<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
  <BlastOutput_program>blastx</BlastOutput_program>
  <BlastOutput_version>BLASTX 2.10.0+</BlastOutput_version>
  <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
  <BlastOutput_db>/home/smr/dbs/ensembl/release-100/Saccharomyces_cerevisiae.R64-1-1.pep.all.fa</BlastOutput_db>
  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
  <BlastOutput_query-def>PMZ_0032935-RA transcript Note:&quot;Similar to NEFM Neurofilament medium polypeptide (Gallus gallus)&quot; offset:0 AED:0.19 eAED:0.19 QI:0|0|0|0.83|0.2|0.16|6|545|719</BlastOutput_query-def>
  <BlastOutput_query-len>2705</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_matrix>BLOSUM62</Parameters_matrix>
      <Parameters_expect>1e-05</Parameters_expect>
      <Parameters_gap-open>11</Parameters_gap-open>
      <Parameters_gap-extend>1</Parameters_gap-extend>
      <Parameters_filter>L;</Parameters_filter>
    </Parameters>
  </BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
  <Iteration_iter-num>1</Iteration_iter-num>
  <Iteration_query-ID>Query_1</Iteration_query-ID>
  <Iteration_query-def>PMZ_0032935-RA transcript Note:&quot;Similar to NEFM Neurofilament medium polypeptide (Gallus gallus)&quot; offset:0 AED:0.19 eAED:0.19 QI:0|0|0|0.83|0.2|0.16|6|545|719</Iteration_query-def>
  <Iteration_query-len>2705</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>98</Statistics_hsp-len>
      <Statistics_eff-space>1820615401</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>2</Iteration_iter-num>
  <Iteration_query-ID>Query_2</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052415-RA transcript Note:&quot;Similar to INA Alpha-internexin (Homo sapiens)&quot; offset:0 AED:0.21 eAED:0.21 QI:0|0.25|0.6|0.8|1|1|5|246|322</Iteration_query-def>
  <Iteration_query-len>1215</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>92</Statistics_hsp-len>
      <Statistics_eff-space>722049371</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>3</Iteration_iter-num>
  <Iteration_query-ID>Query_3</Iteration_query-ID>
  <Iteration_query-def>PMZ_0041558-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:1.00 eAED:1.00 QI:0|-1|0|0|-1|0|1|122|139</Iteration_query-def>
  <Iteration_query-len>542</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>84</Statistics_hsp-len>
      <Statistics_eff-space>226528032</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>4</Iteration_iter-num>
  <Iteration_query-ID>Query_4</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052406-RA transcript Note:&quot;Similar to NEURL3 E3 ubiquitin-protein ligase NEURL3 (Homo sapiens)&quot; offset:0 AED:0.26 eAED:0.30 QI:0|0|0|0.4|0.75|0.8|5|0|306</Iteration_query-def>
  <Iteration_query-len>921</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>89</Statistics_hsp-len>
      <Statistics_eff-space>507213406</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>5</Iteration_iter-num>
  <Iteration_query-ID>Query_5</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052411-RA transcript Note:&quot;Similar to Myof Myoferlin (Mus musculus)&quot; offset:0 AED:0.01 eAED:0.01 QI:0|0.75|0.6|0.8|0.5|0.6|5|1876|173</Iteration_query-def>
  <Iteration_query-len>2398</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>98</Statistics_hsp-len>
      <Statistics_eff-space>1589354167</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>6</Iteration_iter-num>
  <Iteration_query-ID>Query_6</Iteration_query-ID>
  <Iteration_query-def>PMZ_0041564-RA transcript Note:&quot;Similar to myof Myoferlin (Xenopus tropicalis)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0|0.2|5|0|169</Iteration_query-def>
  <Iteration_query-len>510</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>83</Statistics_hsp-len>
      <Statistics_eff-space>205865229</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>7</Iteration_iter-num>
  <Iteration_query-ID>Query_7</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052412-RA transcript Note:&quot;Similar to Myof Myoferlin (Mus musculus)&quot; offset:0 AED:0.44 eAED:0.44 QI:0|0|0|0.08|0.82|0.87|24|0|884</Iteration_query-def>
  <Iteration_query-len>2655</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>98</Statistics_hsp-len>
      <Statistics_eff-space>1784339129</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>8</Iteration_iter-num>
  <Iteration_query-ID>Query_8</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052416-RA transcript Note:&quot;Similar to Dock1 Dedicator of cytokinesis protein 1 (Mus musculus)&quot; offset:0 AED:0.61 eAED:0.61 QI:0|0.40|0.43|0.65|1|1|23|0|1428</Iteration_query-def>
  <Iteration_query-len>4287</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YLR422W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:965897:971695:1 gene:YLR422W transcript:YLR422W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DCK1 description:Dock family protein (Dedicator Of CytoKinesis), homolog of human DOCK1; upstream component for regulation through the small GTPase Rho5p; may form a complex with Lmo1p that acts as a GEF for Rho5p; interacts with Ino4p; cytoplasmic protein that relocates to mitochondria under oxidative stress; implicated in mitophagy; not an essential protein; DOCK proteins act as guanine nucleotide exchange factors [Source:SGD;Acc:S000004414]</Hit_def>
  <Hit_accession>YLR422W</Hit_accession>
  <Hit_len>1932</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>2.4931e-06</Hsp_evalue>
      <Hsp_query-from>2782</Hsp_query-from>
      <Hsp_query-to>3186</Hsp_query-to>
      <Hsp_hit-from>1500</Hsp_hit-from>
      <Hsp_hit-to>1639</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>64</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>140</Hsp_align-len>
      <Hsp_qseq>EELAQQYETEIFDYEQLSNILRRQAKFYENIITVMRPKPDYFAVGYFGQGFPSFLRNKMFIYRGKEYERREDFEARLLAQFPNAEKMKTTSPPGENVRSAP-SQNIQCFTVQPLQRDQPKF----KNKSVNDQILNPLEN</Hsp_qseq>
      <Hsp_hseq>KDLIKAYDEINYDLNGLAFVHDQIAGIYTRLQSIDRLVPTYFKVSFMGFGFPKSLRNKSFVFEGLPFEHITSMHDRLLRSYHGSNIVHSQEEVDMLLMNPPMGKYIHVASVEPCLSISDNYNSSDKKSSINNKVRMYIEN</Hsp_hseq>
      <Hsp_midline>++L + Y+   +D   L+ +  + A  Y  + ++ R  P YF V + G GFP  LRNK F++ G  +E       RLL  +  +  + +       + + P  + I   +V+P       +    K  S+N+++   +EN</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>102</Statistics_hsp-len>
      <Statistics_eff-space>2973630509</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>9</Iteration_iter-num>
  <Iteration_query-ID>Query_9</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052419-RA transcript Note:&quot;Similar to THNSL2 Threonine synthase-like 2 (Pongo abelii)&quot; offset:181 AED:0.10 eAED:0.10 QI:181|0.57|0.5|1|0.85|0.87|8|331|391</Iteration_query-def>
  <Iteration_query-len>1688</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YCR053W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:III:216697:218241:1 gene:YCR053W transcript:YCR053W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:THR4 description:Threonine synthase; conserved protein that catalyzes formation of threonine from O-phosphohomoserine; expression is regulated by the GCN4-mediated general amino acid control pathway [Source:SGD;Acc:S000000649]</Hit_def>
  <Hit_accession>YCR053W</Hit_accession>
  <Hit_len>514</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>194.512</Hsp_bit-score>
      <Hsp_score>493</Hsp_score>
      <Hsp_evalue>7.57524e-56</Hsp_evalue>
      <Hsp_query-from>188</Hsp_query-from>
      <Hsp_query-to>994</Hsp_query-to>
      <Hsp_hit-from>8</Hsp_hit-from>
      <Hsp_hit-to>333</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>116</Hsp_identity>
      <Hsp_positive>169</Hsp_positive>
      <Hsp_gaps>57</Hsp_gaps>
      <Hsp_align-len>326</Hsp_align-len>
      <Hsp_qseq>YVSTRGAAAGS-SFREALFSGYAVDGGLFMPEEVPRVSADTL-RQWRALSYPQLVQNICSLYISPDEIPVQELGALIERALSRFAHSEVVTFKRL----RDGLNVLELFHGPTMAFKDLAMCCLAQFILYFLQK--------EDKHVTIV---VGD--------LRGAKRADVVVLLPAGRCSRVQELHMTTAMEENVHVFTVEGSSDDLDEPIRRLFADSEFSSRHGVISINSINWGRVLVQVAHHFYAYFRCTDXXXXXX--------------------------------XAENDVVHRALRSGDFSVDGAVKPSLASAIDI</Hsp_qseq>
      <Hsp_hseq>YRSTRSSSPKTISFEEAIIQGLATDGGLFIPPTIPQVDQATLFNDWSKLSFQDLAFAIMRLYIAQEEIPDADLKDLIKRSYSTFRSDEVTPLVQNVTGDKENLHILELFHGPTYAFKDVALQFVGNLFEYFLQRTNANLPEGEKKQITVVGATSGDTGSAAIYGLRGKKDVSVFILYPTGRISPIQEEQMTTVPDENVQTLSVTGTFDNCQDIVKAIFGDKEFNSKHNVGAVNSINWARILAQMTYYFYSFFQATNGKDSKKVKFVVPSGNFGDILAGYFAKKMGLPIEKLAIATNENDILDRFLKSGLYERSDKVAATLSPAMDI</Hsp_hseq>
      <Hsp_midline>Y STR ++  + SF EA+  G A DGGLF+P  +P+V   TL   W  LS+  L   I  LYI+ +EIP  +L  LI+R+ S F   EV    +     ++ L++LELFHGPT AFKD+A+  +     YFLQ+        E K +T+V    GD        LRG K   V +L P GR S +QE  MTT  +ENV   +V G+ D+  + ++ +F D EF+S+H V ++NSINW R+L Q+ ++FY++F+ T+G                                       END++ R L+SG +     V  +L+ A+DI</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>95</Statistics_hsp-len>
      <Statistics_eff-space>1068060289</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>10</Iteration_iter-num>
  <Iteration_query-ID>Query_10</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052422-RA transcript Note:&quot;Similar to pif1 ATP-dependent DNA helicase PIF1 (Xenopus laevis)&quot; offset:100 AED:0.19 eAED:0.19 QI:100|0.66|0.5|1|1|1|10|2553|446</Iteration_query-def>
  <Iteration_query-len>3994</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YHR031C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VIII:170799:172970:-1 gene:YHR031C transcript:YHR031C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RRM3 description:DNA helicase involved in rDNA replication and Ty1 transposition; binds to and suppresses DNA damage at G4 motifs in vivo; relieves replication fork pauses at telomeric regions; structurally and functionally related to Pif1p [Source:SGD;Acc:S000001073]</Hit_def>
  <Hit_accession>YHR031C</Hit_accession>
  <Hit_len>723</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>76.2554</Hsp_bit-score>
      <Hsp_score>186</Hsp_score>
