<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
  <BlastOutput_program>blastx</BlastOutput_program>
  <BlastOutput_version>BLASTX 2.10.0+</BlastOutput_version>
  <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
  <BlastOutput_db>/home/smr/dbs/ensembl/release-100/Saccharomyces_cerevisiae.R64-1-1.pep.all.fa</BlastOutput_db>
  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
  <BlastOutput_query-def>PMZ_0059988-RA transcript Note:&quot;Similar to Arid1b AT-rich interactive domain-containing protein 1B (Mus musculus)&quot; offset:0 AED:0.11 eAED:0.12 QI:0|0.12|0.22|0.55|1|1|9|1124|1351</BlastOutput_query-def>
  <BlastOutput_query-len>5180</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_matrix>BLOSUM62</Parameters_matrix>
      <Parameters_expect>1e-05</Parameters_expect>
      <Parameters_gap-open>11</Parameters_gap-open>
      <Parameters_gap-extend>1</Parameters_gap-extend>
      <Parameters_filter>L;</Parameters_filter>
    </Parameters>
  </BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
  <Iteration_iter-num>1</Iteration_iter-num>
  <Iteration_query-ID>Query_1</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059988-RA transcript Note:&quot;Similar to Arid1b AT-rich interactive domain-containing protein 1B (Mus musculus)&quot; offset:0 AED:0.11 eAED:0.12 QI:0|0.12|0.22|0.55|1|1|9|1124|1351</Iteration_query-def>
  <Iteration_query-len>5180</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>103</Statistics_hsp-len>
      <Statistics_eff-space>3626215341</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>2</Iteration_iter-num>
  <Iteration_query-ID>Query_2</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059976-RA transcript Note:&quot;Similar to TPBG Trophoblast glycoprotein (Homo sapiens)&quot; offset:0 AED:0.23 eAED:0.31 QI:0|-1|0|1|-1|1|1|0|372</Iteration_query-def>
  <Iteration_query-len>1119</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>652397694</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>3</Iteration_iter-num>
  <Iteration_query-ID>Query_3</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059977-RA transcript Note:&quot;Similar to tmem39a-b Transmembrane protein 39A-B (Xenopus laevis)&quot; offset:1 AED:0.16 eAED:0.16 QI:1|0|0|1|1|1|4|0|217</Iteration_query-def>
  <Iteration_query-len>655</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>86</Statistics_hsp-len>
      <Statistics_eff-space>309733644</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>4</Iteration_iter-num>
  <Iteration_query-ID>Query_4</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059978-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.90 eAED:0.96 QI:0|0.12|0.11|0.44|1|1|9|0|11880</Iteration_query-def>
  <Iteration_query-len>35643</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>117</Statistics_hsp-len>
      <Statistics_eff-space>25196923388</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>5</Iteration_iter-num>
  <Iteration_query-ID>Query_5</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059979-RA transcript Note:&quot;Similar to INPP5B Type II inositol 1,4,5-trisphosphate 5-phosphatase (Homo sapiens)&quot; offset:0 AED:0.39 eAED:0.50 QI:0|0|0|0.71|1|1|14|0|485</Iteration_query-def>
  <Iteration_query-len>1458</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YIL002C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:350591:353431:-1 gene:YIL002C transcript:YIL002C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INP51 description:Phosphatidylinositol 4,5-bisphosphate 5-phosphatase; synaptojanin-like protein with an N-terminal Sac1 domain, plays a role in phosphatidylinositol 4,5-bisphosphate homeostasis and in endocytosis; null mutation confers cold-tolerant growth [Source:SGD;Acc:S000001264]</Hit_def>
  <Hit_accession>YIL002C</Hit_accession>
  <Hit_len>946</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>81.2629</Hsp_bit-score>
      <Hsp_score>199</Hsp_score>
      <Hsp_evalue>9.48918e-17</Hsp_evalue>
      <Hsp_query-from>280</Hsp_query-from>
      <Hsp_query-to>591</Hsp_query-to>
      <Hsp_hit-from>666</Hsp_hit-from>
      <Hsp_hit-to>778</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>65</Hsp_positive>
      <Hsp_gaps>23</Hsp_gaps>
      <Hsp_align-len>120</Hsp_align-len>
      <Hsp_qseq>CVVNSHLAAHTDGCERRNEDFRDVCARMSFQRDDPARTLLGVSNHDALIWLGDLNYRINNLRADEVKHLINNCDYKKLQANDQ----------------SELSFPPTYKYDPGTDNWDTS</Hsp_qseq>
      <Hsp_hseq>CVLVSHLAAGLENVEQRHNDYKTIAKSIRFSKG------LRIKDHDAIIWMGDFNYRIL-MSNEDVRRKIVSKEYASLFEKDQLNQQMIAGESFPYFHEMAIDFPPTYKFDPGTKNYDTS</Hsp_hseq>
      <Hsp_midline>CV+ SHLAA  +  E+R+ D++ +   + F +       L + +HDA+IW+GD NYRI  +  ++V+  I + +Y  L   DQ                  + FPPTYK+DPGT N+DTS</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YNL106C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:420944:424495:-1 gene:YNL106C transcript:YNL106C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INP52 description:Polyphosphatidylinositol phosphatase; dephosphorylates a number of phosphatidylinositol phosphates (PtdInsPs, PIPs) to PI; involved in endocytosis; hyperosmotic stress causes translocation to actin patches; synaptojanin-like protein with a Sac1 domain; INP52 has a paralog, INP53, that arose from the whole genome duplication [Source:SGD;Acc:S000005050]</Hit_def>
  <Hit_accession>YNL106C</Hit_accession>
  <Hit_len>1183</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>80.1073</Hsp_bit-score>
      <Hsp_score>196</Hsp_score>
      <Hsp_evalue>2.77094e-16</Hsp_evalue>
      <Hsp_query-from>280</Hsp_query-from>
      <Hsp_query-to>636</Hsp_query-to>
      <Hsp_hit-from>725</Hsp_hit-from>
      <Hsp_hit-to>880</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>54</Hsp_identity>
      <Hsp_positive>72</Hsp_positive>
      <Hsp_gaps>49</Hsp_gaps>
      <Hsp_align-len>162</Hsp_align-len>
      <Hsp_qseq>CVVNSHLAAHTDGCERRNEDFRDVCARMSFQRDDPARTLLGVSNHDALIWLGDLNYRIN--------NLRADEVKHLINNCDYKKL----------QANDQSELSFPPTYKYDPGTDNWDTS-------------------HPC------LRTSDHKPVSAA</Hsp_qseq>
      <Hsp_hseq>CFVNTHLSAGASNIDERRNDYNNIYRNITFPRSK------TIPHHDSLFWLGDLNYRITLTNDEVRRELRAQKDGYIDRLLQYDQLTQEINEGVVFQGFKEPTLQFRPTYKYDYGTDNYDTSEKARTPSWTDRIIYKGENLHPLAYSDAPLKISDHKPVYAA</Hsp_hseq>
      <Hsp_midline>C VN+HL+A     + R  D+ ++   ++F R         + +HD+L WLGDLNYRI          LRA +  ++     Y +L          Q   +  L F PTYKYD GTDN+DTS                   HP       L+ SDHKPV AA</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YOR109W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:525278:528601:1 gene:YOR109W transcript:YOR109W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:INP53 description:Polyphosphatidylinositol phosphatase; dephosphorylates multiple phosphatidylinositol phosphates; involved in trans Golgi network-to-early endosome pathway; hyperosmotic stress causes translocation to actin patches; contains Sac1 and 5-ptase domains; INP53 has a paralog, INP52, that arose from the whole genome duplication [Source:SGD;Acc:S000005635]</Hit_def>
  <Hit_accession>YOR109W</Hit_accession>
  <Hit_len>1107</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>73.9442</Hsp_bit-score>
      <Hsp_score>180</Hsp_score>
      <Hsp_evalue>2.2117e-14</Hsp_evalue>
      <Hsp_query-from>280</Hsp_query-from>
      <Hsp_query-to>591</Hsp_query-to>
      <Hsp_hit-from>700</Hsp_hit-from>
      <Hsp_hit-to>815</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>44</Hsp_identity>
      <Hsp_positive>58</Hsp_positive>
      <Hsp_gaps>24</Hsp_gaps>
      <Hsp_align-len>122</Hsp_align-len>
      <Hsp_qseq>CVVNSHLAAHTDGCERRNEDFRDVCARMSFQRDDPARTLLGVSNHDALIWLGDLNYRINNLRADEVKHLIN----------NCDYKKLQANDQS--------ELSFPPTYKYDPGTDNWDTS</Hsp_qseq>
      <Hsp_hseq>CFVNSHLAAGATNVEERRSDYESIVRGITFTRTK------MIPHHDSIFWLGDMNYRINLPNEDVRRELLNQEEGYIDKLLHFDQLTLGINSGSVFEGFKEPTLKFRPTYKYDPGTGTYDSS</Hsp_hseq>
      <Hsp_midline>C VNSHLAA     E R  D+  +   ++F R         + +HD++ WLGD+NYRIN    D  + L+N          + D   L  N  S         L F PTYKYDPGT  +D+S</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>93</Statistics_hsp-len>
      <Statistics_eff-space>904004931</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>6</Iteration_iter-num>
  <Iteration_query-ID>Query_6</Iteration_query-ID>
  <Iteration_query-def>PMZ_0041158-RA transcript Note:&quot;Protein of unknown function&quot; offset:322 AED:1.00 eAED:1.00 QI:322|0|0|0|0|0|5|204|113</Iteration_query-def>
  <Iteration_query-len>868</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>89</Statistics_hsp-len>
      <Statistics_eff-space>465333400</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>7</Iteration_iter-num>
  <Iteration_query-ID>Query_7</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059980-RA transcript Note:&quot;Similar to Fndc4 Fibronectin type III domain-containing protein 4 (Mus musculus)&quot; offset:0 AED:0.07 eAED:0.07 QI:0|0.5|0.2|1|1|0.8|5|909|195</Iteration_query-def>
  <Iteration_query-len>1497</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>94</Statistics_hsp-len>
      <Statistics_eff-space>928935135</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>8</Iteration_iter-num>
  <Iteration_query-ID>Query_8</Iteration_query-ID>
  <Iteration_query-def>PMZ_0011335-RA transcript Note:&quot;Similar to Txnl4b Thioredoxin-like protein 4B (Mus musculus)&quot; offset:34 AED:0.10 eAED:0.10 QI:34|1|0.33|1|0|0.33|3|1184|149</Iteration_query-def>
  <Iteration_query-len>1668</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YPR082C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:704225:704656:-1 gene:YPR082C transcript:YPR082C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DIB1 description:17-kDa component of the U4/U6aU5 tri-snRNP; plays an essential role in pre-mRNA splicing; human ortholog TXNL4A (the human U5-specific 15-kDa protein) complements yeast dib1 null mutant [Source:SGD;Acc:S000006286]</Hit_def>
  <Hit_accession>YPR082C</Hit_accession>
  <Hit_len>143</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>92.4337</Hsp_bit-score>
      <Hsp_score>228</Hsp_score>
      <Hsp_evalue>9.81432e-23</Hsp_evalue>
      <Hsp_query-from>38</Hsp_query-from>
      <Hsp_query-to>439</Hsp_query-to>
      <Hsp_hit-from>3</Hsp_hit-from>
      <Hsp_hit-to>136</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>46</Hsp_identity>
      <Hsp_positive>75</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>134</Hsp_align-len>
      <Hsp_qseq>SYMLPHLGSKAEVDAAIRNVADRVLVLRFGRSEEPSCRHLDETLWKTSHDLSKMAEIYLVDVGAVPVYTHYFDITVTPSTIFFFNGQHMKVDYGSPDHTKFVGSFKSKQDFIDLVEVIYRGAMRGKLMVRSPID</Hsp_qseq>
      <Hsp_hseq>SVLLPQLRTGWHVDQAIVTETKRLVVIRFGRKNDRQCMIMDELLSSIAERVRNFAVIYLCDIDEVSDFDEMYELTDPMTVMFFYHNKHMMCDFGTGNNNKLNFIVDDKQEMIDILETIFRGARKNKGLVVSPYD</Hsp_hseq>
      <Hsp_midline>S +LP L +   VD AI     R++V+RFGR  +  C  +DE L   +  +   A IYL D+  V  +   +++T   + +FF++ +HM  D+G+ ++ K       KQ+ ID++E I+RGA + K +V SP D</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>95</Statistics_hsp-len>
      <Statistics_eff-space>1054337887</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>9</Iteration_iter-num>
  <Iteration_query-ID>Query_9</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059985-RA transcript Note:&quot;Similar to CUL5 Cullin-5 (Homo sapiens)&quot; offset:0 AED:0.16 eAED:0.16 QI:0|0.46|0.43|0.93|1|1|16|1698|607</Iteration_query-def>
  <Iteration_query-len>3522</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YDL132W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:224304:226751:1 gene:YDL132W transcript:YDL132W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDC53 description:Cullin; structural protein of SCF complexes (which also contain Skp1p, Cdc34p, Hrt1p and an F-box protein) involved in ubiquitination; SCF promotes the G1-S transition by targeting G1 cyclins and the Cln-CDK inhibitor Sic1p for degradation; human homolog CUL1 can complement yeast cdc53 null mutant [Source:SGD;Acc:S000002290]</Hit_def>
  <Hit_accession>YDL132W</Hit_accession>
  <Hit_len>815</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>77.7962</Hsp_bit-score>
      <Hsp_score>190</Hsp_score>
      <Hsp_evalue>6.66003e-15</Hsp_evalue>
      <Hsp_query-from>742</Hsp_query-from>
      <Hsp_query-to>1491</Hsp_query-to>
      <Hsp_hit-from>386</Hsp_hit-from>
      <Hsp_hit-to>654</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>75</Hsp_identity>
      <Hsp_positive>126</Hsp_positive>
      <Hsp_gaps>59</Hsp_gaps>
      <Hsp_align-len>289</Hsp_align-len>
      <Hsp_qseq>LKDLEEHIVSAGLADMVATAESITTAYKAVVNDATIFKLELPSKQKGLSSKTQPESKCPELLANYCDMLLRKTPLSKKLTSEEI--DAKLREVLLVLKYVQNKDVFMRYHKAHLTRRLILDISADSETEENMVEWLREVGMPADYVNKLARMFQDIKVSEDLNQAFKEMHKNN---KLAMADSVNIKILNAGAWSRSSEKMFVSLPTELEDLIPENE-----------------------------VGQ-----YDLEVTTFQLAILFAWNQRQRDRISFENLRLATEL</Hsp_qseq>
      <Hsp_hseq>VHDIFSKIFNESFPDDIPLAKALDNACGAFIN---INEFALPA-----GSPKSATSKTSEMLAKYSDILL------KKATKPEVASDMSDEDIITIFKYLTDKDAFETHYRRLFAKRLIHGTSTSAEDEENIIQRL-QAANSMEYTGKITKMFQDIRLSKILEDDFAVALKNEPDYSKAKYPDLQPFVLAENMWPFSYQEVEFKLPKE---LVPSHEKLKESYSQKHNGRILKWLWPLCRGELKADIGKPGRMPFNFTVTLFQMAILLLYN--DADVLTLENIQEGTSL</Hsp_hseq>
      <Hsp_midline>+ D+   I +    D +  A+++  A  A +N   I +  LP+      S     SK  E+LA Y D+LL      KK T  E+  D    +++ + KY+ +KD F  +++    +RLI   S  +E EEN+++ L +     +Y  K+ +MFQDI++S+ L   F    KN      A    +   +L    W  S +++   LP E   L+P +E                             +G+     ++  VT FQ+AIL  +N    D ++ EN++  T L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>101</Statistics_hsp-len>
      <Statistics_eff-space>2411532091</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>10</Iteration_iter-num>
  <Iteration_query-ID>Query_10</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059986-RA transcript Note:&quot;Similar to RAB39B Ras-related protein Rab-39B (Bos taurus)&quot; offset:0 AED:0.28 eAED:0.28 QI:0|0|0|0.5|1|1|4|0|213</Iteration_query-def>
  <Iteration_query-len>642</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YER031C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:214076:214747:-1 gene:YER031C transcript:YER031C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT31 description:Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi [Source:SGD;Acc:S000000833]</Hit_def>
  <Hit_accession>YER031C</Hit_accession>
  <Hit_len>223</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>107.842</Hsp_bit-score>
      <Hsp_score>268</Hsp_score>
      <Hsp_evalue>1.32565e-29</Hsp_evalue>
      <Hsp_query-from>28</Hsp_query-from>
      <Hsp_query-to>498</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>177</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>57</Hsp_identity>
      <Hsp_positive>96</Hsp_positive>
      <Hsp_gaps>15</Hsp_gaps>
      <Hsp_align-len>168</Hsp_align-len>
      <Hsp_qseq>YSVIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWV----LVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPPSGMAFVLVGHKCDL-------QGQGERFASAHGMAYVEATARRGVGVEEAFVELVTAIHAR</Hsp_qseq>
      <Hsp_hseq>FKIVLIGDSGVGKSNLLSRFTKNEFNMDSKSTIGVEFATRTLEID---GKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSELR-ENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTIYQK</Hsp_hseq>
      <Hsp_midline>+ ++++GD+ VGK+ LL RF +  +  +S  T+GV+F  RTL +    G+R+KA I++        +IT +YY+GA GAL+VYD+S+  SY +   WL+E R       +A  L+G+K DL         + + FA  + + + E +A     V++AF EL+  I+ +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YGL210W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:93792:94460:1 gene:YGL210W transcript:YGL210W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT32 description:Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication [Source:SGD;Acc:S000003178]</Hit_def>
  <Hit_accession>YGL210W</Hit_accession>
  <Hit_len>222</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>104.76</Hsp_bit-score>
      <Hsp_score>260</Hsp_score>
      <Hsp_evalue>1.90868e-28</Hsp_evalue>
      <Hsp_query-from>22</Hsp_query-from>
      <Hsp_query-to>489</Hsp_query-to>
      <Hsp_hit-from>12</Hsp_hit-from>
