<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
  <BlastOutput_program>blastx</BlastOutput_program>
  <BlastOutput_version>BLASTX 2.10.0+</BlastOutput_version>
  <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
  <BlastOutput_db>/home/smr/dbs/ensembl/release-100/Saccharomyces_cerevisiae.R64-1-1.pep.all.fa</BlastOutput_db>
  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
  <BlastOutput_query-def>PMZ_0038592-RA transcript Note:&quot;Similar to Tfap2b Transcription factor AP-2-beta (Mus musculus)&quot; offset:32 AED:1.00 eAED:1.00 QI:32|0|0|0|0|0|2|0|106</BlastOutput_query-def>
  <BlastOutput_query-len>353</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_matrix>BLOSUM62</Parameters_matrix>
      <Parameters_expect>1e-05</Parameters_expect>
      <Parameters_gap-open>11</Parameters_gap-open>
      <Parameters_gap-extend>1</Parameters_gap-extend>
      <Parameters_filter>L;</Parameters_filter>
    </Parameters>
  </BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
  <Iteration_iter-num>1</Iteration_iter-num>
  <Iteration_query-ID>Query_1</Iteration_query-ID>
  <Iteration_query-def>PMZ_0038592-RA transcript Note:&quot;Similar to Tfap2b Transcription factor AP-2-beta (Mus musculus)&quot; offset:32 AED:1.00 eAED:1.00 QI:32|0|0|0|0|0|2|0|106</Iteration_query-def>
  <Iteration_query-len>353</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>77</Statistics_hsp-len>
      <Statistics_eff-space>96234680</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>2</Iteration_iter-num>
  <Iteration_query-ID>Query_2</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056586-RA transcript Note:&quot;Similar to TFAP2B Transcription factor AP-2-beta (Homo sapiens)&quot; offset:0 AED:0.26 eAED:0.26 QI:0|0|0|0.33|1|1|3|0|98</Iteration_query-def>
  <Iteration_query-len>297</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>70</Statistics_hsp-len>
      <Statistics_eff-space>71109943</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>3</Iteration_iter-num>
  <Iteration_query-ID>Query_3</Iteration_query-ID>
  <Iteration_query-def>PMZ_0041050-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:1.00 eAED:1.00 QI:0|-1|0|0|-1|0|1|0|270</Iteration_query-def>
  <Iteration_query-len>813</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>88</Statistics_hsp-len>
      <Statistics_eff-space>426987861</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>4</Iteration_iter-num>
  <Iteration_query-ID>Query_4</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056548-RA transcript Note:&quot;Similar to DNAJC27 DnaJ homolog subfamily C member 27 (Gallus gallus)&quot; offset:508 AED:0.39 eAED:0.39 QI:508|0.66|0.85|1|0.83|0.71|7|0|214</Iteration_query-def>
  <Iteration_query-len>1153</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YFL038C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:55366:55986:-1 gene:YFL038C transcript:YFL038C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT1 description:Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles [Source:SGD;Acc:S000001856]</Hit_def>
  <Hit_accession>YFL038C</Hit_accession>
  <Hit_len>206</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>83.1889</Hsp_bit-score>
      <Hsp_score>204</Hsp_score>
      <Hsp_evalue>3.38822e-19</Hsp_evalue>
      <Hsp_query-from>563</Hsp_query-from>
      <Hsp_query-to>853</Hsp_query-to>
      <Hsp_hit-from>10</Hsp_hit-from>
      <Hsp_hit-to>106</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>33</Hsp_identity>
      <Hsp_positive>63</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>97</Hsp_align-len>
      <Hsp_qseq>KVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEM</Hsp_qseq>
      <Hsp_hseq>KLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEI</Hsp_hseq>
      <Hsp_midline>K++ +GN  VGKSCL+ R+ +  + + Y++TIG+D+ +  V +  + VK+ I+D AG   F  + + +Y+ + G ++V+DV  ++SF+ +  WL E+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YLR262C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:668244:668891:-1 gene:YLR262C transcript:YLR262C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT6 description:Rab family GTPase; required for endosome-to-Golgii, intra-Golgi retrograde, and retrograde Golgi-to-ER transport; temporarily at the Golgi, dissociating into the cytosol on arrival of the late Golgi GTPase Ypt32p; Golgi-localized form is GTP bound, while cytosolic form is GDP-bound; required for delivery of Atg9p to the phagophore assembly site during autophagy under heat stress, with Ypt6p for starvation induced autophagy and for the CVT pathway; homolog of mammalian Rab6 [Source:SGD;Acc:S000004252]</Hit_def>
  <Hit_accession>YLR262C</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>79.7221</Hsp_bit-score>
      <Hsp_score>195</Hsp_score>
      <Hsp_evalue>6.74435e-18</Hsp_evalue>
      <Hsp_query-from>548</Hsp_query-from>
      <Hsp_query-to>919</Hsp_query-to>
      <Hsp_hit-from>6</Hsp_hit-from>
      <Hsp_hit-to>126</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>76</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>125</Hsp_align-len>
      <Hsp_qseq>KSL-RVKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLVVVCANKT</Hsp_qseq>
      <Hsp_hseq>KSLTKYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERG----DENVILCIVGNKS</Hsp_hseq>
      <Hsp_midline>KSL + K++ +G   VGK+ LI R+    F   Y ATIGID+    +++ D+ +++ ++D AG   F  +   + +D++ A++V+D+  R SF+ +D W+ ++++E G     ++V++ +  NK+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YFL005W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:130334:130981:1 gene:YFL005W transcript:YFL005W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEC4 description:Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane [Source:SGD;Acc:S000001889]</Hit_def>
  <Hit_accession>YFL005W</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>77.0258</Hsp_bit-score>
      <Hsp_score>188</Hsp_score>
      <Hsp_evalue>6.68692e-17</Hsp_evalue>
      <Hsp_query-from>560</Hsp_query-from>
      <Hsp_query-to>955</Hsp_query-to>
      <Hsp_hit-from>21</Hsp_hit-from>
      <Hsp_hit-to>147</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>37</Hsp_identity>