      <Hsp_evalue>1.87842e-14</Hsp_evalue>
      <Hsp_query-from>842</Hsp_query-from>
      <Hsp_query-to>1261</Hsp_query-to>
      <Hsp_hit-from>378</Hsp_hit-from>
      <Hsp_hit-to>515</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>73</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>141</Hsp_align-len>
      <Hsp_qseq>LPPLSTIATASTGPFVLAYVQAKSWRRCVHLAMELTQVHRQKDQAFIRVLQMVRTGRCTDEVTRCLVATKDNAIEKDGILATRLCTHRDDVQLINTCQLAKLPGETHMFDALDSDPSQAKA-LDAMCPVEASLQLRRGAQA</Hsp_qseq>
      <Hsp_hseq>LPPVAKKDEHNVVKFCF---ESEMWKRCIQKTILLTKVFRQQDNKLIDILNAIRYGELTVDIAKTIRNLNRDIDYADGIAPTELYATRREVELSNVKKLQSLPGDLYEFKAVDNAPERYQAILDSSLMVEKVVALKEDAQV</Hsp_hseq>
      <Hsp_midline>LPP++     +   F     +++ W+RC+   + LT+V RQ+D   I +L  +R G  T ++ + +     +    DGI  T L   R +V+L N  +L  LPG+ + F A+D+ P + +A LD+   VE  + L+  AQ </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YML061C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:148953:151532:-1 gene:YML061C transcript:YML061C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PIF1 description:DNA helicase, potent G-quadruplex DNA binder/unwinder; possesses strand annealing activity; promotes DNA synthesis during break-induced replication; important for crossover recombination; translation from different start sites produces mitochondrial and nuclear forms; nuclear form is a catalytic inhibitor of telomerase; mitochondrial form involved in DNA repair and recombination; mutations affect Zn, Fe homeostasis; regulated by Rad53p-dependent phosphorylation in rho0 cells [Source:SGD;Acc:S000004526]</Hit_def>
  <Hit_accession>YML061C</Hit_accession>
  <Hit_len>859</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>67.3958</Hsp_bit-score>
      <Hsp_score>163</Hsp_score>
      <Hsp_evalue>1.05981e-11</Hsp_evalue>
      <Hsp_query-from>842</Hsp_query-from>
      <Hsp_query-to>1411</Hsp_query-to>
      <Hsp_hit-from>382</Hsp_hit-from>
      <Hsp_hit-to>568</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>55</Hsp_identity>
      <Hsp_positive>92</Hsp_positive>
      <Hsp_gaps>23</Hsp_gaps>
      <Hsp_align-len>200</Hsp_align-len>
      <Hsp_qseq>LPPLSTIATASTGPFVLAYVQAKSWRRCVHLAMELTQVHRQK-DQAFIRVLQMVRTGRCTDEVTRCLVATKDNAIEKDGILATRLCTHRDDVQLINTCQLAKLPGETHMFDALDSDPSQAKAL------DAMCPVEASLQLRRGAQAYVALSRARSLQG---LRVVDFDPCVVRADPDVLRFYAALRREAPLTQGSLNNW</Hsp_qseq>
      <Hsp_hseq>LPPVSK---DPNRPTKFAF-ESKAWKEGVKMTIMLQKVFRQRGDVKFIDMLNRMRLGNIDDETEREFKKL-SRPLPDDEIIPAELYSTRMEVERANNSRLSKLPGQVHIFNAIDGGALEDEELKERLLQNFLAPKE--LHLKVGAQVMMVKNLDATLVNGSLGKVIEF------MDPETYFCYEALTNDPSMPPEKLETW</Hsp_hseq>
      <Hsp_midline>LPP+S        P   A+ ++K+W+  V + + L +V RQ+ D  FI +L  +R G   DE  R         +  D I+   L + R +V+  N  +L+KLPG+ H+F+A+D    + + L      + + P E  L L+ GAQ  +  +   +L      +V++F       DP+    Y AL  +  +    L  W</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>9.39459e-06</Hsp_evalue>
      <Hsp_query-from>722</Hsp_query-from>
      <Hsp_query-to>880</Hsp_query-to>
      <Hsp_hit-from>235</Hsp_hit-from>
      <Hsp_hit-to>291</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>VSLSQEQRAVLEAVMARKNIFFTGSAGTGKSFLLRRIMGTLPPL----STIATASTG</Hsp_qseq>
      <Hsp_hseq>ICLSKEQESIIKLAENGHNIFYTGSAGTGKSILLREMIKVLKGIYGRENVAVTASTG</Hsp_hseq>
      <Hsp_midline>+ LS+EQ ++++      NIF+TGSAGTGKS LLR ++  L  +    +   TASTG</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>101</Statistics_hsp-len>
      <Statistics_eff-space>2764384410</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>11</Iteration_iter-num>
  <Iteration_query-ID>Query_11</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052426-RA transcript Note:&quot;Similar to ccnj Cyclin-J (Xenopus laevis)&quot; offset:200 AED:0.01 eAED:0.01 QI:200|0.83|0.85|1|0.5|0.28|7|1087|418</Iteration_query-def>
  <Iteration_query-len>2544</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YGR109C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:705359:706501:-1 gene:YGR109C transcript:YGR109C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLB6 description:B-type cyclin involved in DNA replication during S phase; activates Cdc28p to promote initiation of DNA synthesis; functions in formation of mitotic spindles along with Clb3p and Clb4p; most abundant during late G1; CLB6 has a paralog, CLB5, that arose from the whole genome duplication [Source:SGD;Acc:S000003341]</Hit_def>
  <Hit_accession>YGR109C</Hit_accession>
  <Hit_len>380</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.8398</Hsp_bit-score>
      <Hsp_score>133</Hsp_score>
      <Hsp_evalue>1.16477e-08</Hsp_evalue>
      <Hsp_query-from>225</Hsp_query-from>
      <Hsp_query-to>848</Hsp_query-to>
      <Hsp_hit-from>118</Hsp_hit-from>
      <Hsp_hit-to>325</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>55</Hsp_identity>
      <Hsp_positive>97</Hsp_positive>
      <Hsp_gaps>40</Hsp_gaps>
      <Hsp_align-len>228</Hsp_align-len>
      <Hsp_qseq>GELADDIYRVLREKELS-LPR----FCARSP---QLHLRRYFVDLLATLSEHLQLSVATHHLAISMLDMFMDRHNITVRCLYTCSICCLIIAAKFEE-KIEQVPRLDWVN----------RLEFMLLRTFNWNLCMPTAAHYVDYFLWLTQREDTSAGGSNGHQQSSLSYQHAYMIKYMAHF-LQLSLQDHVFLSFRPSVVAAASIALARMGVKLASAWTLHMQHCTG</Hsp_qseq>
      <Hsp_hseq>AEYTDSIFSHLYEKEIQMLPTHNYLMDTQSPYHLKSSMRALLIDWLVEVHEKFHCLPETLFLAINLLDRFLSQNVVKLNKLQLLCITCLFIACKFEEVKLPKITNFAYVTDGAATVEGIRKAELFVLSSLGYNISLPNPLNFI--------------------RRISKADNYCIETRNMAKFIMEYSICCNKFIHLKPSYLAAMSMYIARKIKNENSKWDETFIHYSG</Hsp_hseq>
      <Hsp_midline> E  D I+  L EKE+  LP        +SP   +  +R   +D L  + E       T  LAI++LD F+ ++ + +  L    I CL IA KFEE K+ ++    +V           + E  +L +  +N+ +P   +++                    ++ S +  +    + MA F ++ S+  + F+  +PS +AA S+ +AR      S W     H +G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YLR210W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:562008:563390:1 gene:YLR210W transcript:YLR210W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLB4 description:B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the G2/M transition; may be involved in DNA replication and spindle assembly; accumulates during S phase and G2, then targeted for ubiquitin-mediated degradation; CLB4 has a paralog, CLB3, that arose from the whole genome duplication [Source:SGD;Acc:S000004200]</Hit_def>
  <Hit_accession>YLR210W</Hit_accession>
  <Hit_len>460</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.9138</Hsp_bit-score>
      <Hsp_score>128</Hsp_score>
      <Hsp_evalue>6.78912e-08</Hsp_evalue>
      <Hsp_query-from>228</Hsp_query-from>
      <Hsp_query-to>896</Hsp_query-to>
      <Hsp_hit-from>206</Hsp_hit-from>
      <Hsp_hit-to>426</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>57</Hsp_identity>
      <Hsp_positive>104</Hsp_positive>
      <Hsp_gaps>18</Hsp_gaps>
      <Hsp_align-len>231</Hsp_align-len>
      <Hsp_qseq>ELADDIYRVLREKELSL---PRFCARSPQLH--LRRYFVDLLATLSEHLQLSVATHHLAISMLDMFMDRHNITVRCLYTCSICCLIIAAKFEEKIEQVPRLDWVNRLEFMLLRTFNWNLCMPTAAHYVDYFLWLTQREDTSAGGSNGHQQSSLSYQHAYMIKYMAHF-LQLSLQDHVFLSFRPSVVAAASIALARMGVKLASAWTLHMQHCTGLAWEMLLPCVSQLI--CK</Hsp_qseq>
      <Hsp_hseq>EYASDIFYYLRELEVKYRPNPYYMQNQVELTWPFRRTMIDWLVQLHFRFQLLPETLYLTINIVDRFLSKKTVTLNRFQLVGVSALFIAAKFEEI--NCPTLD---DLVYMLENTYTRDDIIRAEQYMIDTL----EFEIGWPGPMPFLRRISKADDYDFEPRTLAKYLLETTIVEPKLVAAAPSWLAAGAYFLSRT-ILGSNDWSLKHVFYSGYTSSQIIPLASLILENCK</Hsp_hseq>
      <Hsp_midline>E A DI+  LRE E+     P +     +L    RR  +D L  L    QL   T +L I+++D F+ +  +T+       +  L IAAKFEE     P LD    L +ML  T+  +  +    + +D      + E    G     ++ S +  + +  + +A + L+ ++ +   ++  PS +AA +  L+R  +  ++ W+L     +G     ++P  S ++  CK</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YPR119W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:771653:773128:1 gene:YPR119W transcript:YPR119W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CLB2 description:B-type cyclin involved in cell cycle progression; activates Cdc28p to promote the transition from G2 to M phase; accumulates during G2 and M, then targeted via a destruction box motif for ubiquitin-mediated degradation by the proteasome; CLB2 has a paralog, CLB1, that arose from the whole genome duplication [Source:SGD;Acc:S000006323]</Hit_def>
  <Hit_accession>YPR119W</Hit_accession>
  <Hit_len>491</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>2.56491e-07</Hsp_evalue>
      <Hsp_query-from>228</Hsp_query-from>
      <Hsp_query-to>956</Hsp_query-to>
      <Hsp_hit-from>228</Hsp_hit-from>
      <Hsp_hit-to>455</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>61</Hsp_identity>
      <Hsp_positive>108</Hsp_positive>
      <Hsp_gaps>47</Hsp_gaps>
      <Hsp_align-len>259</Hsp_align-len>
      <Hsp_qseq>ELADDIYRVLREKE-LSLPRF--CARSPQLHLRR-YFVDLLATLSEHLQLSVATHHLAISMLDMFMDRHNITVRCLYTCSICCLIIAAKFEE-----------KIEQVPRLDWVNRLEFMLLRTFNWNLCMPTAAHYVDYFLWLTQREDTSAGGSNGHQQSSLSYQHAYMIKYMAHFLQLSLQDHVFLSFRPSVVAAASIALARMGVKLASAWTLHMQHCT-GLAWEMLLPCVSQLICKYNFNSKQVMEFKEKPAVHSE</Hsp_qseq>
      <Hsp_hseq>EYVNDIFEYLHQLEVITLPKKEDLYQHRNIHQNRDILVNWLVKIHNKFGLLPETLYLAINIMDRFLGKELVQLDKLQLVGTSCLFIASKYEEVYSPSIKHFASETDGACTEDEIKEGEKFILKTLKFNLNYPNPMN----FLRRISKAD------------DYDIQSRTLAKFL---LEISLVDFRFIGILPSLCAAAAMFMSRKMLG-KGKWDGNLIHYSGGYTKEELAP-----VC------HMIMDYLVSPIVHDE</Hsp_hseq>
      <Hsp_midline>E  +DI+  L + E ++LP+     +   +H  R   V+ L  +     L   T +LAI+++D F+ +  + +  L      CL IA+K+EE           + +     D +   E  +L+T  +NL  P   +    FL    + D                Q   + K++   L++SL D  F+   PS+ AAA++ ++R  +     W  ++ H + G   E L P     +C        +M++   P VH E</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>98</Statistics_hsp-len>
      <Statistics_eff-space>1700450250</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>12</Iteration_iter-num>
  <Iteration_query-ID>Query_12</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052427-RA transcript Note:&quot;Similar to BTAF1 TATA-binding protein-associated factor 172 (Homo sapiens)&quot; offset:0 AED:0.13 eAED:0.13 QI:0|0|0|1|0.91|0.91|35|0|1736</Iteration_query-def>