      <Hsp_hit-to>174</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>58</Hsp_identity>
      <Hsp_positive>93</Hsp_positive>
      <Hsp_gaps>15</Hsp_gaps>
      <Hsp_align-len>167</Hsp_align-len>
      <Hsp_qseq>YQYSVIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWV----LVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPPSGMAFVLVGHKCDL-------QGQGERFASAHGMAYVEATARRGVGVEEAFVELVTAI</Hsp_qseq>
      <Hsp_hseq>YLFKIVLIGDSGVGKSNLLSRFTTDEFNIESKSTIGVEFATRTIEV---ENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTELR-ENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELIVAI</Hsp_hseq>
      <Hsp_midline>Y + ++++GD+ VGK+ LL RF    +  ES  T+GV+F  RT+ +     +++KA I++        +IT +YY+GA GAL+VYD+S+  SY +   WL E R       +A  L+G+K DL         + + FA  + M + E +A     V++AF EL+ AI</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YFL038C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:55366:55986:-1 gene:YFL038C transcript:YFL038C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT1 description:Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles [Source:SGD;Acc:S000001856]</Hit_def>
  <Hit_accession>YFL038C</Hit_accession>
  <Hit_len>206</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>100.908</Hsp_bit-score>
      <Hsp_score>250</Hsp_score>
      <Hsp_evalue>4.23959e-27</Hsp_evalue>
      <Hsp_query-from>22</Hsp_query-from>
      <Hsp_query-to>492</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>170</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>56</Hsp_identity>
      <Hsp_positive>96</Hsp_positive>
      <Hsp_gaps>15</Hsp_gaps>
      <Hsp_align-len>168</Hsp_align-len>
      <Hsp_qseq>YQYSVIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWV----LVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPPSGMAFVLVGHKCDLQGQ-------GERFASAHGMAYVEATARRGVGVEEAFVELVTAIH</Hsp_qseq>
      <Hsp_hseq>YLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELD---GKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYATSTVLK-LLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIK</Hsp_hseq>
      <Hsp_midline>Y + ++++G++ VGK+ LL RF + TY  +   T+GVDF I+T+ L    G+ VK  I++        +IT SYY+G+ G ++VYDV+ + S+  +  WL E   +   + +  +LVG+KCDL+ +        + FA A+ M ++E +A     VE+AF+ +   I </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YFL005W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:130334:130981:1 gene:YFL005W transcript:YFL005W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEC4 description:Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane [Source:SGD;Acc:S000001889]</Hit_def>
  <Hit_accession>YFL005W</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>96.6709</Hsp_bit-score>
      <Hsp_score>239</Hsp_score>
      <Hsp_evalue>2.15318e-25</Hsp_evalue>
      <Hsp_query-from>34</Hsp_query-from>
      <Hsp_query-to>498</Hsp_query-to>
      <Hsp_hit-from>23</Hsp_hit-from>
      <Hsp_hit-to>183</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>52</Hsp_identity>
      <Hsp_positive>88</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>165</Hsp_align-len>
      <Hsp_qseq>VIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWV----LVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPPSGMAFVLVGHKCDLQ------GQGERFASAHGMAYVEATARRGVGVEEAFVELVTAIHAR</Hsp_qseq>
      <Hsp_hseq>ILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDIN---GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNEHANDEAQ-LLLVGNKSDMETRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQEK</Hsp_hseq>
      <Hsp_midline>++++GD+ VGK+ LL RFVE  +      T+G+DF I+T+ +    G++VK  +++        +IT +YY+GA G +LVYDV+   ++ +I  W      H        +LVG+K D++       QGE  A   G+ ++E++A+    V E F  L   I  +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YOR089C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:490196:490828:-1 gene:YOR089C transcript:YOR089C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VPS21 description:Endosomal Rab family GTPase; required for endocytic transport and sorting of vacuolar hydrolases; required for endosomal localization of the CORVET complex; required with YPT52 for MVB biogenesis and sorting; involved in autophagy and ionic stress tolerance; geranylgeranylation required for membrane association; protein abundance increases in response to DNA replication stress; mammalian Rab5 homolog; VPS21 has a paralog, YPT53, that arose from the whole genome duplication [Source:SGD;Acc:S000005615]</Hit_def>
  <Hit_accession>YOR089C</Hit_accession>
  <Hit_len>210</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>81.2629</Hsp_bit-score>
      <Hsp_score>199</Hsp_score>
      <Hsp_evalue>1.30885e-19</Hsp_evalue>
      <Hsp_query-from>34</Hsp_query-from>
      <Hsp_query-to>639</Hsp_query-to>
      <Hsp_hit-from>10</Hsp_hit-from>
      <Hsp_hit-to>210</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>58</Hsp_identity>
      <Hsp_positive>102</Hsp_positive>
      <Hsp_gaps>31</Hsp_gaps>
      <Hsp_align-len>217</Hsp_align-len>
      <Hsp_qseq>VIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWV----LVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPPS-GMAFVLVGHKCDL----------QGQGERFASAHGMAYVEATARRGVGVEEAFVELVTAIHARTVXXXXXXXXXXXXXXXXXGVRITERPDRAGSTPGRSSRRAGLGCSC</Hsp_qseq>
      <Hsp_hseq>LVLLGEAAVGKSSIVLRFVSNDFAENKEPTIGAAFLTQRVTINE---HTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKE--LHEQASKDIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVFLGIGEKIPLKTAEEQNSASNERESN--------NQRVDLNAANDGTSANSA---CSC</Hsp_hseq>
      <Hsp_midline>+++LG+A VGK++++ RFV   + E  +PT+G  F  + + +       VK  I++        S+   YY+ A  AL+VYDV++  S++    W+ E  +H   S  +   LVG+K D+          + +GE+ A   G+ + E +A+ G  V + F+ +   I  +T   + S+S               +R D   +  G S+  A   CSC</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YKR014C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:465367:466071:-1 gene:YKR014C transcript:YKR014C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT52 description:Endosomal Rab family GTPase; required for vacuolar protein sorting, endocytosis and multivesicular body (MVB) biogenesis and sorting; required for localization of the CORVET complex to endosomes; involved in autophagy and ionic stress tolerance; similar to Vps21p and Ypt53p; mammalian Rab5 homolog; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000001722]</Hit_def>
  <Hit_accession>YKR014C</Hit_accession>
  <Hit_len>234</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>79.7221</Hsp_bit-score>
      <Hsp_score>195</Hsp_score>
      <Hsp_evalue>7.61745e-19</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>477</Hsp_query-to>
      <Hsp_hit-from>3</Hsp_hit-from>
      <Hsp_hit-to>189</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>44</Hsp_identity>
      <Hsp_positive>90</Hsp_positive>
      <Hsp_gaps>36</Hsp_gaps>
      <Hsp_align-len>187</Hsp_align-len>
      <Hsp_qseq>QYSVIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWVL---------VSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPPSGMAFVLVGHKCDL---------------------------QGQGERFASAHGMAYVEATARRGVGVEEAFVEL</Hsp_qseq>
      <Hsp_hseq>QFKLVLLGDSSVGKSSIVHRFVKDTFDELRESTIGAAFLSQSITIHPNDGNETKDVVIKFEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLGNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDI</Hsp_hseq>
      <Hsp_midline>Q+ +++LGD++VGK++++ RFV+ T+ E  + T+G  F  +++ + P+ G   K  + ++ +          S+   YY+ A  AL+VYD+++  S     +W+ E +       +   L+G+K DL                             + +++A   G+ + E +A+ G GV+E F ++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YML001W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:267174:267800:1 gene:YML001W transcript:YML001W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT7 description:Rab family GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); interacts with the cargo selection/retromer complex for retrograde sorting; similar to mammalian Rab7 [Source:SGD;Acc:S000004460]</Hit_def>
  <Hit_accession>YML001W</Hit_accession>
  <Hit_len>208</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>76.2554</Hsp_bit-score>
      <Hsp_score>186</Hsp_score>
      <Hsp_evalue>1.05079e-17</Hsp_evalue>
      <Hsp_query-from>34</Hsp_query-from>
      <Hsp_query-to>477</Hsp_query-to>
      <Hsp_hit-from>11</Hsp_hit-from>
      <Hsp_hit-to>172</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>45</Hsp_identity>
      <Hsp_positive>81</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>162</Hsp_align-len>
      <Hsp_qseq>VIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPD--AGRRVKASIYEWVLVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIH---GPPSGMAFVLVGHKCDLQGQGERFASAHGMAYVEA---------TARRGVGVEEAFVEL</Hsp_qseq>
      <Hsp_hseq>VIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEI</Hsp_hseq>
      <Hsp_midline>VI+LGD+ VGKT+L+ R+V   Y ++   T+G DF  + + +  D  A  +V  +  +    S+  ++Y+GA   +LVYDV+   S+ +I  W  E  +H     P    FV++G+K D +   +  +        ++         +A+  + V+ AF E+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YLR262C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:668244:668891:-1 gene:YLR262C transcript:YLR262C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT6 description:Rab family GTPase; required for endosome-to-Golgii, intra-Golgi retrograde, and retrograde Golgi-to-ER transport; temporarily at the Golgi, dissociating into the cytosol on arrival of the late Golgi GTPase Ypt32p; Golgi-localized form is GTP bound, while cytosolic form is GDP-bound; required for delivery of Atg9p to the phagophore assembly site during autophagy under heat stress, with Ypt6p for starvation induced autophagy and for the CVT pathway; homolog of mammalian Rab6 [Source:SGD;Acc:S000004252]</Hit_def>
  <Hit_accession>YLR262C</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>74.7146</Hsp_bit-score>
      <Hsp_score>182</Hsp_score>
      <Hsp_evalue>4.50242e-17</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>489</Hsp_query-to>
      <Hsp_hit-from>10</Hsp_hit-from>
      <Hsp_hit-to>173</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>41</Hsp_identity>
      <Hsp_positive>87</Hsp_positive>
      <Hsp_gaps>15</Hsp_gaps>
      <Hsp_align-len>167</Hsp_align-len>
      <Hsp_qseq>QYSVIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWV----LVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPPSGMAFVLVGHKCDLQG-------QGERFASAHGMA-YVEATARRGVGVEEAFVELVTAI</Hsp_qseq>
      <Hsp_hseq>KYKIVFLGEQGVGKTSLITRFMYDTFDDHYQATIGIDFLSKTMYLD---DKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSL</Hsp_hseq>
      <Hsp_midline>+Y ++ LG+  VGKT+L+ RF+  T+ +    T+G+DF  +T+ L     + ++  +++        S+  SY + +  A++VYD+++R S+ +I  W+ + +       +   +VG+K DL         +GE+ A   G   ++E + + G  V+  F ++  ++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YNL093W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:449868:450530:1 gene:YNL093W transcript:YNL093W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT53 description:Stress-induced Rab family GTPase; required for vacuolar protein sorting and endocytosis; involved in ionic stress tolerance; similar to Vps21p and Ypt52p; functional homolog of Vps21p; mammalian Rab5 homolog; YPT53 has a paralog, VPS21, that arose from the whole genome duplication [Source:SGD;Acc:S000005037]</Hit_def>
  <Hit_accession>YNL093W</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>65.0846</Hsp_bit-score>
      <Hsp_score>157</Hsp_score>
      <Hsp_evalue>1.63913e-13</Hsp_evalue>
      <Hsp_query-from>31</Hsp_query-from>
      <Hsp_query-to>477</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>175</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>42</Hsp_identity>
      <Hsp_positive>76</Hsp_positive>
      <Hsp_gaps>23</Hsp_gaps>
      <Hsp_align-len>167</Hsp_align-len>
      <Hsp_qseq>SVIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWV----LVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPP-SGMAFVLVGHKCDLQGQG-------------ERFASAHGMAYVEATARRGVGVEEAFVEL</Hsp_qseq>
      <Hsp_hseq>KVVLLGESAVGKSSIVLRFVSDDFKESKEPTIGAAFLTKRITRD---GKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEE--LHEKVGHDIVIALVGNKMDLLNNDDENENRAMKAPAVQNLCERENLLYFEASAKTGENIYQIFQTL</Hsp_hseq>
      <Hsp_midline> V++LG++ VGK++++ RFV   + E  +PT+G  F  + +      G+ +K  I++         +   YY+ A  AL+V+DV+   S+    +W+ E  +H      +   LVG+K DL                 +       + Y EA+A+ G  + + F  L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YBR264C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:737770:738369:-1 gene:YBR264C transcript:YBR264C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT10 description:Rab family GTP-binding protein; contains the PEST signal sequence specific for proteolytic enzymes; may be involved in vesicular transport; overexpression leads to accumulation of Golgi-like cisternae with budding vesicles [Source:SGD;Acc:S000000468]</Hit_def>
  <Hit_accession>YBR264C</Hit_accession>
  <Hit_len>199</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>2.85907e-09</Hsp_evalue>
      <Hsp_query-from>34</Hsp_query-from>
      <Hsp_query-to>639</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>199</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>46</Hsp_identity>
      <Hsp_positive>91</Hsp_positive>
      <Hsp_gaps>39</Hsp_gaps>
      <Hsp_align-len>217</Hsp_align-len>
      <Hsp_qseq>VIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAG---RRVKASIYEWV----LVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPPSGMAFVLVGHKCDL-----QGQGERFASAHGMAYVEATARRGVG---VEEAFVELVTAIHARTVXXXXXXXXXXXXXXXXXGVRITERPDRAGSTPGRSSRRAGLGCSC</Hsp_qseq>
      <Hsp_hseq>VVLLGDSSVGKTSIVTRLKSGKFLAKHAATIGAAFITKTIEVPSNDSSTEKRIHMEIWDTAGQERYKSLVPMYYRDANIALIVFELGDVSSLQCAKTWFQD--LQDRAQGTQVIIVGNKYDLVCEEHSGEVTIPAELQGLPYVAVSAKTGYNFDTLNKIIISLVPESQFKTL----------------------SKNNEQGNILEINKKKSGSGCIC</Hsp_hseq>
      <Hsp_midline>V++LGD++VGKT+++ R   G +  +   T+G  F  +T+ +  +     +R+   I++        S+   YY+ A  AL+V+++    S      W  +  +     G   ++VG+K DL      G+    A   G+ YV  +A+ G     + +  + LV     +T+                       + +  G+    + +++G GC C</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YOR101W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:515244:516173:1 gene:YOR101W transcript:YOR101W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAS1 description:GTPase involved in G-protein signaling in adenylate cyclase activation; plays a role in cell proliferation; localized to the plasma membrane; homolog of mammalian RAS proto-oncogenes; relative distribution to the nucleus increases upon DNA replication stress; RAS1 has a paralog, RAS2, that arose from the whole genome duplication [Source:SGD;Acc:S000005627]</Hit_def>
  <Hit_accession>YOR101W</Hit_accession>
  <Hit_len>309</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>52.373</Hsp_bit-score>
      <Hsp_score>124</Hsp_score>
      <Hsp_evalue>1.04069e-08</Hsp_evalue>
      <Hsp_query-from>25</Hsp_query-from>
      <Hsp_query-to>480</Hsp_query-to>
      <Hsp_hit-from>10</Hsp_hit-from>
      <Hsp_hit-to>168</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>81</Hsp_positive>
      <Hsp_gaps>23</Hsp_gaps>
      <Hsp_align-len>167</Hsp_align-len>
      <Hsp_qseq>QYSVIVLGDATVGKTALLRRFVEGTYGEESDPTVG--------VDFFIRTLALGPDAGRRVKASIYEWVLVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPPSGMAFVLVGHKCDLQGQ-------GERFASAHGMAYVEATARRGVGVEEAFVELV</Hsp_qseq>
      <Hsp_hseq>EYKIVVVGGGGVGKSALTIQFIQSYFVDEYDPTIEDSYRKQVVIDDKVSILDILDTAGQEEYSAMREQ--------YMRTGEGFLLVYSVTSRNSFDELLSYYQQIQRVKDSDYIPVVVVGNKLDLENERQVSYEDGLRLAKQLNAPFLETSAKQAINVDEAFYSLI</Hsp_hseq>
      <Hsp_midline>+Y ++V+G   VGK+AL  +F++  + +E DPT+         +D  +  L +   AG+   +++ E         Y +   G LLVY V+ R S+  +  +  + +       +  V+VG+K DL+ +       G R A      ++E +A++ + V+EAF  L+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YKR055W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:548216:549091:1 gene:YKR055W transcript:YKR055W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO4 description:Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi [Source:SGD;Acc:S000001763]</Hit_def>
