQ++FY D  VLYVSLHR + G ++PG+     D+ G G GEGFN NI W  GG+    GDA+Y+ AF  +VMP+  EF PD+V++S+GFDA +G    +G  +VT  C+G++T  L +LA G + + LEGG++L AI  ++ +    L+G </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YGL194C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:140368:141726:-1 gene:YGL194C transcript:YGL194C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HOS2 description:Histone deacetylase and subunit of Set3 and Rpd3L complexes; required for gene activation via specific deacetylation of lysines in H3 and H4 histone tails; subunit of the Set3 complex, a meiotic-specific repressor of sporulation specific genes that contains deacetylase activity; co-localizes with Cmr1p in nuclear foci in response to DNA damage by MMS [Source:SGD;Acc:S000003162]</Hit_def>
  <Hit_accession>YGL194C</Hit_accession>
  <Hit_len>452</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>66.2402</Hsp_bit-score>
      <Hsp_score>160</Hsp_score>
      <Hsp_evalue>6.48117e-12</Hsp_evalue>
      <Hsp_query-from>1588</Hsp_query-from>
      <Hsp_query-to>1953</Hsp_query-to>
      <Hsp_hit-from>187</Hsp_hit-from>
      <Hsp_hit-to>301</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>71</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>122</Hsp_align-len>
      <Hsp_qseq>RVLIVDWDVHHGNGTQQAFYSDPSVLYVSLHRHDDGNFFPXXXXXXXXXXXXXXXFNVNIAWTGGLNPPMGDADYLAAFRLLVMPIANEFSPDVVLVSAGFDAVEGHPAPLGGYNVTAKCFG</Hsp_qseq>
      <Hsp_hseq>RILYIDIDLHHGDGVQEAFYTTDRVFTLSFHKY-NGEFFPGTGDLTEIGCDKGKHFALNVPLEDGID----DDSYINLFKSIVDPLIMTFKPTLIVQQCGADSL-GHDR-LGCFNLNIKAHG</Hsp_hseq>
      <Hsp_midline>R+L +D D+HHG+G Q+AFY+   V  +S H++ +G FFPG+G   E+G   G+ F +N+    G++    D  Y+  F+ +V P+   F P +++   G D++ GH   LG +N+  K  G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YNL330C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:18001:19302:-1 gene:YNL330C transcript:YNL330C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RPD3 description:Histone deacetylase, component of both the Rpd3S and Rpd3L complexes; regulates transcription, silencing, autophagy and other processes by influencing chromatin remodeling; forms at least two different complexes which have distinct functions and members; Rpd3(L) recruitment to the subtelomeric region is regulated by interaction with the arginine methyltransferase, Hmt1p [Source:SGD;Acc:S000005274]</Hit_def>
  <Hit_accession>YNL330C</Hit_accession>
  <Hit_len>433</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>65.855</Hsp_bit-score>
      <Hsp_score>159</Hsp_score>
      <Hsp_evalue>9.52981e-12</Hsp_evalue>
      <Hsp_query-from>1588</Hsp_query-from>
      <Hsp_query-to>1989</Hsp_query-to>
      <Hsp_hit-from>179</Hsp_hit-from>
      <Hsp_hit-to>311</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>49</Hsp_identity>
      <Hsp_positive>79</Hsp_positive>
      <Hsp_gaps>15</Hsp_gaps>
      <Hsp_align-len>141</Hsp_align-len>
      <Hsp_qseq>RVLIVDWDVHHGNGTQQAFYSDPSVLYVSLHRHDDGNFFPXXXXXXXXXXXXXXXFNVNIAWTGGLNPPMGDADYLAAFRLLVMPIANEFSPDVVLVSAGFDAVEGHPAPLGGYNVT----AKCFGYLTQ---QLMTLAGG</Hsp_qseq>
      <Hsp_hseq>RVLYIDIDVHHGDGVEEAFYTTDRVMTCSFHKY--GEFFPGTGELRDIGVGAGKNYAVNVPLRDGID----DATYRSVFEPVIKKIMEWYQPSAVVLQCGGDSLSGD--RLGCFNLSMEGHANCVNYVKSFGIPMMVVGGG</Hsp_hseq>
      <Hsp_midline>RVL +D DVHHG+G ++AFY+   V+  S H++  G FFPG+G   ++GVGAG+ + VN+    G++    DA Y + F  ++  I   + P  V++  G D++ G    LG +N++    A C  Y+      +M + GG</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>97</Statistics_hsp-len>
      <Statistics_eff-space>1441631678</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>18</Iteration_iter-num>
  <Iteration_query-ID>Query_18</Iteration_query-ID>
  <Iteration_query-def>PMZ_0038856-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.25 eAED:0.25 QI:0|0|0|0.66|0.5|0.33|3|0|127</Iteration_query-def>
  <Iteration_query-len>384</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>79</Statistics_hsp-len>
      <Statistics_eff-space>117240683</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>19</Iteration_iter-num>
  <Iteration_query-ID>Query_19</Iteration_query-ID>
  <Iteration_query-def>PMZ_0035605-RA transcript Note:&quot;Similar to FAM117B Protein FAM117B (Homo sapiens)&quot; offset:0 AED:0.36 eAED:0.49 QI:0|0.25|0.22|0.66|0.12|0.22|9|102|385</Iteration_query-def>
  <Iteration_query-len>1260</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>92</Statistics_hsp-len>
      <Statistics_eff-space>756652376</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>