  <Iteration_query-len>5211</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YPL082C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:398480:404083:-1 gene:YPL082C transcript:YPL082C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MOT1 description:Essential protein involved in regulation of transcription; removes Spt15p (TBP) from DNA via its C-terminal ATPase activity; may have a role in ensuring that soluble TBP is available to bind TATA-less promoters; forms a complex with TBP that binds TATA DNA with high affinity but with altered specificity; the Mot1p-Spt15p-DNA ternary complex contains unbent DNA; coregulates transcription with Spt16p through assembly of preinitiation complex and organization of nucleosomes [Source:SGD;Acc:S000006003]</Hit_def>
  <Hit_accession>YPL082C</Hit_accession>
  <Hit_len>1867</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>788.489</Hsp_bit-score>
      <Hsp_score>2035</Hsp_score>
      <Hsp_evalue>0</Hsp_evalue>
      <Hsp_query-from>2329</Hsp_query-from>
      <Hsp_query-to>5208</Hsp_query-to>
      <Hsp_hit-from>919</Hsp_hit-from>
      <Hsp_hit-to>1867</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>454</Hsp_identity>
      <Hsp_positive>632</Hsp_positive>
      <Hsp_gaps>109</Hsp_gaps>
      <Hsp_align-len>1009</Hsp_align-len>
      <Hsp_qseq>ACAVVAMRSLPDKMNPVIKPLMEAVRREENVL--------VSQLLQQCVGRSPCP-NQKIVKNLCNSACIDSVQTPAAACPIPSSNDTSKGSSQEKEKLQHSVNKLQGIITLYRAQKAAFSITXXXXXXXXXXXXXXXEIAHGSLPEGDQAQKSNLVQRRGAELTLASIAKHLGMEMHTVLPYLWEAMLGPLVKQVDPVHFSREELLAGGDVQAQDLINALQVFEILTPALSAELHP-QIVEQLPRLCACLQHPYTVARHMAARCLSVLSKLVTVTTMNVQLEIVLPWLGAVDNDTKREGAIEALACVMDALDVDIXXXXXXXXXXXXGRMSDQTGSVRLMATQCFATLIRLMPLEAGIPDPPFMSQELASQKVRERHFLEQLLDGSKLDNYAIPVPIHAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPSERIRLQRYIKNHNLVVASYDVVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDV---------------------RLYEDFARSQAKHDLDDTISSGKLSSEPSDKTKLKATGHVFQALQYLRKLCNHPALVLTLQHPEFQRICEELATHGSSLRDIQHAPKLSALKQXXXXXXXXXXXXXXXVDSGP----EAVVAQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDNASLQSMGTEQLLDLFTLEKGGLSEDAPSSGGASK---------KET-----IKSVLENLGDLWDQEQYDSEYNLDSFIKSLK</Hsp_qseq>
      <Hsp_hseq>ASSILLFDGLPLKLNPIIRSLMDSVKEERNEKLQTMAGESVVHLIQQLLENNKVNVSGKIVKNLCGFLCVDTSEVPDFSV-----------NAEYKEK----------ILTLIKESNS---------------IAAQDDINLAKMSEEAQ------LKRKGGLITLKILFEVLGPSILQKLPQLRSILFDSLSDH------ENEEASKVDNEQGQKIVDSFGVLRALFPFMSDSLRSSEVFTRFPVLLTFLRSNLSVFRYSAARTFADLAKISSVEVMAYTIREILPLMNSAGSLSDRQGSTELIYHLSLSMETDVLPYVIFLIVPLLGRMSDSNEDVRNLATTTFASIIKLVPLEAGIADPKGLPEELVASRERERDFIQQMMDPSKAKPFKLPIAIKATLRKYQQDGVNWLAFLNKYHLHGILCDDMGLGKTLQTICIIASDQYLRKEDYEKTRSVESRALPSLIICPPSLTGHWENEFDQYAP--FLKVVVYAGGPTVRLTLRPQLSDADIIVTSYDVARNDLAVLNKTEYNYCVLDEGHIIKNSQSKLAKAVKEITANHRLILTGTPIQNNVLELWSLFDFLMPGFLGTEKMFQERFAKPIAASRNSKTSSKEQEAGVLALEALHKQVLPFMLRRLKEDVLSDLPPKIIQDYYCELGDLQKQLYMDFTKKQK-----NVVEKDIENSEIADGKQ-----HIFQALQYMRKLCNHPALVLSPNHPQLAQVQDYLKQTGLDLHDIINAPKLSALRTLLFECGIGEEDIDKKASQDQNFPIQNVISQHRALIFCQLKDMLDMVENDLFKKYMPSVTYMRLDGSIDPRDRQKVVRKFNEDPSIDCLLLTTKVGGLGLNLTGADTVIFVEHDWNPMNDLQAMDRAHRIGQKKVVNVYRIITKGTLEEKIMGLQKFKMNIASTVVNQQNSGLASMDTHQLLDLFDPDNVTSQDNEEKNNGDSQAAKGMEDIANETGLTGKAKEALGELKELWDPSQYEEEYNLDTFIKTLR</Hsp_hseq>
      <Hsp_midline>A +++    LP K+NP+I+ LM++V+ E N          V  L+QQ +  +    + KIVKNLC   C+D+ + P  +            +++ KEK          I+TL +   +                 A  +I    + E  Q      ++R+G  +TL  + + LG  +   LP L   +   L           EE     + Q Q ++++  V   L P +S  L   ++  + P L   L+   +V R+ AAR  + L+K+ +V  M   +  +LP + +  + + R+G+ E +  +  +++ D++PY++ L+VP++GRMSD    VR +AT  FA++I+L+PLEAGI DP  + +EL + + RER F++Q++D SK   + +P+ I A LRKYQQDGVNWL+FLNKY LHGILCDDMGLGKTLQ+ICI+A D YLR ++YE+T++ +   LPS+++CPP+LTGHW +E  ++ P  FL  + Y G P+ R+ L+  + + +++V SYDV RND+      ++NYC+LDEGH+IKN ++KL+KAVK++TANHRLIL+GTPIQNNVLELWSLFDFLMPGFLGTE  F  R+ KPI ASR++++SS+EQEAGVLA+EALH+QVLPF+LRR+KEDV                     +LY DF + Q      + +     +SE +D  +     H+FQALQY+RKLCNHPALVL+  HP+  ++ + L   G  L DI +APKLSAL+ LL +CG+G                + V++QHR LIFCQLK MLDMVENDL +  +P+VTY+RLDGS+    R  +V +FN DPSID LLLTT VGGLGLNLTGADTV+FVEHDWNPM DLQAMDRAHRIGQK+VVNVYR+IT+GTLEEKIMGLQKFK++IA+TV+NQ N+ L SM T QLLDLF  +     ++   + G S+          ET      K  L  L +LWD  QY+ EYNLD+FIK+L+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>125.561</Hsp_bit-score>
      <Hsp_score>314</Hsp_score>
      <Hsp_evalue>4.82853e-29</Hsp_evalue>
      <Hsp_query-from>781</Hsp_query-from>
      <Hsp_query-to>2115</Hsp_query-to>
      <Hsp_hit-from>337</Hsp_hit-from>
      <Hsp_hit-to>832</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>129</Hsp_identity>
      <Hsp_positive>218</Hsp_positive>
      <Hsp_gaps>71</Hsp_gaps>
      <Hsp_align-len>506</Hsp_align-len>
      <Hsp_qseq>EEIEEQHQQWLEDLAIRLLCVFALDRFGDFVSDEVVAPVRETCAQTLGVVLRHMRAEGVLGATRVLLQLLGQEQ---------WED-------------------LIEALLPRTLPVVIEGLQDMDDDPMPSASTRTRRHLVHDGIRRCTWQIPVIMNTLWDSLLEL-DDLTASTNSIMTLLSSLLIYPAVRLNSMQQ---------SFTVLVPRVWPFLRHNSSSVRKAALETLNTILSTQDSQSCSLWLTPILQDMMRFIYQVAILESSQDICYLVQKVWQELLAKAPLQYIVAAACPWMGAWLCLMMQPSHMPI---DPNMLMETRARAKDKCNVKARPGQ-------------PVREVRHEYIAGSETVHEDPTSRDYHVMRTRLLNARLLGALSCCISHPSVNLASQEIRPAESLAQLLLFYLNSKSALQRIAVSLVISEWADHKQDCTTVSDAVRPRLQAVLSEQLY-------YDEIAVPFTRMQTECKQLVSVLLEGG</Hsp_qseq>
      <Hsp_hseq>EENNLRNSRSLEDLASRLLTVFALDRFGDYVYDTVVAPVRESVAQTLAALLIHLDSTLSIKIFNCLEQLVLQDPLQTGLPNKIWEATHGGLLGIRYFVSIKTNFLFAHGLLENVVRIVLYGLNQSDDD-VQSVAASILTPITSEFVKLNNSTIEILVTTIWSLLARLDDDISSSVGSIMDLLAKLCDHQEV-LDILKNKALEHPSEWSFKSLVPKLYPFLRHSISSVRRAVLNLLIAFLSIKDD-STKNWLN---GKVFRLVFQNILLEQNPELLQLSFDVYVALLEHYKVKHTEKTLDHVFSKHLQPILHLLNTPVGEKGKNYAMESQYILKPSQHYQLHPEKKRSISETTTDSDIPIPKNNEHINIDAPMIAGDITLLGLDV----ILNTRIMGAKAFALTLSMFQDSTLQSFFTNVLVRCLELPFSTPRMLAGIIVSQFCSSWLQKHPEGEKLPSFVSEIFSPVMNKQLLNRDEFPVFRELVPSLKALRTQCQSLLATFVDVG</Hsp_hseq>
      <Hsp_midline>EE   ++ + LEDLA RLL VFALDRFGD+V D VVAPVRE+ AQTL  +L H+ +   +     L QL+ Q+          WE                        LL   + +V+ GL   DDD + S +      +  + ++     I +++ T+W  L  L DD+++S  SIM LL+ L  +  V L+ ++          SF  LVP+++PFLRH+ SSVR+A L  L   LS +D  S   WL      + R ++Q  +LE + ++  L   V+  LL    +++            L  ++   + P+     N  ME++   K   + +  P +             P+ +        +  +  D T     V    +LN R++GA +  ++      ++ +      L + L    ++   L  I VS   S W     +   +   V      V+++QL        + E+      ++T+C+ L++  ++ G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YJR035W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:497355:500612:1 gene:YJR035W transcript:YJR035W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAD26 description:Protein involved in transcription-coupled nucleotide excision repair; repairs UV-induced DNA lesions; recruitment to DNA lesions is dependent on an elongating RNA polymerase II; homolog of human CSB protein [Source:SGD;Acc:S000003796]</Hit_def>
  <Hit_accession>YJR035W</Hit_accession>
  <Hit_len>1085</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>230.72</Hsp_bit-score>
      <Hsp_score>587</Hsp_score>
      <Hsp_evalue>5.85596e-62</Hsp_evalue>
      <Hsp_query-from>3472</Hsp_query-from>
      <Hsp_query-to>5175</Hsp_query-to>
      <Hsp_hit-from>287</Hsp_hit-from>
      <Hsp_hit-to>857</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>200</Hsp_identity>
      <Hsp_positive>302</Hsp_positive>
      <Hsp_gaps>111</Hsp_gaps>
      <Hsp_align-len>625</Hsp_align-len>
      <Hsp_qseq>YAIPVPIHAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCP-----------------REF------LNPLHYTGPPSE----------RIR------------LQRYIKNHNLVVASYDVVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDVR----------LYEDFARSQAKHDLDDTISSGKLSSEPSDKTKLKATGHVFQALQYLRKLCNHPALVLTLQHPEFQRICEELATHGSSLRDIQHAPKLSALKQXXXXXXXXXXXXXXXVDSGPEAVVAQHRVLIFCQLKSMLDMVEN--DLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDNASLQSMGTEQLLDLFTLEKGGLSEDAPSSGGASKKETIKSVLENLGDLWDQEQYDSE</Hsp_qseq>
      <Hsp_hseq>FKIPGEIYSLLFNYQKTCVQWLYELYQQNCGGIIGDEMGLGKTIQVIAFIAALHH-----------SGLLTGPVLIVCPATVMKQWCNEFQHWWPPLRTVILHSMGSGMASDQKFKMDENDLENLIMNSKPSDFSYEDWKNSTRTKKALESSYHLDKLIDKVVTDGHILITTYVGLRIHSDKLLKVKWQYAVLDEGHKIRNPDSEISLTCKKLKTHNRIILSGTPIQNNLTELWSLFDFIFPGKLGTLPVFQQQFVIPINIGGYANATNIQVQTGYKCAVALRDLISPYLLRRVKADVAKDLPQKKEMVLFCKLTKYQRSKYL-EFLHSSDLNQIQNGKR------NVLFGIDILRKICNHPDL-----------LDRDTKRHNPDYGDPKRSGKMQVVKQLLLLWHKQG-----------------YKALLFTQSRQMLDILEEFISTKDPDLSHLNYLRMDGTTNIKGRQSLVDRFNNE-SFDVFLLTTRVGGLGVNLTGANRIIIFDPDWNPSTDMQARERAWRIGQKREVSIYRLMVGGSIEEKIYHRQIFKQFLTNRILT-DPKQKRFFKIHELHDLFSL--GG--ENGYST--EELNEEVQKHTENLKNSKSEESDDFE</Hsp_hseq>
      <Hsp_midline>+ IP  I++ L  YQ+  V WL  L +    GI+ D+MGLGKT+Q I  +A  H+           +   T P ++VCP T+   W +E   + P                 ++F      L  L     PS+          R +            + + + + ++++ +Y  +R   D    +KW Y +LDEGH I+N  +++S   K+L  ++R+ILSGTPIQNN+ ELWSLFDF+ PG LGT   F  ++  PI     A +++ + + G     AL   + P+LLRR+K DV           L+    + Q    L + + S  L+   + K       +V   +  LRK+CNHP L           +  +   H     D + + K+  +KQLLL     G                 ++ L+F Q + MLD++E       P L  + YLR+DG+     R S+V RFNN+ S DV LLTT VGGLG+NLTGA+ ++  + DWNP  D+QA +RA RIGQKR V++YRL+  G++EEKI   Q FK  + N ++  D    +     +L DLF+L  GG  E+  S+      E ++   ENL +   +E  D E</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YBR245C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:708150:711539:-1 gene:YBR245C transcript:YBR245C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ISW1 description:ATPase subunit of imitation-switch (ISWI) class chromatin remodelers; with Ioc3p forms Isw1a complex involved in repression of transcription initiation; with Ioc2p and Ioc4p forms Isw1b complex involved in regulation of transcription elongation; Isw1b recruited to ORFs by H3K36 methylation and acts with Chd1p to prevent trans-histone exchange over coding regions; Isw1p import into nucleus depends on C-terminal bipartite nuclear targeting signal KRIR X19 KKAK [Source:SGD;Acc:S000000449]</Hit_def>
  <Hit_accession>YBR245C</Hit_accession>
  <Hit_len>1129</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>228.024</Hsp_bit-score>
      <Hsp_score>580</Hsp_score>
      <Hsp_evalue>4.99514e-61</Hsp_evalue>
      <Hsp_query-from>3481</Hsp_query-from>