  <Hit_accession>YKR055W</Hit_accession>
  <Hit_len>291</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>3.81939e-08</Hsp_evalue>
      <Hsp_query-from>22</Hsp_query-from>
      <Hsp_query-to>495</Hsp_query-to>
      <Hsp_hit-from>71</Hsp_hit-from>
      <Hsp_hit-to>237</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>48</Hsp_identity>
      <Hsp_positive>80</Hsp_positive>
      <Hsp_gaps>25</Hsp_gaps>
      <Hsp_align-len>175</Hsp_align-len>
      <Hsp_qseq>YQYSVIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWV----LVSITRSYYQGAAGALLVYDVSRRPSYLHIAD-WLAEARIHGPPSGMAFVLVGHKCDL-----------QGQGERFASAHG-MAYVEATARRGVGVEEAFVELVTAIHA</Hsp_qseq>
      <Hsp_hseq>YHLKIVVVGDGAVGKTCLLISYVQGTFPTDYIPTIFENYV--TNIEGPN-GQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDLWFPEVK-HFCPS-TPIMLVGLKSDLYEADNLSDLVEPSSAESLAKRLGAFAHIQCSARLKENIDEVF---ETAIHT</Hsp_hseq>
      <Hsp_midline>Y   ++V+GD  VGKT LL  +V+GT+  +  PT+  ++   T   GP+ G+ ++ ++++         +    Y  A   ++ Y V  + S  ++ D W  E + H  PS    +LVG K DL               E  A   G  A+++ +AR    ++E F    TAIH </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YGR152C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:794674:795492:-1 gene:YGR152C transcript:YGR152C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSR1 description:GTP-binding protein of the Ras superfamily; required for bud site selection, morphological changes in response to mating pheromone, and efficient cell fusion; localized to the plasma membrane; significantly similar to mammalian Rap GTPases [Source:SGD;Acc:S000003384]</Hit_def>
  <Hit_accession>YGR152C</Hit_accession>
  <Hit_len>272</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>3.83824e-08</Hsp_evalue>
      <Hsp_query-from>28</Hsp_query-from>
      <Hsp_query-to>489</Hsp_query-to>
      <Hsp_hit-from>4</Hsp_hit-from>
      <Hsp_hit-to>165</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>47</Hsp_identity>
      <Hsp_positive>77</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>165</Hsp_align-len>
      <Hsp_qseq>YSVIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGP---DAGRRVKASIYEWVLVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPPSGMAFVLVGHKCDLQG-------QGERFASAHG-MAYVEATARRGVGVEEAFVELVTAI</Hsp_qseq>
      <Hsp_hseq>YKLVVLGAGGVGKSCLTVQFVQGVYLDTYDPTIE-DSYRKTIEIDNKVFDLEILDTAGIAQF--TAMRELYIKSGMGFLLVYSVTDRQSLEELMELREQVLRIKDSDRVPMVLIGNKADLINERVISVEEGIEVSSKWGRVPFYETSALLRSNVDEVFVDLVRQI</Hsp_hseq>
      <Hsp_midline>Y ++VLG   VGK+ L  +FV+G Y +  DPT+  D + +T+ +     D      A I ++   ++   Y +   G LLVY V+ R S   + +   +         +  VL+G+K DL         +G   +S  G + + E +A     V+E FV+LV  I</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YLR293C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:720771:721430:-1 gene:YLR293C transcript:YLR293C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GSP1 description:Ran GTPase; GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; regulated by Srm1p, Rna1p, Yrb1p, Yrb2p, Yrp4p, Yrb30p, Cse1p and Kap95p; GSP1 has a paralog, GSP2, that arose from the whole genome duplication [Source:SGD;Acc:S000004284]</Hit_def>
  <Hit_accession>YLR293C</Hit_accession>
  <Hit_len>219</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.521</Hsp_bit-score>
      <Hsp_score>114</Hsp_score>
      <Hsp_evalue>1.17067e-07</Hsp_evalue>
      <Hsp_query-from>28</Hsp_query-from>
      <Hsp_query-to>477</Hsp_query-to>
      <Hsp_hit-from>13</Hsp_hit-from>
      <Hsp_hit-to>166</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>78</Hsp_positive>
      <Hsp_gaps>16</Hsp_gaps>
      <Hsp_align-len>160</Hsp_align-len>
      <Hsp_qseq>YSVIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWV----LVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAE-ARIHGPPSGMAFVLVGHKCDLQGQGER-----FASAHGMAYVEATARRGVGVEEAFVEL</Hsp_qseq>
      <Hsp_hseq>FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVE--VHPLSFYTNFG-EIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC---ENIPIVLCGNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWL</Hsp_hseq>
      <Hsp_midline>+ ++++GD   GKT  ++R + G + ++   T+GV+  +  L+   + G  +K  +++         +   YY  A  A++++DV+ R +Y ++ +W  +  R+      +  VL G+K D++ +  +     F     + Y + +A+     E+ F+ L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YOR185C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:681444:682106:-1 gene:YOR185C transcript:YOR185C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GSP2 description:GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication [Source:SGD;Acc:S000005711]</Hit_def>
  <Hit_accession>YOR185C</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.521</Hsp_bit-score>
      <Hsp_score>114</Hsp_score>
      <Hsp_evalue>1.24933e-07</Hsp_evalue>
      <Hsp_query-from>28</Hsp_query-from>
      <Hsp_query-to>477</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>167</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>78</Hsp_positive>
      <Hsp_gaps>16</Hsp_gaps>
      <Hsp_align-len>160</Hsp_align-len>
      <Hsp_qseq>YSVIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWV----LVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAE-ARIHGPPSGMAFVLVGHKCDLQGQGER-----FASAHGMAYVEATARRGVGVEEAFVEL</Hsp_qseq>
      <Hsp_hseq>FKLVLVGDGGTGKTTFVKRHLTGEFEKKYIATIGVE--VHPLSFYTNFG-EIKFDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRVC---ENIPIVLCGNKVDVKERKVKAKTITFHRKKNLQYYDISAKSNYNFEKPFLWL</Hsp_hseq>
      <Hsp_midline>+ ++++GD   GKT  ++R + G + ++   T+GV+  +  L+   + G  +K  +++         +   YY  A  A++++DV+ R +Y ++ +W  +  R+      +  VL G+K D++ +  +     F     + Y + +A+     E+ F+ L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YML064C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:145139:145876:-1 gene:YML064C transcript:YML064C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TEM1 description:GTP-binding protein of the Ras superfamily; involved in termination of M-phase; controls actomyosin and septin dynamics during cytokinesis [Source:SGD;Acc:S000004529]</Hit_def>
  <Hit_accession>YML064C</Hit_accession>
  <Hit_len>245</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.521</Hsp_bit-score>
      <Hsp_score>114</Hsp_score>
      <Hsp_evalue>1.33235e-07</Hsp_evalue>
      <Hsp_query-from>13</Hsp_query-from>
      <Hsp_query-to>378</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>136</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>37</Hsp_identity>
      <Hsp_positive>65</Hsp_positive>
      <Hsp_gaps>17</Hsp_gaps>
      <Hsp_align-len>131</Hsp_align-len>
      <Hsp_qseq>GVRYQYSVIV--LGDATVGKTALLRRFVEGTYGEESDPTVGVDFFIRTLALGPDAGRRVKASIYEWVLVSITRSYYQ-------GAAGALLVYDVSRRPSYLHIADWLAEARIHGPPSGMAFVLVGHKCDL</Hsp_qseq>
      <Hsp_hseq>AVRNQVEVQVGLVGDAQVGKTSLMVKYVQNIYDKEYTQTLGVNFLKRKVSI------RSTDIIFSIMDLGGQREFINMLPIATVGSSVIIFLFDLTRPETLSSIKEWYRQA--YGLNDSAIPILVGTKYDL</Hsp_hseq>
      <Hsp_midline> VR Q  V V  +GDA VGKT+L+ ++V+  Y +E   T+GV+F  R +++      R    I+  + +   R +         G++  + ++D++R  +   I +W  +A  +G       +LVG K DL</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>17</Hit_num>
  <Hit_id>YCR027C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:III:167370:167999:-1 gene:YCR027C transcript:YCR027C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHB1 description:Putative Rheb-related GTPase; involved in regulating canavanine resistance and arginine uptake; member of the Ras superfamily of G-proteins [Source:SGD;Acc:S000000622]</Hit_def>
  <Hit_accession>YCR027C</Hit_accession>
  <Hit_len>209</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.595</Hsp_bit-score>
      <Hsp_score>109</Hsp_score>
      <Hsp_evalue>4.97705e-07</Hsp_evalue>
      <Hsp_query-from>19</Hsp_query-from>
      <Hsp_query-to>492</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>190</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>48</Hsp_identity>
      <Hsp_positive>74</Hsp_positive>
      <Hsp_gaps>35</Hsp_gaps>
      <Hsp_align-len>185</Hsp_align-len>
      <Hsp_qseq>RYQYSVIVLGDATVGKTALLRRFVEGTYGEESDPTVGVDF--------FIRTLALGPDAGRRVKASIYEWVLVSITRSYYQGAAGALLVYDVSRRPSYLHIADWLAEARIHGPPSGMAFVLVGHKCDL------------QGQGERFASAHG-------MAYVEATARRGVGVEEAFVELVTAIH</Hsp_qseq>
      <Hsp_hseq>NFQRKIALIGARNVGKTTLTVRFVESRFVESYYPTIENEFTRIIPYKSHDCTLEILDTAGQD------EVSLLNI--KSLTGVRGIILCYSIINRASFDLIPILWDKLVDQLGKDNLPVILVGTKADLGRSTKGVKRCVTKAEGEKLASTIGSQDKRNQAAFIECSAELDYNVEETFMLLLKQME</Hsp_hseq>
      <Hsp_midline> +Q  + ++G   VGKT L  RFVE  + E   PT+  +F           TL +   AG+       E  L++I      G  G +L Y +  R S+  I     +         +  +LVG K DL            + +GE+ AS  G        A++E +A     VEE F+ L+  + </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>18</Hit_num>
  <Hit_id>YIL118W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:139752:140447:1 gene:YIL118W transcript:YIL118W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO3 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p [Source:SGD;Acc:S000001380]</Hit_def>
  <Hit_accession>YIL118W</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.595</Hsp_bit-score>
      <Hsp_score>109</Hsp_score>
      <Hsp_evalue>6.92185e-07</Hsp_evalue>
      <Hsp_query-from>34</Hsp_query-from>
      <Hsp_query-to>387</Hsp_query-to>
      <Hsp_hit-from>19</Hsp_hit-from>
      <Hsp_hit-to>135</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>39</Hsp_identity>
      <Hsp_positive>60</Hsp_positive>
      <Hsp_gaps>21</Hsp_gaps>
      <Hsp_align-len>128</Hsp_align-len>
      <Hsp_qseq>VIVLGDATVGKTALLRRFVEGTYGEESDPTVGV----DFFIR----TLALGPDAGRRVKASIYEWV-LVSITRSYYQGAAGALLVYDVSRRPSYLHIAD-WLAEARIHGPPSGMAFVLVGHKCDLQGQ</Hsp_qseq>
      <Hsp_hseq>IVILGDGACGKTSLLNVFTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQE------EFDRLRSLS---YSDTQCIMLCFSIDSRDSLENVQNKWVGEITDHCE--GVKLVLVALKCDLRNN</Hsp_hseq>
      <Hsp_midline>+++LGD   GKT+LL  F  G + E  +PTV      D F+     TL+L   AG+       E+  L S++   Y      +L + +  R S  ++ + W+ E   H    G+  VLV  KCDL+  </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>86</Statistics_hsp-len>
      <Statistics_eff-space>300347776</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>11</Iteration_iter-num>
  <Iteration_query-ID>Query_11</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059987-RA transcript Note:&quot;Similar to PRRG1 Transmembrane gamma-carboxyglutamic acid protein 1 (Pongo abelii)&quot; offset:269 AED:0.44 eAED:0.74 QI:269|0.5|0.6|1|0.75|0.6|5|0|261</Iteration_query-def>
  <Iteration_query-len>1055</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>601501420</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>12</Iteration_iter-num>
  <Iteration_query-ID>Query_12</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059989-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.24 eAED:1.00 QI:0|0|0|0.5|1|1|2|0|359</Iteration_query-def>
  <Iteration_query-len>1080</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>622322623</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>13</Iteration_iter-num>
  <Iteration_query-ID>Query_13</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059993-RA transcript Note:&quot;Similar to Prdm1 PR domain zinc finger protein 1 (Mus musculus)&quot; offset:51 AED:0.05 eAED:0.05 QI:51|0.66|0.57|1|1|1|7|1624|901</Iteration_query-def>
  <Iteration_query-len>4381</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YJL056C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:330431:333073:-1 gene:YJL056C transcript:YJL056C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZAP1 description:Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains [Source:SGD;Acc:S000003592]</Hit_def>
  <Hit_accession>YJL056C</Hit_accession>
  <Hit_len>880</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>116.316</Hsp_bit-score>
      <Hsp_score>290</Hsp_score>
      <Hsp_evalue>1.26799e-26</Hsp_evalue>
      <Hsp_query-from>1738</Hsp_query-from>
      <Hsp_query-to>2115</Hsp_query-to>
      <Hsp_hit-from>734</Hsp_hit-from>
      <Hsp_hit-to>859</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>52</Hsp_identity>
      <Hsp_positive>86</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>128</Hsp_align-len>
      <Hsp_qseq>GKTIYEC--NICGKTFGQLSNLKVHLRIHSGERPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFSSTSNLKTHLRLHSGEKPFQCKLCPAKFTQFIHLKLHRRLHARERPHRCADCQRSY</Hsp_qseq>
      <Hsp_hseq>GKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSF</Hsp_hseq>
      <Hsp_midline>GK+ Y+C  + C +TF Q   L  HL++HS  +P+KC+TC + F+    L +H   H+GEKPY+C +C ++F+ +S+LK H+R H+GEKP QCK+C  +F +  +L  H + H  ++ ++C+DC +S+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>91.6633</Hsp_bit-score>
      <Hsp_score>226</Hsp_score>
      <Hsp_evalue>5.38192e-19</Hsp_evalue>
      <Hsp_query-from>1672</Hsp_query-from>
      <Hsp_query-to>2145</Hsp_query-to>
      <Hsp_hit-from>679</Hsp_hit-from>
      <Hsp_hit-to>843</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>57</Hsp_identity>
      <Hsp_positive>83</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>165</Hsp_align-len>
      <Hsp_qseq>SRAKG--NLTVNGHTVPYPLKKQNGKTIYECNICGKTFGQLSNLKVHLR---IHSGERPFKC--QTCGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFSSTSNLKTHLRLHSGEKPFQCKLCPAKFTQFIHLKLHRRLHARERPHRCADCQRSYIHQISLSLHL</Hsp_qseq>
      <Hsp_hseq>SKADGAPDMTSANDVSNIPPIKQPEQVICQWDGCNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHI</Hsp_hseq>
      <Hsp_midline>S+A G  ++T        P  KQ  + I + + C K+F     L  HL    +  G+  ++C    C + F Q   L +H  VH+  KPY+C+ C R FSS   L  H R HSGEKP++C +C  KF     LK+H R H  E+P +C  C + +    +LS H+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>71.633</Hsp_bit-score>
      <Hsp_score>174</Hsp_score>
      <Hsp_evalue>7.67626e-13</Hsp_evalue>
      <Hsp_query-from>1738</Hsp_query-from>
      <Hsp_query-to>1971</Hsp_query-to>
      <Hsp_hit-from>792</Hsp_hit-from>
      <Hsp_hit-to>867</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>49</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>78</Hsp_align-len>
      <Hsp_qseq>GKTIYECNICGKTFGQLSNLKVHLRIHSGERPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFSSTSNLKT</Hsp_qseq>
      <Hsp_hseq>GEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKH--IKTHQKKYKCSDCSKSFDDLGKLNS</Hsp_hseq>
      <Hsp_midline>G+  Y+C+IC K F   S+LK+H+R H+GE+P +C+ CGK F + ++L KH  + T +K Y+C  C + F     L +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YOR113W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:534075:536819:1 gene:YOR113W transcript:YOR113W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AZF1 description:Zinc-finger transcription factor; involved in diauxic shift; in the presence of glucose, activates transcription of genes involved in growth and carbon metabolism; in nonfermentable carbon sources, activates transcription of genes involved in maintenance of cell wall integrity; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005639]</Hit_def>
  <Hit_accession>YOR113W</Hit_accession>
  <Hit_len>914</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>110.153</Hsp_bit-score>
      <Hsp_score>274</Hsp_score>
      <Hsp_evalue>9.63605e-25</Hsp_evalue>
      <Hsp_query-from>1711</Hsp_query-from>
      <Hsp_query-to>2070</Hsp_query-to>
      <Hsp_hit-from>578</Hsp_hit-from>
      <Hsp_hit-to>702</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>56</Hsp_identity>
      <Hsp_positive>74</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>125</Hsp_align-len>
      <Hsp_qseq>VPYPLKKQNGKTI--YECNICGKTFGQLSNLKVHLRIHSGERPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFSSTSNLKTHLRLHSGEKPFQCKL--CPAKFTQFIHLKLHR-RLH</Hsp_qseq>
      <Hsp_hseq>VEKPKGTQNTRAVKKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQNRFH</Hsp_hseq>
      <Hsp_midline>V  P   QN + +  +EC  C + F Q ++L+VH+R H G +PF C  CGK FTQ  +L+ H  +HTGEKPY C +C ++FS   NL  HL  H   KPF CKL  C   FTQ  ++K H+ R H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>86.6557</Hsp_bit-score>
      <Hsp_score>213</Hsp_score>
      <Hsp_evalue>1.66628e-17</Hsp_evalue>
