<?xml version="1.0"?>
<!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
<BlastOutput>
  <BlastOutput_program>blastx</BlastOutput_program>
  <BlastOutput_version>BLASTX 2.10.0+</BlastOutput_version>
  <BlastOutput_reference>Stephen F. Altschul, Thomas L. Madden, Alejandro A. Sch&amp;auml;ffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), &quot;Gapped BLAST and PSI-BLAST: a new generation of protein database search programs&quot;, Nucleic Acids Res. 25:3389-3402.</BlastOutput_reference>
  <BlastOutput_db>/home/smr/dbs/ensembl/release-100/Saccharomyces_cerevisiae.R64-1-1.pep.all.fa</BlastOutput_db>
  <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
  <BlastOutput_query-def>PMZ_0029200-RA transcript Note:&quot;Similar to Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 (Mus musculus)&quot; offset:0 AED:0.50 eAED:0.50 QI:0|0.25|0.4|0.6|0.75|0.8|5|0|113</BlastOutput_query-def>
  <BlastOutput_query-len>342</BlastOutput_query-len>
  <BlastOutput_param>
    <Parameters>
      <Parameters_matrix>BLOSUM62</Parameters_matrix>
      <Parameters_expect>1e-05</Parameters_expect>
      <Parameters_gap-open>11</Parameters_gap-open>
      <Parameters_gap-extend>1</Parameters_gap-extend>
      <Parameters_filter>L;</Parameters_filter>
    </Parameters>
  </BlastOutput_param>
<BlastOutput_iterations>
<Iteration>
  <Iteration_iter-num>1</Iteration_iter-num>
  <Iteration_query-ID>Query_1</Iteration_query-ID>
  <Iteration_query-def>PMZ_0029200-RA transcript Note:&quot;Similar to Atp1b2 Sodium/potassium-transporting ATPase subunit beta-2 (Mus musculus)&quot; offset:0 AED:0.50 eAED:0.50 QI:0|0.25|0.4|0.6|0.75|0.8|5|0|113</Iteration_query-def>
  <Iteration_query-len>342</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>77</Statistics_hsp-len>
      <Statistics_eff-space>89017079</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>2</Iteration_iter-num>
  <Iteration_query-ID>Query_2</Iteration_query-ID>
  <Iteration_query-def>PMZ_0045269-RA transcript Note:&quot;Similar to RFC4 Replication factor C subunit 4 (Homo sapiens)&quot; offset:0 AED:0.46 eAED:0.72 QI:0|0|0|1|0|0.5|2|0|66</Iteration_query-def>
  <Iteration_query-len>201</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YJR068W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:X:567643:568704:1 gene:YJR068W transcript:YJR068W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RFC2 description:Subunit of heteropentameric Replication factor C (RF-C); RF-C is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon [Source:SGD;Acc:S000003829]</Hit_def>
  <Hit_accession>YJR068W</Hit_accession>
  <Hit_len>353</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>51.6026</Hsp_bit-score>
      <Hsp_score>122</Hsp_score>
      <Hsp_evalue>3.20648e-10</Hsp_evalue>
      <Hsp_query-from>91</Hsp_query-from>
      <Hsp_query-to>195</Hsp_query-to>
      <Hsp_hit-from>89</Hsp_hit-from>
      <Hsp_hit-to>123</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>24</Hsp_identity>
      <Hsp_positive>29</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>35</Hsp_align-len>
      <Hsp_qseq>RARVLELNASDERGIQVVRHKVKNFAQLTASSTRK</Hsp_qseq>
      <Hsp_hseq>KSRILELNASDERGISIVREKVKNFARLTVSKPSK</Hsp_hseq>
      <Hsp_midline>++R+LELNASDERGI +VR KVKNFA+LT S   K</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YOL094C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:141584:142555:-1 gene:YOL094C transcript:YOL094C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RFC4 description:Subunit of heteropentameric Replication factor C (RF-C); which is a DNA binding protein and ATPase that acts as a clamp loader of the proliferating cell nuclear antigen (PCNA) processivity factor for DNA polymerases delta and epsilon; relocalizes to the cytosol in response to hypoxia [Source:SGD;Acc:S000005454]</Hit_def>
  <Hit_accession>YOL094C</Hit_accession>
  <Hit_len>323</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>40.4318</Hsp_bit-score>
      <Hsp_score>93</Hsp_score>
      <Hsp_evalue>3.55757e-06</Hsp_evalue>
      <Hsp_query-from>100</Hsp_query-from>
      <Hsp_query-to>171</Hsp_query-to>
      <Hsp_hit-from>75</Hsp_hit-from>
      <Hsp_hit-to>98</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>18</Hsp_identity>
      <Hsp_positive>23</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>24</Hsp_align-len>
      <Hsp_qseq>VLELNASDERGIQVVRHKVKNFAQ</Hsp_qseq>
      <Hsp_hseq>VLELNASDDRGIDVVRNQIKHFAQ</Hsp_hseq>
      <Hsp_midline>VLELNASD+RGI VVR+++K+FAQ</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>40</Statistics_hsp-len>
      <Statistics_eff-space>71551809</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>3</Iteration_iter-num>
  <Iteration_query-ID>Query_3</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055766-RA transcript Note:&quot;Similar to RFC4 Replication factor C subunit 4 (Homo sapiens)&quot; offset:0 AED:0.22 eAED:0.22 QI:0|0|0.66|1|1|1|3|747|129</Iteration_query-def>
  <Iteration_query-len>1137</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>666278496</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>4</Iteration_iter-num>
  <Iteration_query-ID>Query_4</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055767-RA transcript Note:&quot;Similar to MSL2 E3 ubiquitin-protein ligase MSL2 (Homo sapiens)&quot; offset:0 AED:0.41 eAED:0.42 QI:0|0|0|0.66|1|1|3|0|662</Iteration_query-def>
  <Iteration_query-len>1989</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1293024789</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>5</Iteration_iter-num>
  <Iteration_query-ID>Query_5</Iteration_query-ID>
  <Iteration_query-def>PMZ_0027342-RA transcript Note:&quot;Similar to STAG2 Cohesin subunit SA-2 (Homo sapiens)&quot; offset:421 AED:0.27 eAED:0.27 QI:421|0.66|0.54|1|0.33|0.31|22|278|589</Iteration_query-def>