      <Hsp_positive>69</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>132</Hsp_align-len>
      <Hsp_qseq>VKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLVVVCANKTLFAAIVELCDNG</Hsp_qseq>
      <Hsp_hseq>MKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEH-----ANDEAQLLLVGNKSDMETRVVTADQG</Hsp_hseq>
      <Hsp_midline>+K++ +G+  VGKSCL+ R+ E +F   ++ TIGID+ +  V +  ++VK+ ++D AG   F  +   +Y+   G +LV+DV    +F  +  W   +        + D+  +++  NK+     V   D G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YGL210W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:93792:94460:1 gene:YGL210W transcript:YGL210W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT32 description:Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication [Source:SGD;Acc:S000003178]</Hit_def>
  <Hit_accession>YGL210W</Hit_accession>
  <Hit_len>222</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>76.2554</Hsp_bit-score>
      <Hsp_score>186</Hsp_score>
      <Hsp_evalue>1.55651e-16</Hsp_evalue>
      <Hsp_query-from>563</Hsp_query-from>
      <Hsp_query-to>928</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>131</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>35</Hsp_identity>
      <Hsp_positive>68</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>122</Hsp_align-len>
      <Hsp_qseq>KVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLVVVCANKTLFA</Hsp_qseq>
      <Hsp_hseq>KIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELR-----ENADDNVAVGLIGNKSDLA</Hsp_hseq>
      <Hsp_midline>K++ +G+  VGKS L+ R+    F  +  +TIG+++    + V ++++K  I+D AG   +  + + +Y+   GAL+V+D+    S++  + WL E+R       + D+V V +  NK+  A</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YER031C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:214076:214747:-1 gene:YER031C transcript:YER031C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT31 description:Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi [Source:SGD;Acc:S000000833]</Hit_def>
  <Hit_accession>YER031C</Hit_accession>
  <Hit_len>223</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>75.8702</Hsp_bit-score>
      <Hsp_score>185</Hsp_score>
      <Hsp_evalue>1.81421e-16</Hsp_evalue>
      <Hsp_query-from>554</Hsp_query-from>
      <Hsp_query-to>928</Hsp_query-to>
      <Hsp_hit-from>12</Hsp_hit-from>
      <Hsp_hit-to>131</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>35</Hsp_identity>
      <Hsp_positive>68</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>125</Hsp_align-len>
      <Hsp_qseq>LRVKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLVVVCANKTLFA</Hsp_qseq>
      <Hsp_hseq>LLFKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELREN-----ADDNVAVGLIGNKSDLA</Hsp_hseq>
      <Hsp_midline>L  K++ +G+  VGKS L+ R+ +  F     +TIG+++    + +  + +K  I+D AG   +  + + +Y+   GAL+V+D+    S++  + WL+E+R       + D+V V +  NK+  A</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YOR089C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:490196:490828:-1 gene:YOR089C transcript:YOR089C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VPS21 description:Endosomal Rab family GTPase; required for endocytic transport and sorting of vacuolar hydrolases; required for endosomal localization of the CORVET complex; required with YPT52 for MVB biogenesis and sorting; involved in autophagy and ionic stress tolerance; geranylgeranylation required for membrane association; protein abundance increases in response to DNA replication stress; mammalian Rab5 homolog; VPS21 has a paralog, YPT53, that arose from the whole genome duplication [Source:SGD;Acc:S000005615]</Hit_def>
  <Hit_accession>YOR089C</Hit_accession>
  <Hit_len>210</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>69.3218</Hsp_bit-score>
      <Hsp_score>168</Hsp_score>
      <Hsp_evalue>2.65725e-14</Hsp_evalue>
      <Hsp_query-from>560</Hsp_query-from>
      <Hsp_query-to>964</Hsp_query-to>
      <Hsp_hit-from>8</Hsp_hit-from>
      <Hsp_hit-to>131</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>66</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>135</Hsp_align-len>
      <Hsp_qseq>VKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLVVVCANKTLFAAIVELCDNGGRR</Hsp_qseq>
      <Hsp_hseq>IKLVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKEL-HEQ----ASKDIIIALVGNK------IDMLQEGGER</Hsp_hseq>
      <Hsp_midline>+K++ +G   VGKS ++ R+    F      TIG  +   +V + +  VK  I+D AG   F  +   +Y++ Q AL+V+DV    SF     W+ E+ HE     +  D+++ +  NK      +++   GG R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YNL093W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:449868:450530:1 gene:YNL093W transcript:YNL093W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT53 description:Stress-induced Rab family GTPase; required for vacuolar protein sorting and endocytosis; involved in ionic stress tolerance; similar to Vps21p and Ypt52p; functional homolog of Vps21p; mammalian Rab5 homolog; YPT53 has a paralog, VPS21, that arose from the whole genome duplication [Source:SGD;Acc:S000005037]</Hit_def>
  <Hit_accession>YNL093W</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>68.5514</Hsp_bit-score>
      <Hsp_score>166</Hsp_score>
      <Hsp_evalue>6.42313e-14</Hsp_evalue>
      <Hsp_query-from>509</Hsp_query-from>
      <Hsp_query-to>916</Hsp_query-to>
      <Hsp_hit-from>1</Hsp_hit-from>
      <Hsp_hit-to>126</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>39</Hsp_identity>
      <Hsp_positive>66</Hsp_positive>
      <Hsp_gaps>10</Hsp_gaps>
      <Hsp_align-len>136</Hsp_align-len>
      <Hsp_qseq>MDSHNLAKRKEVRKSLRVKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLVVVCANK</Hsp_qseq>
      <Hsp_hseq>MDKHTAAI-----PTLTIKVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHEKVG-----HDIVIALVGNK</Hsp_hseq>
      <Hsp_midline>MD H  A       +L +KV+ +G   VGKS ++ R+    F      TIG  +   ++    + +K  I+D AG   F  +   +Y++ Q AL+VFDV +  SF     W+ E+  ++G      D+++ +  NK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YML001W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:267174:267800:1 gene:YML001W transcript:YML001W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT7 description:Rab family GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); interacts with the cargo selection/retromer complex for retrograde sorting; similar to mammalian Rab7 [Source:SGD;Acc:S000004460]</Hit_def>