      <Hsp_query-from>1837</Hsp_query-from>
      <Hsp_query-to>2154</Hsp_query-to>
      <Hsp_hit-from>594</Hsp_hit-from>
      <Hsp_hit-to>701</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>39</Hsp_identity>
      <Hsp_positive>61</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>108</Hsp_align-len>
      <Hsp_qseq>KCQTCGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFSSTSNLKTHLRLHSGEKPFQCKLCPAKFTQFIHLKLHRRLHARERPHRCA--DCQRSYIHQISLSLHLNGF</Hsp_qseq>
      <Hsp_hseq>ECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAHQNRF</Hsp_hseq>
      <Hsp_midline>+C  C + F+Q  HL+ H   H G KP+ C  C +RF+   NL+TH RLH+GEKP+ C +C  KF++  +L  H   H + +P  C   +C +++    ++  H N F</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>70.4774</Hsp_bit-score>
      <Hsp_score>171</Hsp_score>
      <Hsp_evalue>1.4291e-12</Hsp_evalue>
      <Hsp_query-from>1912</Hsp_query-from>
      <Hsp_query-to>2145</Hsp_query-to>
      <Hsp_hit-from>591</Hsp_hit-from>
      <Hsp_hit-to>668</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>47</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>78</Hsp_align-len>
      <Hsp_qseq>KPYQCQVCCRRFSSTSNLKTHLRLHSGEKPFQCKLCPAKFTQFIHLKLHRRLHARERPHRCADCQRSYIHQISLSLHL</Hsp_qseq>
      <Hsp_hseq>KKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHL</Hsp_hseq>
      <Hsp_midline>K ++C  C R FS  ++L+ H+R H G KPF C  C  +FTQ  +L+ H RLH  E+P+ C  C + +  + +L+ HL</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YNL027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:579580:581616:1 gene:YNL027W transcript:YNL027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRZ1 description:Transcription factor, activates transcription of stress response genes; nuclear localization is positively regulated by calcineurin-mediated dephosphorylation; rapidly localizes to the nucleus under blue light stress; can be activated in stochastic pulses of nuclear localization in response to calcium [Source:SGD;Acc:S000004972]</Hit_def>
  <Hit_accession>YNL027W</Hit_accession>
  <Hit_len>678</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>72.4034</Hsp_bit-score>
      <Hsp_score>176</Hsp_score>
      <Hsp_evalue>3.79872e-13</Hsp_evalue>
      <Hsp_query-from>1750</Hsp_query-from>
      <Hsp_query-to>1998</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>50</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>92</Hsp_align-len>
      <Hsp_qseq>YECNICGKTFGQLSNLKVHLRIHSGERPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQC---------QVCCRRFSSTSNLKTHLRLHSGEK</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline>+ C++CGK F +  NLK HLR H+ ERPF C  CGK F +    ++H  +HTG+K Y C           C ++F+ +  L  H +  SG +</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>56.225</Hsp_bit-score>
      <Hsp_score>134</Hsp_score>
      <Hsp_evalue>3.19879e-08</Hsp_evalue>
      <Hsp_query-from>1834</Hsp_query-from>
      <Hsp_query-to>2010</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>627</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>FKCQTCGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFSSTSNLKTHLRLHSGEKPFQC</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVC</Hsp_hseq>
      <Hsp_midline>F C  CGK FT+  +L+ H   HT E+P+ C +C + F+   + K H  LH+G+K + C</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>2.57798e-07</Hsp_evalue>
      <Hsp_query-from>1918</Hsp_query-from>
      <Hsp_query-to>2097</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>628</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>60</Hsp_align-len>
      <Hsp_qseq>YQCQVCCRRFSSTSNLKTHLRLHSGEKPFQCKLCPAKFTQFIHLKLHRRLHARERPHRCA</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCG</Hsp_hseq>
      <Hsp_midline>+ C VC ++F+   NLK+HLR H+ E+PF C +C   F +    K H  LH  ++ + C </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YGL209W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:95858:97006:1 gene:YGL209W transcript:YGL209W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG2 description:Zinc finger transcriptional repressor; cooperates with Mig1p in glucose-induced gene repression; under low glucose conditions relocalizes to mitochondrion, where it interacts with Ups1p, antagonizes mitochondrial fission factor Dnm1p, indicative of a role in mitochondrial fusion or regulating morphology; regulates filamentous growth in response to glucose depletion; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000003177]</Hit_def>
  <Hit_accession>YGL209W</Hit_accession>
  <Hit_len>382</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>63.5438</Hsp_bit-score>
      <Hsp_score>153</Hsp_score>
      <Hsp_evalue>9.53659e-11</Hsp_evalue>
      <Hsp_query-from>1813</Hsp_query-from>
      <Hsp_query-to>2043</Hsp_query-to>
      <Hsp_hit-from>10</Hsp_hit-from>
      <Hsp_hit-to>88</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>46</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>79</Hsp_align-len>
      <Hsp_qseq>IHSGERPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQCQV--CCRRFSSTSNLKTHLRLHSGEKPFQCKLCPAKFTQFI</Hsp_qseq>
      <Hsp_hseq>VDNENRPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQSQRRLKKASVQKQEFL</Hsp_hseq>
      <Hsp_midline>+ +  RPF+C TC +GF +L H ++H   HTGEKP+ C    C + FS +  LK H+R H+G+   + K    +  +F+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>3.45808e-06</Hsp_evalue>
      <Hsp_query-from>1717</Hsp_query-from>
      <Hsp_query-to>1911</Hsp_query-to>
      <Hsp_hit-from>8</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>67</Hsp_align-len>
      <Hsp_qseq>YPLKKQNGKTIYECNICGKTFGQLSNLKVHLRIHSGERPFKCQ--TCGKGFTQLAHLQKHHLVHTGE</Hsp_qseq>
      <Hsp_hseq>FPVDNENRP--FRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQ</Hsp_hseq>
      <Hsp_midline>+P+  +N    + C+ C + F +L + K HLR H+GE+P  C    CGK F++   L++H   HTG+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YER028C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:210692:211876:-1 gene:YER028C transcript:YER028C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG3 description:Transcriptional regulator; partially nonfunctional in S288C strains but has a major role in catabolite repression and ethanol response in some other strains; involved in response to toxic agents; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p, allowing induction of damage response genesenvironment [Source:SGD;Acc:S000000830]</Hit_def>
  <Hit_accession>YER028C</Hit_accession>
  <Hit_len>394</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>63.1586</Hsp_bit-score>
      <Hsp_score>152</Hsp_score>
      <Hsp_evalue>1.1627e-10</Hsp_evalue>
      <Hsp_query-from>1825</Hsp_query-from>
      <Hsp_query-to>1989</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>70</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>ERPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQCQV--CCRRFSSTSNLKTHLRLHS</Hsp_qseq>
      <Hsp_hseq>QRPFRCEICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHT</Hsp_hseq>
      <Hsp_midline>+RPF+C+ C +GF +L H ++H   HTGEKP++C V  C + FS +  LK HLR H+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>1.48238e-06</Hsp_evalue>
      <Hsp_query-from>1909</Hsp_query-from>
      <Hsp_query-to>2076</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>71</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>EKPYQCQVCCRRFSSTSNLKTHLRLHSGEKPFQCKL--CPAKFTQFIHLKLHRRLHAR</Hsp_qseq>
      <Hsp_hseq>QRPFRCEICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHTK</Hsp_hseq>
      <Hsp_midline>++P++C++C R F    + K H R H+GEKP +C +  CP  F++   LK H R H +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YKL062W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:323228:325120:1 gene:YKL062W transcript:YKL062W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN4 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes, inducing gene expression; involved in diauxic shift [Source:SGD;Acc:S000001545]</Hit_def>
  <Hit_accession>YKL062W</Hit_accession>
  <Hit_len>630</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>58.151</Hsp_bit-score>
      <Hsp_score>139</Hsp_score>
      <Hsp_evalue>8.12805e-09</Hsp_evalue>
      <Hsp_query-from>1816</Hsp_query-from>
      <Hsp_query-to>1986</Hsp_query-to>
      <Hsp_hit-from>567</Hsp_hit-from>
      <Hsp_hit-to>624</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>HSGERPFKCQTCGKGFTQLAHLQKH-HLVHTGEKPYQCQVCCRRFSSTSNLKTHLRLH</Hsp_qseq>
      <Hsp_hseq>YDKNKPFKCKDCEKAFRRSEHLKRHIRSVHSTERPFACMFCEKKFSRSDNLSQHLKTH</Hsp_hseq>
      <Hsp_midline>+   +PFKC+ C K F +  HL++H   VH+ E+P+ C  C ++FS + NL  HL+ H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>49.6766</Hsp_bit-score>
      <Hsp_score>117</Hsp_score>
      <Hsp_evalue>3.38316e-06</Hsp_evalue>
      <Hsp_query-from>1912</Hsp_query-from>
      <Hsp_query-to>2076</Hsp_query-to>
      <Hsp_hit-from>571</Hsp_hit-from>
      <Hsp_hit-to>626</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>56</Hsp_align-len>
      <Hsp_qseq>KPYQCQVCCRRFSSTSNLKTHLR-LHSGEKPFQCKLCPAKFTQFIHLKLHRRLHAR</Hsp_qseq>
      <Hsp_hseq>KPFKCKDCEKAFRRSEHLKRHIRSVHSTERPFACMFCEKKFSRSDNLSQHLKTHKK</Hsp_hseq>
      <Hsp_midline>KP++C+ C + F  + +LK H+R +HS E+PF C  C  KF++  +L  H + H +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YMR037C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:344403:346517:-1 gene:YMR037C transcript:YMR037C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN2 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; relative distribution to nucleus increases upon DNA replication stress [Source:SGD;Acc:S000004640]</Hit_def>
  <Hit_accession>YMR037C</Hit_accession>
  <Hit_len>704</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.9954</Hsp_bit-score>
      <Hsp_score>136</Hsp_score>
      <Hsp_evalue>1.67659e-08</Hsp_evalue>
      <Hsp_query-from>1825</Hsp_query-from>
      <Hsp_query-to>1986</Hsp_query-to>
      <Hsp_hit-from>644</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>ERPFKCQTCGKGFTQLAHLQKH-HLVHTGEKPYQCQVCCRRFSSTSNLKTHLRLH</Hsp_qseq>
      <Hsp_hseq>EKPFHCHICPKSFKRSEHLKRHVRSVHSNERPFACHICDKKFSRSDNLSQHIKTH</Hsp_hseq>
      <Hsp_midline>E+PF C  C K F +  HL++H   VH+ E+P+ C +C ++FS + NL  H++ H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>53.1434</Hsp_bit-score>
      <Hsp_score>126</Hsp_score>
      <Hsp_evalue>2.85337e-07</Hsp_evalue>
      <Hsp_query-from>1909</Hsp_query-from>
      <Hsp_query-to>2076</Hsp_query-to>
      <Hsp_hit-from>644</Hsp_hit-from>
      <Hsp_hit-to>700</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>36</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>EKPYQCQVCCRRFSSTSNLKTHLR-LHSGEKPFQCKLCPAKFTQFIHLKLHRRLHAR</Hsp_qseq>
      <Hsp_hseq>EKPFHCHICPKSFKRSEHLKRHVRSVHSNERPFACHICDKKFSRSDNLSQHIKTHKK</Hsp_hseq>
      <Hsp_midline>EKP+ C +C + F  + +LK H+R +HS E+PF C +C  KF++  +L  H + H +</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>49.2914</Hsp_bit-score>
      <Hsp_score>116</Hsp_score>
      <Hsp_evalue>4.60645e-06</Hsp_evalue>
      <Hsp_query-from>1750</Hsp_query-from>
      <Hsp_query-to>1902</Hsp_query-to>
      <Hsp_hit-from>647</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>YECNICGKTFGQLSNLKVHLR-IHSGERPFKCQTCGKGFTQLAHLQKHHLVH</Hsp_qseq>
      <Hsp_hseq>FHCHICPKSFKRSEHLKRHVRSVHSNERPFACHICDKKFSRSDNLSQHIKTH</Hsp_hseq>
      <Hsp_midline>+ C+IC K+F +  +LK H+R +HS ERPF C  C K F++  +L +H   H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YPR186C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:909733:911022:-1 gene:YPR186C transcript:YPR186C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PZF1 description:Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA [Source:SGD;Acc:S000006390]</Hit_def>
  <Hit_accession>YPR186C</Hit_accession>
  <Hit_len>429</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.225</Hsp_bit-score>
      <Hsp_score>134</Hsp_score>
      <Hsp_evalue>2.20552e-08</Hsp_evalue>
      <Hsp_query-from>1717</Hsp_query-from>
      <Hsp_query-to>2178</Hsp_query-to>
      <Hsp_hit-from>69</Hsp_hit-from>
      <Hsp_hit-to>226</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>47</Hsp_identity>
      <Hsp_positive>72</Hsp_positive>
      <Hsp_gaps>10</Hsp_gaps>
      <Hsp_align-len>161</Hsp_align-len>
      <Hsp_qseq>YPLKKQNGKTIYECNICGKTFGQLSNLKVHLRIHSGERPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQC--QVCCRRFSSTSNLKTHLRLHSGEKPFQCKLCPAKFTQFIHLKLHRRLH---ARERPHRC--ADCQRSYIHQISLSLHLNGFCPSQQGPA</Hsp_qseq>
      <Hsp_hseq>HQLSVHQGLRAFQCDKCAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHT--KSFICPEEGCNLRFYKHPQLRAHI-LSVHLHKLTCPHCNKSFQRPYRLRNHISKHHDPEVENPYQCTFAGCCKEFRIWSQLQSHIKNDHPKLKCPI</Hsp_hseq>
      <Hsp_midline>+ L    G   ++C+ C K+F + S+L+ HL  HS  +PF+C  CGKG T    L++H + HT  K + C  + C  RF     L+ H+ L        C  C   F +   L+ H   H     E P++C  A C + +     L  H+    P  + P </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YGL254W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:22304:23203:1 gene:YGL254W transcript:YGL254W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FZF1 description:Transcription factor involved in sulfite metabolism; sole identified regulatory target is SSU1; overexpression suppresses sulfite-sensitivity of many unrelated mutants due to hyperactivation of SSU1, contains five zinc fingers; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003223]</Hit_def>
  <Hit_accession>YGL254W</Hit_accession>
  <Hit_len>299</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>54.6842</Hsp_bit-score>
      <Hsp_score>130</Hsp_score>
      <Hsp_evalue>4.14088e-08</Hsp_evalue>
      <Hsp_query-from>1750</Hsp_query-from>
      <Hsp_query-to>1986</Hsp_query-to>
      <Hsp_hit-from>12</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>83</Hsp_align-len>
      <Hsp_qseq>YECNI--CGKTFGQLSNLKVHLRIHSGERPFKCQT--CGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFSSTSNLKTHLRLH</Hsp_qseq>
      <Hsp_hseq>YKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>Y+C+   C K + + S L+ H   H+ ++P+ C    CGK F +  HL+ H   H+  KP  C +C +RF +   L+ HL  H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>3.19632e-06</Hsp_evalue>
      <Hsp_query-from>1903</Hsp_query-from>
      <Hsp_query-to>2151</Hsp_query-to>
      <Hsp_hit-from>7</Hsp_hit-from>
      <Hsp_hit-to>93</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>45</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>87</Hsp_align-len>
      <Hsp_qseq>TGEKPYQCQV--CCRRFSSTSNLKTHLRLHSGEKPFQCKL--CPAKFTQFIHLKLHRRLHARERPHRCADCQRSYIHQISLSLHLNG</Hsp_qseq>
      <Hsp_hseq>TKSRNYKCSFDGCEKVYNRPSLLQQHQNSHTNQKPYHCDEPGCGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNS</Hsp_hseq>
      <Hsp_midline>T  + Y+C    C + ++  S L+ H   H+ +KP+ C    C  KF +  HL++H+  H++ +P  C  CQ+ ++    L  HLN </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YDR216W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:895035:899006:1 gene:YDR216W transcript:YDR216W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADR1 description:Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization [Source:SGD;Acc:S000002624]</Hit_def>
  <Hit_accession>YDR216W</Hit_accession>
  <Hit_len>1323</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.0694</Hsp_bit-score>
      <Hsp_score>131</Hsp_score>
      <Hsp_evalue>8.20288e-08</Hsp_evalue>
      <Hsp_query-from>1699</Hsp_query-from>
      <Hsp_query-to>1992</Hsp_query-to>
      <Hsp_hit-from>53</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>37</Hsp_identity>
      <Hsp_positive>55</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>105</Hsp_align-len>
      <Hsp_qseq>NGHTVPYPLKKQNGKTIY-ECNICGKTFGQLSNLKVHLRIH----SGE-RPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFSSTSNLKTHL-RLHSG</Hsp_qseq>
      <Hsp_hseq>NSNTFSVIQRTPDGKIITTNNNMNSKINKQLDKLPENLRLNGRTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>N +T     +  +GK I    N+  K   QL  L  +LR++    SG+ R F C+ C + F +  HL++H+  HT EKPY C +C R F+    L  H  ++HSG</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YGL035C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:431548:433062:-1 gene:YGL035C transcript:YGL035C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG1 description:Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state [Source:SGD;Acc:S000003003]</Hit_def>