  <Iteration_query-len>2469</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>98</Statistics_hsp-len>
      <Statistics_eff-space>1643768575</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>6</Iteration_iter-num>
  <Iteration_query-ID>Query_6</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055769-RA transcript Note:&quot;Similar to TRIP12 E3 ubiquitin-protein ligase TRIP12 (Bos taurus)&quot; offset:0 AED:0.58 eAED:0.58 QI:0|0|0|0.7|1|1|10|0|347</Iteration_query-def>
  <Iteration_query-len>1044</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YKL010C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:421424:425875:-1 gene:YKL010C transcript:YKL010C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UFD4 description:Ubiquitin-protein ligase (E3); interacts with Rpt4p and Rpt6p, two subunits of the 19S particle of the 26S proteasome; cytoplasmic E3 involved in the degradation of ubiquitin fusion proteins; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000001493]</Hit_def>
  <Hit_accession>YKL010C</Hit_accession>
  <Hit_len>1483</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>68.1662</Hsp_bit-score>
      <Hsp_score>165</Hsp_score>
      <Hsp_evalue>5.64965e-13</Hsp_evalue>
      <Hsp_query-from>427</Hsp_query-from>
      <Hsp_query-to>681</Hsp_query-to>
      <Hsp_hit-from>250</Hsp_hit-from>
      <Hsp_hit-to>338</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>35</Hsp_identity>
      <Hsp_positive>52</Hsp_positive>
      <Hsp_gaps>4</Hsp_gaps>
      <Hsp_align-len>89</Hsp_align-len>
      <Hsp_qseq>VVPALISLLQMEHNFDMLQ----VIQCMDVAEQALTALEMLSRRHSKAVLQAGGLAASLLYLEFFSISAHRNALAIAANCCQSVTTDDF</Hsp_qseq>
      <Hsp_hseq>VCPESISIAVDEHVIPILQGKLVEISYIDLAEQVLETVEYISRVHGRDILKTGQLSIYVQFFDFLTIHAQRKAIAIVSNACSSIRTDDF</Hsp_hseq>
      <Hsp_midline>V P  IS+   EH   +LQ     I  +D+AEQ L  +E +SR H + +L+ G L+  + + +F +I A R A+AI +N C S+ TDDF</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>594561019</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>7</Iteration_iter-num>
  <Iteration_query-ID>Query_7</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055770-RA transcript Note:&quot;Similar to TRIP12 E3 ubiquitin-protein ligase TRIP12 (Homo sapiens)&quot; offset:646 AED:0.36 eAED:0.39 QI:646|0.76|0.83|1|0.41|0.44|18|0|807</Iteration_query-def>
  <Iteration_query-len>3070</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YKL010C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:421424:425875:-1 gene:YKL010C transcript:YKL010C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:UFD4 description:Ubiquitin-protein ligase (E3); interacts with Rpt4p and Rpt6p, two subunits of the 19S particle of the 26S proteasome; cytoplasmic E3 involved in the degradation of ubiquitin fusion proteins; relative distribution to the nucleus increases upon DNA replication stress [Source:SGD;Acc:S000001493]</Hit_def>
  <Hit_accession>YKL010C</Hit_accession>
  <Hit_len>1483</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>109.383</Hsp_bit-score>
      <Hsp_score>272</Hsp_score>
      <Hsp_evalue>1.33518e-24</Hsp_evalue>
      <Hsp_query-from>1685</Hsp_query-from>
      <Hsp_query-to>2239</Hsp_query-to>
      <Hsp_hit-from>1008</Hsp_hit-from>
      <Hsp_hit-to>1221</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>75</Hsp_identity>
      <Hsp_positive>105</Hsp_positive>
      <Hsp_gaps>45</Hsp_gaps>
      <Hsp_align-len>222</Hsp_align-len>
      <Hsp_qseq>AIPSSEFINSKLTAKANRQLQDPLVIMTGNIPAWLTELGKTCPFLFPFDTRQLLLYVTAFDRDRAMQRLLDT--------NPDISQADAQDSRVAPRLDRKKV--------------------------GTGLGPTLEFYALVSQELQRADLGMWRGDELTITSPKGASEGVRYVHSAQGFFPAPLG---RNTKATVLTRLKIKFRFLGRFMAKALMDSRMV</Hsp_qseq>
      <Hsp_hseq>GVKSDSFINSKLSAKLARQLDEPLVVASGALPDWSLFLTRRFPFLFPFDTRMLFLQCTSFGYGRLIQLWKNKSKGSKDLRNDEALQQLGRITRRKLRISRKTIFATGLKILSKYGSSPDVLEIEYQEEAGTGLGPTLEFYSVVSKYFARKSLNMWRCNSYSYRSEMDVDTTDDYITTL--LFPEPLNPFSNNEKVIEL------FGYLGTFVARSLLDNRIL</Hsp_hseq>
      <Hsp_midline> + S  FINSKL+AK  RQL +PLV+ +G +P W   L +  PFLFPFDTR L L  T+F   R +Q   +         N +  Q   + +R   R+ RK +                          GTGLGPTLEFY++VS+   R  L MWR +  +  S         Y+ +    FP PL     N K   L      F +LG F+A++L+D+R++</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>68.5514</Hsp_bit-score>
      <Hsp_score>166</Hsp_score>
      <Hsp_evalue>4.09559e-12</Hsp_evalue>
      <Hsp_query-from>2612</Hsp_query-from>
      <Hsp_query-to>3067</Hsp_query-to>
      <Hsp_hit-from>1258</Hsp_hit-from>
      <Hsp_hit-to>1483</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>61</Hsp_identity>
      <Hsp_positive>89</Hsp_positive>
      <Hsp_gaps>76</Hsp_gaps>
      <Hsp_align-len>227</Hsp_align-len>
      <Hsp_qseq>IDPVTRESLQSALEALTMSGCSIEDLSLDFTLPGFPHIELRRGGKDVPVTIHNLQQYLQ--LDQLF-----------------------------------CGSKAEIWDVKSLMECCRPDHGYTHDRWRPSPYYRLIT-----------------------------------LEAAED---PDGFLPSVMTCVNYLKLPDYSTCSLMRERLLTAAREGQRSFHLS</Hsp_qseq>
      <Hsp_hseq>VDPLLAKSLKYIV-ANKDDNMTLESLSLTFTVPGNDDIELIPGGCNKSLNSSNVEEYIHGVIDQILGKGIEKQLKAFIEGFSKVFSYERMLILFPDELVDIFGRVEEDWSMATLYTNLNAEHGYTMDSSIIHDFISIISAFGKHERRLFLQFLTGSPKLPIGGFKSLNPKFTVVLKHAEDGLTADEYLPSVMTCANYLKLPKYTSKDIMRSRLCQAIEEGAGAFLLS</Hsp_hseq>
      <Hsp_midline>+DP+  +SL+  + A      ++E LSL FT+PG   IEL  GG +  +   N+++Y+   +DQ+                                     G   E W + +L      +HGYT D      +  +I+                                   L+ AED    D +LPSVMTC NYLKLP Y++  +MR RL  A  EG  +F LS</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>2088856308</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>8</Iteration_iter-num>