      <Hsp_query-to>5016</Hsp_query-to>
      <Hsp_hit-from>189</Hsp_hit-from>
      <Hsp_hit-to>659</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>185</Hsp_identity>
      <Hsp_positive>262</Hsp_positive>
      <Hsp_gaps>83</Hsp_gaps>
      <Hsp_align-len>533</Hsp_align-len>
      <Hsp_qseq>PVPIHAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPSERIRL-QRYIK--NHNLVVASYDVVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDVR----------LYEDFARSQAK-------HDLDDTISSGKLSSEPSDKTKLKATGHVFQALQYLRKLCNHPALVLTLQHPEFQRICEELATHGSSLRDIQHAPKLSALKQXXXXXXXXXXXXXXXVDSGPEAVVAQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNN-DPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDNASLQ</Hsp_qseq>
      <Hsp_hseq>PAYVNGQLRPYQIQGVNWLVSLHKNKIAGILADEMGLGKTLQTISFLG---YLRYIE--------KIPGPFLVIAPKSTLNNWLREINRWTPD--VNAFILQGDKEERAELIQKKLLGCDFDVVIASYEIIIREKSPLKKINWEYIIIDEAHRIKNEESMLSQVLREFTSRNRLLITGTPLQNNLHELWALLNFLLPDIFSDAQDFD-----------DWFSSESTEEDQDKIVKQLHTVLQPFLLRRIKSDVETSLLPKKELNLYVGMSSMQKKWYKKILEKDLDAV--NGSNGSKES-KTRL------LNIMMQLRKCCNHPYLF-------------DGAEPGPPYTTDEH------LVYNAAKLQVLDKLLKKLKEEGS-------RVLIFSQMSRLLDILEDYCY---FRNYEYCRIDGSTAHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRAHRIGQKKQVKVFRLVTDNSVEEKILERATQKLRLDQLVIQQNRTSLK</Hsp_hseq>
      <Hsp_midline>P  ++ +LR YQ  GVNWL  L+K K+ GIL D+MGLGKTLQ+I  L    YLR  E            P +V+ P +   +W+ E++++ P   +N     G   ER  L Q+ +   + ++V+ASY+++  +    K I W Y I+DE H IKN ++ LS+ +++ T+ +RL+++GTP+QNN+ ELW+L +FL+P        F            D  SS   +E     ++ LH  + PFLLRR+K DV           LY   +  Q K        DLD    +G   S+ S KT+L         +  LRK CNHP L              + A  G      +H      L        +         + G        RVLIF Q+  +LD++E+           Y R+DGS     R   +  +N  D    V LLTT  GGLG+NLT AD VV  + DWNP  DLQAMDRAHRIGQK+ V V+RL+T  ++EEKI+     KL +   VI Q+  SL+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YER164W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:505392:509798:1 gene:YER164W transcript:YER164W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CHD1 description:Chromatin remodeler that regulates various aspects of transcription; acts in in conjunction with Isw1b to regulate chromatin structure and maintain chromatin integrity during transcription elongation by RNAP II by preventing trans-histone exchange over coding regions; contains a chromo domain, a helicase domain and a DNA-binding domain; component of both the SAGA and SLIK complexes [Source:SGD;Acc:S000000966]</Hit_def>
  <Hit_accession>YER164W</Hit_accession>
  <Hit_len>1468</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>218.009</Hsp_bit-score>
      <Hsp_score>554</Hsp_score>
      <Hsp_evalue>1.71205e-57</Hsp_evalue>
      <Hsp_query-from>3481</Hsp_query-from>
      <Hsp_query-to>4995</Hsp_query-to>
      <Hsp_hit-from>369</Hsp_hit-from>
      <Hsp_hit-to>845</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>168</Hsp_identity>
      <Hsp_positive>259</Hsp_positive>
      <Hsp_gaps>70</Hsp_gaps>
      <Hsp_align-len>526</Hsp_align-len>
      <Hsp_qseq>PVPIHAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPSERIRLQRY------------IKNHNLVVASYDVVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDVRL-----YEDFARSQAKHDLDDTISSGKLSSEPSDKTKLKATGH--VFQALQYLRKLCNHPALVLTLQHPEFQRICEELATHGSSLRD-IQHAPKLSALKQXXXXXXXXXXXXXXXVDSGPEAVVAQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSID-VXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVIN</Hsp_qseq>
      <Hsp_hseq>PFIKGGELRDFQLTGINWMAFLWSKGDNGILADEMGLGKTVQTVAFISWLIFARRQ-----------NGPHIIVVPLSTMPAWLDTFEKWAPD--LNCICYMGNQKSRDTIREYEFYTNPRAKGKKTMKFNVLLTTYEYILKDRAELGSIKWQFMAVDEAHRLKNAESSLYESLNSFKVANRMLITGTPLQNNIKELAALVNFLMPGRFTIDQEI------------DFENQDEEQEEYI---HDLHRRIQPFILRRLKKDVEKSLPSKTERILRVELS-DVQTEYYKNILTKNYSALTAGAKGGHFSLLNIMNELKKASNHPYLFDNAEERVLQKFGDGKMTRENVLRGLIMSSGKMVLLDQLLTRLKKDG-----------------HRVLIFSQMVRMLDILGDYL---SIKGINFQRLDGTVPSAQRRISIDHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHVMVYRLVSKDTVEEEVLERARKKMILEYAIIS</Hsp_hseq>
      <Hsp_midline>P     ELR +Q  G+NW++FL     +GIL D+MGLGKT+Q++  ++   + R Q             P ++V P +    W+D   K+ P   LN + Y G    R  ++ Y                N+++ +Y+ +  D     +IKW +  +DE H +KN ++ L +++      +R++++GTP+QNN+ EL +L +FLMPG    + +             D  +   EQE  +     LHR++ PF+LRR+K+DV        E   R +   D+        L+   S  T     GH  +   +  L+K  NHP L    +    Q+  +   T  + LR  I  + K+  L QLL      G                 HRVLIF Q+  MLD++ + L    +  + + RLDG+VP+ QR   +  FN+  S D V LL+T  GGLG+NL  ADTVV  + DWNP  DLQAM RAHRIGQK  V VYRL+++ T+EE+++   + K+ +   +I+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YIL126W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:117992:122071:1 gene:YIL126W transcript:YIL126W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:STH1 description:ATPase component of the RSC chromatin remodeling complex; required for expression of early meiotic genes; promotes base excision repair in chromatin; essential helicase-related protein homologous to Snf2p [Source:SGD;Acc:S000001388]</Hit_def>
  <Hit_accession>YIL126W</Hit_accession>
  <Hit_len>1359</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>217.624</Hsp_bit-score>
      <Hsp_score>553</Hsp_score>
      <Hsp_evalue>1.72158e-57</Hsp_evalue>
      <Hsp_query-from>3502</Hsp_query-from>
      <Hsp_query-to>5034</Hsp_query-to>
      <Hsp_hit-from>470</Hsp_hit-from>
      <Hsp_hit-to>954</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>177</Hsp_identity>
      <Hsp_positive>267</Hsp_positive>
      <Hsp_gaps>82</Hsp_gaps>
      <Hsp_align-len>539</Hsp_align-len>
      <Hsp_qseq>LRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPSERIRLQRYIK--NHNLVVASYDVVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQL-TANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDVRLYEDFARSQAKHDLDDTIS---SGKLS---------------------SEPSDKTKLKATGHVFQALQYLRKLCNHPALVLTLQHPEFQRICEELATHGSSLRDIQHAPKLSALKQXXXXXXXXXXXXXXXVDSGPEAVVAQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNN-DPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDNASLQSMGTEQ</Hsp_qseq>
      <Hsp_hseq>LKEYQLRGLEWMVSLYNNHLNGILADEMGLGKTIQSISLIT---YL----YEVKK--DIG--PFLVIVPLSTITNWTLEFEKWAPS--LNTIIYKGTPNQRHSLQHQIRVGNFDVLLTTYEYIIKDKSLLSKHDWAHMIIDEGHRMKNAQSKLSFTISHYYRTRNRLILTGTPLQNNLPELWALLNFVLPKIFNSAKTFEDWFNTPFANTGTQEKLELTEEETLLIIRRLHKVLRPFLLRRLKKEV-----------EKDLPDKVEKVIKCKLSGLQQQLYQQMLKHNALFVGAGTEGATKGGIKGLNN---KIMQLRKICNHPFVF-----DEVEGVVN--PSRGNSDLLFRVAGKFELLDRVL-----------------PKFKASGHRVLMFFQMTQVMDIME-DFLR--MKDLKYMRLDGSTKTEERTEMLNAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTDSVEEVILERAMQKLDIDGKVIQAGKFDNKSTAEEQ</Hsp_hseq>
      <Hsp_midline>L++YQ  G+ W+  L    L+GIL D+MGLGKT+QSI ++    YL    YE  +  D    P +V+ P +   +W  E  K+ P   LN + Y G P++R  LQ  I+  N ++++ +Y+ +  D        W + I+DEGH +KN ++KLS  +       +RLIL+GTP+QNN+ ELW+L +F++P    +   F   +  P   +         +E  +L +  LH+ + PFLLRR+K++V           + DL D +      KLS                     +E + K  +K   +    +  LRK+CNHP +       E + +     + G+S    + A K   L ++L                 P+   + HRVL+F Q+  ++D++E D LR  +  + Y+RLDGS    +R  ++  FN  D      LL+T  GGLGLNL  ADTV+  + DWNP +DLQA DRAHRIGQK  V + RLIT  ++EE I+     KL I   VI       +S   EQ</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YOR290C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:855147:860258:-1 gene:YOR290C transcript:YOR290C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SNF2 description:Catalytic subunit of the SWI/SNF chromatin remodeling complex; involved in transcriptional regulation; contains DNA-stimulated ATPase activity; functions interdependently in transcriptional activation with Snf5p and Snf6p [Source:SGD;Acc:S000005816]</Hit_def>
  <Hit_accession>YOR290C</Hit_accession>
  <Hit_len>1703</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>218.009</Hsp_bit-score>
      <Hsp_score>554</Hsp_score>
      <Hsp_evalue>2.34192e-57</Hsp_evalue>
      <Hsp_query-from>3490</Hsp_query-from>
      <Hsp_query-to>5034</Hsp_query-to>
      <Hsp_hit-from>763</Hsp_hit-from>
      <Hsp_hit-to>1250</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>171</Hsp_identity>
      <Hsp_positive>266</Hsp_positive>
      <Hsp_gaps>73</Hsp_gaps>
      <Hsp_align-len>538</Hsp_align-len>
      <Hsp_qseq>IHAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPSERIRLQRYIK--NHNLVVASYDVVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVK-QLTANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDVRLYEDFARSQAKHDLDDTISSGKLSS------------------EPSDKTKLKATGHVFQALQYLRKLCNHPALVLTLQHPEFQRICEELATHGSSLRDIQH-APKLSALKQXXXXXXXXXXXXXXXVDSGPEAVVAQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNN-DPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDNASLQSMGTEQ</Hsp_qseq>
      <Hsp_hseq>VGGTLKDYQIKGLQWMVSLFNNHLNGILADEMGLGKTIQTISLLT---YLYEMKNIRG--------PYLVIVPLSTLSNWSSEFAKWAPT--LRTISFKGSPNERKAKQAKIRAGEFDVVLTTFEYIIKERALLSKVKWVHMIIDEGHRMKNAQSKLSLTLNTHYHADYRLILTGTPLQNNLPELWALLNFVLPKIFNSVKSFDEWFNTPFANTGGQDKIELSEEETLLVIRRLHKVLRPFLLRRLKKDV--------EKELPDKVEKVVKCKMSALQQIMYQQMLKYRRLFIGDQNNKKMVGLRGFNNQIMQ-LKKICNHPFV--------FEEVEDQINPTRETNDDIWRVAGKFELLDRIL-----------------PKLKATGHRVLIFFQMTQIMDIME-DFLR--YINIKYLRLDGHTKSDERSELLRLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEVRILRLITTNSVEEVILERAYKKLDIDGKVIQAGKFDNKSTSEEQ</Hsp_hseq>
      <Hsp_midline>+   L+ YQ  G+ W+  L    L+GIL D+MGLGKT+Q+I +L    YL   +  R         P +V+ P +   +W  E  K+ P   L  + + G P+ER   Q  I+    ++V+ +++ +  +      +KW + I+DEGH +KN ++KLS  +     A++RLIL+GTP+QNN+ ELW+L +F++P    +   F   +  P   +         +E  +L +  LH+ + PFLLRR+K+DV         +   D  + +   K+S+                  + ++K  +   G   Q +Q L+K+CNHP +        F+ + +++     +  DI   A K   L ++L                 P+     HRVLIF Q+  ++D++E D LR     + YLRLDG   + +R  ++  FN  D      +L+T  GGLGLNL  ADTV+  + DWNP +DLQA DRAHRIGQK  V + RLIT  ++EE I+     KL I   VI       +S   EQ</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YOR304W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:884514:887876:1 gene:YOR304W transcript:YOR304W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ISW2 description:ATP-dependent DNA translocase involved in chromatin remodeling; ATPase component that, with Itc1p, forms a complex required for repression of a-specific genes, INO1, and early meiotic genes during mitotic growth; the Isw2 complex exhibits basal levels of chromatin binding throughout the genome as well as target-specific chromatin interactions; targeted by Ume6p- and Sua7p-dependent DNA looping to many loci genome-wide [Source:SGD;Acc:S000005831]</Hit_def>