  <Hit_accession>YGL035C</Hit_accession>
  <Hit_len>504</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.5286</Hsp_bit-score>
      <Hsp_score>127</Hsp_score>
      <Hsp_evalue>1.98292e-07</Hsp_evalue>
      <Hsp_query-from>1828</Hsp_query-from>
      <Hsp_query-to>2001</Hsp_query-to>
      <Hsp_hit-from>36</Hsp_hit-from>
      <Hsp_hit-to>95</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>60</Hsp_align-len>
      <Hsp_qseq>RPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQCQV--CCRRFSSTSNLKTHLRLHSGEKP</Hsp_qseq>
      <Hsp_hseq>RPHACPICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRIHTNSHP</Hsp_hseq>
      <Hsp_midline>RP  C  C + F +L H  +H  +HTGEKP+ C    C +RFS +  L  H R+H+   P</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YPR013C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:584632:585585:-1 gene:YPR013C transcript:YPR013C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CMR3 description:Putative zinc finger protein; YPR013C is not an essential gene [Source:SGD;Acc:S000006217]</Hit_def>
  <Hit_accession>YPR013C</Hit_accession>
  <Hit_len>317</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>3.58788e-07</Hsp_evalue>
      <Hsp_query-from>1735</Hsp_query-from>
      <Hsp_query-to>1986</Hsp_query-to>
      <Hsp_hit-from>221</Hsp_hit-from>
      <Hsp_hit-to>306</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>46</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>86</Hsp_align-len>
      <Hsp_qseq>NGKTIYECNICGKTFGQLSNLKVHLRIHSGERPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQC--QVCCRRFSSTSNLKTHLRLH</Hsp_qseq>
      <Hsp_hseq>NGRTKSEPGAVLNGSATFSDWKTDTRISSTKLRKQCPVCGKICSRPSTLKTHYLIHTGDTPFKCTWEGCTKSFNVKSNMLRHLKSH</Hsp_hseq>
      <Hsp_midline>NG+T  E           S+ K   RI S +   +C  CGK  ++ + L+ H+L+HTG+ P++C  + C + F+  SN+  HL+ H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YMR182C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:624532:625167:-1 gene:YMR182C transcript:YMR182C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RGM1 description:Putative zinc finger DNA binding transcription factor; contains two N-terminal C2H2 zinc fingers and C-terminal proline rich domain; overproduction impairs cell growth and induces expression of genes involved in monosaccharide catabolism and aldehyde metabolism; regulates expression of of Y&apos; telomeric elements and subtelomeric COS genes; relocalizes to the cytosol in response to hypoxia; RGM1 has a paralog, USV1, that arose from the whole genome duplication [Source:SGD;Acc:S000004794]</Hit_def>
  <Hit_accession>YMR182C</Hit_accession>
  <Hit_len>211</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>6.35759e-07</Hsp_evalue>
      <Hsp_query-from>1819</Hsp_query-from>
      <Hsp_query-to>1974</Hsp_query-to>
      <Hsp_hit-from>14</Hsp_hit-from>
      <Hsp_hit-to>68</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>SGERPFKC---QTCGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFSSTSNLKTH</Hsp_qseq>
      <Hsp_hseq>SVKRNYRCVGYPDCNMSFNRTEHLARHIRKHTGEKPFQCNICLKFFSRIDNLRQH</Hsp_hseq>
      <Hsp_midline>S +R ++C     C   F +  HL +H   HTGEKP+QC +C + FS   NL+ H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>1.52e-06</Hsp_evalue>
      <Hsp_query-from>1765</Hsp_query-from>
      <Hsp_query-to>2025</Hsp_query-to>
      <Hsp_hit-from>27</Hsp_hit-from>
      <Hsp_hit-to>114</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>47</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>88</Hsp_align-len>
      <Hsp_qseq>CGKTFGQLSNLKVHLRIHSGERPFKCQTCGKGFTQLAHLQKHH-LVHTGEKPYQCQVCCRRFSSTSNLKTHLRLHSGEKPFQCKLCPA</Hsp_qseq>
      <Hsp_hseq>CNMSFNRTEHLARHIRKHTGEKPFQCNICLKFFSRIDNLRQHQSSVHSDVDLMSLRRLQQSANSTANDPNATRMFPQLRPYGIVVQPA</Hsp_hseq>
      <Hsp_midline>C  +F +  +L  H+R H+GE+PF+C  C K F+++ +L++H   VH+       +   +  +ST+N     R+    +P+   + PA</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YPL230W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:115312:116487:1 gene:YPL230W transcript:YPL230W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:USV1 description:Putative transcription factor containing a C2H2 zinc finger; mutation affects transcriptional regulation of genes involved in growth on non-fermentable carbon sources, response to salt stress and cell wall biosynthesis; USV1 has a paralog, RGM1, that arose from the whole genome duplication [Source:SGD;Acc:S000006151]</Hit_def>
  <Hit_accession>YPL230W</Hit_accession>
  <Hit_len>391</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.447</Hsp_bit-score>
      <Hsp_score>119</Hsp_score>
      <Hsp_evalue>1.1943e-06</Hsp_evalue>
      <Hsp_query-from>1828</Hsp_query-from>
      <Hsp_query-to>1974</Hsp_query-to>
      <Hsp_hit-from>39</Hsp_hit-from>
      <Hsp_hit-to>90</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>RPFKC---QTCGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFSSTSNLKTH</Hsp_qseq>
      <Hsp_hseq>KTFKCTGYDGCTMSFTRAEHLARHIRKHTGEKPFQCPACLKFFSRVDNLKQH</Hsp_hseq>
      <Hsp_midline>+ FKC     C   FT+  HL +H   HTGEKP+QC  C + FS   NLK H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>6.72006e-06</Hsp_evalue>
      <Hsp_query-from>1933</Hsp_query-from>
      <Hsp_query-to>2109</Hsp_query-to>
      <Hsp_hit-from>49</Hsp_hit-from>
      <Hsp_hit-to>108</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>60</Hsp_align-len>
      <Hsp_qseq>CCRRFSSTSNLKTHLRLHSGEKPFQCKLCPAKFTQFIHLKLHRR-LHARERPHRCADCQR</Hsp_qseq>
      <Hsp_hseq>CTMSFTRAEHLARHIRKHTGEKPFQCPACLKFFSRVDNLKQHRESVHAHKNHHSTSSHQR</Hsp_hseq>
      <Hsp_midline>C   F+   +L  H+R H+GEKPFQC  C   F++  +LK HR  +HA +  H  +  QR</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YBR066C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:370037:370699:-1 gene:YBR066C transcript:YBR066C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRG2 description:Transcriptional repressor; mediates glucose repression and negatively regulates filamentous growth; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000000270]</Hit_def>
  <Hit_accession>YBR066C</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.521</Hsp_bit-score>
      <Hsp_score>114</Hsp_score>
      <Hsp_evalue>2.26577e-06</Hsp_evalue>
      <Hsp_query-from>1678</Hsp_query-from>
      <Hsp_query-to>1998</Hsp_query-to>
      <Hsp_hit-from>111</Hsp_hit-from>
      <Hsp_hit-to>209</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>37</Hsp_identity>
      <Hsp_positive>53</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>110</Hsp_align-len>
      <Hsp_qseq>AKGNLTVNGHTVPYPLKKQNGKTIYECNICGKTFGQLSNLKVHLRIHSGERPFK-CQTCGKGFTQLAHLQKHHLVHTGEKPYQC--QVCCRRFSSTSNLKTHLRLHSGEK</Hsp_qseq>
      <Hsp_hseq>VKAENTGNGKSDPYSSIKISKPT--------KTVIKLKSTKTNT---AGQRTRHFCKICSTGFTTSGHLSRHNRIHTGEKNHICPHEGCGQRFSRHDNCNQHYRTHANKK</Hsp_hseq>
      <Hsp_midline> K   T NG + PY   K +  T        KT  +L + K +    +G+R    C+ C  GFT   HL +H+ +HTGEK + C  + C +RFS   N   H R H+ +K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YDR043C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:542674:543369:-1 gene:YDR043C transcript:YDR043C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRG1 description:Transcriptional repressor; recruits the Cyc8p-Tup1p complex to promoters; mediates glucose repression and negatively regulates a variety of processes including filamentous growth and alkaline pH response; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000002450]</Hit_def>
  <Hit_accession>YDR043C</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>3.40668e-06</Hsp_evalue>
      <Hsp_query-from>1828</Hsp_query-from>
      <Hsp_query-to>1986</Hsp_query-to>
      <Hsp_hit-from>172</Hsp_hit-from>
      <Hsp_hit-to>226</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>RPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQC--QVCCRRFSSTSNLKTHLRLH</Hsp_qseq>
      <Hsp_hseq>RKYICKICARGFTTSGHLARHNRIHTGEKNHCCPYKGCTQRFSRHDNCLQHYRTH</Hsp_hseq>
      <Hsp_midline>R + C+ C +GFT   HL +H+ +HTGEK + C  + C +RFS   N   H R H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>17</Hit_num>
  <Hit_id>YJR127C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:658917:663059:-1 gene:YJR127C transcript:YJR127C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSF2 description:Zinc-finger protein; involved in transcriptional control of both nuclear and mitochondrial genes, many of which specify products required for glycerol-based growth, respiration, and other functions; RSF2 has a paralog, TDA9, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000003888]</Hit_def>
  <Hit_accession>YJR127C</Hit_accession>
  <Hit_len>1380</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>49.6766</Hsp_bit-score>
      <Hsp_score>117</Hsp_score>
      <Hsp_evalue>3.75347e-06</Hsp_evalue>
      <Hsp_query-from>1828</Hsp_query-from>
      <Hsp_query-to>1950</Hsp_query-to>
      <Hsp_hit-from>149</Hsp_hit-from>
      <Hsp_hit-to>189</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>26</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>41</Hsp_align-len>
      <Hsp_qseq>RPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFS</Hsp_qseq>
      <Hsp_hseq>RPFLCPTCTRGFVRQEHLKRHQHSHTREKPYLCIFCGRCFA</Hsp_hseq>
      <Hsp_midline>RPF C TC +GF +  HL++H   HT EKPY C  C R F+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>18</Hit_num>
  <Hit_id>YER130C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:421115:422446:-1 gene:YER130C transcript:YER130C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COM2 description:Transcription factor that binds IME1 Upstream Activation Signal (UAS)ru; COM2 transcription is regulated by Haa1p, Sok2p and Zap1p transcriptional activators; may bind the IME1 promoter under all growth conditions to negatively regulate its transcription in the absence of a positive regulator that binds more effectively; repressor activity may depend on phosphorylation by PKA; C. albicans homolog (MNL1) plays a role in adaptation to stress [Source:SGD;Acc:S000000932]</Hit_def>
  <Hit_accession>YER130C</Hit_accession>
  <Hit_len>443</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.521</Hsp_bit-score>
      <Hsp_score>114</Hsp_score>
      <Hsp_evalue>6.5291e-06</Hsp_evalue>
      <Hsp_query-from>1894</Hsp_query-from>
      <Hsp_query-to>2073</Hsp_query-to>
      <Hsp_hit-from>381</Hsp_hit-from>
      <Hsp_hit-to>441</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>61</Hsp_align-len>
      <Hsp_qseq>LVHTGEKPYQCQVCCRRFSSTSNLKTHLR-LHSGEKPFQCKLCPAKFTQFIHLKLHRRLHA</Hsp_qseq>
      <Hsp_hseq>LIPDASKQFGCEFCDRRFKRQEHLKRHVRSLHMCEKPFTCHICNKNFSRSDNLNQHVKTHA</Hsp_hseq>
      <Hsp_midline>L+    K + C+ C RRF    +LK H+R LH  EKPF C +C   F++  +L  H + HA</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>8.90348e-06</Hsp_evalue>
      <Hsp_query-from>1813</Hsp_query-from>
      <Hsp_query-to>1992</Hsp_query-to>
      <Hsp_hit-from>382</Hsp_hit-from>
      <Hsp_hit-to>442</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>20</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>61</Hsp_align-len>
      <Hsp_qseq>IHSGERPFKCQTCGKGFTQLAHLQKH-HLVHTGEKPYQCQVCCRRFSSTSNLKTHLRLHSG</Hsp_qseq>
      <Hsp_hseq>IPDASKQFGCEFCDRRFKRQEHLKRHVRSLHMCEKPFTCHICNKNFSRSDNLNQHVKTHAS</Hsp_hseq>
      <Hsp_midline>I    + F C+ C + F +  HL++H   +H  EKP+ C +C + FS + NL  H++ H+ </Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>19</Hit_num>
  <Hit_id>YML081W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:104777:108532:1 gene:YML081W transcript:YML081W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDA9 description:Transcription factor that regulates acetate production; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene; TDA9 has a paralog, RSF2, that arose from the whole genome duplication [Source:SGD;Acc:S000004546]</Hit_def>
  <Hit_accession>YML081W</Hit_accession>
  <Hit_len>1251</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.9062</Hsp_bit-score>
      <Hsp_score>115</Hsp_score>
      <Hsp_evalue>6.55414e-06</Hsp_evalue>
      <Hsp_query-from>1828</Hsp_query-from>
      <Hsp_query-to>1950</Hsp_query-to>
      <Hsp_hit-from>59</Hsp_hit-from>
      <Hsp_hit-to>99</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>19</Hsp_identity>
      <Hsp_positive>25</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>41</Hsp_align-len>
      <Hsp_qseq>RPFKCQTCGKGFTQLAHLQKHHLVHTGEKPYQCQVCCRRFS</Hsp_qseq>
      <Hsp_hseq>RPFLCHICTRGFVRQEHLKRHQRAHTNEKPFLCVFCGRCFA</Hsp_hseq>
      <Hsp_midline>RPF C  C +GF +  HL++H   HT EKP+ C  C R F+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>102</Statistics_hsp-len>
      <Statistics_eff-space>3043097386</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>14</Iteration_iter-num>
  <Iteration_query-ID>Query_14</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059998-RA transcript Note:&quot;Similar to ccnc Cyclin-C (Xenopus laevis)&quot; offset:732 AED:0.18 eAED:0.18 QI:732|1|1|1|0.09|0.08|12|962|193</Iteration_query-def>
  <Iteration_query-len>2276</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YNL025C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:584320:585291:-1 gene:YNL025C transcript:YNL025C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SSN8 description:Cyclin-like component of the RNA polymerase II holoenzyme; involved in phosphorylation of the RNA polymerase II C-terminal domain; forms a kinase-cyclin pair in the RNAPII holoenzyme with Ssn3p; required for both entry into and execution of the meiotic program; involved in glucose repression and telomere maintenance; cyclin homolog 35% identical to human cyclin C [Source:SGD;Acc:S000004970]</Hit_def>
  <Hit_accession>YNL025C</Hit_accession>
  <Hit_len>323</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>112.079</Hsp_bit-score>
      <Hsp_score>279</Hsp_score>
      <Hsp_evalue>1.89937e-27</Hsp_evalue>
      <Hsp_query-from>517</Hsp_query-from>
      <Hsp_query-to>1254</Hsp_query-to>
      <Hsp_hit-from>44</Hsp_hit-from>
      <Hsp_hit-to>306</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>85</Hsp_identity>
      <Hsp_positive>134</Hsp_positive>
      <Hsp_gaps>35</Hsp_gaps>
      <Hsp_align-len>272</Hsp_align-len>
      <Hsp_qseq>MDTGQTGHHEGATERLEEPH*RRILEDTYLL---CEF-IQALGEQLKLRQQVIATATVYFKRFYARYSLQCIDPVLMAPTCVFLASKVEEFGVISNSRLITAASTVFKNKFSYAFSKDFPFRVNHVLECEFYLLELMDCCLIVYHPYRALTQYVHDMG-PDEQL------LQIAWKIVNDTYRTDLCLMYPPFMIALASLHMACAIQQK---------------EPPKEHQKEVLRDGRHWFAELSVDMDKILEITRAILKLYEVWQSYDEK</Hsp_qseq>
      <Hsp_hseq>MDSKQNGIEQSITKNIPITHRDLHYDKDYNLRIYCYFLIMKLGRRLNIRQYALATAHIYLSRFLIKASVREINLYMLVTTCVYLACKVEECPQYIRT-LVSEARTL--------WPEFIPPDPTKVTEFEFYLLEELESYLIVHHPYQSLKQIVQVLKQPPFQITLSSDDLQNCWSLINDSYINDVHLLYPPHIIAVACLFITISIHGKPTKGSSLASAASEAIRDPKNSSSPVQIAFNRFMAESLVDLEEVMDTIQEQITLYDHWDKYHEQ</Hsp_hseq>
      <Hsp_midline>MD+ Q G  +  T+ +   H     +  Y L   C F I  LG +L +RQ  +ATA +Y  RF  + S++ I+  ++  TCV+LA KVEE      + L++ A T+        + +  P     V E EFYLLE ++  LIV+HPY++L Q V  +  P  Q+      LQ  W ++ND+Y  D+ L+YPP +IA+A L +  +I  K                 PK     V      + AE  VD++++++  +  + LY+ W  Y E+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YPR025C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:613377:614558:-1 gene:YPR025C transcript:YPR025C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CCL1 description:Cyclin associated with protein kinase Kin28p; Kin28p is the TFIIH-associated carboxy-terminal domain (CTD) kinase involved in transcription initiation at RNA polymerase II promoters; human homolog CCNH allows growth of yeast ccl1 temperature-sensitive mutant at restrictive temperature [Source:SGD;Acc:S000006229]</Hit_def>
  <Hit_accession>YPR025C</Hit_accession>
  <Hit_len>393</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>61.6178</Hsp_bit-score>
      <Hsp_score>148</Hsp_score>
      <Hsp_evalue>1.71125e-10</Hsp_evalue>