  <Iteration_query-ID>Query_8</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055773-RA transcript Note:&quot;Similar to SENP5 Sentrin-specific protease 5 (Homo sapiens)&quot; offset:0 AED:0.33 eAED:0.39 QI:0|0.6|0.66|1|0.4|0.5|6|886|159</Iteration_query-def>
  <Iteration_query-len>1366</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>93</Statistics_hsp-len>
      <Statistics_eff-space>832696654</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>9</Iteration_iter-num>
  <Iteration_query-ID>Query_9</Iteration_query-ID>
  <Iteration_query-def>PMZ_0029202-RA transcript Note:&quot;Similar to TEX11 Testis-expressed protein 11 (Homo sapiens)&quot; offset:7 AED:1.00 eAED:1.00 QI:7|0|0|0|0.46|0.42|14|209|471</Iteration_query-def>
  <Iteration_query-len>1632</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>94</Statistics_hsp-len>
      <Statistics_eff-space>1032150150</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>10</Iteration_iter-num>
  <Iteration_query-ID>Query_10</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055776-RA transcript Note:&quot;Similar to Pcca Propionyl-CoA carboxylase alpha chain, mitochondrial (Rattus norvegicus)&quot; offset:131 AED:0.07 eAED:0.07 QI:131|0.73|0.93|1|0.2|0.18|16|3877|329</Iteration_query-def>
  <Iteration_query-len>4998</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YBR208C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:636703:642210:-1 gene:YBR208C transcript:YBR208C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:DUR1,2 description:Urea amidolyase; contains both urea carboxylase and allophanate hydrolase activities, degrades urea to CO2 and NH3; expression sensitive to nitrogen catabolite repression and induced by allophanate, an intermediate in allantoin degradation; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000000412]</Hit_def>
  <Hit_accession>YBR208C</Hit_accession>
  <Hit_len>1835</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>135.961</Hsp_bit-score>
      <Hsp_score>341</Hsp_score>
      <Hsp_evalue>3.02461e-32</Hsp_evalue>
      <Hsp_query-from>270</Hsp_query-from>
      <Hsp_query-to>779</Hsp_query-to>
      <Hsp_hit-from>633</Hsp_hit-from>
      <Hsp_hit-to>843</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>77</Hsp_identity>
      <Hsp_positive>116</Hsp_positive>
      <Hsp_gaps>43</Hsp_gaps>
      <Hsp_align-len>212</Hsp_align-len>
      <Hsp_qseq>FDKILIANRGEIACRVIKTCKKMGITTVAVHSDVDANAVHVKMADEAFCVGPAPTAQSYLNMAAILDAVKTSGAQAVHPGYGFLSENKEFAKQLAAEGVKFIGPDTHALQAMGDKIESKLIAKTAGVNTIPGFDGVVKNTKDAVKIAREI------------------------------------------DDRLLIEKFIDNPRHIEIQV</Hsp_qseq>
      <Hsp_hseq>FDTVLIANRGEIAVRIIKTLKKLGIRSVAVYSDPDKYSQHVTDADVSVPLHGTTAAQTYLDMNKIIDAAKQTNAQAIIPGYGFLSENADFSDACTSAGITFVGPSGDIIRGLGLKHSARQIAQKAGVPLVPG-SLLITSVEEAKKVAAELEYPVMVKSTAGGGGIGLQKVDSEEDIEHIFETVKHQGETFFGDAGVFLERFIENARHVEVQL</Hsp_hseq>
      <Hsp_midline>FD +LIANRGEIA R+IKT KK+GI +VAV+SD D  + HV  AD +  +     AQ+YL+M  I+DA K + AQA+ PGYGFLSEN +F+    + G+ F+GP    ++ +G K  ++ IA+ AGV  +PG   ++ + ++A K+A E+                                          D  + +E+FI+N RH+E+Q+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>67.3958</Hsp_bit-score>
      <Hsp_score>163</Hsp_score>
      <Hsp_evalue>2.03873e-11</Hsp_evalue>
      <Hsp_query-from>762</Hsp_query-from>
      <Hsp_query-to>1079</Hsp_query-to>
      <Hsp_hit-from>921</Hsp_hit-from>
      <Hsp_hit-to>1070</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>66</Hsp_positive>
      <Hsp_gaps>44</Hsp_gaps>
      <Hsp_align-len>150</Hsp_align-len>
      <Hsp_qseq>HIEIQVEHPITECITGLDLVMEMIRVAAGHRLRLSQSEVPIRGWAIECRVYAE--------------------------------------------LVTYGGDRKEALRRMVEALDSYVIRGVTHNIPLLREIITNQRFITGDISTKFL</Hsp_qseq>
      <Hsp_hseq>NTRLQVEHPITEMVTGLDLVEWMIRIAANDAPDFDSTKVEVNGVSMEARLYAENPLKNFRPSPGLLVDVKFPDWARVDTWVKKGTNISPEYDPTLAKIIVHGKDRDDAISKLNQALEETKVYGCITNIDYLKSIITSDFFAKAKVSTNIL</Hsp_hseq>
      <Hsp_midline>+  +QVEHPITE +TGLDLV  MIR+AA        ++V + G ++E R+YAE                                            ++ +G DR +A+ ++ +AL+   + G   NI  L+ IIT+  F    +ST  L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YBR218C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:II:658707:662249:-1 gene:YBR218C transcript:YBR218C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYC2 description:Pyruvate carboxylase isoform; cytoplasmic enzyme that converts pyruvate to oxaloacetate; differentially regulated than isoform Pyc1p; mutations in the human homolog are associated with lactic acidosis; PYC2 has a paralog, PYC1, that arose from the whole genome duplication [Source:SGD;Acc:S000000422]</Hit_def>
  <Hit_accession>YBR218C</Hit_accession>
  <Hit_len>1180</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>115.546</Hsp_bit-score>
      <Hsp_score>288</Hsp_score>
      <Hsp_evalue>3.97158e-26</Hsp_evalue>
      <Hsp_query-from>273</Hsp_query-from>
      <Hsp_query-to>779</Hsp_query-to>
      <Hsp_hit-from>21</Hsp_hit-from>
      <Hsp_hit-to>234</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>65</Hsp_identity>
      <Hsp_positive>107</Hsp_positive>
      <Hsp_gaps>47</Hsp_gaps>
      <Hsp_align-len>215</Hsp_align-len>
      <Hsp_qseq>DKILIANRGEIACRVIKTCKKMGITTVAVHSDVDANAVHVKMADEAFCVGP----APTAQSYLNMAAILDAVKTSGAQAVHPGYGFLSENKEFAKQLAAEGVKFIGPDTHALQAMGDKIESKLIAKTAGVNTIPGFDGVVKNTKDAVKIAREI-----------------------DD-------------------RLLIEKFIDNPRHIEIQV</Hsp_qseq>
      <Hsp_hseq>NKILVANRGEIPIRIFRSAHELSMRTIAIYSHEDRLSMHRLKADEAYVIGEEGQYTPVG-AYLAMDEIIEIAKKHKVDFIHPGYGFLSENSEFADKVVKAGITWIGPPAEVIDSVGDKVSARHLAARANVPTVPGTPGPIETVQEALDFVNEYGYPVIIKAAFGGGGRGMRVVREGDDVADAFQRATSEARTAFGNGTCFVERFLDKPKHIEVQL</Hsp_hseq>
      <Hsp_midline>+KIL+ANRGEI  R+ ++  ++ + T+A++S  D  ++H   ADEA+ +G      P   +YL M  I++  K      +HPGYGFLSEN EFA ++   G+ +IGP    + ++GDK+ ++ +A  A V T+PG  G ++  ++A+    E                        DD                      +E+F+D P+HIE+Q+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>68.1662</Hsp_bit-score>