  <Hit_accession>YML001W</Hit_accession>
  <Hit_len>208</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>67.781</Hsp_bit-score>
      <Hsp_score>164</Hsp_score>
      <Hsp_evalue>8.77848e-14</Hsp_evalue>
      <Hsp_query-from>545</Hsp_query-from>
      <Hsp_query-to>916</Hsp_query-to>
      <Hsp_hit-from>4</Hsp_hit-from>
      <Hsp_hit-to>127</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>42</Hsp_identity>
      <Hsp_positive>65</Hsp_positive>
      <Hsp_gaps>8</Hsp_gaps>
      <Hsp_align-len>128</Hsp_align-len>
      <Hsp_qseq>RKSLRVKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVR-DREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHG---SPDDVLVVVCANK</Hsp_qseq>
      <Hsp_hseq>RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSW----RDEFLVHANVNSPETFPFVILGNK</Hsp_hseq>
      <Hsp_midline>RK   +KVI +G+  VGK+ L+ RY   ++  +Y ATIG D+   +V V  D+   + ++D AG   F  +   FY+     +LV+DV +  SF+ +  W    R E   H    SP+    V+  NK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YLR293C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:720771:721430:-1 gene:YLR293C transcript:YLR293C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GSP1 description:Ran GTPase; GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; regulated by Srm1p, Rna1p, Yrb1p, Yrb2p, Yrp4p, Yrb30p, Cse1p and Kap95p; GSP1 has a paralog, GSP2, that arose from the whole genome duplication [Source:SGD;Acc:S000004284]</Hit_def>
  <Hit_accession>YLR293C</Hit_accession>
  <Hit_len>219</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>64.6994</Hsp_bit-score>
      <Hsp_score>156</Hsp_score>
      <Hsp_evalue>1.28532e-12</Hsp_evalue>
      <Hsp_query-from>563</Hsp_query-from>
      <Hsp_query-to>916</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>125</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>33</Hsp_identity>
      <Hsp_positive>65</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>118</Hsp_align-len>
      <Hsp_qseq>KVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLVVVCANK</Hsp_qseq>
      <Hsp_hseq>KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC------ENIPIVLCGNK</Hsp_hseq>
      <Hsp_midline>K++ +G+   GK+  +KR+    F  KY+ATIG++      +    E+K +++D AG   F  +R+ +Y + Q A+++FDV SR ++  +  W  ++          +++ +V+C NK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YOR185C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:681444:682106:-1 gene:YOR185C transcript:YOR185C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GSP2 description:GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication [Source:SGD;Acc:S000005711]</Hit_def>
  <Hit_accession>YOR185C</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>64.3142</Hsp_bit-score>
      <Hsp_score>155</Hsp_score>
      <Hsp_evalue>1.59224e-12</Hsp_evalue>
      <Hsp_query-from>563</Hsp_query-from>
      <Hsp_query-to>916</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>126</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>33</Hsp_identity>
      <Hsp_positive>65</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>118</Hsp_align-len>
      <Hsp_qseq>KVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLVVVCANK</Hsp_qseq>
      <Hsp_hseq>KLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVEVHPLSFYTNFGEIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC------ENIPIVLCGNK</Hsp_hseq>
      <Hsp_midline>K++ +G+   GK+  +KR+    F  KY+ATIG++      +    E+K +++D AG   F  +R+ +Y + Q A+++FDV SR ++  +  W  ++          +++ +V+C NK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YKR014C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:465367:466071:-1 gene:YKR014C transcript:YKR014C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT52 description:Endosomal Rab family GTPase; required for vacuolar protein sorting, endocytosis and multivesicular body (MVB) biogenesis and sorting; required for localization of the CORVET complex to endosomes; involved in autophagy and ionic stress tolerance; similar to Vps21p and Ypt53p; mammalian Rab5 homolog; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000001722]</Hit_def>
  <Hit_accession>YKR014C</Hit_accession>
  <Hit_len>234</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>63.929</Hsp_bit-score>
      <Hsp_score>154</Hsp_score>
      <Hsp_evalue>3.13273e-12</Hsp_evalue>
      <Hsp_query-from>554</Hsp_query-from>
      <Hsp_query-to>1027</Hsp_query-to>
      <Hsp_hit-from>2</Hsp_hit-from>
      <Hsp_hit-to>153</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>41</Hsp_identity>
      <Hsp_positive>82</Hsp_positive>
      <Hsp_gaps>24</Hsp_gaps>
      <Hsp_align-len>167</Hsp_align-len>
      <Hsp_qseq>LRVKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHV--------RDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLVVVCANKTLFAAIVELCDNGGRRPTPAV-TVGFTKEQADAIRRIR</Hsp_qseq>
      <Hsp_hseq>LQFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVG----DDDLVIYLLGNK------VDLC-----QETPSTETSPDSNEGGDEEQKVR</Hsp_hseq>
      <Hsp_midline>L+ K++ +G+  VGKS ++ R+ +  F     +TIG  +    + +        +D  +K  I+D AG   +  +   +Y++   AL+V+D+   DS      W+ E+++++G     DD+++ +  NK      V+LC     + TP+  T   + E  D  +++R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YBR264C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:737770:738369:-1 gene:YBR264C transcript:YBR264C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT10 description:Rab family GTP-binding protein; contains the PEST signal sequence specific for proteolytic enzymes; may be involved in vesicular transport; overexpression leads to accumulation of Golgi-like cisternae with budding vesicles [Source:SGD;Acc:S000000468]</Hit_def>
  <Hit_accession>YBR264C</Hit_accession>
  <Hit_len>199</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.9954</Hsp_bit-score>
      <Hsp_score>136</Hsp_score>