      <Hsp_query-from>619</Hsp_query-from>
      <Hsp_query-to>1083</Hsp_query-to>
      <Hsp_hit-from>124</Hsp_hit-from>
      <Hsp_hit-to>271</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>49</Hsp_identity>
      <Hsp_positive>74</Hsp_positive>
      <Hsp_gaps>33</Hsp_gaps>
      <Hsp_align-len>168</Hsp_align-len>
      <Hsp_qseq>IQALGEQLKLRQQVIATATVYFKRFYARYSLQCIDPVLMAPTCVFLASKVEEFGVISNSRLITAASTVFKNKFSYAFSKDFPFRVNHVLECEFYLLELMDCCLIVYHPYRALTQYVHD-------------MGPDEQLLQIAWKIVNDTYRTDLCLMYPPFMIALASL</Hsp_qseq>
      <Hsp_hseq>VQVIAQHLNLPTEVVATAISFFRRFFLENSVMQIDPKSIVHTTIFLACKSENYFISVDSFAQKAKST-----------------RDSVLKFEFKLLESLKFSLLNHHPYKPLHGFFLDIQNVLYGKVDLNYMG---QIYDRCKKRITAALLTDVVYFYTPPQITLATL</Hsp_hseq>
      <Hsp_midline>+Q + + L L  +V+ATA  +F+RF+   S+  IDP  +  T +FLA K E + +  +S    A ST                  + VL+ EF LLE +   L+ +HPY+ L  +  D             MG   Q+     K +     TD+   Y P  I LA+L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>97</Statistics_hsp-len>
      <Statistics_eff-space>1503026087</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>15</Iteration_iter-num>
  <Iteration_query-ID>Query_15</Iteration_query-ID>
  <Iteration_query-def>PMZ_0041172-RA transcript Note:&quot;Similar to PRDM1 PR domain zinc finger protein 1 (Homo sapiens)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0.2|0|6|923|456</Iteration_query-def>
  <Iteration_query-len>2294</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>97</Statistics_hsp-len>
      <Statistics_eff-space>1516669289</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>16</Iteration_iter-num>
  <Iteration_query-ID>Query_16</Iteration_query-ID>
  <Iteration_query-def>PMZ_0033954-RA transcript Note:&quot;Similar to PRDM1 PR domain zinc finger protein 1 (Homo sapiens)&quot; offset:0 AED:1.00 eAED:1.00 QI:0|0|0|0|0.5|0.66|3|0|132</Iteration_query-def>
  <Iteration_query-len>399</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>80</Statistics_hsp-len>
      <Statistics_eff-space>126461551</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>17</Iteration_iter-num>
  <Iteration_query-ID>Query_17</Iteration_query-ID>
  <Iteration_query-def>PMZ_0026338-RA transcript Note:&quot;Similar to Wdr34 WD repeat-containing protein 34 (Mus musculus)&quot; offset:187 AED:0.41 eAED:0.41 QI:187|0.33|0.25|1|0|0.25|4|0|307</Iteration_query-def>
  <Iteration_query-len>1111</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>645457293</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>18</Iteration_iter-num>
  <Iteration_query-ID>Query_18</Iteration_query-ID>
  <Iteration_query-def>PMZ_0048080-RA transcript Note:&quot;Similar to PRDM9 Histone-lysine N-methyltransferase PRDM9 (Homo sapiens)&quot; offset:291 AED:1.00 eAED:1.00 QI:291|0|0|0|0|0|5|477|361</Iteration_query-def>
  <Iteration_query-len>1854</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YJL056C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:330431:333073:-1 gene:YJL056C transcript:YJL056C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZAP1 description:Zinc-regulated transcription factor; binds to zinc-responsive promoters to induce transcription of certain genes in presence of zinc, represses other genes in low zinc; regulates its own transcription; contains seven zinc-finger domains [Source:SGD;Acc:S000003592]</Hit_def>
  <Hit_accession>YJL056C</Hit_accession>
  <Hit_len>880</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>101.679</Hsp_bit-score>
      <Hsp_score>252</Hsp_score>
      <Hsp_evalue>6.469e-23</Hsp_evalue>
      <Hsp_query-from>841</Hsp_query-from>
      <Hsp_query-to>1308</Hsp_query-to>
      <Hsp_hit-from>712</Hsp_hit-from>
      <Hsp_hit-to>870</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>59</Hsp_identity>
      <Hsp_positive>80</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>161</Hsp_align-len>
      <Hsp_qseq>CGKGFSHLSYLK-----VHYRTHTGEKPLICKVCGKGFSQHCSLRRHSRIHTGEKPYKCKDCGKEFRELYNLKIHSVIHTGGNPHECRVCGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRHSV</Hsp_qseq>
      <Hsp_hseq>CNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSFDDLGKLNSQKV</Hsp_hseq>
      <Hsp_midline>C K FS    L      VH      E   +   C + F Q   L RH ++H+  KPYKCK C + F     L  H+  H+G  P++C +C + F     LK H RTHTGEKP  CK+C +RF++  +L +H +TH  +K + C DC K F     L    V</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>101.293</Hsp_bit-score>
      <Hsp_score>251</Hsp_score>
      <Hsp_evalue>8.78781e-23</Hsp_evalue>
      <Hsp_query-from>910</Hsp_query-from>
      <Hsp_query-to>1314</Hsp_query-to>
      <Hsp_hit-from>705</Hsp_hit-from>
      <Hsp_hit-to>846</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>58</Hsp_identity>
      <Hsp_positive>82</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>142</Hsp_align-len>
      <Hsp_qseq>LICKV--CGKGFSQHCSLRRH-SRIHT--GEKPYKC--KDCGKEFRELYNLKIHSVIHTGGNPHECRVCGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRHSVMH</Hsp_qseq>
      <Hsp_hseq>VICQWDGCNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH</Hsp_hseq>
      <Hsp_midline>+IC+   C K FS    L  H   +H   G+  Y+C   DC + F +   L  H  +H+   P++C+ C R F+    L  H+RTH+GEKP+ C +C ++F+   SLK H RTHTGEKP  CK CGK F++SS+L +H   H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>88.9669</Hsp_bit-score>
      <Hsp_score>219</Hsp_score>
      <Hsp_evalue>7.60361e-19</Hsp_evalue>
      <Hsp_query-from>829</Hsp_query-from>
      <Hsp_query-to>1191</Hsp_query-to>
      <Hsp_hit-from>741</Hsp_hit-from>
      <Hsp_hit-to>859</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>47</Hsp_identity>
      <Hsp_positive>66</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>121</Hsp_align-len>
      <Hsp_qseq>LCNICGKGFSHLSYLKVHYRTHTGEKPLICKVCGKGFSQHCSLRRHSRIHTGEKPYKCKDCGKEFRELYNLKIHSVIHTGGNPHECRVCGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRF</Hsp_qseq>
      <Hsp_hseq>LWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGEKPLQCKICGKRFNESSNLSKHIKTH--QKKYKCSDCSKSF</Hsp_hseq>
      <Hsp_midline>L + C + F     L  H + H+  KP  CK C + FS   +L +H+R H+GEKPYKC  C K+F    +LKIH   HTG  P +C++CG+ F     L  H +TH  +K + C  C + F</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>71.2478</Hsp_bit-score>
      <Hsp_score>173</Hsp_score>
      <Hsp_evalue>2.48279e-13</Hsp_evalue>
      <Hsp_query-from>1009</Hsp_query-from>
      <Hsp_query-to>1323</Hsp_query-to>
      <Hsp_hit-from>712</Hsp_hit-from>
      <Hsp_hit-to>821</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>44</Hsp_identity>
      <Hsp_positive>59</Hsp_positive>
      <Hsp_gaps>5</Hsp_gaps>
      <Hsp_align-len>110</Hsp_align-len>
      <Hsp_qseq>CGKEFRELYNLKIH-SVIHT--GGNPHECRV--CGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRHSVMHTAD</Hsp_qseq>
      <Hsp_hseq>CNKSFSSAQELNDHLEAVHLTRGKSEYQCLWHDCHRTFPQRQKLIRHLKVHSKYKPYKCKTCKRCFSSEETLVQHTRTHSGEKPYKCHICNKKFAISSSLKIHIRTHTGE</Hsp_hseq>
      <Hsp_midline>C K F     L  H   +H   G + ++C    C R F  R  L  H + H+  KP+ CK C+R FS + +L +H RTH+GEKP+ C  C K F+ SSSLK H   HT +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YOR113W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:534075:536819:1 gene:YOR113W transcript:YOR113W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:AZF1 description:Zinc-finger transcription factor; involved in diauxic shift; in the presence of glucose, activates transcription of genes involved in growth and carbon metabolism; in nonfermentable carbon sources, activates transcription of genes involved in maintenance of cell wall integrity; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005639]</Hit_def>
  <Hit_accession>YOR113W</Hit_accession>
  <Hit_len>914</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>95.5153</Hsp_bit-score>
      <Hsp_score>236</Hsp_score>
      <Hsp_evalue>6.99442e-21</Hsp_evalue>
      <Hsp_query-from>826</Hsp_query-from>
      <Hsp_query-to>1134</Hsp_query-to>
      <Hsp_hit-from>593</Hsp_hit-from>
      <Hsp_hit-to>697</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>46</Hsp_identity>
      <Hsp_positive>61</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>105</Hsp_align-len>
      <Hsp_qseq>HLCNICGKGFSHLSYLKVHYRTHTGEKPLICKVCGKGFSQHCSLRRHSRIHTGEKPYKCKDCGKEFRELYNLKIHSVIHTGGNPHECRV--CGRVFTHRVYLKSH</Hsp_qseq>
      <Hsp_hseq>HECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAH</Hsp_hseq>
      <Hsp_midline>H C  C + FS  ++L+VH R+H G KP +C  CGK F+Q  +LR H R+HTGEKPY C  C K+F    NL  H V H    P  C++  C + FT    +K+H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>83.5741</Hsp_bit-score>
      <Hsp_score>205</Hsp_score>
      <Hsp_evalue>3.29563e-17</Hsp_evalue>
      <Hsp_query-from>988</Hsp_query-from>
      <Hsp_query-to>1302</Hsp_query-to>
      <Hsp_hit-from>591</Hsp_hit-from>
      <Hsp_hit-to>697</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>42</Hsp_identity>
      <Hsp_positive>64</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>107</Hsp_align-len>
      <Hsp_qseq>KPYKCKDCGKEFRELYNLKIHSVIHTGGNPHECRVCGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVCK--DCGKGFSQSSSLKRH</Hsp_qseq>
      <Hsp_hseq>KKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAH</Hsp_hseq>
      <Hsp_midline>K ++C  C + F +  +L++H   H G  P  C  CG+ FT    L++H R HTGEKP+ C +C+++FS++ +L  H  TH   KP VCK  +C K F+Q  ++K H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>80.8777</Hsp_bit-score>
      <Hsp_score>198</Hsp_score>
      <Hsp_evalue>2.81639e-16</Hsp_evalue>
      <Hsp_query-from>916</Hsp_query-from>
      <Hsp_query-to>1218</Hsp_query-to>
      <Hsp_hit-from>595</Hsp_hit-from>
      <Hsp_hit-to>697</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>41</Hsp_identity>
      <Hsp_positive>57</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>103</Hsp_align-len>
      <Hsp_qseq>CKVCGKGFSQHCSLRRHSRIHTGEKPYKCKDCGKEFRELYNLKIHSVIHTGGNPHECRVCGRVFTHRVYLKSHSRTHTGEKPHVCKV--CERRFSQQFSLKRH</Hsp_qseq>
      <Hsp_hseq>CPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAH</Hsp_hseq>
      <Hsp_midline>C  C + FSQ   L  H R H G KP+ C  CGK F +  NL+ H  +HTG  P+ C +C + F+ +  L +H  TH   KP VCK+  C + F+Q  ++K H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>80.1073</Hsp_bit-score>
      <Hsp_score>196</Hsp_score>
      <Hsp_evalue>4.64965e-16</Hsp_evalue>
      <Hsp_query-from>1078</Hsp_query-from>
      <Hsp_query-to>1314</Hsp_query-to>
      <Hsp_hit-from>593</Hsp_hit-from>
      <Hsp_hit-to>671</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>37</Hsp_identity>
      <Hsp_positive>49</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>79</Hsp_align-len>
      <Hsp_qseq>HECRVCGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRHSVMH</Hsp_qseq>
      <Hsp_hseq>HECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTH</Hsp_hseq>
      <Hsp_midline>HEC  C R+F+   +L+ H R+H G KP VC  C +RF+Q  +L+ H R HTGEKP+ C  C K FS+  +L  H V H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>5</Hsp_num>
      <Hsp_bit-score>72.0182</Hsp_bit-score>
      <Hsp_score>175</Hsp_score>
      <Hsp_evalue>1.67072e-13</Hsp_evalue>
      <Hsp_query-from>814</Hsp_query-from>
      <Hsp_query-to>1050</Hsp_query-to>
      <Hsp_hit-from>616</Hsp_hit-from>
      <Hsp_hit-to>697</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>36</Hsp_identity>
      <Hsp_positive>48</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>82</Hsp_align-len>
      <Hsp_qseq>VGY-PHLCNICGKGFSHLSYLKVHYRTHTGEKPLICKVCGKGFSQHCSLRRHSRIHTGEKPYKCK--DCGKEFRELYNLKIH</Hsp_qseq>
      <Hsp_hseq>IGYKPFVCDYCGKRFTQGGNLRTHERLHTGEKPYSCDICDKKFSRKGNLAAHLVTHQKLKPFVCKLENCNKTFTQLGNMKAH</Hsp_hseq>
      <Hsp_midline>+GY P +C+ CGK F+    L+ H R HTGEKP  C +C K FS+  +L  H   H   KP+ CK  +C K F +L N+K H</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>6</Hsp_num>
      <Hsp_bit-score>53.9138</Hsp_bit-score>
      <Hsp_score>128</Hsp_score>
      <Hsp_evalue>5.64349e-08</Hsp_evalue>
      <Hsp_query-from>1156</Hsp_query-from>
      <Hsp_query-to>1323</Hsp_query-to>
      <Hsp_hit-from>591</Hsp_hit-from>
      <Hsp_hit-to>646</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>56</Hsp_align-len>
      <Hsp_qseq>KPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRHSVMHTAD</Hsp_qseq>
      <Hsp_hseq>KKHECPYCHRLFSQATHLEVHVRSHIGYKPFVCDYCGKRFTQGGNLRTHERLHTGE</Hsp_hseq>
      <Hsp_midline>K H C  C R FSQ   L+ H R+H G KP VC  CGK F+Q  +L+ H  +HT +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YNL027W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:579580:581616:1 gene:YNL027W transcript:YNL027W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CRZ1 description:Transcription factor, activates transcription of stress response genes; nuclear localization is positively regulated by calcineurin-mediated dephosphorylation; rapidly localizes to the nucleus under blue light stress; can be activated in stochastic pulses of nuclear localization in response to calcium [Source:SGD;Acc:S000004972]</Hit_def>
  <Hit_accession>YNL027W</Hit_accession>
  <Hit_len>678</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>80.1073</Hsp_bit-score>
      <Hsp_score>196</Hsp_score>
      <Hsp_evalue>4.09645e-16</Hsp_evalue>
      <Hsp_query-from>1042</Hsp_query-from>
      <Hsp_query-to>1302</Hsp_query-to>
      <Hsp_hit-from>555</Hsp_hit-from>
      <Hsp_hit-to>652</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>44</Hsp_identity>
      <Hsp_positive>58</Hsp_positive>
      <Hsp_gaps>11</Hsp_gaps>
      <Hsp_align-len>98</Hsp_align-len>
      <Hsp_qseq>KIHSVIHTGGNPHE--CRVCGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVC----KD-----CGKGFSQSSSLKRH</Hsp_qseq>
      <Hsp_hseq>KLDSVTNNRKNPANFACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRH</Hsp_hseq>
      <Hsp_midline>K+ SV +   NP    C VCG+ FT    LKSH RTHT E+P +C +C + F++Q   KRH   HTG+K +VC    KD     CGK F++S +L RH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>71.2478</Hsp_bit-score>
      <Hsp_score>173</Hsp_score>
      <Hsp_evalue>1.97539e-13</Hsp_evalue>
      <Hsp_query-from>832</Hsp_query-from>
      <Hsp_query-to>1023</Hsp_query-to>
      <Hsp_hit-from>571</Hsp_hit-from>
      <Hsp_hit-to>643</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>45</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>73</Hsp_align-len>
      <Hsp_qseq>CNICGKGFSHLSYLKVHYRTHTGEKPLICKVCGKGFSQHCSLRRHSRIHTGEKPYKC----KD-----CGKEF</Hsp_qseq>
      <Hsp_hseq>CDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKF</Hsp_hseq>
      <Hsp_midline>C++CGK F+    LK H RTHT E+P IC +CGK F++    +RH  +HTG+K Y C    KD     CGK+F</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>62.003</Hsp_bit-score>
      <Hsp_score>149</Hsp_score>
      <Hsp_evalue>1.8739e-10</Hsp_evalue>
      <Hsp_query-from>994</Hsp_query-from>
      <Hsp_query-to>1242</Hsp_query-to>
      <Hsp_hit-from>569</Hsp_hit-from>
      <Hsp_hit-to>660</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>33</Hsp_identity>
      <Hsp_positive>50</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>92</Hsp_align-len>
      <Hsp_qseq>YKCKDCGKEFRELYNLKIHSVIHTGGNPHECRVCGRVFTHRVYLKSHSRTHTGEKPHVC--KV-------CERRFSQQFSLKRHYRTHTGEK</Hsp_qseq>
      <Hsp_hseq>FACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHTGKKRYVCGGKLKDGKPWGCGKKFARSDALGRHFKTESGRR</Hsp_hseq>
      <Hsp_midline>+ C  CGK+F   YNLK H   HT   P  C +CG+ F  +   K H   HTG+K +VC  K+       C ++F++  +L RH++T +G +</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>58.9214</Hsp_bit-score>
      <Hsp_score>141</Hsp_score>
      <Hsp_evalue>1.70445e-09</Hsp_evalue>
      <Hsp_query-from>1165</Hsp_query-from>
      <Hsp_query-to>1317</Hsp_query-to>
      <Hsp_hit-from>570</Hsp_hit-from>
      <Hsp_hit-to>620</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>51</Hsp_align-len>
      <Hsp_qseq>VCKVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRHSVMHT</Hsp_qseq>
      <Hsp_hseq>ACDVCGKKFTRPYNLKSHLRTHTNERPFICSICGKAFARQHDRKRHEDLHT</Hsp_hseq>