      <Hsp_score>165</Hsp_score>
      <Hsp_evalue>9.99295e-12</Hsp_evalue>
      <Hsp_query-from>744</Hsp_query-from>
      <Hsp_query-to>1118</Hsp_query-to>
      <Hsp_hit-from>307</Hsp_hit-from>
      <Hsp_hit-to>478</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>58</Hsp_identity>
      <Hsp_positive>81</Hsp_positive>
      <Hsp_gaps>55</Hsp_gaps>
      <Hsp_align-len>176</Hsp_align-len>
      <Hsp_qseq>FID-NPRHIEIQVEHPITECITGLDLVMEMIRVAAGH---RLRLSQSEVPIRGWAIECRVYAE------------LVTY----------------------------------GGDRKEALRR-MVEALDSYVIRGVTHNIPLLREIITNQRFITGDISTKFLPEVYPEGFKVLVS</Hsp_qseq>
      <Hsp_hseq>FIEINPR---IQVEHTITEEITGIDIVSAQIQIAAGATLTQLGLLQDKITTRGFSIQCRITTEDPSKNFQPDTGRLEVYRSAGGNGVRLDGGNAYAGATISPHYDSMLVKCSCSGSTYEIVRRKMIRALIEFRIRGVKTNIPFLLTLLTNPVFIEGTYWTTFIDDT-PQLFQMVSS</Hsp_hseq>
      <Hsp_midline>FI+ NPR   IQVEH ITE ITG+D+V   I++AAG    +L L Q ++  RG++I+CR+  E            L  Y                                   G   E +RR M+ AL  + IRGV  NIP L  ++TN  FI G   T F+ +  P+ F+++ S</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YGL062W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:385196:388732:1 gene:YGL062W transcript:YGL062W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:PYC1 description:Pyruvate carboxylase isoform; cytoplasmic enzyme that converts pyruvate to oxaloacetate; differentially regulated than isoform Pyc2p; mutations in the human homolog are associated with lactic acidosis; PYC1 has a paralog, PYC2, that arose from the whole genome duplication [Source:SGD;Acc:S000003030]</Hit_def>
  <Hit_accession>YGL062W</Hit_accession>
  <Hit_len>1178</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>114.775</Hsp_bit-score>
      <Hsp_score>286</Hsp_score>
      <Hsp_evalue>5.80979e-26</Hsp_evalue>
      <Hsp_query-from>273</Hsp_query-from>
      <Hsp_query-to>779</Hsp_query-to>
      <Hsp_hit-from>20</Hsp_hit-from>
      <Hsp_hit-to>233</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>65</Hsp_identity>
      <Hsp_positive>105</Hsp_positive>
      <Hsp_gaps>45</Hsp_gaps>
      <Hsp_align-len>214</Hsp_align-len>
      <Hsp_qseq>DKILIANRGEIACRVIKTCKKMGITTVAVHSDVDANAVHVKMADEAFC---VGPAPTAQSYLNMAAILDAVKTSGAQAVHPGYGFLSENKEFAKQLAAEGVKFIGPDTHALQAMGDKIESKLIAKTAGVNTIPGFDGVVKNTKDAVKIAREI-----------------------DD-------------------RLLIEKFIDNPRHIEIQV</Hsp_qseq>
      <Hsp_hseq>NKILVANRGEIPIRIFRTAHELSMQTVAIYSHEDRLSTHKQKADEAYVIGEVGQYTPVGAYLAIDEIISIAQKHQVDFIHPGYGFLSENSEFADKVVKAGITWIGPPAEVIDSVGDKVSARNLAAKANVPTVPGTPGPIETVEEALDFVNEYGYPVIIKAAFGGGGRGMRVVREGDDVADAFQRATSEARTAFGNGTCFVERFLDKPKHIEVQL</Hsp_hseq>
      <Hsp_midline>+KIL+ANRGEI  R+ +T  ++ + TVA++S  D  + H + ADEA+    VG      +YL +  I+   +      +HPGYGFLSEN EFA ++   G+ +IGP    + ++GDK+ ++ +A  A V T+PG  G ++  ++A+    E                        DD                      +E+F+D P+HIE+Q+</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>60.8474</Hsp_bit-score>
      <Hsp_score>146</Hsp_score>
      <Hsp_evalue>1.81994e-09</Hsp_evalue>
      <Hsp_query-from>693</Hsp_query-from>
      <Hsp_query-to>1118</Hsp_query-to>
      <Hsp_hit-from>278</Hsp_hit-from>
      <Hsp_hit-to>477</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>67</Hsp_identity>
      <Hsp_positive>94</Hsp_positive>
      <Hsp_gaps>66</Hsp_gaps>
      <Hsp_align-len>204</Hsp_align-len>
      <Hsp_qseq>DAVKIAREIDDR------LLIEK-----FID-NPRHIEIQVEHPITECITGLDLVMEMIRVAAGH---RLRLSQSEVPIRGWAIECRVYAE--------------------------------------------LV--TYGGDRKEALRR-MVEALDSYVIRGVTHNIPLLREIITNQRFITGDISTKFLPEVYPEGFKVLVS</Hsp_qseq>
      <Hsp_hseq>DAVKLAKECGYRNAGTAEFLVDNQNRHYFIEINPR---IQVEHTITEEITGIDIVAAQIQIAAGASLPQLGLFQDKITTRGFAIQCRITTEDPAKNFQPDTGRIEVYRSAGGNGVRLDGGNAYAGTIISPHYDSMLVKCSCSGSTYEIVRRKMIRALIEFRIRGVKTNIPFLLTLLTNPVFIEGTYWTTFIDDT-PQLFQMVSS</Hsp_hseq>
      <Hsp_midline>DAVK+A+E   R       L++      FI+ NPR   IQVEH ITE ITG+D+V   I++AAG    +L L Q ++  RG+AI+CR+  E                                            LV  +  G   E +RR M+ AL  + IRGV  NIP L  ++TN  FI G   T F+ +  P+ F+++ S</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>51.6026</Hsp_bit-score>
      <Hsp_score>122</Hsp_score>
      <Hsp_evalue>1.03547e-06</Hsp_evalue>
      <Hsp_query-from>1240</Hsp_query-from>
      <Hsp_query-to>1446</Hsp_query-to>
      <Hsp_hit-from>1101</Hsp_hit-from>
      <Hsp_hit-to>1169</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>39</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>69</Hsp_align-len>
      <Hsp_qseq>LFVLSPMPGTVVNVSCKAGDQVSAGQEVCVIEAMKMQNSLTASRSGQVKAIHFAAGDTVGEGDVLVELE</Hsp_qseq>
      <Hsp_hseq>LHIGAPMAGVIVEVKVHKGSLIKKGQPVAVLSAMKMEMIISSPSDGQVKEVFVSDGENVDSSDLLVLLE</Hsp_hseq>
      <Hsp_midline>L + +PM G +V V    G  +  GQ V V+ AMKM+  +++   GQVK +  + G+ V   D+LV LE</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YNR016C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:654673:661374:-1 gene:YNR016C transcript:YNR016C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ACC1 description:Acetyl-CoA carboxylase, biotin containing enzyme; catalyzes carboxylation of cytosolic acetyl-CoA to form malonyl-CoA and regulates histone acetylation by regulating the availablity of acetyl-CoA; required for de novo biosynthesis of long-chain fatty acids; ACC1 has a paralog, HFA1, that arose from the whole genome duplication [Source:SGD;Acc:S000005299]</Hit_def>
  <Hit_accession>YNR016C</Hit_accession>
  <Hit_len>2233</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>78.5666</Hsp_bit-score>
      <Hsp_score>192</Hsp_score>
      <Hsp_evalue>7.89786e-15</Hsp_evalue>
      <Hsp_query-from>276</Hsp_query-from>
      <Hsp_query-to>662</Hsp_query-to>
      <Hsp_hit-from>61</Hsp_hit-from>