      <Hsp_evalue>4.63069e-10</Hsp_evalue>
      <Hsp_query-from>560</Hsp_query-from>
      <Hsp_query-to>856</Hsp_query-to>
      <Hsp_hit-from>5</Hsp_hit-from>
      <Hsp_hit-to>109</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>54</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>105</Hsp_align-len>
      <Hsp_qseq>VKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHV------RDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMR</Hsp_qseq>
      <Hsp_hseq>IKVVLLGDSSVGKTSIVTRLKSGKFLAKHAATIGAAFITKTIEVPSNDSSTEKRIHMEIWDTAGQERYKSLVPMYYRDANIALIVFELGDVSSLQCAKTWFQDLQ</Hsp_hseq>
      <Hsp_midline>+KV+ +G+  VGK+ ++ R    +F+ K+ ATIG  +    + V       ++ + + I+D AG   +  +   +Y+D   AL+VF++G   S      W  +++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YPR165W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:875368:875997:1 gene:YPR165W transcript:YPR165W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO1 description:GTP-binding protein of the rho subfamily of Ras-like proteins; involved in establishment of cell polarity; regulates protein kinase C (Pkc1p) and the cell wall synthesizing enzyme 1,3-beta-glucan synthase (Fks1p and Gsc2p) [Source:SGD;Acc:S000006369]</Hit_def>
  <Hit_accession>YPR165W</Hit_accession>
  <Hit_len>209</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.8398</Hsp_bit-score>
      <Hsp_score>133</Hsp_score>
      <Hsp_evalue>1.09925e-09</Hsp_evalue>
      <Hsp_query-from>536</Hsp_query-from>
      <Hsp_query-to>859</Hsp_query-to>
      <Hsp_hit-from>3</Hsp_hit-from>
      <Hsp_hit-to>110</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>61</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>109</Hsp_align-len>
      <Hsp_qseq>KEVRKSLRVKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDAL-DGWLAEMRH</Hsp_qseq>
      <Hsp_hseq>QQVGNSIRRKLVIVGDGACGKTCLLIVFSKGQFPEVYVPTVFENY-VADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQEKWIAEVLH</Hsp_hseq>
      <Hsp_midline>++V  S+R K++ +G+   GK+CL+  + + +F   Y+ T+  +Y V  V V  R V++ ++D AG   +  +R   Y D+   L+ F +   DS + + + W+AE+ H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YLR229C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:604212:604787:-1 gene:YLR229C transcript:YLR229C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDC42 description:Small rho-like GTPase; essential for establishment and maintenance of cell polarity; plays a role late in cell fusion via activation of key cell fusion regulator Fus2p; mutants have defects in the organization of actin and septins; human homolog CDC42 can complement yeast cdc42 mutant [Source:SGD;Acc:S000004219]</Hit_def>
  <Hit_accession>YLR229C</Hit_accession>
  <Hit_len>191</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.9138</Hsp_bit-score>
      <Hsp_score>128</Hsp_score>
      <Hsp_evalue>4.82795e-09</Hsp_evalue>
      <Hsp_query-from>560</Hsp_query-from>
      <Hsp_query-to>859</Hsp_query-to>
      <Hsp_hit-from>4</Hsp_hit-from>
      <Hsp_hit-to>103</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>52</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>101</Hsp_align-len>
      <Hsp_qseq>VKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDAL-DGWLAEMRH</Hsp_qseq>
      <Hsp_hseq>LKCVVVGDGAVGKTCLLISYTTNQFPADYVPTVFDNYAVT-VMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPPSFENVKEKWFPEVHH</Hsp_hseq>
      <Hsp_midline>+K + +G+  VGK+CL+  Y   +F   Y+ T+  +Y VT V + D    + +FD AG   +  +R   Y  T   L+ F V S  SF+ + + W  E+ H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YKR055W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:548216:549091:1 gene:YKR055W transcript:YKR055W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO4 description:Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi [Source:SGD;Acc:S000001763]</Hit_def>
  <Hit_accession>YKR055W</Hit_accession>
  <Hit_len>291</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.9138</Hsp_bit-score>
      <Hsp_score>128</Hsp_score>
      <Hsp_evalue>1.24917e-08</Hsp_evalue>
      <Hsp_query-from>491</Hsp_query-from>
      <Hsp_query-to>859</Hsp_query-to>
      <Hsp_hit-from>50</Hsp_hit-from>
      <Hsp_hit-to>173</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>30</Hsp_identity>
      <Hsp_positive>60</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>124</Hsp_align-len>
      <Hsp_qseq>SRNEEAMDSHNLAKRKEVRKSLRVKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDAL-DGWLAEMRH</Hsp_qseq>
      <Hsp_hseq>ARSLSTIPSYEQMKRTNKLPDYHLKIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVKH</Hsp_hseq>
      <Hsp_midline>+R+   + S+   KR        +K++ +G+  VGK+CL+  Y +  F   Y+ TI  +Y         + +++ ++D AG   +  +R   Y +    ++ + VGS+ S   + D W  E++H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YIL118W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:139752:140447:1 gene:YIL118W transcript:YIL118W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO3 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p [Source:SGD;Acc:S000001380]</Hit_def>
  <Hit_accession>YIL118W</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>52.373</Hsp_bit-score>
      <Hsp_score>124</Hsp_score>
      <Hsp_evalue>2.60696e-08</Hsp_evalue>
      <Hsp_query-from>545</Hsp_query-from>
      <Hsp_query-to>853</Hsp_query-to>
      <Hsp_hit-from>12</Hsp_hit-from>
      <Hsp_hit-to>114</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>55</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>104</Hsp_align-len>
      <Hsp_qseq>RKSLRVKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDAL-DGWLAEM</Hsp_qseq>
      <Hsp_hseq>NKPIERKIVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENY-IHDIFVDSKHITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQNKWVGEI</Hsp_hseq>
      <Hsp_midline> K +  K++ +G+   GK+ L+  +    F   Y  T+  +Y +  + V  + + ++++D AG   F  +R+  Y DTQ  +L F + SRDS + + + W+ E+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>17</Hit_num>