      <Hsp_midline> C VC ++F++ ++LK H RTHT E+P +C  CGK F++    KRH  +HT</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YGL209W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:95858:97006:1 gene:YGL209W transcript:YGL209W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG2 description:Zinc finger transcriptional repressor; cooperates with Mig1p in glucose-induced gene repression; under low glucose conditions relocalizes to mitochondrion, where it interacts with Ups1p, antagonizes mitochondrial fission factor Dnm1p, indicative of a role in mitochondrial fusion or regulating morphology; regulates filamentous growth in response to glucose depletion; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000003177]</Hit_def>
  <Hit_accession>YGL209W</Hit_accession>
  <Hit_len>382</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>58.9214</Hsp_bit-score>
      <Hsp_score>141</Hsp_score>
      <Hsp_evalue>8.51599e-10</Hsp_evalue>
      <Hsp_query-from>808</Hsp_query-from>
      <Hsp_query-to>1068</Hsp_query-to>
      <Hsp_hit-from>11</Hsp_hit-from>
      <Hsp_hit-to>99</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>34</Hsp_identity>
      <Hsp_positive>45</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>89</Hsp_align-len>
      <Hsp_qseq>DAVGYPHLCNICGKGFSHLSYLKVHYRTHTGEKPLICKV--CGKGFSQHCSLRRHSRIHTGEKPYKCKDCGKEFRELYNLKIHSVIHTG</Hsp_qseq>
      <Hsp_hseq>DNENRPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQSQRRLKKASVQKQEFLTVSGIPTIASG</Hsp_hseq>
      <Hsp_midline>D    P  C+ C +GF  L + K H RTHTGEKP  C    CGK FS+   L+RH R HTG+   + K    + +E   +     I +G</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>55.0694</Hsp_bit-score>
      <Hsp_score>131</Hsp_score>
      <Hsp_evalue>1.36021e-08</Hsp_evalue>
      <Hsp_query-from>1156</Hsp_query-from>
      <Hsp_query-to>1332</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>75</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>61</Hsp_align-len>
      <Hsp_qseq>KPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVC--KDCGKGFSQSSSLKRHSVMHTADDLR</Hsp_qseq>
      <Hsp_hseq>RPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQSQR</Hsp_hseq>
      <Hsp_midline>+P  C  C R F +    KRH RTHTGEKPH C    CGK FS+S  LKRH   HT    R</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>1.51366e-07</Hsp_evalue>
      <Hsp_query-from>1075</Hsp_query-from>
      <Hsp_query-to>1239</Hsp_query-to>
      <Hsp_hit-from>16</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>PHECRVCGRVFTHRVYLKSHSRTHTGEKPHVCKV--CERRFSQQFSLKRHYRTHTGE</Hsp_qseq>
      <Hsp_hseq>PFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQ</Hsp_hseq>
      <Hsp_midline>P  C  C R F    + K H RTHTGEKPH C    C + FS+   LKRH RTHTG+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>46.9802</Hsp_bit-score>
      <Hsp_score>110</Hsp_score>
      <Hsp_evalue>5.89541e-06</Hsp_evalue>
      <Hsp_query-from>988</Hsp_query-from>
      <Hsp_query-to>1236</Hsp_query-to>
      <Hsp_hit-from>15</Hsp_hit-from>
      <Hsp_hit-to>92</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>42</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>85</Hsp_align-len>
      <Hsp_qseq>KPYKCKDCGKEFRELYNLKIHSVIHTGGNPHECRV--CGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHYRTHTG</Hsp_qseq>
      <Hsp_hseq>RPFRCDTCHRGFHRLEHKKRHLRTHTGEKPHHCAFPGCGKSFSRSDELKRHMRTHTGQ-------SQRRLKKASVQKQEFLTVSG</Hsp_hseq>
      <Hsp_midline>+P++C  C + F  L + K H   HTG  PH C    CG+ F+    LK H RTHTG+        +RR  +    K+ + T +G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YDR253C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:963990:964565:-1 gene:YDR253C transcript:YDR253C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MET32 description:Zinc-finger DNA-binding transcription factor; involved in transcriptional regulation of the methionine biosynthetic genes; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; feedforward loop exists in the regulation of genes controlled by Met4p and Met32p; lack of such a loop for MET31 may account for the differential actions of Met32p and Met31p; MET32 has a paralog, MET31, that arose from the whole genome duplication [Source:SGD;Acc:S000002661]</Hit_def>
  <Hit_accession>YDR253C</Hit_accession>
  <Hit_len>191</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.4546</Hsp_bit-score>
      <Hsp_score>132</Hsp_score>
      <Hsp_evalue>2.34043e-09</Hsp_evalue>
      <Hsp_query-from>1138</Hsp_query-from>
      <Hsp_query-to>1302</Hsp_query-to>
      <Hsp_hit-from>90</Hsp_hit-from>
      <Hsp_hit-to>144</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>RTHTGEKPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRH</Hsp_qseq>
      <Hsp_hseq>RNSTGEKRFKCAKCSLEFSRSSDLRRHEKTHFAILPNICPQCGKGFARKDALKRH</Hsp_hseq>
      <Hsp_midline>R  TGEK   C  C   FS+   L+RH +TH    P++C  CGKGF++  +LKRH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YPL038W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:480535:481068:1 gene:YPL038W transcript:YPL038W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MET31 description:Zinc-finger DNA-binding transcription factor; targets strong transcriptional activator Met4p to promoters of sulfur metabolic genes; involved in transcriptional regulation of the methionine biosynthetic genes; feedforward loop controlling expression of MET32 and the lack of such a loop for MET31 may account for the differential actions of Met31p and Met32p; MET31 has a paralog, MET32, that arose from the whole genome duplication [Source:SGD;Acc:S000005959]</Hit_def>
  <Hit_accession>YPL038W</Hit_accession>
  <Hit_len>177</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.0694</Hsp_bit-score>
      <Hsp_score>131</Hsp_score>
      <Hsp_evalue>2.75927e-09</Hsp_evalue>
      <Hsp_query-from>1150</Hsp_query-from>
      <Hsp_query-to>1305</Hsp_query-to>
      <Hsp_hit-from>91</Hsp_hit-from>
      <Hsp_hit-to>142</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>GEKPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRHS</Hsp_qseq>
      <Hsp_hseq>GAQLYSCAKCQLKFSRSSDLRRHEKVHSLVLPHICSNCGKGFARKDALKRHS</Hsp_hseq>
      <Hsp_midline>G + + C  C+ +FS+   L+RH + H+   PH+C +CGKGF++  +LKRHS</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YPR186C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:909733:911022:-1 gene:YPR186C transcript:YPR186C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PZF1 description:Transcription factor IIIA (TFIIIA); essential DNA binding protein required for transcription of 5S rRNA by RNA polymerase III; not involved in transcription of other RNAP III genes; nine conserved zinc fingers; may also bind 5S rRNA [Source:SGD;Acc:S000006390]</Hit_def>
  <Hit_accession>YPR186C</Hit_accession>
  <Hit_len>429</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>57.3806</Hsp_bit-score>
      <Hsp_score>137</Hsp_score>
      <Hsp_evalue>3.36699e-09</Hsp_evalue>
      <Hsp_query-from>925</Hsp_query-from>
      <Hsp_query-to>1350</Hsp_query-to>
      <Hsp_hit-from>56</Hsp_hit-from>
      <Hsp_hit-to>195</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>44</Hsp_identity>
      <Hsp_positive>65</Hsp_positive>
      <Hsp_gaps>8</Hsp_gaps>
      <Hsp_align-len>145</Hsp_align-len>
      <Hsp_qseq>CGKGFSQHCSLRRHS-RIHTGEKPYKCKDCGKEFRELYNLKIHSVIHTGGNPHECRVCGRVFTHRVYLKSHSRTHTGEKPHVC--KVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRHSVMHTADDLRIWNEYE</Hsp_qseq>
      <Hsp_hseq>CDKAFTRPSILTEHQLSVHQGLRAFQCDKCAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHT--KSFICPEEGCNLRFYKHPQLRAHILSVHLHKL-TCPHCNKSFQRPYRLRNHISKH--HDPEVENPYQ</Hsp_hseq>
      <Hsp_midline>C K F++   L  H   +H G + ++C  C K F +  +L+ H   H+   P +C  CG+  T R  LK H  THT  K  +C  + C  RF +   L+ H  +    K   C  C K F +   L+ H   H   D  + N Y+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>56.6102</Hsp_bit-score>
      <Hsp_score>135</Hsp_score>
      <Hsp_evalue>5.79331e-09</Hsp_evalue>
      <Hsp_query-from>832</Hsp_query-from>
      <Hsp_query-to>1368</Hsp_query-to>
      <Hsp_hit-from>82</Hsp_hit-from>
      <Hsp_hit-to>295</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>56</Hsp_identity>
      <Hsp_positive>82</Hsp_positive>
      <Hsp_gaps>39</Hsp_gaps>
      <Hsp_align-len>216</Hsp_align-len>
      <Hsp_qseq>CNICGKGFSHLSYLKVHYRTHTGEKPLICKVCGKGFSQHCSLRRHSRIHTGE----------KPYK-----------------CKDCGKEFRELYNLKIHSVIHTGG---NPHECRVCGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHYRTH------TGEKPHVCKDCGKGFSQSSSLKRH-SVMHTADDLRIWNEYEKGIGQQ</Hsp_qseq>
      <Hsp_hseq>CDKCAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHTKSFICPEEGCNLRFYKHPQLRAHILSVHLHKLTCPHCNKSFQRPYRLRNHISKHHDPEVENPYQCTFAGCCKEFRIWSQLQSHIKNDHPKLKCPICSKPCVGENGLQMHMIIHDDSLVTKNWKCHICPDM--SFSRKHDLLTHYGSIHTEEDIPLELKYKISDIQQ</Hsp_hseq>
      <Hsp_midline>C+ C K F   S+L+ H  TH+  KP  C  CGKG +    L+RH   HT            + YK                 C  C K F+  Y L+ H   H      NP++C   G     R++ +  S          C +C +    +  L+ H   H         K H+C D    FS+   L  H   +HT +D+ +  +Y+    QQ</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>55.4546</Hsp_bit-score>
      <Hsp_score>132</Hsp_score>
      <Hsp_evalue>1.32985e-08</Hsp_evalue>
      <Hsp_query-from>841</Hsp_query-from>
      <Hsp_query-to>1302</Hsp_query-to>
      <Hsp_hit-from>56</Hsp_hit-from>
      <Hsp_hit-to>214</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>48</Hsp_identity>
      <Hsp_positive>63</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>160</Hsp_align-len>
      <Hsp_qseq>CGKGFSHLSYLKVH-YRTHTGEKPLICKVCGKGFSQHCSLRRHSRIHTGEKPYKCKDCGKEFRELYNLKIHSVIHTGGNPHECRVCGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHYRTHTG---EKPHVC--KDCGKGFSQSSSLKRH</Hsp_qseq>
      <Hsp_hseq>CDKAFTRPSILTEHQLSVHQGLRAFQCDKCAKSFVKKSHLERHLYTHSDTKPFQCSYCGKGVTTRQQLKRHEVTHTKSFICPEEGCNLRFYKHPQLRAHILSVHLHKL-TCPHCNKSFQRPYRLRNHISKHHDPEVENPYQCTFAGCCKEFRIWSQLQSH</Hsp_hseq>
      <Hsp_midline>C K F+  S L  H    H G +   C  C K F +   L RH   H+  KP++C  CGK       LK H V HT         C   F     L++H  +    K   C  C + F + + L+ H   H     E P+ C    C K F   S L+ H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YDR216W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:895035:899006:1 gene:YDR216W transcript:YDR216W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ADR1 description:Carbon source-responsive zinc-finger transcription factor; required for transcription of the glucose-repressed gene ADH2, of peroxisomal protein genes, and of genes required for ethanol, glycerol, and fatty acid utilization [Source:SGD;Acc:S000002624]</Hit_def>
  <Hit_accession>YDR216W</Hit_accession>
  <Hit_len>1323</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>57.7658</Hsp_bit-score>
      <Hsp_score>138</Hsp_score>
      <Hsp_evalue>4.35024e-09</Hsp_evalue>
      <Hsp_query-from>1123</Hsp_query-from>
      <Hsp_query-to>1305</Hsp_query-to>
      <Hsp_hit-from>90</Hsp_hit-from>
      <Hsp_hit-to>151</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>42</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>62</Hsp_align-len>
      <Hsp_qseq>LKSHSRTHTGE-KPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRHS</Hsp_qseq>
      <Hsp_hseq>LRLNGRTPSGKLRSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHA</Hsp_hseq>
      <Hsp_midline>L+ + RT +G+ +  VC+VC R F++Q  LKRHYR+HT EKP+ C  C + F++   L RH+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>9.68971e-07</Hsp_evalue>
      <Hsp_query-from>829</Hsp_query-from>
      <Hsp_query-to>984</Hsp_query-to>
      <Hsp_hit-from>105</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>22</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>53</Hsp_align-len>
      <Hsp_qseq>LCNICGKGFSHLSYLKVHYRTHTGEKPLICKVCGKGFSQHCSLRRHS-RIHTG</Hsp_qseq>
      <Hsp_hseq>VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>+C +C + F+   +LK HYR+HT EKP  C +C + F++   L RH+ +IH+G</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>4.38652e-06</Hsp_evalue>
      <Hsp_query-from>1084</Hsp_query-from>
      <Hsp_query-to>1236</Hsp_query-to>
      <Hsp_hit-from>106</Hsp_hit-from>
      <Hsp_hit-to>157</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>CRVCGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHY-RTHTG</Hsp_qseq>
      <Hsp_hseq>CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRCFTRRDLLIRHAQKIHSG</Hsp_hseq>
      <Hsp_midline>C VC R F  + +LK H R+HT EKP+ C +C R F+++  L RH  + H+G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YER028C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:210692:211876:-1 gene:YER028C transcript:YER028C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG3 description:Transcriptional regulator; partially nonfunctional in S288C strains but has a major role in catabolite repression and ethanol response in some other strains; involved in response to toxic agents; phosphorylation by Snf1p or the Mec1p pathway inactivates Mig3p, allowing induction of damage response genesenvironment [Source:SGD;Acc:S000000830]</Hit_def>
  <Hit_accession>YER028C</Hit_accession>
  <Hit_len>394</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.6102</Hsp_bit-score>
      <Hsp_score>135</Hsp_score>
      <Hsp_evalue>5.50626e-09</Hsp_evalue>
      <Hsp_query-from>1120</Hsp_query-from>
      <Hsp_query-to>1317</Hsp_query-to>
      <Hsp_hit-from>3</Hsp_hit-from>
      <Hsp_hit-to>70</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>31</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>68</Hsp_align-len>
      <Hsp_qseq>YLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVC--KDCGKGFSQSSSLKRHSVMHT</Hsp_qseq>
      <Hsp_hseq>YLRDRFPPDNDQRPFRCEICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHT</Hsp_hseq>
      <Hsp_midline>YL+        ++P  C++C R F +    KRH RTHTGEKPH C  + C K FS+S  LKRH   HT</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>56.6102</Hsp_bit-score>
      <Hsp_score>135</Hsp_score>
      <Hsp_evalue>5.90778e-09</Hsp_evalue>
      <Hsp_query-from>1075</Hsp_query-from>
      <Hsp_query-to>1233</Hsp_query-to>
      <Hsp_hit-from>16</Hsp_hit-from>
      <Hsp_hit-to>70</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>PHECRVCGRVFTHRVYLKSHSRTHTGEKPHVCKV--CERRFSQQFSLKRHYRTHT</Hsp_qseq>
      <Hsp_hseq>PFRCEICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHT</Hsp_hseq>
      <Hsp_midline>P  C +C R F    + K H RTHTGEKPH C V  C + FS+   LKRH RTHT</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>54.299</Hsp_bit-score>
      <Hsp_score>129</Hsp_score>
      <Hsp_evalue>3.16539e-08</Hsp_evalue>
      <Hsp_query-from>823</Hsp_query-from>
      <Hsp_query-to>981</Hsp_query-to>
      <Hsp_hit-from>16</Hsp_hit-from>
      <Hsp_hit-to>70</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>PHLCNICGKGFSHLSYLKVHYRTHTGEKPLICKV--CGKGFSQHCSLRRHSRIHT</Hsp_qseq>
      <Hsp_hseq>PFRCEICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHT</Hsp_hseq>
      <Hsp_midline>P  C IC +GF  L + K H RTHTGEKP  C V  C K FS+   L+RH R HT</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>4</Hsp_num>
      <Hsp_bit-score>53.5286</Hsp_bit-score>
      <Hsp_score>127</Hsp_score>
      <Hsp_evalue>4.90929e-08</Hsp_evalue>
      <Hsp_query-from>862</Hsp_query-from>
      <Hsp_query-to>1071</Hsp_query-to>
      <Hsp_hit-from>1</Hsp_hit-from>
      <Hsp_hit-to>72</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>40</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>72</Hsp_align-len>
      <Hsp_qseq>LSYLKVHYRTHTGEKPLICKVCGKGFSQHCSLRRHSRIHTGEKPYKC--KDCGKEFRELYNLKIHSVIHTGG</Hsp_qseq>
      <Hsp_hseq>MNYLRDRFPPDNDQRPFRCEICSRGFHRLEHKKRHGRTHTGEKPHKCTVQGCPKSFSRSDELKRHLRTHTKG</Hsp_hseq>
      <Hsp_midline>++YL+  +     ++P  C++C +GF +    +RH R HTGEKP+KC  + C K F     LK H   HT G</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YGL035C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:431548:433062:-1 gene:YGL035C transcript:YGL035C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MIG1 description:Transcription factor involved in glucose repression; sequence specific DNA binding protein containing two Cys2His2 zinc finger motifs; regulated by the SNF1 kinase and the GLC7 phosphatase; regulates filamentous growth along with Mig2p in response to glucose depletion; activated in stochastic pulses of nuclear localization, shuttling between cytosol and nucleus depending on external glucose levels and its phosphorylation state [Source:SGD;Acc:S000003003]</Hit_def>