      <Hsp_hit-to>202</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>48</Hsp_identity>
      <Hsp_positive>77</Hsp_positive>
      <Hsp_gaps>13</Hsp_gaps>
      <Hsp_align-len>142</Hsp_align-len>
      <Hsp_qseq>KILIANRGEIACRVIKTCKKMGITT-----------VAVHSDVDANAVHVKMADEAFCVGPAPTAQSYLNMAAILDAVKTSGAQAVHPGYGFLSENKEFAKQLAAEGVK--FIGPDTHALQAMGDKIESKLIAKTAGVNTIP</Hsp_qseq>
      <Hsp_hseq>KILIANNGIAAVKEIRSVRKWAYETFGDDRTVQFVAMATPEDLEANAEYIRMADQYIEVPGGTNNNNYANVDLIVDIAERADVDAVWAGWGHASENPLLPEKLSQSKRKVIFIGPPGNAMRSLGDKISSTIVAQSAKVPCIP</Hsp_hseq>
      <Hsp_midline>KILIAN G  A + I++ +K    T           +A   D++ANA +++MAD+   V       +Y N+  I+D  + +   AV  G+G  SEN    ++L+    K  FIGP  +A++++GDKI S ++A++A V  IP</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YMR207C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:677193:683564:-1 gene:YMR207C transcript:YMR207C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:HFA1 description:Mitochondrial acetyl-coenzyme A carboxylase; catalyzes production of malonyl-CoA in mitochondrial fatty acid biosynthesis; relocalizes from mitochondrion to cytoplasm upon DNA replication stress; genetic and comparative analysis suggests that translation begins at a non-canonical (Ile) start codon at -372 relative to the annotated start codon [Source:SGD;Acc:S000004820]</Hit_def>
  <Hit_accession>YMR207C</Hit_accession>
  <Hit_len>2123</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>67.781</Hsp_bit-score>
      <Hsp_score>164</Hsp_score>
      <Hsp_evalue>1.41772e-11</Hsp_evalue>
      <Hsp_query-from>330</Hsp_query-from>
      <Hsp_query-to>662</Hsp_query-to>
      <Hsp_hit-from>16</Hsp_hit-from>
      <Hsp_hit-to>128</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>62</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>113</Hsp_align-len>
      <Hsp_qseq>KKMGITTVAVHSDVDANAVHVKMADEAFCVGPAPTAQSYLNMAAILDAVKTSGAQAVHPGYGFLSENKEFAKQLAAEGVK--FIGPDTHALQAMGDKIESKLIAKTAGVNTIP</Hsp_qseq>
      <Hsp_hseq>KIIQFVVMATPDDLHANSEYIRMADQYVQVPGGTNNNNYANIDLILDVAEQTDVDAVWAGWGHASENPCLPELLASSQRKILFIGPPGRAMRSLGDKISSTIVAQSAKIPCIP</Hsp_hseq>
      <Hsp_midline>K +    +A   D+ AN+ +++MAD+   V       +Y N+  ILD  + +   AV  G+G  SEN    + LA+   K  FIGP   A++++GDKI S ++A++A +  IP</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>50.0618</Hsp_bit-score>
      <Hsp_score>118</Hsp_score>
      <Hsp_evalue>3.93059e-06</Hsp_evalue>
      <Hsp_query-from>1246</Hsp_query-from>
      <Hsp_query-to>1443</Hsp_query-to>
      <Hsp_hit-from>622</Hsp_hit-from>
      <Hsp_hit-to>686</Hsp_hit-to>
      <Hsp_query-frame>1</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>26</Hsp_identity>
      <Hsp_positive>37</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>66</Hsp_align-len>
      <Hsp_qseq>VLSPMPGTVVNVSCKAGDQVSAGQEVCVIEAMKMQNSLTASRSGQVKAIHFAAGDTVGEGDVLVEL</Hsp_qseq>
      <Hsp_hseq>VISPTPGKLVKYLVRSGDHVFAGQQYAEIEIMKMQMPLVAKSDGVIELLR-QPGSIIEAGDVIAKL</Hsp_hseq>
      <Hsp_midline>V+SP PG +V    ++GD V AGQ+   IE MKMQ  L A   G ++ +    G  +  GDV+ +L</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>103</Statistics_hsp-len>
      <Statistics_eff-space>3492159321</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>11</Iteration_iter-num>
  <Iteration_query-ID>Query_11</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055778-RA transcript Note:&quot;Similar to Rap2b Ras-related protein Rap-2b (Rattus norvegicus)&quot; offset:548 AED:0.19 eAED:0.19 QI:548|1|1|1|0.25|0|5|2951|183</Iteration_query-def>
  <Iteration_query-len>4051</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YGR152C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:794674:795492:-1 gene:YGR152C transcript:YGR152C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSR1 description:GTP-binding protein of the Ras superfamily; required for bud site selection, morphological changes in response to mating pheromone, and efficient cell fusion; localized to the plasma membrane; significantly similar to mammalian Rap GTPases [Source:SGD;Acc:S000003384]</Hit_def>
  <Hit_accession>YGR152C</Hit_accession>
  <Hit_len>272</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>166.777</Hsp_bit-score>
      <Hsp_score>421</Hsp_score>
      <Hsp_evalue>1.80171e-46</Hsp_evalue>
      <Hsp_query-from>549</Hsp_query-from>
      <Hsp_query-to>1040</Hsp_query-to>
      <Hsp_hit-from>1</Hsp_hit-from>
      <Hsp_hit-to>165</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>90</Hsp_identity>
      <Hsp_positive>128</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>165</Hsp_align-len>
      <Hsp_qseq>MREYXXXXXXXXXXXXXALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDLEGEREVAYGEGRALADEWG-CPFMETSAKRKATVDDLFAEIVRQM</Hsp_qseq>
      <Hsp_hseq>MRDYKLVVLGAGGVGKSCLTVQFVQGVYLDTYDPTIEDSYRKTIEIDNKVFDLEILDTAGIAQFTAMRELYIKSGMGFLLVYSVTDRQSLEELMELREQVLRIKDSDRVPMVLIGNKADLINERVISVEEGIEVSSKWGRVPFYETSALLRSNVDEVFVDLVRQI</Hsp_hseq>
      <Hsp_midline>MR+YK+VVLG+GGVGKS LTVQFV G +++ YDPTIED YRK IE+D+    LEILDTAG  QF +MR+LYIK+G GF+LVYS+ ++QS +++  +REQ+ R+K  ++VP++L+GNK DL  ER ++  EG  ++ +WG  PF ETSA  ++ VD++F ++VRQ+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>2</Hit_num>
  <Hit_id>YOR101W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:515244:516173:1 gene:YOR101W transcript:YOR101W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAS1 description:GTPase involved in G-protein signaling in adenylate cyclase activation; plays a role in cell proliferation; localized to the plasma membrane; homolog of mammalian RAS proto-oncogenes; relative distribution to the nucleus increases upon DNA replication stress; RAS1 has a paralog, RAS2, that arose from the whole genome duplication [Source:SGD;Acc:S000005627]</Hit_def>
  <Hit_accession>YOR101W</Hit_accession>