  <Hit_accession>YOR304W</Hit_accession>
  <Hit_len>1120</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>210.305</Hsp_bit-score>
      <Hsp_score>534</Hsp_score>
      <Hsp_evalue>1.64447e-55</Hsp_evalue>
      <Hsp_query-from>3439</Hsp_query-from>
      <Hsp_query-to>5088</Hsp_query-to>
      <Hsp_hit-from>160</Hsp_hit-from>
      <Hsp_hit-to>674</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>177</Hsp_identity>
      <Hsp_positive>271</Hsp_positive>
      <Hsp_gaps>89</Hsp_gaps>
      <Hsp_align-len>577</Hsp_align-len>
      <Hsp_qseq>EQLLDGSKLDNYAIPVPI---HAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPSERIRLQRYI---KNHNLVVASYDVVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDVR-----------------LYEDFARSQAKHDLDDTISSGKLSSEPSDKTKLKATGHVFQALQYLRKLCNHPALVLTLQHPEFQRICEELATHGSSLRDIQHAPKLSALKQXXXXXXXXXXXXXXXVDSGPEAVVAQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSID-VXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDNA-SLQSMGT--EQLLDLFTLEKGGLSEDAPS</Hsp_qseq>
      <Hsp_hseq>EEIVDTYQEDIFVSESPSFVKSGKLRDYQVQGLNWLISLHENKLSGILADEMGLGKTLQTISFLGYLRYVKQIEG-----------PFLIIVPKSTLDNWRREFLKWTPN--VNVLVLHGDKDTRADIVRNIILEARFDVLITSYEMVIREKNALKRLAWQYIVIDEAHRIKNEQSALSQIIRLFYSKNRLLITGTPLQNNLHELWALLNFLLPDIFGDSELFDEWF--------EQNNSEQDQE---IVIQQLHSVLNPFLLRRVKADVEKSLLPKIETNVYVGMTDMQIQWYKSLLEKDIDAV--NGAVG-------KREGKTRLLNIVMQLRKCCNHPYLFEGAEPGPPYTTDEHLIFNSGKM--IILDKLLKRLKEKGS------------------------RVLIFSQMSRLLDILEDYCY---FRDFEYCRIDGSTSHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRAHRIGQKKQVHVYRFVTENAIEEKVIERAAQKLRLDQLVIQQGTGKKTASLGNSKDDLLDMIQFGAKNMFEKKAS</Hsp_hseq>
      <Hsp_midline>E+++D  + D +    P      +LR YQ  G+NWL  L++ KL GIL D+MGLGKTLQ+I  L    Y++  E            P +++ P +   +W  E  K+ P   +N L   G    R  + R I      ++++ SY++V  + +  K + W Y ++DE H IKN ++ LS+ ++   + +RL+++GTP+QNN+ ELW+L +FL+P   G    F   +        +  +S ++QE   + ++ LH  + PFLLRR+K DV                  +   + +S  + D+D    +G +        K +    +   +  LRK CNHP L    +        E L  +   +  I     L  LK+                           RVLIF Q+  +LD++E+           Y R+DGS    +R   +  +N   S   V LLTT  GGLG+NL  ADTV+  + DWNP  DLQAMDRAHRIGQK+ V+VYR +T   +EEK++     KL +   VI Q       S+G   + LLD+       + E   S</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YGL163C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:193707:196403:-1 gene:YGL163C transcript:YGL163C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAD54 description:DNA-dependent ATPase that stimulates strand exchange; modifies the topology of double-stranded DNA; involved in the recombinational repair of double-strand breaks in DNA during vegetative growth and meiosis; member of the SWI/SNF family of DNA translocases; forms nuclear foci upon DNA replication stress [Source:SGD;Acc:S000003131]</Hit_def>
  <Hit_accession>YGL163C</Hit_accession>
  <Hit_len>898</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>180.644</Hsp_bit-score>
      <Hsp_score>457</Hsp_score>
      <Hsp_evalue>1.32703e-46</Hsp_evalue>
      <Hsp_query-from>3568</Hsp_query-from>
      <Hsp_query-to>5076</Hsp_query-to>
      <Hsp_hit-from>332</Hsp_hit-from>
      <Hsp_hit-to>833</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>153</Hsp_identity>
      <Hsp_positive>247</Hsp_positive>
      <Hsp_gaps>53</Hsp_gaps>
      <Hsp_align-len>529</Hsp_align-len>
      <Hsp_qseq>ILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPS----------ERIRLQRYIKNHNLV----VASYDVVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDVR-----LYEDFARSQAKHDLDDTISSGKLSSEPSDKTKLKATGHVFQALQYLRKLCNHPALVLTLQHPEFQRICEELATH---GSSLRDIQ--HAPKLSALKQXXXXXXXXXXXXXXXVDSGPEAVVAQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSID--VXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDNASLQSMGTEQLLDLFTLEKGGLSE</Hsp_qseq>
      <Hsp_hseq>IMADEMGLGKTLQCIALMWT--LLRQGPQGKRLIDKC-----IIVCPSSLVNNWANELIKWLGPNTLTPLAVDGKKSSMGGGNTTVSQAIHAWAQAQGRNIVKPVLIISYETLRRNVDQLKNCNVGLMLADEGHRLKNGDSLTFTALDSISCPRRVILSGTPIQNDLSEYFALLSFSNPGLLGSRAEFRKNFENPILRGRDADATDKEITKGEAQLQKLSTIVSKFIIRRTNDILAKYLPCKYEHVIFVNLKPLQNELYNKLIKSREVKKVVKGVGGSQPLRAIGILKKLCNHPNLLNFEDEFDDEDDLELPDDYNMPGSKARDVQTKYSAKFSILERFLHKIKTE----------------SDDKIVLISNYTQTLDLIEKMCRYKHYSAV---RLDGTMSINKRQKLVDRF-NDPEGQEFIFLLSSKAGGCGINLIGANRLILMDPDWNPAADQQALARVWRDGQKKDCFIYRFISTGTIEEKIFQRQSMKMSLSSCVVDAKEDVERLFSSDNLRQLFQKNENTICE</Hsp_hseq>
      <Hsp_midline>I+ D+MGLGKTLQ I ++     LR     +     C     ++VCP +L  +W +E+ K+     L PL   G  S          + I      +  N+V    + SY+ +R ++D  KN      + DEGH +KNG +    A+  ++   R+ILSGTPIQN++ E ++L  F  PG LG+  +F   +  PIL  RDA ++ +E   G   ++ L   V  F++RR  + +       YE       K   ++  +    S E     K        +A+  L+KLCNHP L+      + +   E    +   GS  RD+Q  ++ K S L++ L                      +  ++++       LD++E         AV   RLDG++   +R  +V RF NDP     + LL++  GG G+NL GA+ ++ ++ DWNP  D QA+ R  R GQK+   +YR I+ GT+EEKI   Q  K+S+++ V++      +   ++ L  LF   +  + E</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YBR073W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:383112:385988:1 gene:YBR073W transcript:YBR073W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RDH54 description:DNA-dependent ATPase; DNA recombination/repair translocase, supercoils DNA and promotes DNA strand opening; stimulates strand exchange by modifying dsDNA topology; involved in recombinational repair of DNA double-strand breaks (DSBs) during mitosis and meiosis; phosphorylated in Mec1p-, Rad53p-dependent way in response to one DSB; contributes to remodelling of nucleosomes; proposed to be involved in crossover interference; interacts with Dmc1p; stimulates Dmc1p and Rad51p [Source:SGD;Acc:S000000277]</Hit_def>
  <Hit_accession>YBR073W</Hit_accession>
  <Hit_len>958</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>180.644</Hsp_bit-score>
      <Hsp_score>457</Hsp_score>
      <Hsp_evalue>1.67186e-46</Hsp_evalue>
      <Hsp_query-from>3568</Hsp_query-from>
      <Hsp_query-to>5055</Hsp_query-to>
      <Hsp_hit-from>343</Hsp_hit-from>
      <Hsp_hit-to>840</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>155</Hsp_identity>
      <Hsp_positive>264</Hsp_positive>
      <Hsp_gaps>66</Hsp_gaps>
      <Hsp_align-len>530</Hsp_align-len>
      <Hsp_qseq>ILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLP-------SMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTG---PPSERIRLQRYIK---NHNLVVASYD---VVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQ--EAGVLAMEALHRQVLPFLLRRM----------KEDVRLYEDFARSQAKHDLDDTISSGKLSSEPSDKTKLKATGHVFQALQYLRKLCNHPALVLTLQHPEFQRICEELATHGSSLRDIQHAPKLSALKQXXXXXXXXXXXXXXXVDSGPEAVVAQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVI------NQDNASLQSMGTEQLLDLFTL</Hsp_qseq>
      <Hsp_hseq>LLADDMGLGKTLMSITLIW--TLIRQTPFASKVSCSQSGIPLTGLCKKILVVCPVTLIGNWKREFGKWLNLSRIGVLTLSSRNSPDMDKMAVRNFLKVQRTYQVLIIGYEKLLSVSEELEKNKHL-IDMLVCDEGHRLKNGASKILNTLKSLDIRRKLLLTGTPIQNDLNEFFTIIDFINPGILGSFASFKRRFIIPITRARDTANRYNEELLEKGEERSKEMIEITKRFILRRTNAILEKYLPPKTDIILFCK-PYSQQILAFKDILQGARL-----DFGQLTFSSSL-GLITLLKKVCNSPGLVGS--DPYYKSHIKDTQSQDSYSRSL-NSGKLKVL-----------MTLLEGIRKG-----TKEKVVVVSNYTQTLDIIENLM---NMAGMSHCRLDGSIPAKQRDSIVTSFNRNPAIFGFLLSAKSGGVGLNLVGASRLILFDNDWNPSVDLQAMSRIHRDGQKKPCFIYRLVTTGCIDEKILQRQLMKNSLSQKFLGDSEMRNKESSNDDLFNKEDLKDLFSV</Hsp_hseq>
      <Hsp_midline>+L DDMGLGKTL SI ++     +R   +    +   + +P        +VVCP TL G+W  E  K+     +  L  +    P  +++ ++ ++K    + +++  Y+    V  +++  K++  +  + DEGH +KNG +K+   +K L    +L+L+GTPIQN++ E +++ DF+ PG LG+   F  R+  PI  +RD  +   E+  E G    + +      F+LRR           K D+ L+     SQ      D +   +L     D  +L  +  +   +  L+K+CN P LV +   P ++   ++  +  S  R + ++ KL  L                G+  G      + +V++       LD++EN +    +  +++ RLDGS+PA QR SIV  FN +P+I   LL+   GG+GLNL GA  ++  ++DWNP  DLQAM R HR GQK+   +YRL+T G ++EKI+  Q  K S++   +      N+++++      E L DLF++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YGL150C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:221104:225573:-1 gene:YGL150C transcript:YGL150C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INO80 description:ATPase and nucleosome spacing factor; subunit of complex containing actin and actin-related proteins that has chromatin remodeling activity and 3&apos; to 5&apos; DNA helicase activity in vitro; promotes nucleosome shifts in the 3 prime direction; has a role in modulating stress gene transcription [Source:SGD;Acc:S000003118]</Hit_def>
  <Hit_accession>YGL150C</Hit_accession>
  <Hit_len>1489</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>158.303</Hsp_bit-score>
      <Hsp_score>399</Hsp_score>
      <Hsp_evalue>3.65993e-39</Hsp_evalue>
      <Hsp_query-from>3481</Hsp_query-from>
      <Hsp_query-to>4398</Hsp_query-to>
      <Hsp_hit-from>699</Hsp_hit-from>
      <Hsp_hit-to>1016</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>101</Hsp_identity>
      <Hsp_positive>168</Hsp_positive>
      <Hsp_gaps>56</Hsp_gaps>
      <Hsp_align-len>340</Hsp_align-len>
      <Hsp_qseq>PVPIHAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILA---GDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPSERIRLQRYIKNHNL----------VVASYDVVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDV---------------------RLYEDFARSQAKHDLDDTISSGKLSSEPSDKTKLKATGHVFQALQYLRKLCNHPAL</Hsp_qseq>
      <Hsp_hseq>PKILACTLKEYQLKGLNWLANLYDQGINGILADEMGLGKTVQSISVLAHLAENHNIWG--------------PFLVVTPASTLHNWVNEISKFLPQ--FKILPYWGNANDRKVLRKFWDRKNLRYNKNAPFHVMVTSYQMVVTDANYLQKMKWQYMILDEAQAIKSSQSSRWKNLLSFHCRNRLLLTGTPIQNSMQELWALLHFIMPSLFDSHDEFNEWFSKDIESHAEANTKLNQQQ-----LRRLHMILKPFMLRRVKKNVQSELGDKIEIDVLCDLTQRQAKLYQ-VLKSQISTNYDAIENAATNDSTSNSASNSGSDQNLINAVMQFRKVCNHPDL</Hsp_hseq>