  <Hit_accession>YGL035C</Hit_accession>
  <Hit_len>504</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.9138</Hsp_bit-score>
      <Hsp_score>128</Hsp_score>
      <Hsp_evalue>4.42709e-08</Hsp_evalue>
      <Hsp_query-from>1150</Hsp_query-from>
      <Hsp_query-to>1317</Hsp_query-to>
      <Hsp_hit-from>34</Hsp_hit-from>
      <Hsp_hit-to>91</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>27</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>GEKPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVC--KDCGKGFSQSSSLKRHSVMHT</Hsp_qseq>
      <Hsp_hseq>APRPHACPICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRIHT</Hsp_hseq>
      <Hsp_midline>  +PH C +C R F +     RH R HTGEKPH C    C K FS+S  L RH  +HT</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>53.9138</Hsp_bit-score>
      <Hsp_score>128</Hsp_score>
      <Hsp_evalue>5.04217e-08</Hsp_evalue>
      <Hsp_query-from>1075</Hsp_query-from>
      <Hsp_query-to>1245</Hsp_query-to>
      <Hsp_hit-from>37</Hsp_hit-from>
      <Hsp_hit-to>95</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>29</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>60</Hsp_align-len>
      <Hsp_qseq>PHECRVCGRVFTHRV-YLKSHSRTHTGEKPHVCKV--CERRFSQQFSLKRHYRTHTGEKP</Hsp_qseq>
      <Hsp_hseq>PHACPICHRAF-HRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRIHTNSHP</Hsp_hseq>
      <Hsp_midline>PH C +C R F HR+ +   H R HTGEKPH C    C +RFS+   L RH R HT   P</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>1.86684e-07</Hsp_evalue>
      <Hsp_query-from>823</Hsp_query-from>
      <Hsp_query-to>993</Hsp_query-to>
      <Hsp_hit-from>37</Hsp_hit-from>
      <Hsp_hit-to>95</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>59</Hsp_align-len>
      <Hsp_qseq>PHLCNICGKGFSHLSYLKVHYRTHTGEKPLICKV--CGKGFSQHCSLRRHSRIHTGEKP</Hsp_qseq>
      <Hsp_hseq>PHACPICHRAFHRLEHQTRHMRIHTGEKPHACDFPGCVKRFSRSDELTRHRRIHTNSHP</Hsp_hseq>
      <Hsp_midline>PH C IC + F  L +   H R HTGEKP  C    C K FS+   L RH RIHT   P</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YBR066C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:370037:370699:-1 gene:YBR066C transcript:YBR066C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRG2 description:Transcriptional repressor; mediates glucose repression and negatively regulates filamentous growth; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000000270]</Hit_def>
  <Hit_accession>YBR066C</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>2.14785e-07</Hsp_evalue>
      <Hsp_query-from>1030</Hsp_query-from>
      <Hsp_query-to>1350</Hsp_query-to>
      <Hsp_hit-from>105</Hsp_hit-from>
      <Hsp_hit-to>217</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>35</Hsp_identity>
      <Hsp_positive>51</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>113</Hsp_align-len>
      <Hsp_qseq>LYNLKIHSVIHTGG---NPHECRVCGRVFTHRVYLKSHSRTHTGEKP-HVCKVCERRFSQQFSLKRHYRTHTGEKPHVC--KDCGKGFSQSSSLKRHSVMHTADDLRIWNEYE</Hsp_qseq>
      <Hsp_hseq>LQNINIVKAENTGNGKSDPYSSIKISKPTKTVIKLKSTKTNTAGQRTRHFCKICSTGFTTSGHLSRHNRIHTGEKNHICPHEGCGQRFSRHDNCNQHYRTHANKKKRNWKRRE</Hsp_hseq>
      <Hsp_midline>L N+ I    +TG    +P+      +     + LKS      G++  H CK+C   F+    L RH R HTGEK H+C  + CG+ FS+  +  +H   H     R W   E</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>46.9802</Hsp_bit-score>
      <Hsp_score>110</Hsp_score>
      <Hsp_evalue>2.39351e-06</Hsp_evalue>
      <Hsp_query-from>826</Hsp_query-from>
      <Hsp_query-to>990</Hsp_query-to>
      <Hsp_hit-from>153</Hsp_hit-from>
      <Hsp_hit-to>209</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>57</Hsp_align-len>
      <Hsp_qseq>HLCNICGKGFSHLSYLKVHYRTHTGEKPLIC--KVCGKGFSQHCSLRRHSRIHTGEK</Hsp_qseq>
      <Hsp_hseq>HFCKICSTGFTTSGHLSRHNRIHTGEKNHICPHEGCGQRFSRHDNCNQHYRTHANKK</Hsp_hseq>
      <Hsp_midline>H C IC  GF+   +L  H R HTGEK  IC  + CG+ FS+H +  +H R H  +K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YML081W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:104777:108532:1 gene:YML081W transcript:YML081W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TDA9 description:Transcription factor that regulates acetate production; green fluorescent protein (GFP)-fusion protein localizes to the nucleus; null mutant is sensitive to expression of the top1-T722A allele; not an essential gene; TDA9 has a paralog, RSF2, that arose from the whole genome duplication [Source:SGD;Acc:S000004546]</Hit_def>
  <Hit_accession>YML081W</Hit_accession>
  <Hit_len>1251</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.9878</Hsp_bit-score>
      <Hsp_score>123</Hsp_score>
      <Hsp_evalue>2.85508e-07</Hsp_evalue>
      <Hsp_query-from>823</Hsp_query-from>
      <Hsp_query-to>984</Hsp_query-to>
      <Hsp_hit-from>60</Hsp_hit-from>
      <Hsp_hit-to>114</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>23</Hsp_identity>
      <Hsp_positive>34</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>55</Hsp_align-len>
      <Hsp_qseq>PHLCNICGKGFSHLSYLKVHYRTHTGEKPLICKVCGKGFSQHCSLRRHS-RIHTG</Hsp_qseq>
      <Hsp_hseq>PFLCHICTRGFVRQEHLKRHQRAHTNEKPFLCVFCGRCFARRDLVLRHQHKLHSA</Hsp_hseq>
      <Hsp_midline>P LC+IC +GF    +LK H R HT EKP +C  CG+ F++   + RH  ++H+ </Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>51.2174</Hsp_bit-score>
      <Hsp_score>121</Hsp_score>
      <Hsp_evalue>4.30155e-07</Hsp_evalue>
      <Hsp_query-from>1135</Hsp_query-from>
      <Hsp_query-to>1302</Hsp_query-to>
      <Hsp_hit-from>50</Hsp_hit-from>
      <Hsp_hit-to>107</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>35</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>58</Hsp_align-len>
      <Hsp_qseq>SRTHTGEKP--HVCKVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRH</Hsp_qseq>
      <Hsp_hseq>SRTIKTDKPRPFLCHICTRGFVRQEHLKRHQRAHTNEKPFLCVFCGRCFARRDLVLRH</Hsp_hseq>
      <Hsp_midline>SRT   +KP   +C +C R F +Q  LKRH R HT EKP +C  CG+ F++   + RH</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>5.52044e-06</Hsp_evalue>
      <Hsp_query-from>904</Hsp_query-from>
      <Hsp_query-to>1023</Hsp_query-to>
      <Hsp_hit-from>59</Hsp_hit-from>
      <Hsp_hit-to>98</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>18</Hsp_identity>
      <Hsp_positive>26</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>40</Hsp_align-len>
      <Hsp_qseq>KPLICKVCGKGFSQHCSLRRHSRIHTGEKPYKCKDCGKEF</Hsp_qseq>
      <Hsp_hseq>RPFLCHICTRGFVRQEHLKRHQRAHTNEKPFLCVFCGRCF</Hsp_hseq>
      <Hsp_midline>+P +C +C +GF +   L+RH R HT EKP+ C  CG+ F</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YGL254W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:22304:23203:1 gene:YGL254W transcript:YGL254W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FZF1 description:Transcription factor involved in sulfite metabolism; sole identified regulatory target is SSU1; overexpression suppresses sulfite-sensitivity of many unrelated mutants due to hyperactivation of SSU1, contains five zinc fingers; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000003223]</Hit_def>
  <Hit_accession>YGL254W</Hit_accession>
  <Hit_len>299</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>4.43431e-07</Hsp_evalue>
      <Hsp_query-from>925</Hsp_query-from>
      <Hsp_query-to>1230</Hsp_query-to>
      <Hsp_hit-from>19</Hsp_hit-from>
      <Hsp_hit-to>94</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>44</Hsp_positive>
      <Hsp_gaps>26</Hsp_gaps>
      <Hsp_align-len>102</Hsp_align-len>
      <Hsp_qseq>CGKGFSQHCSLRRHSRIHTGEKPYKCKDCGKEFRELYNLKIHSVIHTGGNPHECRVCGRVFTHRVYLKSHSRTHTGEKPHVCKVCERRFSQQFSLKRHYRTH</Hsp_qseq>
      <Hsp_hseq>CEKVYNRPSLLQQHQNSHTNQKPYHCDEPG--------------------------CGKKFIRPCHLRVHKWTHSQIKPKACTLCQKRFVTNQQLRRHLNSH</Hsp_hseq>
      <Hsp_midline>C K +++   L++H   HT +KPY C + G                          CG+ F    +L+ H  TH+  KP  C +C++RF     L+RH  +H</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YDR043C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IV:542674:543369:-1 gene:YDR043C transcript:YDR043C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:NRG1 description:Transcriptional repressor; recruits the Cyc8p-Tup1p complex to promoters; mediates glucose repression and negatively regulates a variety of processes including filamentous growth and alkaline pH response; activated in stochastic pulses of nuclear localization in response to low glucose [Source:SGD;Acc:S000002450]</Hit_def>
  <Hit_accession>YDR043C</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>48.1358</Hsp_bit-score>
      <Hsp_score>113</Hsp_score>
      <Hsp_evalue>1.04038e-06</Hsp_evalue>
      <Hsp_query-from>1084</Hsp_query-from>
      <Hsp_query-to>1230</Hsp_query-to>
      <Hsp_hit-from>176</Hsp_hit-from>
      <Hsp_hit-to>226</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>25</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>51</Hsp_align-len>
      <Hsp_qseq>CRVCGRVFTHRVYLKSHSRTHTGEKPHVC--KVCERRFSQQFSLKRHYRTH</Hsp_qseq>
      <Hsp_hseq>CKICARGFTTSGHLARHNRIHTGEKNHCCPYKGCTQRFSRHDNCLQHYRTH</Hsp_hseq>
      <Hsp_midline>C++C R FT   +L  H+R HTGEK H C  K C +RFS+  +  +HYRTH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YER130C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:421115:422446:-1 gene:YER130C transcript:YER130C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:COM2 description:Transcription factor that binds IME1 Upstream Activation Signal (UAS)ru; COM2 transcription is regulated by Haa1p, Sok2p and Zap1p transcriptional activators; may bind the IME1 promoter under all growth conditions to negatively regulate its transcription in the absence of a positive regulator that binds more effectively; repressor activity may depend on phosphorylation by PKA; C. albicans homolog (MNL1) plays a role in adaptation to stress [Source:SGD;Acc:S000000932]</Hit_def>
  <Hit_accession>YER130C</Hit_accession>
  <Hit_len>443</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>49.2914</Hsp_bit-score>
      <Hsp_score>116</Hsp_score>
      <Hsp_evalue>1.2935e-06</Hsp_evalue>
      <Hsp_query-from>1168</Hsp_query-from>
      <Hsp_query-to>1320</Hsp_query-to>
      <Hsp_hit-from>391</Hsp_hit-from>
      <Hsp_hit-to>442</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>32</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>52</Hsp_align-len>
      <Hsp_qseq>CKVCERRFSQQFSLKRHYRT-HTGEKPHVCKDCGKGFSQSSSLKRHSVMHTA</Hsp_qseq>
      <Hsp_hseq>CEFCDRRFKRQEHLKRHVRSLHMCEKPFTCHICNKNFSRSDNLNQHVKTHAS</Hsp_hseq>
      <Hsp_midline>C+ C+RRF +Q  LKRH R+ H  EKP  C  C K FS+S +L +H   H +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YMR182C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:624532:625167:-1 gene:YMR182C transcript:YMR182C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RGM1 description:Putative zinc finger DNA binding transcription factor; contains two N-terminal C2H2 zinc fingers and C-terminal proline rich domain; overproduction impairs cell growth and induces expression of genes involved in monosaccharide catabolism and aldehyde metabolism; regulates expression of of Y&apos; telomeric elements and subtelomeric COS genes; relocalizes to the cytosol in response to hypoxia; RGM1 has a paralog, USV1, that arose from the whole genome duplication [Source:SGD;Acc:S000004794]</Hit_def>
  <Hit_accession>YMR182C</Hit_accession>
  <Hit_len>211</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>47.3654</Hsp_bit-score>
      <Hsp_score>111</Hsp_score>
      <Hsp_evalue>1.91753e-06</Hsp_evalue>
      <Hsp_query-from>787</Hsp_query-from>
      <Hsp_query-to>981</Hsp_query-to>
      <Hsp_hit-from>12</Hsp_hit-from>
      <Hsp_hit-to>74</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>28</Hsp_identity>
      <Hsp_positive>38</Hsp_positive>
      <Hsp_gaps>6</Hsp_gaps>
      <Hsp_align-len>67</Hsp_align-len>
      <Hsp_qseq>NAKQER-WDAVGYPHLCNICGKGFSHLSYLKVHYRTHTGEKPLICKVCGKGFSQHCSLRRH-SRIHT</Hsp_qseq>
      <Hsp_hseq>NASVKRNYRCVGYPD----CNMSFNRTEHLARHIRKHTGEKPFQCNICLKFFSRIDNLRQHQSSVHS</Hsp_hseq>
      <Hsp_midline>NA  +R +  VGYP     C   F+   +L  H R HTGEKP  C +C K FS+  +LR+H S +H+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>17</Hit_num>
  <Hit_id>YJR127C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:658917:663059:-1 gene:YJR127C transcript:YJR127C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSF2 description:Zinc-finger protein; involved in transcriptional control of both nuclear and mitochondrial genes, many of which specify products required for glycerol-based growth, respiration, and other functions; RSF2 has a paralog, TDA9, that arose from the whole genome duplication; relocalizes from nucleus to cytoplasm upon DNA replication stress [Source:SGD;Acc:S000003888]</Hit_def>
  <Hit_accession>YJR127C</Hit_accession>
  <Hit_len>1380</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>5.01706e-06</Hsp_evalue>
      <Hsp_query-from>1156</Hsp_query-from>
      <Hsp_query-to>1302</Hsp_query-to>
      <Hsp_hit-from>149</Hsp_hit-from>
      <Hsp_hit-to>197</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>21</Hsp_identity>
      <Hsp_positive>31</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>49</Hsp_align-len>
      <Hsp_qseq>KPHVCKVCERRFSQQFSLKRHYRTHTGEKPHVCKDCGKGFSQSSSLKRH</Hsp_qseq>
      <Hsp_hseq>RPFLCPTCTRGFVRQEHLKRHQHSHTREKPYLCIFCGRCFARRDLVLRH</Hsp_hseq>
      <Hsp_midline>+P +C  C R F +Q  LKRH  +HT EKP++C  CG+ F++   + RH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>18</Hit_num>
  <Hit_id>YMR037C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:344403:346517:-1 gene:YMR037C transcript:YMR037C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:MSN2 description:Stress-responsive transcriptional activator; activated in stochastic pulses of nuclear localization in response to various stress conditions; binds DNA at stress response elements of responsive genes; relative distribution to nucleus increases upon DNA replication stress [Source:SGD;Acc:S000004640]</Hit_def>
  <Hit_accession>YMR037C</Hit_accession>
  <Hit_len>704</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>46.9802</Hsp_bit-score>
      <Hsp_score>110</Hsp_score>
      <Hsp_evalue>7.65607e-06</Hsp_evalue>
      <Hsp_query-from>1075</Hsp_query-from>
      <Hsp_query-to>1230</Hsp_query-to>
      <Hsp_hit-from>646</Hsp_hit-from>
      <Hsp_hit-to>698</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>19</Hsp_identity>
      <Hsp_positive>33</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>53</Hsp_align-len>
      <Hsp_qseq>PHECRVCGRVFTHRVYLKSHSRT-HTGEKPHVCKVCERRFSQQFSLKRHYRTH</Hsp_qseq>
      <Hsp_hseq>PFHCHICPKSFKRSEHLKRHVRSVHSNERPFACHICDKKFSRSDNLSQHIKTH</Hsp_hseq>
      <Hsp_midline>P  C +C + F    +LK H R+ H+ E+P  C +C+++FS+  +L +H +TH</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>95</Statistics_hsp-len>
      <Statistics_eff-space>1196136041</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>19</Iteration_iter-num>
  <Iteration_query-ID>Query_19</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059995-RA transcript Note:&quot;Similar to TIGD7 Tigger transposable element-derived protein 7 (Homo sapiens)&quot; offset:0 AED:0.13 eAED:0.13 QI:0|0|0|0.25|1|1|4|0|567</Iteration_query-def>
  <Iteration_query-len>1704</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>95</Statistics_hsp-len>
      <Statistics_eff-space>1081782691</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>20</Iteration_iter-num>
  <Iteration_query-ID>Query_20</Iteration_query-ID>
  <Iteration_query-def>PMZ_0059996-RA transcript Note:&quot;Similar to vim4 Vimentin-4 (Xenopus laevis)&quot; offset:0 AED:0.54 eAED:0.67 QI:0|0.28|0.12|0.87|1|1|8|0|367</Iteration_query-def>
  <Iteration_query-len>1104</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>640830359</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>