  <Hit_len>309</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>162.54</Hsp_bit-score>
      <Hsp_score>410</Hsp_score>
      <Hsp_evalue>1.44037e-44</Hsp_evalue>
      <Hsp_query-from>540</Hsp_query-from>
      <Hsp_query-to>1034</Hsp_query-to>
      <Hsp_hit-from>5</Hsp_hit-from>
      <Hsp_hit-to>169</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>82</Hsp_identity>
      <Hsp_positive>127</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>165</Hsp_align-len>
      <Hsp_qseq>RAAMREYXXXXXXXXXXXXXALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDLEGEREVAYGEGRALADEWGCPFMETSAKRKATVDDLFAEIVR</Hsp_qseq>
      <Hsp_hseq>KSTIREYKIVVVGGGGVGKSALTIQFIQSYFVDEYDPTIEDSYRKQVVIDDKVSILDILDTAGQEEYSAMREQYMRTGEGFLLVYSVTSRNSFDELLSYYQQIQRVKDSDYIPVVVVGNKLDLENERQVSYEDGLRLAKQLNAPFLETSAKQAINVDEAFYSLIR</Hsp_hseq>
      <Hsp_midline>++ +REYK+VV+G GGVGKSALT+QF+   F+++YDPTIED YRK++ +D   S+L+ILDTAG E++++MR+ Y++ G+GF+LVYS+ ++ SF ++    +QI RVK  + +P+++VGNK+DLE ER+V+Y +G  LA +   PF+ETSAK+   VD+ F  ++R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>3</Hit_num>
  <Hit_id>YNL098C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:439602:440570:-1 gene:YNL098C transcript:YNL098C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RAS2 description:GTP-binding protein; regulates nitrogen starvation response, sporulation, and filamentous growth; farnesylation and palmitoylation required for activity and localization to plasma membrane; homolog of mammalian Ras proto-oncogenes; RAS2 has a paralog, RAS1, that arose from the whole genome duplication [Source:SGD;Acc:S000005042]</Hit_def>
  <Hit_accession>YNL098C</Hit_accession>
  <Hit_len>322</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>156.762</Hsp_bit-score>
      <Hsp_score>395</Hsp_score>
      <Hsp_evalue>1.91082e-42</Hsp_evalue>
      <Hsp_query-from>534</Hsp_query-from>
      <Hsp_query-to>1034</Hsp_query-to>
      <Hsp_hit-from>3</Hsp_hit-from>
      <Hsp_hit-to>169</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>81</Hsp_identity>
      <Hsp_positive>124</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>167</Hsp_align-len>
      <Hsp_qseq>LARAAMREYXXXXXXXXXXXXXALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDLEGEREVAYGEGRALADEWGCPFMETSAKRKATVDDLFAEIVR</Hsp_qseq>
      <Hsp_hseq>LNKSNIREYKLVVVGGGGVGKSALTIQLTQSHFVDEYDPTIEDSYRKQVVIDDEVSILDILDTAGQEEYSAMREQYMRNGEGFLLVYSITSKSSLDELMTYYQQILRVKDTDYVPIVVVGNKSDLENEKQVSYQDGLNMAKQMNAPFLETSAKQAINVEEAFYTLAR</Hsp_hseq>
      <Hsp_midline>L ++ +REYK+VV+G GGVGKSALT+Q     F+++YDPTIED YRK++ +D   S+L+ILDTAG E++++MR+ Y++NG+GF+LVYS+ ++ S  ++    +QI RVK  + VPI++VGNK DLE E++V+Y +G  +A +   PF+ETSAK+   V++ F  + R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>4</Hit_num>
  <Hit_id>YOR089C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:490196:490828:-1 gene:YOR089C transcript:YOR089C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VPS21 description:Endosomal Rab family GTPase; required for endocytic transport and sorting of vacuolar hydrolases; required for endosomal localization of the CORVET complex; required with YPT52 for MVB biogenesis and sorting; involved in autophagy and ionic stress tolerance; geranylgeranylation required for membrane association; protein abundance increases in response to DNA replication stress; mammalian Rab5 homolog; VPS21 has a paralog, YPT53, that arose from the whole genome duplication [Source:SGD;Acc:S000005615]</Hit_def>
  <Hit_accession>YOR089C</Hit_accession>
  <Hit_len>210</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>91.6633</Hsp_bit-score>
      <Hsp_score>226</Hsp_score>
      <Hsp_evalue>2.96108e-21</Hsp_evalue>
      <Hsp_query-from>600</Hsp_query-from>
      <Hsp_query-to>1019</Hsp_query-to>
      <Hsp_hit-from>22</Hsp_hit-from>
      <Hsp_hit-to>164</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>55</Hsp_identity>
      <Hsp_positive>84</Hsp_positive>
      <Hsp_gaps>13</Hsp_gaps>
      <Hsp_align-len>148</Hsp_align-len>
      <Hsp_qseq>ALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSF----QDIRPMREQITRVKRYEKVPIILVGNKVDL---EGEREVAYGEGRALADEWGCPFMETSAKRKATVDDLF</Hsp_qseq>
      <Hsp_hseq>SIVLRFVSNDFAENKEPTIGAAFLTQRVTINEHTVKFEIWDTAGQERFASLAPMYYRNAQAALVVYDVTKPQSFIKARHWVKELHEQASK-----DIIIALVGNKIDMLQEGGERKVAREEGEKLAEEKGLLFFETSAKTGENVNDVF</Hsp_hseq>
      <Hsp_midline>++ ++FV+  F E  +PTI   F  + + ++      EI DTAG E+FAS+  +Y +N Q  ++VY +   QSF      ++ + EQ ++      + I LVGNK+D+    GER+VA  EG  LA+E G  F ETSAK    V+D+F</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>5</Hit_num>
  <Hit_id>YFL038C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:55366:55986:-1 gene:YFL038C transcript:YFL038C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT1 description:Rab family GTPase; involved in the ER-to-Golgi step of the secretory pathway; complex formation with the Rab escort protein Mrs6p is required for prenylation of Ypt1p by type II protein geranylgeranyltransferase (Bet2p-Bet4p); binds to unspliced HAC1 mRNA; regulates the unfolded protein response (UPR) by promoting the decay of HAC1 RNA; localizes to the early Golgi, the transitional Golgi and ER membranes, pre-autophagosomal structures, and cytoplasmic vesicles [Source:SGD;Acc:S000001856]</Hit_def>
  <Hit_accession>YFL038C</Hit_accession>
  <Hit_len>206</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>89.3521</Hsp_bit-score>
      <Hsp_score>220</Hsp_score>
      <Hsp_evalue>2.05059e-20</Hsp_evalue>
      <Hsp_query-from>600</Hsp_query-from>
      <Hsp_query-to>1040</Hsp_query-to>
      <Hsp_hit-from>23</Hsp_hit-from>
      <Hsp_hit-to>169</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>53</Hsp_identity>
      <Hsp_positive>79</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>148</Hsp_align-len>