      <Hsp_midline>P  +   L++YQ  G+NWL+ L    ++GIL D+MGLGKT+QSI +LA    +H +                P +VV P +   +WV+E+ KF P+     L Y G  ++R  L+++    NL          +V SY +V  D ++ + +KW Y ILDE   IK+ ++   K +      +RL+L+GTPIQN++ ELW+L  F+MP    +  +F   + K I +  +A +   +Q+     +  LH  + PF+LRR+K++V                     +LY+   +SQ   + D   ++    S  +  +   +  ++  A+   RK+CNHP L</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>103.219</Hsp_bit-score>
      <Hsp_score>256</Hsp_score>
      <Hsp_evalue>2.41943e-22</Hsp_evalue>
      <Hsp_query-from>4588</Hsp_query-from>
      <Hsp_query-to>5103</Hsp_query-to>
      <Hsp_hit-from>1316</Hsp_hit-from>
      <Hsp_hit-to>1475</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>72</Hsp_identity>
      <Hsp_positive>97</Hsp_positive>
      <Hsp_gaps>12</Hsp_gaps>
      <Hsp_align-len>172</Hsp_align-len>
      <Hsp_qseq>HRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDNASLQSMGTEQLLDLFTLEKGGLSEDAPSSGGAS</Hsp_qseq>
      <Hsp_hseq>HRVLIYFQMTKMMDLMEEYLTYRQY---NHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYRLLVRGTIEERMRDRAKQKEQVQQVVME---------GKTQEKNIKTIEVGENDSEVTREGSKS</Hsp_hseq>
      <Hsp_midline>HRVLI+ Q+  M+D++E  L   Q     ++RLDGS     R  +V  +  +P I V LL+T  GGLG+NLT ADTV+F + DWNP  D QAMDRAHR+GQ R V VYRL+ RGT+EE++    K K  +   V+          G  Q  ++ T+E G    +    G  S</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YDR334W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:1135932:1140476:1 gene:YDR334W transcript:YDR334W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SWR1 description:Swi2/Snf2-related ATPase; structural component of the SWR1 complex, which exchanges histone variant H2AZ (Htz1p) for chromatin-bound histone H2A; relocalizes to the cytosol in response to hypoxia; chronological aging factor that mediates lifespan extension by dietary restriction [Source:SGD;Acc:S000002742]</Hit_def>
  <Hit_accession>YDR334W</Hit_accession>
  <Hit_len>1514</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>156.377</Hsp_bit-score>
      <Hsp_score>394</Hsp_score>
      <Hsp_evalue>1.54275e-38</Hsp_evalue>
      <Hsp_query-from>3478</Hsp_query-from>
      <Hsp_query-to>4398</Hsp_query-to>
      <Hsp_hit-from>686</Hsp_hit-from>
      <Hsp_hit-to>998</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>109</Hsp_identity>
      <Hsp_positive>164</Hsp_positive>
      <Hsp_gaps>68</Hsp_gaps>
      <Hsp_align-len>344</Hsp_align-len>
      <Hsp_qseq>IPVP--IHAELRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPSERIRLQRYIKN---HNLVVASYDVVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMP----------GFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKEDVR---------------------LYEDF-ARSQAKHDLDDTISSGKLSSEPSDKTKLKATGHVFQALQYLRKLCNHPAL</Hsp_qseq>
      <Hsp_hseq>VPVPSLLRGNLRTYQKQGLNWLASLYNNHTNGILADEMGLGKTIQTISLLA---YLACEKENWG--------PHLIVVPTSVLLNWEMEFKRFAPG--FKVLTYYGSPQQRKEKRKGWNKPDAFHVCIVSYQLVVQDQHSFKRKRWQYMVLDEAHNIKNFRSTRWQALLNFNTQRRLLLTGTPLQNNLAELWSLLYFLMPQTVIDGKKVSGFADLD-AFQQWFGRPVDKIIETGQNFGQDKETKKTVAKLHQVLRPYLLRRLKADVEKQMPAKYEHIVYCKLSKRQRFLYDDFMSRAQTKA----TLASGNFMS-------------IVNCLMQLRKVCNHPNL</Hsp_hseq>
      <Hsp_midline>+PVP  +   LR YQ+ G+NWL+ L     +GIL D+MGLGKT+Q+I +LA   YL  ++            P ++V P ++  +W  E  +F P      L Y G P +R   ++        ++ + SY +V  D   FK  +W Y +LDE H IKN ++   +A+       RL+L+GTP+QNN+ ELWSL  FLMP          GF   +  F   +G+P+    +   +  + +     +  LH+ + P+LLRR+K DV                      LY+DF +R+Q K     T++SG   S             +   L  LRK+CNHP L</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>97.4413</Hsp_bit-score>
      <Hsp_score>241</Hsp_score>
      <Hsp_evalue>1.25697e-20</Hsp_evalue>
      <Hsp_query-from>4588</Hsp_query-from>
      <Hsp_query-to>5097</Hsp_query-to>
      <Hsp_hit-from>1263</Hsp_hit-from>
      <Hsp_hit-to>1424</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>69</Hsp_identity>
      <Hsp_positive>94</Hsp_positive>
      <Hsp_gaps>8</Hsp_gaps>
      <Hsp_align-len>170</Hsp_align-len>
      <Hsp_qseq>HRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDNASLQSMGTEQLLDLFTLEKGGLSEDAPSSGG</Hsp_qseq>
      <Hsp_hseq>HRALIFTQMTKVLDVLEQFL---NYHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGADTVIFYDSDWNPAMDKQCQDRCHRIGQTRDVHIYRFVSEHTIESNILKKANQKRQLDNVVIQEGDFTTDYFSKLSVRDLLGSE---LPENA--SGG</Hsp_hseq>
      <Hsp_midline>HR LIF Q+  +LD++E  L         Y+RLDG+     R  +  RFN D  I V +L++  GGLG+NLTGADTV+F + DWNP  D Q  DR HRIGQ R V++YR ++  T+E  I+     K  + N VI + + +        + DL   E   L E+A  SGG</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YAL019W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:I:114919:118314:1 gene:YAL019W transcript:YAL019W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FUN30 description:Snf2p family member with ATP-dependent chromatin remodeling activity; has a role in silencing at the mating type locus, telomeres and centromeres; enriched at centromeres and is required for correct chromatin structure around centromeres, as well as at the boundary element of the silent HMR; recruited to DNA double-strand breaks (DSBs) where it promotes 5&apos; strand resection of DSBs; potential Cdc28p substrate [Source:SGD;Acc:S000000017]</Hit_def>
  <Hit_accession>YAL019W</Hit_accession>
  <Hit_len>1131</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>148.673</Hsp_bit-score>
      <Hsp_score>374</Hsp_score>
      <Hsp_evalue>2.36432e-36</Hsp_evalue>
      <Hsp_query-from>3502</Hsp_query-from>
      <Hsp_query-to>4230</Hsp_query-to>
      <Hsp_hit-from>572</Hsp_hit-from>
      <Hsp_hit-to>806</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>89</Hsp_identity>
      <Hsp_positive>137</Hsp_positive>
      <Hsp_gaps>26</Hsp_gaps>
      <Hsp_align-len>252</Hsp_align-len>
      <Hsp_qseq>LRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPSERIR--LQRYIKNHNLVVASYDVV---RNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMPG-FLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHR---QVLPFLLRRMKEDV</Hsp_qseq>
      <Hsp_hseq>LKDYQQTGINWLNLLYQNKMSCILADDMGLGKTCQVISFFA---YLK-------QINEPG--PHLVVVPSSTLENWLREFQKFAPALKIEPYYGSLQEREELRDILERNAGKYDVIVTTYNLAAGNKYDVSFLKNRNFNVVVYDEGHMLKNSTSERFAKLMKIRANFRLLLTGTPLQNNLKELMSLLEFIMPNLFISKKESFDA-----IFKQRAKTTDDNKNHNPLLAQEAITRAKTMMKPFILRRRKDQV</Hsp_hseq>
      <Hsp_midline>L+ YQQ G+NWL+ L + K+  IL DDMGLGKT Q I   A   YL+       Q  +    P +VV P +   +W+ E  KF P   + P + +    E +R  L+R    ++++V +Y++    + D+ F KN  +N  + DEGHM+KN  ++    + ++ AN RL+L+GTP+QNN+ EL SL +F+MP  F+  +  F A     I   R   +   +    +LA EA+ R    + PF+LRR K+ V</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>81.6481</Hsp_bit-score>
      <Hsp_score>200</Hsp_score>
      <Hsp_evalue>9.13959e-16</Hsp_evalue>
      <Hsp_query-from>4576</Hsp_query-from>
      <Hsp_query-to>5049</Hsp_query-to>
      <Hsp_hit-from>963</Hsp_hit-from>
      <Hsp_hit-to>1119</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>61</Hsp_identity>
      <Hsp_positive>93</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>161</Hsp_align-len>
      <Hsp_qseq>VVAQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDNAS---LQSMGTEQLLDLF</Hsp_qseq>
      <Hsp_hseq>VDKQEKVLIFSLFTQVLDILEMVL---STLDYKFLRLDGSTQVNDRQLLIDKFYEDKDIPIFILSTKAGGFGINLVCANNVIIFDQSFNPHDDRQAADRAHRVGQTKEVNITTLITKDSIEEKIHQLAKNKLAL-DSYISEDKKSQDVLESKVSDMLEDII</Hsp_hseq>
      <Hsp_midline>V  Q +VLIF     +LD++E  L         +LRLDGS     R  ++ +F  D  I + +L+T  GG G+NL  A+ V+  +  +NP  D QA DRAHR+GQ + VN+  LIT+ ++EEKI  L K KL++ ++ I++D  S   L+S  ++ L D+ </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YFR038W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:229380:231941:1 gene:YFR038W transcript:YFR038W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:IRC5 description:Putative ATPase containing the DEAD/H helicase-related sequence motif; null mutant displays increased levels of spontaneous Rad52p foci; SWAT-GFP and mCherry fusion proteins localize to the nucleus [Source:SGD;Acc:S000001934]</Hit_def>
  <Hit_accession>YFR038W</Hit_accession>
  <Hit_len>853</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>145.976</Hsp_bit-score>
      <Hsp_score>367</Hsp_score>
      <Hsp_evalue>9.92515e-36</Hsp_evalue>
      <Hsp_query-from>3502</Hsp_query-from>
      <Hsp_query-to>4230</Hsp_query-to>
      <Hsp_hit-from>222</Hsp_hit-from>
      <Hsp_hit-to>461</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>87</Hsp_identity>
      <Hsp_positive>136</Hsp_positive>
      <Hsp_gaps>31</Hsp_gaps>
      <Hsp_align-len>257</Hsp_align-len>
      <Hsp_qseq>LRKYQQDGVNWLSFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPSERIR---LQRYIKNHN---LVVASYDVVRNDIDFFKNIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVL--------PFLLRRMKEDV</Hsp_qseq>
      <Hsp_hseq>LKPYQLEGLNWLITLYENGLNGILADEMGLGKTVQSIALLAFIYEMDTKG------------PFLVTAPLSTLDNWMNEFAKFAPD--LPVLKYYGTNGYKERSAKLKNFFKQHGGTGIVITSYEIILRDTDLIMSQNWKFLIVDEGHRLKNINCRLIKELKKINTSNRLLLTGTPLQNNLAELWSLLNFIMPDIFADFEIFNKWFD---FDSLNLGSGSNSEALNKLINDELQKNLISNLHTILKPFLLRRLKKVV</Hsp_hseq>
      <Hsp_midline>L+ YQ +G+NWL  L +  L+GIL D+MGLGKT+QSI +LA  + +  +             P +V  P +   +W++E  KF P   L  L Y G    + R   L+ + K H    +V+ SY+++  D D   +  W + I+DEGH +KN   +L K +K++  ++RL+L+GTP+QNN+ ELWSL +F+MP        F   +      S +  S S  +    L  + L + ++        PFLLRR+K+ V</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>83.1889</Hsp_bit-score>
      <Hsp_score>204</Hsp_score>
      <Hsp_evalue>2.39882e-16</Hsp_evalue>
      <Hsp_query-from>4567</Hsp_query-from>
      <Hsp_query-to>4992</Hsp_query-to>
      <Hsp_hit-from>613</Hsp_hit-from>
      <Hsp_hit-to>752</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>60</Hsp_identity>
      <Hsp_positive>82</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>143</Hsp_align-len>
      <Hsp_qseq>PEAVVAQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSI-DVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVI</Hsp_qseq>