  <Hit_id>YGR152C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:794674:795492:-1 gene:YGR152C transcript:YGR152C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSR1 description:GTP-binding protein of the Ras superfamily; required for bud site selection, morphological changes in response to mating pheromone, and efficient cell fusion; localized to the plasma membrane; significantly similar to mammalian Rap GTPases [Source:SGD;Acc:S000003384]</Hit_def>
  <Hit_accession>YGR152C</Hit_accession>
  <Hit_len>272</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.2174</Hsp_bit-score>
      <Hsp_score>121</Hsp_score>
      <Hsp_evalue>8.09479e-08</Hsp_evalue>
      <Hsp_query-from>563</Hsp_query-from>
      <Hsp_query-to>916</Hsp_query-to>
      <Hsp_hit-from>5</Hsp_hit-from>
      <Hsp_hit-to>117</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>35</Hsp_identity>
      <Hsp_positive>57</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>118</Hsp_align-len>
      <Hsp_qseq>KVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLVVVCANK</Hsp_qseq>
      <Hsp_hseq>KLVVLGAGGVGKSCLTVQFVQGVYLDTYDPTIEDSYRKT-IEIDNKVFDLEILDTAGIAQFTAMRELYIKSGMGFLLVYSVTDRQSLEE----LMELREQVLRIKDSDRVPMVLIGNK</Hsp_hseq>
      <Hsp_midline>K++ +G   VGKSCL  ++ +  ++  Y  TI   Y  T + + ++   + I D AG   F  +R  + K   G LLV+ V  R S +     L E+R ++      D V +V+  NK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>18</Hit_num>
  <Hit_id>YML064C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:145139:145876:-1 gene:YML064C transcript:YML064C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEM1 description:GTP-binding protein of the Ras superfamily; involved in termination of M-phase; controls actomyosin and septin dynamics during cytokinesis [Source:SGD;Acc:S000004529]</Hit_def>
  <Hit_accession>YML064C</Hit_accession>
  <Hit_len>245</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>49.2914</Hsp_bit-score>
      <Hsp_score>116</Hsp_score>
      <Hsp_evalue>2.41346e-07</Hsp_evalue>
      <Hsp_query-from>542</Hsp_query-from>
      <Hsp_query-to>898</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>130</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>59</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>119</Hsp_align-len>
      <Hsp_qseq>VRKSLRVKVISMGNPEVGKSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLV</Hsp_qseq>
      <Hsp_hseq>VRNQVEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSIRSTDIIFSIMDLGGQREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEW---YRQAYGLNDSAIPILV</Hsp_hseq>
      <Hsp_midline>VR  + V+V  +G+ +VGK+ L+ +Y +  +  +Y  T+G+++   KV +R  ++  +I D+ G   F  +       +   + +FD+   ++  ++  W    R   G + S   +LV</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>19</Hit_num>
  <Hit_id>YOR101W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:515244:516173:1 gene:YOR101W transcript:YOR101W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAS1 description:GTPase involved in G-protein signaling in adenylate cyclase activation; plays a role in cell proliferation; localized to the plasma membrane; homolog of mammalian RAS proto-oncogenes; relative distribution to the nucleus increases upon DNA replication stress; RAS1 has a paralog, RAS2, that arose from the whole genome duplication [Source:SGD;Acc:S000005627]</Hit_def>
  <Hit_accession>YOR101W</Hit_accession>
  <Hit_len>309</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>49.6766</Hsp_bit-score>
      <Hsp_score>117</Hsp_score>
      <Hsp_evalue>3.25319e-07</Hsp_evalue>
      <Hsp_query-from>596</Hsp_query-from>
      <Hsp_query-to>916</Hsp_query-to>
      <Hsp_hit-from>23</Hsp_hit-from>
      <Hsp_hit-to>124</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>33</Hsp_identity>
      <Hsp_positive>55</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>107</Hsp_align-len>
      <Hsp_qseq>KSCLIKRYCEKRFVHKYMATIGIDYGVTKVHVRDREVKVNIFDMAGHPFFYEVRNEFYKDTQGALLVFDVGSRDSFDALDGWLAEMRHEMGPHGSPDDVLVVVCANK</Hsp_qseq>
      <Hsp_hseq>KSALTIQFIQSYFVDEYDPTIEDSY-RKQVVIDDKVSILDILDTAGQEEYSAMREQYMRTGEGFLLVYSVTSRNSFDELLSYYQQIQRVK----DSDYIPVVVVGNK</Hsp_hseq>
      <Hsp_midline>KS L  ++ +  FV +Y  TI   Y   +V + D+   ++I D AG   +  +R ++ +  +G LLV+ V SR+SFD L  +  +++         D + VVV  NK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>677845831</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>5</Iteration_iter-num>
  <Iteration_query-ID>Query_5</Iteration_query-ID>
  <Iteration_query-def>PMZ_0041026-RA transcript Note:&quot;Similar to KLF10 Krueppel-like factor 10 (Homo sapiens)&quot; offset:68 AED:0.01 eAED:0.01 QI:68|0.66|0.25|1|0.33|0.75|4|3769|618</Iteration_query-def>
  <Iteration_query-len>5694</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YPL230W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:115312:116487:1 gene:YPL230W transcript:YPL230W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:USV1 description:Putative transcription factor containing a C2H2 zinc finger; mutation affects transcriptional regulation of genes involved in growth on non-fermentable carbon sources, response to salt stress and cell wall biosynthesis; USV1 has a paralog, RGM1, that arose from the whole genome duplication [Source:SGD;Acc:S000006151]</Hit_def>
  <Hit_accession>YPL230W</Hit_accession>
  <Hit_len>391</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>57.3806</Hsp_bit-score>
      <Hsp_score>137</Hsp_score>
      <Hsp_evalue>1.0899e-08</Hsp_evalue>
      <Hsp_query-from>1502</Hsp_query-from>
      <Hsp_query-to>1645</Hsp_query-to>
      <Hsp_hit-from>37</Hsp_hit-from>
      <Hsp_hit-to>85</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>49</Hsp_align-len>
      <Hsp_qseq>REKPFRCS-WEGCERRFARSDELSRHRRAHTGEKRFACPACARRFLRSD</Hsp_qseq>
      <Hsp_hseq>RRKTFKCTGYDGCTMSFTRAEHLARHIRKHTGEKPFQCPACLKFFSRVD</Hsp_hseq>
      <Hsp_midline>R K F+C+ ++GC   F R++ L+RH R HTGEK F CPAC + F R D</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>104</Statistics_hsp-len>
      <Statistics_eff-space>3996434598</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>6</Iteration_iter-num>
  <Iteration_query-ID>Query_6</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056549-RA transcript Note:&quot;Similar to Ubr5 E3 ubiquitin-protein ligase UBR5 (Rattus norvegicus)&quot; offset:0 AED:0.52 eAED:0.53 QI:0|0|0|0.8|1|1|15|0|547</Iteration_query-def>