      <Hsp_qseq>ALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDLEGEREVAYGEGRALADEWGCPFMETSAKRKATVDDLFAEIVRQM</Hsp_qseq>
      <Hsp_hseq>CLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDTAGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVKMWLQEIDRYAT-STVLKLLVGNKCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI</Hsp_hseq>
      <Hsp_midline> L ++F   T+   Y  TI  DF  K +E+D     L+I DTAG E+F ++   Y +   G I+VY + +Q+SF  ++   ++I R      V  +LVGNK DL+ +R V Y   +  AD    PF+ETSA     V+D F  + RQ+</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>6</Hit_num>
  <Hit_id>YCR027C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:III:167370:167999:-1 gene:YCR027C transcript:YCR027C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHB1 description:Putative Rheb-related GTPase; involved in regulating canavanine resistance and arginine uptake; member of the Ras superfamily of G-proteins [Source:SGD;Acc:S000000622]</Hit_def>
  <Hit_accession>YCR027C</Hit_accession>
  <Hit_len>209</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>83.1889</Hsp_bit-score>
      <Hsp_score>204</Hsp_score>
      <Hsp_evalue>2.25062e-18</Hsp_evalue>
      <Hsp_query-from>600</Hsp_query-from>
      <Hsp_query-to>1040</Hsp_query-to>
      <Hsp_hit-from>31</Hsp_hit-from>
      <Hsp_hit-to>189</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>55</Hsp_identity>
      <Hsp_positive>85</Hsp_positive>
      <Hsp_gaps>12</Hsp_gaps>
      <Hsp_align-len>159</Hsp_align-len>
      <Hsp_qseq>ALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDL----EG-EREVAYGEGRALADEWG-------CPFMETSAKRKATVDDLFAEIVRQM</Hsp_qseq>
      <Hsp_hseq>TLTVRFVESRFVESYYPTIENEFTRIIPYKSHDCTLEILDTAGQDEVSLLNIKSLTGVRGIILCYSIINRASFDLIPILWDKLVDQLGKDNLPVILVGTKADLGRSTKGVKRCVTKAEGEKLASTIGSQDKRNQAAFIECSAELDYNVEETFMLLLKQM</Hsp_hseq>
      <Hsp_midline> LTV+FV   F+E Y PTIE+ + + I   S    LEILDTAG ++ + +    +   +G IL YS++N+ SF  I  + +++      + +P+ILVG K DL    +G +R V   EG  LA   G         F+E SA+    V++ F  +++QM</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>7</Hit_num>
  <Hit_id>YFL005W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VI:130334:130981:1 gene:YFL005W transcript:YFL005W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SEC4 description:Rab family GTPase; essential for vesicle-mediated exocytic secretion and autophagy; associates with the exocyst component Sec15p and may regulate polarized delivery of transport vesicles to the exocyst at the plasma membrane [Source:SGD;Acc:S000001889]</Hit_def>
  <Hit_accession>YFL005W</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>81.2629</Hsp_bit-score>
      <Hsp_score>199</Hsp_score>
      <Hsp_evalue>1.37619e-17</Hsp_evalue>
      <Hsp_query-from>600</Hsp_query-from>
      <Hsp_query-to>1034</Hsp_query-to>
      <Hsp_hit-from>35</Hsp_hit-from>
      <Hsp_hit-to>178</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>48</Hsp_identity>
      <Hsp_positive>82</Hsp_positive>
      <Hsp_gaps>3</Hsp_gaps>
      <Hsp_align-len>146</Hsp_align-len>
      <Hsp_qseq>ALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDLEGEREVAYGEGRALADEWGCPFMETSAKRKATVDDLFAEIVR</Hsp_qseq>
      <Hsp_hseq>CLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQWFKTVNE-HANDEAQLLLVGNKSDME-TRVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAK</Hsp_hseq>
      <Hsp_midline> L V+FV   F   +  TI  DF  K ++++     L++ DTAG E+F ++   Y +   G ILVY + ++++F +I+   + +      ++  ++LVGNK D+E  R V   +G ALA E G PF+E+SAK    V+++F  + +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>8</Hit_num>
  <Hit_id>YLR262C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:668244:668891:-1 gene:YLR262C transcript:YLR262C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT6 description:Rab family GTPase; required for endosome-to-Golgii, intra-Golgi retrograde, and retrograde Golgi-to-ER transport; temporarily at the Golgi, dissociating into the cytosol on arrival of the late Golgi GTPase Ypt32p; Golgi-localized form is GTP bound, while cytosolic form is GDP-bound; required for delivery of Atg9p to the phagophore assembly site during autophagy under heat stress, with Ypt6p for starvation induced autophagy and for the CVT pathway; homolog of mammalian Rab6 [Source:SGD;Acc:S000004252]</Hit_def>
  <Hit_accession>YLR262C</Hit_accession>
  <Hit_len>215</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>80.1073</Hsp_bit-score>
      <Hsp_score>196</Hsp_score>
      <Hsp_evalue>3.92405e-17</Hsp_evalue>
      <Hsp_query-from>600</Hsp_query-from>
      <Hsp_query-to>1040</Hsp_query-to>
      <Hsp_hit-from>25</Hsp_hit-from>
      <Hsp_hit-to>173</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>52</Hsp_identity>
      <Hsp_positive>80</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>149</Hsp_align-len>
      <Hsp_qseq>ALTVQFVTGTFIEKYDPTIE-DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDLEGEREVAYGEGRALADEWGCP-FMETSAKRKATVDDLFAEIVRQM</Hsp_qseq>
      <Hsp_hseq>SLITRFMYDTFDDHYQATIGIDFLSKTMYLDDKTIRLQLWDTAGQERFRSLIPSYIRDSRVAIIVYDITKRKSFEYIDKWIEDVKNERGDENVILCIVGNKSDLSDERQISTEEGEKKAKLLGAKIFMETSTKAGYNVKALFKKIAKSL</Hsp_hseq>
      <Hsp_midline>+L  +F+  TF + Y  TI  DF  K + +D     L++ DTAG E+F S+   YI++ +  I+VY +  ++SF+ I    E +   +  E V + +VGNK DL  ER+++  EG   A   G   FMETS K    V  LF +I + +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>9</Hit_num>
  <Hit_id>YML001W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIII:267174:267800:1 gene:YML001W transcript:YML001W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT7 description:Rab family GTPase; GTP-binding protein of the rab family; required for homotypic fusion event in vacuole inheritance, for endosome-endosome fusion; localizes to sites of contact between the vacuole and mitochondria (vCLAMPs); interacts with the cargo selection/retromer complex for retrograde sorting; similar to mammalian Rab7 [Source:SGD;Acc:S000004460]</Hit_def>