      <Hsp_hseq>PPLISEGHKVLIYSQFVNMLDLIED---WCDLNSFATFRIDGSVNNETRKDQLEKFNSSKDKHNIFLLSTRAAGLGINLVGADTVVLFDSDWNPQVDLQAMDRCHRIGQESPVIVYRLCCDNTIEHVILTRAANKRNLERMVI</Hsp_hseq>
      <Hsp_midline>P  +   H+VLI+ Q  +MLD++E+      L +    R+DGSV    R   + +FN+     ++ LL+T   GLG+NL GADTVV  + DWNP  DLQAMDR HRIGQ+  V VYRL    T+E  I+     K ++   VI</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YOR191W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:692475:697334:1 gene:YOR191W transcript:YOR191W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ULS1 description:Swi2/Snf2-related translocase, SUMO-Targeted Ubiquitin Ligase (STUbL); required for maintenance of NHEJ inhibition at telomeres; functions at telomeres to translocate and ubiquitinylate poly-sumoylated Rap1p for proteosomal degradation; plays role in antagonizing silencing during mating-type switching; only known STUbL with a translocase activity; contains RING finger domain; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000005717]</Hit_def>
  <Hit_accession>YOR191W</Hit_accession>
  <Hit_len>1619</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>93.2041</Hsp_bit-score>
      <Hsp_score>230</Hsp_score>
      <Hsp_evalue>2.61987e-19</Hsp_evalue>
      <Hsp_query-from>3439</Hsp_query-from>
      <Hsp_query-to>4227</Hsp_query-to>
      <Hsp_hit-from>926</Hsp_hit-from>
      <Hsp_hit-to>1208</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>80</Hsp_identity>
      <Hsp_positive>133</Hsp_positive>
      <Hsp_gaps>56</Hsp_gaps>
      <Hsp_align-len>301</Hsp_align-len>
      <Hsp_qseq>EQLLDGSKLDNYAIPVPIHAELRKYQQDGVNWL-SFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVH-KFCPREFLNPLHYTGPPSERIRLQRYIKNHNLVVASYDVVRNDID-----------------------------------FFKNIKWNYCI-LDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFLMPGFLGTEHQFAARYGKPILASRDARSSSREQEAGVLAMEALHRQVLPFLLRRMKED</Hsp_qseq>
      <Hsp_hseq>ESIIDGEAL----TPEDMTVNLLKHQRLGLHWLLQVENSAKKGGLLADDMGLGKTIQAIALMLAN---------RSEESKCKT--NLIVAPVSVLRVWKGELETKVKKRAKFTTFIFGGSGNGKVKHWRDLARYDAVLVSYQTLANEFKKHWPKKLDGEQNQLPAVPHIQALNRLKTSNEYYSPFFCNDSTFYRILLDEGQNIKNKNTRASKACCTINGMYRWVLSGTPIQNSMDELYSLIRFLRIPPYHKEQRFKLDIGRFFQRNKQYQYDNEDRKNALRKVRVLLNAI---MLRRSKAD</Hsp_hseq>
      <Hsp_midline>E ++DG  L     P  +   L K+Q+ G++WL    N  K  G+L DDMGLGKT+Q+I ++  +         R++ + C T  +++V P ++   W  E+  K   R       + G  + +++  R +  ++ V+ SY  + N+                                     FF N    Y I LDEG  IKN  T+ SKA   +   +R +LSGTPIQN++ EL+SL  FL       E +F    G+    ++  +  + +++  +  +  L   +   +LRR K D</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>70.8626</Hsp_bit-score>
      <Hsp_score>172</Hsp_score>
      <Hsp_evalue>1.75661e-12</Hsp_evalue>
      <Hsp_query-from>4582</Hsp_query-from>
      <Hsp_query-to>5055</Hsp_query-to>
      <Hsp_hit-from>1460</Hsp_hit-from>
      <Hsp_hit-to>1616</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>52</Hsp_identity>
      <Hsp_positive>90</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>159</Hsp_align-len>
      <Hsp_qseq>AQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDN-ASLQSMGTEQLLDLFTL</Hsp_qseq>
      <Hsp_hseq>ATEKIIIFSQFTTFFEILEH-FLKNKL-NFPYLKYIGSMNAQRRSDVINEFYRDPEKRILLISMKAGNSGLTLTCANHVVIVDPFWNPYVEEQAQDRCYRISQTKKVQVHKLFIKDSVEDRISELQKRKKEMVDSAMDPGKIKEVNSLGRRELGFLFGL</Hsp_hseq>
      <Hsp_midline>A  +++IF Q  +  +++E+  L+ +L    YL+  GS+ A +R  ++  F  DP   +LL++   G  GL LT A+ VV V+  WNP  + QA DR +RI Q + V V++L  + ++E++I  LQK K  + ++ ++      + S+G  +L  LF L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YBR114W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:467248:469620:1 gene:YBR114W transcript:YBR114W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAD16 description:Nucleotide excision repair (NER) protein; binds damaged DNA during NER; binds DNA in an ATP-dependent manner (with Rad7p) during NER; required for NER of non-transcribed chromatin; subunit of Nucleotide Excision Repair Factor 4 (NEF4) and the Elongin-Cullin-Socs (ECS) ligase complex [Source:SGD;Acc:S000000318]</Hit_def>
  <Hit_accession>YBR114W</Hit_accession>
  <Hit_len>790</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>78.1814</Hsp_bit-score>
      <Hsp_score>191</Hsp_score>
      <Hsp_evalue>7.68858e-15</Hsp_evalue>
      <Hsp_query-from>3481</Hsp_query-from>
      <Hsp_query-to>4056</Hsp_query-to>
      <Hsp_hit-from>177</Hsp_hit-from>
      <Hsp_hit-to>368</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>61</Hsp_identity>
      <Hsp_positive>98</Hsp_positive>
      <Hsp_gaps>38</Hsp_gaps>
      <Hsp_align-len>211</Hsp_align-len>
      <Hsp_qseq>PVPIHAELRKYQQDGVNWL-SFLNKYKLHGILCDDMGLGKTLQSICILAGDHYLRAQEYERTQAADCATLPSMVVCPPTLTGHWVDEVHKFCPREFLNPLHYTGPPSERIR-LQRYIKNHNLVVASYDVV-----------RNDIDFFK------NIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFL</Hsp_qseq>
      <Hsp_hseq>PDGMTIKLLPFQLEGLHWLISQEESIYAGGVLADEMGMGKTIQTIALLMND---------------LTKSPSLVVAPTVALMQWKNEIEQHTKGQLKIYIYHGASRTTDIKDLQGY----DVVLTTYAVLESVFRKQNYGFRRKNGLFKQPSVLHNIDFYRVILDEAHNIKDRQSNTARAVNNLKTQKRWCLSGTPLQNRIGEMYSLIRFL</Hsp_hseq>
      <Hsp_midline>P  +  +L  +Q +G++WL S        G+L D+MG+GKT+Q+I +L  D                   PS+VV P      W +E+ +    +    +++    +  I+ LQ Y    ++V+ +Y V+           R     FK      NI +   ILDE H IK+ ++  ++AV  L    R  LSGTP+QN + E++SL  FL</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>77.411</Hsp_bit-score>
      <Hsp_score>189</Hsp_score>
      <Hsp_evalue>1.21753e-14</Hsp_evalue>
      <Hsp_query-from>4591</Hsp_query-from>
      <Hsp_query-to>5052</Hsp_query-to>
      <Hsp_hit-from>639</Hsp_hit-from>
      <Hsp_hit-to>789</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>54</Hsp_identity>
      <Hsp_positive>82</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>154</Hsp_align-len>
      <Hsp_qseq>RVLIFCQLKSMLDMVENDLLRPQLPAVTYLRLDGSVPAGQRHSIVARFNNDPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIANTVINQDNASLQSMGTEQLLDLFT</Hsp_qseq>
      <Hsp_hseq>KSIVFSQFTSMLDLVEWRLKRAGFQTV---KLQGSMSPTQRDETIKYFMNNIQCEVFLVSLKAGGVALNLCEASQVFILDPWWNPSVEWQSGDRVHRIGQYRPVKITRFCIEDSIEARIIELQEKKANMIHATINQDEAAISRLTPADLQFLFN</Hsp_hseq>
      <Hsp_midline>+ ++F Q  SMLD+VE  L R     V   +L GS+   QR   +  F N+   +V L++   GG+ LNL  A  V  ++  WNP  + Q+ DR HRIGQ R V + R     ++E +I+ LQ+ K ++ +  INQD A++  +    L  LF </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YLR032W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:204991:208500:1 gene:YLR032W transcript:YLR032W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAD5 description:DNA helicase/Ubiquitin ligase; involved in error-free DNA damage tolerance (DDT), replication fork regression during postreplication repair by template switching, error-prone translesion synthesis; promotes synthesis of free and PCNA-bound polyubiquitin chains by Ubc13p-Mms2p; forms nuclear foci upon DNA replication stress; associates with native telomeres, cooperates with homologous recombination in senescent cells; human homolog HLTF can complement yeast null mutant [Source:SGD;Acc:S000004022]</Hit_def>
  <Hit_accession>YLR032W</Hit_accession>
  <Hit_len>1169</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>59.6918</Hsp_bit-score>
      <Hsp_score>143</Hsp_score>
      <Hsp_evalue>4.71147e-09</Hsp_evalue>
      <Hsp_query-from>3565</Hsp_query-from>
      <Hsp_query-to>4056</Hsp_query-to>
      <Hsp_hit-from>528</Hsp_hit-from>
      <Hsp_hit-to>727</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>57</Hsp_identity>
      <Hsp_positive>90</Hsp_positive>
      <Hsp_gaps>36</Hsp_gaps>
      <Hsp_align-len>200</Hsp_align-len>
      <Hsp_qseq>GILCDDMGLGKTLQSIC-ILAGDH---YLRAQEYERTQAADCATLPS--------------MVVCPPTLTGHWVDEVHKFCPR-EFLNPLHYTGPPSERIRLQRYIKNHNLVV-ASYDVVRN-------------DIDFFK---NIKWNYCILDEGHMIKNGKTKLSKAVKQLTANHRLILSGTPIQNNVLELWSLFDFL</Hsp_qseq>
      <Hsp_hseq>GILSDEMGLGKTVAAYSLVLSCPHDSDVVDKKLFDIENTAVSDNLPSTWQDNKKPYASKTTLIVVPMSLLTQWSNEFTKANNSPDMYHEVYYGGNVSSLKTLLTKTKTPPTVVLTTYGIVQNEWTKHSKGRMTDEDVNISSGLFSVNFYRIIIDEGHNIRNRTTVTSKAVMALQGKCKWVLTGTPIINRLDDLYSLVKFL</Hsp_hseq>
      <Hsp_midline>GIL D+MGLGKT+ +   +L+  H    +  + ++    A    LPS              ++V P +L   W +E  K     +  + ++Y G  S    L    K    VV  +Y +V+N             D++      ++ +   I+DEGH I+N  T  SKAV  L    + +L+GTPI N + +L+SL  FL</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>56.225</Hsp_bit-score>
      <Hsp_score>134</Hsp_score>
      <Hsp_evalue>4.34322e-08</Hsp_evalue>
      <Hsp_query-from>4582</Hsp_query-from>
      <Hsp_query-to>4980</Hsp_query-to>
      <Hsp_hit-from>1011</Hsp_hit-from>
      <Hsp_hit-to>1146</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>48</Hsp_identity>
      <Hsp_positive>77</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>136</Hsp_align-len>
      <Hsp_qseq>AQHRVLIFCQLKSMLDMVENDLLRPQLPAVTYL-RLDGSVPAGQRHSIVARF--NNDPSIDVXXXXXXXXXXXXXXXXADTVVFVEHDWNPMRDLQAMDRAHRIGQKRVVNVYRLITRGTLEEKIMGLQKFKLSIA</Hsp_qseq>
      <Hsp_hseq>AGEQVVIFSQFSTYLDILEKELTHTFSKDVAKIYKFDGRLSLKERTSVLADFAVKDYSRQKILLLSLKAGGVGLNLTCASHAYMMDPWWSPSMEDQAIDRLHRIGQTNSVKVMRFIIQDSIEEKMLRIQEKKRTIG</Hsp_hseq>
      <Hsp_midline>A  +V+IF Q  + LD++E +L       V  + + DG +   +R S++A F   +     +LLL+   GG+GLNLT A     ++  W+P  + QA+DR HRIGQ   V V R I + ++EEK++ +Q+ K +I </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>103</Statistics_hsp-len>
      <Statistics_eff-space>3650792278</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>13</Iteration_iter-num>
  <Iteration_query-ID>Query_13</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052429-RA transcript Note:&quot;Similar to prom1a Prominin-1-A (Danio rerio)&quot; offset:220 AED:0.18 eAED:0.18 QI:220|0.76|1|1|0.64|0.61|18|1687|698</Iteration_query-def>
  <Iteration_query-len>4004</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>101</Statistics_hsp-len>
      <Statistics_eff-space>2771126811</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>14</Iteration_iter-num>