  <Iteration_query-len>1644</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>94</Statistics_hsp-len>
      <Statistics_eff-space>1041324818</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>7</Iteration_iter-num>
  <Iteration_query-ID>Query_7</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056550-RA transcript Note:&quot;Similar to Ubr5 E3 ubiquitin-protein ligase UBR5 (Mus musculus)&quot; offset:0 AED:0.17 eAED:0.17 QI:0|0.2|0.22|0.97|1|1|36|3966|1564</Iteration_query-def>
  <Iteration_query-len>8661</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YER125W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:410189:412618:1 gene:YER125W transcript:YER125W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSP5 description:NEDD4 family E3 ubiquitin ligase; regulates processes including: MVB sorting, the heat shock response, transcription, endocytosis and ribosome stability; ubiquitinates Sec23p, Sna3p, Ste4p, Nfi1p, Rpo21p and Sem1p; autoubiquitinates; deubiquitinated by Ubp2p; regulated by SUMO ligase Siz1p, in turn regulates Siz1p SUMO ligase activity; required for efficient Golgi-to-ER trafficking in COPI mutants; mutant tolerates aneuploidy; human homolog implicated in Liddle syndrome [Source:SGD;Acc:S000000927]</Hit_def>
  <Hit_accession>YER125W</Hit_accession>
  <Hit_len>809</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>87.0409</Hsp_bit-score>
      <Hsp_score>214</Hsp_score>
      <Hsp_evalue>2.56756e-17</Hsp_evalue>
      <Hsp_query-from>3850</Hsp_query-from>
      <Hsp_query-to>4626</Hsp_query-to>
      <Hsp_hit-from>535</Hsp_hit-from>
      <Hsp_hit-to>786</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>69</Hsp_identity>
      <Hsp_positive>128</Hsp_positive>
      <Hsp_gaps>39</Hsp_gaps>
      <Hsp_align-len>275</Hsp_align-len>
      <Hsp_qseq>AGKNTEARLNCFRNVGRILGLCLLQNE---------LCPITLNRHVIKVNWHDFAFFDPVTYESLRQLILAAQSCDADAVFKAMDLTFSIDLCKEEGGGQLCSTPMELVPGGLTAPVTPANVYEYVRKYTEYRMLVAAEQPALAMRRGVLDVLPRSALEDLTAEDFRLLVNGCGEVNVQMLISYTSFNDESGESADKLLQFKRWFWSIVEKMNMAERQDLVYFWTSSPSLPASEEGFQPMPS------ITIRPPDD-QHLPTANTCISRLYVPLY</Hsp_qseq>
      <Hsp_hseq>SGINPE-HLNYFKFIGRVVGLGVFHRRFLDAFFVGALYKMMLRKKVV---LQDMEGVDAEVYNSLNWML-------ENSIDGVLDLTFSAD---DERFGEVVT--VDLKPDGRNIEVTDGNKKEYVELYTQWRIVDRVQEQFKAFMDGFNELIPEDLVTVFDERELELLIGGIAEIDIEDWKKHTDY--RGYQESDEVIQ---WFWKCVSEWDNEQRARLLQFTTGTSRIPVN--GFKDLQGSDGPRRFTIEKAGEVQQLPKSHTCFNRVDLPQY</Hsp_hseq>
      <Hsp_midline>+G N E  LN F+ +GR++GL +             L  + L + V+     D    D   Y SL  ++        +++   +DLTFS D   +E  G++ +  ++L P G    VT  N  EYV  YT++R++   ++   A   G  +++P   +      +  LL+ G  E++++    +T +     + +D+++Q   WFW  V + +  +R  L+ F T +  +P +  GF+ +         TI    + Q LP ++TC +R+ +P Y</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YGL141W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:238353:241085:1 gene:YGL141W transcript:YGL141W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HUL5 description:Multiubiquitin chain assembly factor (E4); proteasome processivity factor that elongates polyUb chains on substrates, opposing Ubp6p, a branched polyubiquitin protease; required for retrograde transport of misfolded proteins during ERAD; required for ubiquitination of a subset of cytosolic misfolded proteins upon heat shock [Source:SGD;Acc:S000003109]</Hit_def>
  <Hit_accession>YGL141W</Hit_accession>
  <Hit_len>910</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>78.5666</Hsp_bit-score>
      <Hsp_score>192</Hsp_score>
      <Hsp_evalue>1.06087e-14</Hsp_evalue>
      <Hsp_query-from>3892</Hsp_query-from>
      <Hsp_query-to>4635</Hsp_query-to>
      <Hsp_hit-from>647</Hsp_hit-from>
      <Hsp_hit-to>890</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>66</Hsp_identity>
      <Hsp_positive>127</Hsp_positive>
      <Hsp_gaps>38</Hsp_gaps>
      <Hsp_align-len>265</Hsp_align-len>
      <Hsp_qseq>VGRILGLCLLQNELCPITLNRHVIK----------VNWHDFAFFDPVTYESLRQLILAAQSCDADAVFKAMDLTFSIDLCKEEGGGQLCSTPMELVPGGLTAPVTPANVYEYVRKYTEYRMLVAAEQPALAMRRGVLDVLPRSALEDLTAEDFRLLVNGCGE-VNVQMLIS---YTSFNDESGESADKLLQFKRWFWSIVEKMNMAERQDLVYFWTSSPSLPASEEGFQPM-PSITIRPP--DDQHLPTANTCISRLYVPLYSSR</Hsp_qseq>
      <Hsp_hseq>LGKVVGKCLYEHVLIDVSFADFFLKKLLNYSNGFLSSFSDLGSYDSVLYNNLIKLL----NMTTDEI-KSLDLTFEID--EPESSAKV----VDLIPNGSKTYVTKDNVLLYVTKVTDYKLNKRCFKPVSAFHGGLSVIIAPHWMEMFNSIELQMLISGERDNIDLDDLKSNTEYGGYKEEDQTIVD--------FWEVLNEFKFEEKLNFLKFVTSVPQAPL--QGFKALDPKFGIRNAGTEKYRLPTASTCVNLLKLPDYRNK</Hsp_hseq>
      <Hsp_midline>+G+++G CL ++ L  ++     +K           ++ D   +D V Y +L +L+    +   D + K++DLTF ID  + E   ++    ++L+P G    VT  NV  YV K T+Y++     +P  A   G+  ++    +E   + + ++L++G  + +++  L S   Y  + +E     D        FW ++ +    E+ + + F TS P  P   +GF+ + P   IR    +   LPTA+TC++ L +P Y ++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YDR457W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:1369790:1379596:1 gene:YDR457W transcript:YDR457W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TOM1 description:E3 ubiquitin ligase of the hect-domain class; has a role in mRNA export from the nucleus and may regulate transcriptional coactivators; involved in degradation of excess histones; interacts with Dia2p and is required for Dia2p degradation; required to target Cdc6p for ubiquitin-mediated destruction during G1 phase [Source:SGD;Acc:S000002865]</Hit_def>
  <Hit_accession>YDR457W</Hit_accession>
  <Hit_len>3268</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>66.6254</Hsp_bit-score>
      <Hsp_score>161</Hsp_score>
      <Hsp_evalue>7.50804e-11</Hsp_evalue>
      <Hsp_query-from>3826</Hsp_query-from>
      <Hsp_query-to>4632</Hsp_query-to>
      <Hsp_hit-from>2983</Hsp_hit-from>
      <Hsp_hit-to>3246</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>61</Hsp_identity>
      <Hsp_positive>122</Hsp_positive>
      <Hsp_gaps>33</Hsp_gaps>
      <Hsp_align-len>283</Hsp_align-len>
      <Hsp_qseq>KRGFYSLRAGKNTEARLNCFRNVGRILGLCLLQNELCPITLNRHVIK------VNWHDFAFFDPVTYESLRQLILAAQSCDADAVFKAMDLTFSIDLCKEEGGGQLCSTPMELVPGGLTAPVTPANVYEYVRKYTEYRMLVAAEQPALAMRRGVLDVLPRSALEDLTAEDFRLLVNGCGEVNVQMLISYTSFNDESGESADKLLQFKRWFWSIVEKMNMAERQDLVYFWTSSPSLPASEEGFQPMP--------SITIRPPDDQHLPTANTCISRLYVPLYSS</Hsp_qseq>
      <Hsp_hseq>KTTFHPNRTSGINPEHLSFFKFIGMIIGKAIRDQCFLDCHFSREVYKNILGRPVSLKDMESLDPDYYKSLVWIL-------ENDITDIIEETFSVE-TDDYGEHKV----INLIEGGKDIIVTEANKQDYVKKVVEYKLQTSVKEQMDNFLVGFYALISKDLITIFDEQELELLISGLPDIDVDDWKNNTTYVNYTATCKE-----VSYFWRAVRSFDAEERAKLLQFVTGTSKVPLN--GFKELSGVNGVCKFSIHRDFGSSERLPSSHTCFNQLNLPPYES</Hsp_hseq>
      <Hsp_midline>K  F+  R        L+ F+ +G I+G  +          +R V K      V+  D    DP  Y+SL  ++        + +   ++ TFS++   + G  ++    + L+ GG    VT AN  +YV+K  EY++  + ++       G   ++ +  +     ++  LL++G  +++V    + T++ + +    +       +FW  V   +  ER  L+ F T +  +P +  GF+ +         SI       + LP+++TC ++L +P Y S</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YKL010C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:421424:425875:-1 gene:YKL010C transcript:YKL010C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UFD4 description:Ubiquitin-protein ligase (E3); interacts with Rpt4p and Rpt6p, two subunits of the 19S particle of the 26S proteasome; cytoplasmic E3 involved in the degradation of ubiquitin fusion proteins; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000001493]</Hit_def>
  <Hit_accession>YKL010C</Hit_accession>
  <Hit_len>1483</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>60.077</Hsp_bit-score>
      <Hsp_score>144</Hsp_score>
      <Hsp_evalue>5.72162e-09</Hsp_evalue>
      <Hsp_query-from>3994</Hsp_query-from>
      <Hsp_query-to>4635</Hsp_query-to>
      <Hsp_hit-from>1259</Hsp_hit-from>
      <Hsp_hit-to>1462</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>54</Hsp_identity>
      <Hsp_positive>100</Hsp_positive>
      <Hsp_gaps>26</Hsp_gaps>
      <Hsp_align-len>222</Hsp_align-len>
      <Hsp_qseq>DPVTYESLRQLILAAQSCDADAVFKAMDLTFSIDLCKEEGGGQLCSTPMELVPGGLTAPVTPANVYEYVRKYTEYRMLVAAEQPALAMRRGVLDVLPRSALEDLTAEDFRLLVNGCGEVNVQMLISYTSFNDESGESADKLLQFKRWFWSIVEKMNMAERQDLVYFWTSSPSLPASEEGFQ---PMPSITIRPPDD-----QHLPTANTCISRLYVPLYSSR</Hsp_qseq>
      <Hsp_hseq>DPLLAKSLKYIV---ANKDDNMTLESLSLTFTVP----------GNDDIELIPGGCNKSLNSSNVEEYIHGVIDQILGKGIEKQLKAFIEGFSKVFSYERMLILFPDEL-VDIFGRVEEDWSMATLYTNLNAEHGYTMDSSIIHD--FISIISAFGKHERRLFLQFLTGSPKLPIG--GFKSLNPKFTVVLKHAEDGLTADEYLPSVMTCANYLKLPKYTSK</Hsp_hseq>
      <Hsp_midline>DP+  +SL+ ++    + D +   +++ LTF++            +  +EL+PGG    +  +NV EY+    +  +    E+   A   G   V     +  L  ++  + + G  E +  M   YT+ N E G + D  +     F SI+      ER+  + F T SP LP    GF+   P  ++ ++  +D     ++LP+  TC + L +P Y+S+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YJR036C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:500713:503391:-1 gene:YJR036C transcript:YJR036C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HUL4 description:Protein with similarity to hect domain E3 ubiquitin-protein ligases; not essential for viability; found in association with Trf4 in TRAMP complex [Source:SGD;Acc:S000003797]</Hit_def>
  <Hit_accession>YJR036C</Hit_accession>
  <Hit_len>892</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.9954</Hsp_bit-score>
      <Hsp_score>136</Hsp_score>
      <Hsp_evalue>4.7933e-08</Hsp_evalue>
      <Hsp_query-from>3853</Hsp_query-from>
      <Hsp_query-to>4632</Hsp_query-to>
      <Hsp_hit-from>607</Hsp_hit-from>
      <Hsp_hit-to>871</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>59</Hsp_identity>
      <Hsp_positive>117</Hsp_positive>
      <Hsp_gaps>25</Hsp_gaps>
      <Hsp_align-len>275</Hsp_align-len>
      <Hsp_qseq>GKNTEARLNCFRNVGRILGLCLLQNELCPITLNRHVIK------VNWHDFAFFDPVTYESLRQLILAAQSCDADAVFKAMDLTF-SIDLCKEEGGGQLCSTPMELVPGGLTAPVTPANVYEYVRKYTEYRMLVAAEQPALAMRRGVLDVLPR-SALEDLTAEDFRLLVNGCGE---VNVQMLISYTS----FNDESGESADKLLQFKRWFWSIVEKMNMAERQDLVYFWTSSPSLPASEEGFQPMPSITIRPPDDQHLPTANTCISRLYVPLYSS</Hsp_qseq>
      <Hsp_hseq>GKNSQLEL--YYLFGVVMGLAIFNSTILDLQFPKALYKKLCSEPLSFEDYSELFPETSRNLIKMLNYTEDNFEDVFSLTFETTYRNNNWILNDSKSSKEYVTVELCENGRNVPITQSNKHEFVMKWVEFYLEKSIEPQYNKFVSGFKRVFAECNSIKLFNSEELERLVCGDEEQTKFDFKSLRSVTKYVGGFSDDSRAVC--------WFWEIIESWDYPLQKKLLQFVTASDRIPATGISTIPFKISLLGSHDSDDLPLAHTCFNEICLWNYSS</Hsp_hseq>
      <Hsp_midline>GKN++  L  +   G ++GL +  + +  +   + + K      +++ D++   P T  +L +++   +    D      + T+ + +    +         +EL   G   P+T +N +E+V K+ E+ +  + E        G   V    ++++   +E+   LV G  E    + + L S T     F+D+S            WFW I+E  +   ++ L+ F T+S  +PA+     P     +   D   LP A+TC + + +  YSS</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>107</Statistics_hsp-len>
      <Statistics_eff-space>6137870260</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>8</Iteration_iter-num>
  <Iteration_query-ID>Query_8</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056551-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.11 eAED:0.20 QI:0|0.6|0.5|1|1|1|6|548|373</Iteration_query-def>
  <Iteration_query-len>1670</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>95</Statistics_hsp-len>
      <Statistics_eff-space>1054337887</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>9</Iteration_iter-num>
  <Iteration_query-ID>Query_9</Iteration_query-ID>
  <Iteration_query-def>PMZ_0041032-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0.12|0|9|0|772</Iteration_query-def>
  <Iteration_query-len>2319</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>97</Statistics_hsp-len>
      <Statistics_eff-space>1537134092</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>10</Iteration_iter-num>
  <Iteration_query-ID>Query_10</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056561-RA transcript Note:&quot;Similar to Ebag9 Receptor-binding cancer antigen expressed on SiSo cells (Mus musculus)&quot; offset:0 AED:0.13 eAED:0.13 QI:0|0.5|0.66|0.66|0.5|0.66|3|2944|72</Iteration_query-def>
  <Iteration_query-len>3163</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>100</Statistics_hsp-len>
      <Statistics_eff-space>2150379918</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>11</Iteration_iter-num>
  <Iteration_query-ID>Query_11</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056571-RA transcript Note:&quot;Similar to KCNB2 Potassium voltage-gated channel subfamily B member 2 (Oryctolagus cuniculus)&quot; offset:0 AED:0.05 eAED:0.12 QI:0|0|0|0.5|1|1|4|0|722</Iteration_query-def>