  <Iteration_query-ID>Query_14</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052430-RA transcript Note:&quot;Similar to armh3 Armadillo-like helical domain-containing protein 3 (Xenopus laevis)&quot; offset:342 AED:0.46 eAED:0.46 QI:342|0.55|0.5|0.6|0.66|0.8|10|0|251</Iteration_query-def>
  <Iteration_query-len>1098</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>636203425</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>15</Iteration_iter-num>
  <Iteration_query-ID>Query_15</Iteration_query-ID>
  <Iteration_query-def>PMZ_0041557-RA transcript Note:&quot;Similar to DOCK1 Dedicator of cytokinesis protein 1 (Homo sapiens)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0.5|0.4|5|0|116</Iteration_query-def>
  <Iteration_query-len>351</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>77</Statistics_hsp-len>
      <Statistics_eff-space>96234680</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>16</Iteration_iter-num>
  <Iteration_query-ID>Query_16</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052417-RA transcript Note:&quot;Similar to DOCK1 Dedicator of cytokinesis protein 1 (Homo sapiens)&quot; offset:0 AED:0.93 eAED:0.93 QI:0|0|0|0.16|1|1|6|0|263</Iteration_query-def>
  <Iteration_query-len>792</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>88</Statistics_hsp-len>
      <Statistics_eff-space>410654992</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>17</Iteration_iter-num>
  <Iteration_query-ID>Query_17</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052418-RA transcript Note:&quot;Similar to Dock1 Dedicator of cytokinesis protein 1 (Mus musculus)&quot; offset:0 AED:0.48 eAED:0.51 QI:0|0|0|0.8|0.88|0.8|10|0|310</Iteration_query-def>
  <Iteration_query-len>933</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>89</Statistics_hsp-len>
      <Statistics_eff-space>516520074</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>18</Iteration_iter-num>
  <Iteration_query-ID>Query_18</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052420-RA transcript Note:&quot;Similar to ALMS1 Alstrom syndrome protein 1 (Homo sapiens)&quot; offset:0 AED:0.28 eAED:0.28 QI:0|0.31|0.29|0.41|0.81|0.76|17|2070|1489</Iteration_query-def>
  <Iteration_query-len>6540</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>105</Statistics_hsp-len>
      <Statistics_eff-space>4608714025</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>19</Iteration_iter-num>
  <Iteration_query-ID>Query_19</Iteration_query-ID>
  <Iteration_query-def>PMZ_0052421-RA transcript Note:&quot;Similar to FOXI1 Forkhead box protein I1 (Homo sapiens)&quot; offset:0 AED:0.07 eAED:0.07 QI:0|0|0.33|0.66|0|0.33|3|2936|324</Iteration_query-def>
  <Iteration_query-len>3911</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YCR065W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:III:229310:231004:1 gene:YCR065W transcript:YCR065W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HCM1 description:Forkhead transcription factor; drives S-phase activation of genes involved in chromosome segregation, spindle dynamics, budding; also activates genes involved in respiration, use of alternative energy sources (like proline), NAD synthesis, oxidative stress resistance; key factor in early adaptation to nutrient deficiency and diauxic shift; suppressor of calmodulin mutants with specific SPB assembly defects; ortholog of C. elegans lifespan regulator PHA-4 [Source:SGD;Acc:S000000661]</Hit_def>
  <Hit_accession>YCR065W</Hit_accession>
  <Hit_len>564</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>92.0485</Hsp_bit-score>
      <Hsp_score>227</Hsp_score>
      <Hsp_evalue>1.64416e-19</Hsp_evalue>
      <Hsp_query-from>40</Hsp_query-from>
      <Hsp_query-to>318</Hsp_query-to>
      <Hsp_hit-from>109</Hsp_hit-from>
      <Hsp_hit-to>197</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>44</Hsp_identity>
      <Hsp_positive>61</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>93</Hsp_align-len>
      <Hsp_qseq>RPPYSYSALIAMSIQGAPDHKLTLNQIYQYVTDNFPYYERSKAGWQNSIRHNLSLNDCFRKTDLTYKPVAPRKGNYWTLDPNCEKMFDNGTFR</Hsp_qseq>
      <Hsp_hseq>KPPYSYATLICLAILQSQEGKLTLSQIYHWIHVHFPYYKQKDASWQNSIRHNLSLNDAFIKTEKS----CDGKGHFWEVRPGAETKFFKGENR</Hsp_hseq>
      <Hsp_midline>+PPYSY+ LI ++I  + + KLTL+QIY ++  +FPYY++  A WQNSIRHNLSLND F KT+ +       KG++W + P  E  F  G  R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YNL068C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:495701:498289:-1 gene:YNL068C transcript:YNL068C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FKH2 description:Forkhead family transcription factor; rate-limiting activator of replication origins; evolutionarily conserved regulator of lifespan; binds multiple chromosomal elements with distinct specificities, cell cycle dynamics; positively regulates transcriptional elongation; facilitates clustering, activation of early-firing replication origins; negative role in chromatin silencing at HML and HMR; major role in expression of G2/M phase genes; relocalizes to cytosol under hypoxia [Source:SGD;Acc:S000005012]</Hit_def>
  <Hit_accession>YNL068C</Hit_accession>
  <Hit_len>862</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>85.1149</Hsp_bit-score>
      <Hsp_score>209</Hsp_score>
      <Hsp_evalue>4.04262e-17</Hsp_evalue>
      <Hsp_query-from>31</Hsp_query-from>
      <Hsp_query-to>402</Hsp_query-to>
      <Hsp_hit-from>337</Hsp_hit-from>
      <Hsp_hit-to>461</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>45</Hsp_identity>
      <Hsp_positive>74</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>127</Hsp_align-len>
      <Hsp_qseq>RMARPPYSYSALIAMSIQGAPDHKLTLNQIYQYVTDNFPYYERSKAGWQNSIRHNLSLNDCFRKTDLTYKPVAPRKGNYWTLDPNCEKMFDN--GTFRRKRKRKGADSGAPAR-HSAVPSAMPSACD</Hsp_qseq>
      <Hsp_hseq>RNVKPPHSYATMITQAILSSPEGVISLADIYKYISSNYAYYRFAKSGWQNSIRHNLSLNKAFEK--VPRRPNEPGKGMKWRISESYQQEFLNKWNTGKVGKIRRGSSVARQLQLHMAKFNSLPMEMD</Hsp_hseq>
      <Hsp_midline>R  +PP+SY+ +I  +I  +P+  ++L  IY+Y++ N+ YY  +K+GWQNSIRHNLSLN  F K  +  +P  P KG  W +  + ++ F N   T +  + R+G+      + H A  +++P   D</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YIL131C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:100781:102235:-1 gene:YIL131C transcript:YIL131C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FKH1 description:Forkhead family transcription factor; rate-limiting replication origin activator; evolutionarily conserved lifespan regulator; binds multiple chromosomal elements with distinct specificities, cell cycle dynamics; regulates transcription elongation, chromatin silencing at mating loci, expression of G2/M phase genes; facilitates clustering, activation of early-firing replication origins; binds HML recombination enhancer, regulates donor preference during mating-type switching [Source:SGD;Acc:S000001393]</Hit_def>
  <Hit_accession>YIL131C</Hit_accession>
  <Hit_len>484</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>73.559</Hsp_bit-score>
      <Hsp_score>179</Hsp_score>
      <Hsp_evalue>8.17282e-14</Hsp_evalue>
      <Hsp_query-from>31</Hsp_query-from>
      <Hsp_query-to>342</Hsp_query-to>
      <Hsp_hit-from>300</Hsp_hit-from>
      <Hsp_hit-to>403</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>36</Hsp_identity>
      <Hsp_positive>59</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>106</Hsp_align-len>
      <Hsp_qseq>RMARPPYSYSALIAMSIQGAPDHKLTLNQIYQYVTDNFPYYERSKAGWQNSIRHNLSLNDCFRKTDLTYKPVAPRKGNYWTLDPNCEKMFDN--GTFRRKRKRKGA</Hsp_qseq>
      <Hsp_hseq>RYIKPPQSYASMITQAILSTPEGSISLADIYKFISDNYAFYRFSQMAWQNSVRHNLSLNKAFEK--VPKRAGQQGKGMNWKISDEVRRDFLNKWNAGKLSKIRRGA</Hsp_hseq>
      <Hsp_midline>R  +PP SY+++I  +I   P+  ++L  IY++++DN+ +Y  S+  WQNS+RHNLSLN  F K  +  +     KG  W +     + F N     +  + R+GA</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YPR104C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:733623:736433:-1 gene:YPR104C transcript:YPR104C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FHL1 description:Regulator of ribosomal protein (RP) transcription; has forkhead associated domain that binds phosphorylated proteins; recruits coactivator Ifh1p or corepressor Crf1p to RP gene promoters; also has forkhead DNA-binding domain though in vitro DNA binding assays give inconsistent results; computational analyses suggest it binds DNA directly at highly active RP genes and indirectly through Rap1p motifs at others; suppresses RNA pol III and splicing factor prp4 mutants [Source:SGD;Acc:S000006308]</Hit_def>
  <Hit_accession>YPR104C</Hit_accession>
  <Hit_len>936</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>59.3066</Hsp_bit-score>
      <Hsp_score>142</Hsp_score>
      <Hsp_evalue>4.04052e-09</Hsp_evalue>
      <Hsp_query-from>40</Hsp_query-from>
      <Hsp_query-to>372</Hsp_query-to>
      <Hsp_hit-from>461</Hsp_hit-from>
      <Hsp_hit-to>559</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>39</Hsp_identity>
      <Hsp_positive>57</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>112</Hsp_align-len>
      <Hsp_qseq>RPPYSYSALIAMSIQGAPDHK-LTLNQIYQYVTDNFPYYERSKAGWQNSIRHNLSLNDCFRKTDLTYKPVAPRKGNYWTLDPNCEKMFDNGTFRRKRKRKGADSGAPARHSA</Hsp_qseq>
      <Hsp_hseq>KPTVSYSAMLTTCIRKYSTAKGMSLSEIYAGIRELFPYYKYCPDGWQSSVRHNLSLNKSFRKVS------KEGKGWLWGLD-------EEYIAERERQKKKQSEIAVAKAQA</Hsp_hseq>
      <Hsp_midline>+P  SYSA++   I+     K ++L++IY  + + FPYY+    GWQ+S+RHNLSLN  FRK           KG  W LD       +     R+R++K     A A+  A</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>101</Statistics_hsp-len>
      <Statistics_eff-space>2701455334</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>20</Iteration_iter-num>
  <Iteration_query-ID>Query_20</Iteration_query-ID>
  <Iteration_query-def>PMZ_0041555-RA transcript Note:&quot;Similar to QDPR Dihydropteridine reductase (Homo sapiens)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0.25|0.2|5|999|368</Iteration_query-def>
  <Iteration_query-len>2106</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>97</Statistics_hsp-len>
      <Statistics_eff-space>1375689535</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>