  <Iteration_query-len>2169</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>97</Statistics_hsp-len>
      <Statistics_eff-space>1423440742</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>12</Iteration_iter-num>
  <Iteration_query-ID>Query_12</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056572-RA transcript Note:&quot;Similar to moxd1 DBH-like monooxygenase protein 1 homolog (Danio rerio)&quot; offset:0 AED:0.09 eAED:0.12 QI:0|0.66|0.69|1|0.91|0.92|13|995|618</Iteration_query-def>
  <Iteration_query-len>2852</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>1923827617</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>13</Iteration_iter-num>
  <Iteration_query-ID>Query_13</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056573-RA transcript Note:&quot;Similar to MOXD1 DBH-like monooxygenase protein 1 (Gallus gallus)&quot; offset:0 AED:0.40 eAED:0.42 QI:0|0|0|0.27|1|1|11|0|550</Iteration_query-def>
  <Iteration_query-len>1653</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>95</Statistics_hsp-len>
      <Statistics_eff-space>1042902552</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>14</Iteration_iter-num>
  <Iteration_query-ID>Query_14</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056574-RA transcript Note:&quot;Similar to moxd1 DBH-like monooxygenase protein 1 homolog (Danio rerio)&quot; offset:0 AED:0.59 eAED:0.59 QI:0|0|0|0.33|1|1|6|0|319</Iteration_query-def>
  <Iteration_query-len>960</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>90</Statistics_hsp-len>
      <Statistics_eff-space>533615410</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>15</Iteration_iter-num>
  <Iteration_query-ID>Query_15</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056546-RA transcript Note:&quot;Similar to KRTCAP3 Keratinocyte-associated protein 3 (Homo sapiens)&quot; offset:205 AED:0.41 eAED:0.52 QI:205|0.66|0.75|1|0.33|0.25|4|0|110</Iteration_query-def>
  <Iteration_query-len>538</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>84</Statistics_hsp-len>
      <Statistics_eff-space>224168365</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>16</Iteration_iter-num>
  <Iteration_query-ID>Query_16</Iteration_query-ID>
  <Iteration_query-def>PMZ_0004954-RA transcript Note:&quot;Similar to FBXO16 F-box only protein 16 (Homo sapiens)&quot; offset:186 AED:0.21 eAED:0.22 QI:186|0.66|0.57|1|0.33|0.14|7|1565|350</Iteration_query-def>
  <Iteration_query-len>2804</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YIL046W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:268651:270573:1 gene:YIL046W transcript:YIL046W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MET30 description:F-box protein containing five copies of the WD40 motif; controls cell cycle function, sulfur metabolism, and methionine biosynthesis as part of the ubiquitin ligase complex; interacts with and regulates Met4p, localizes within the nucleus; dissociation of Met30p from SCF complex in response to cadmium stress is regulated by Cdc48p [Source:SGD;Acc:S000001308]</Hit_def>
  <Hit_accession>YIL046W</Hit_accession>
  <Hit_len>640</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>1.20763e-06</Hsp_evalue>
      <Hsp_query-from>304</Hsp_query-from>
      <Hsp_query-to>606</Hsp_query-to>
      <Hsp_hit-from>139</Hsp_hit-from>
      <Hsp_hit-to>243</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>32</Hsp_identity>
      <Hsp_positive>55</Hsp_positive>
      <Hsp_gaps>12</Hsp_gaps>
      <Hsp_align-len>109</Hsp_align-len>
      <Hsp_qseq>ELVAKWFERWTDIQRRRVLEEVLSFCSERQLRHCEALLSSALPQRALDPARALPRVLCLYIFAHLDPRSLCRAAQVCWYWRHLSESDCLWMP--------KCLRFGWSL</Hsp_qseq>
      <Hsp_hseq>HIISK-YSNSNDKIRKLILDGILSTSCFPQLSYISSLVTHMIK---IDFISILPQELSLKILSYLDCQSLCNATRVCRKWQKLADDDRVWYHMCEQHIDRKCPNCGWGL</Hsp_hseq>
      <Hsp_midline> +++K +    D  R+ +L+ +LS     QL +  +L++  +    +D    LP+ L L I ++LD +SLC A +VC  W+ L++ D +W          KC   GW L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>1887656945</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>17</Iteration_iter-num>
  <Iteration_query-ID>Query_17</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056552-RA transcript Note:&quot;Similar to Efr3a Protein EFR3 homolog A (Mus musculus)&quot; offset:0 AED:0.02 eAED:0.02 QI:0|0.8|0.66|1|0.4|0.5|6|3392|165</Iteration_query-def>
  <Iteration_query-len>3890</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>101</Statistics_hsp-len>
      <Statistics_eff-space>2685723065</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>18</Iteration_iter-num>
  <Iteration_query-ID>Query_18</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056553-RA transcript Note:&quot;Similar to EFR3B Protein EFR3 homolog B (Homo sapiens)&quot; offset:0 AED:0.36 eAED:0.45 QI:0|0|0|1|0.5|0.66|9|0|321</Iteration_query-def>
  <Iteration_query-len>966</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>90</Statistics_hsp-len>
      <Statistics_eff-space>538255544</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>19</Iteration_iter-num>
  <Iteration_query-ID>Query_19</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056554-RA transcript Note:&quot;Similar to efr3b Protein EFR3 homolog B (Danio rerio)&quot; offset:0 AED:0.46 eAED:0.46 QI:0|0|0|1|1|1|3|0|156</Iteration_query-def>
  <Iteration_query-len>471</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>82</Statistics_hsp-len>
      <Statistics_eff-space>177965025</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>20</Iteration_iter-num>
  <Iteration_query-ID>Query_20</Iteration_query-ID>
  <Iteration_query-def>PMZ_0056555-RA transcript Note:&quot;Similar to CYP8B1 7-alpha-hydroxycholest-4-en-3-one 12-alpha-hydroxylase (Oryctolagus cuniculus)&quot; offset:0 AED:0.22 eAED:0.22 QI:0|0.6|0.63|0.90|0.6|0.54|11|349|413</Iteration_query-def>
  <Iteration_query-len>1591</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>94</Statistics_hsp-len>
      <Statistics_eff-space>1000038812</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>