  <Hit_accession>YML001W</Hit_accession>
  <Hit_len>208</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>77.0258</Hsp_bit-score>
      <Hsp_score>188</Hsp_score>
      <Hsp_evalue>3.02528e-16</Hsp_evalue>
      <Hsp_query-from>600</Hsp_query-from>
      <Hsp_query-to>1061</Hsp_query-to>
      <Hsp_hit-from>23</Hsp_hit-from>
      <Hsp_hit-to>183</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>51</Hsp_identity>
      <Hsp_positive>81</Hsp_positive>
      <Hsp_gaps>7</Hsp_gaps>
      <Hsp_align-len>161</Hsp_align-len>
      <Hsp_qseq>ALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSP-SVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQI---TRVKRYEKVPIILVGNKVDLEGERE-VAYGEGRALADEWG-CPFMETSAKRKATVDDLFAEIVRQMNYAAQPD</Hsp_qseq>
      <Hsp_hseq>SLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAEESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQAD</Hsp_hseq>
      <Hsp_midline>+L  ++V   + ++Y  TI  DF  KE+ VD    + +++ DTAG E+F S+   + +     +LVY + N  SF++I+  R++      V   E  P +++GNK+D E  ++ V+    + LA   G  P   TSAK    VD  F EI R      Q D</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>10</Hit_num>
  <Hit_id>YPR165W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XVI:875368:875997:1 gene:YPR165W transcript:YPR165W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO1 description:GTP-binding protein of the rho subfamily of Ras-like proteins; involved in establishment of cell polarity; regulates protein kinase C (Pkc1p) and the cell wall synthesizing enzyme 1,3-beta-glucan synthase (Fks1p and Gsc2p) [Source:SGD;Acc:S000006369]</Hit_def>
  <Hit_accession>YPR165W</Hit_accession>
  <Hit_len>209</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>65.855</Hsp_bit-score>
      <Hsp_score>159</Hsp_score>
      <Hsp_evalue>2.21666e-12</Hsp_evalue>
      <Hsp_query-from>600</Hsp_query-from>
      <Hsp_query-to>1034</Hsp_query-to>
      <Hsp_hit-from>25</Hsp_hit-from>
      <Hsp_hit-to>181</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>50</Hsp_identity>
      <Hsp_positive>79</Hsp_positive>
      <Hsp_gaps>16</Hsp_gaps>
      <Hsp_align-len>159</Hsp_align-len>
      <Hsp_qseq>ALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRY-EKVPIILVGNKVDL------------EGEREVAYGEGRALADEWGCP-FMETSAKRKATVDDLFAEIVR</Hsp_qseq>
      <Hsp_hseq>CLLIVFSKGQFPEVYVPTVFENYVADVEVDGRRVELALWDTAGQEDYDRLRPLSYPDSNVVLICFSIDLPDSLENVQ--EKWIAEVLHFCQGVPIILVGCKVDLRNDPQTIEQLRQEGQQPVTSQEGQSVADQIGATGYYECSAKTGYGVREVFEAATR</Hsp_hseq>
      <Hsp_midline> L + F  G F E Y PT+ + Y  ++EVD     L + DTAG E +  +R L   +    ++ +S+    S ++++   + I  V  + + VPIILVG KVDL            EG++ V   EG+++AD+ G   + E SAK    V ++F    R</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>11</Hit_num>
  <Hit_id>YIL118W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:IX:139752:140447:1 gene:YIL118W transcript:YIL118W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO3 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity; GTPase activity positively regulated by the GTPase activating protein (GAP) Rgd1p [Source:SGD;Acc:S000001380]</Hit_def>
  <Hit_accession>YIL118W</Hit_accession>
  <Hit_len>231</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>61.2326</Hsp_bit-score>
      <Hsp_score>147</Hsp_score>
      <Hsp_evalue>1.24528e-10</Hsp_evalue>
      <Hsp_query-from>615</Hsp_query-from>
      <Hsp_query-to>1076</Hsp_query-to>
      <Hsp_hit-from>36</Hsp_hit-from>
      <Hsp_hit-to>228</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>51</Hsp_identity>
      <Hsp_positive>86</Hsp_positive>
      <Hsp_gaps>43</Hsp_gaps>
      <Hsp_align-len>195</Hsp_align-len>
      <Hsp_qseq>FVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRY-EKVPIILVGNKVDL---------------------------------EGEREVAYGEGRALADEWGC-PFMETSAKRKATVDDLFAEIVRQMNYAA------QPDAGQAC</Hsp_qseq>
      <Hsp_hseq>FTRGYFPEVYEPTVFENYIHDIFVDSKHITLSLWDTAGQEEFDRLRSLSYSDTQCIMLCFSIDSRDSLENVQ--NKWVGEITDHCEGVKLVLVALKCDLRNNENESNAITPNNIQQDNSVSNDNGNNINSTSNGKNLISYEEGLAMAKKIGALRYLECSAKLNKGVNEAFTEAARVALTAGPVATEVKSDSGSSC</Hsp_hseq>
      <Hsp_midline>F  G F E Y+PT+ + Y  +I VDS    L + DTAG E+F  +R L   + Q  +L +S+ ++ S ++++   + +  +  + E V ++LV  K DL                                  G+  ++Y EG A+A + G   ++E SAK    V++ F E  R    A       + D+G +C</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>12</Hit_num>
  <Hit_id>YNL093W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:449868:450530:1 gene:YNL093W transcript:YNL093W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT53 description:Stress-induced Rab family GTPase; required for vacuolar protein sorting and endocytosis; involved in ionic stress tolerance; similar to Vps21p and Ypt52p; functional homolog of Vps21p; mammalian Rab5 homolog; YPT53 has a paralog, VPS21, that arose from the whole genome duplication [Source:SGD;Acc:S000005037]</Hit_def>
  <Hit_accession>YNL093W</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>59.6918</Hsp_bit-score>
      <Hsp_score>143</Hsp_score>
      <Hsp_evalue>3.24381e-10</Hsp_evalue>
      <Hsp_query-from>600</Hsp_query-from>
      <Hsp_query-to>908</Hsp_query-to>
      <Hsp_hit-from>27</Hsp_hit-from>
      <Hsp_hit-to>129</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>37</Hsp_identity>
      <Hsp_positive>57</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>104</Hsp_align-len>
      <Hsp_qseq>ALTVQFVTGTFIEKYDPTI-EDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDL</Hsp_qseq>
      <Hsp_hseq>SIVLRFVSDDFKESKEPTIGAAFLTKRITRDGKVIKFEIWDTAGQERFAPLAPMYYRNAQAALVVFDVTNEGSFYKAQNWVEELHE-KVGHDIVIALVGNKMDL</Hsp_hseq>
      <Hsp_midline>++ ++FV+  F E  +PTI   F  K I  D      EI DTAG E+FA +  +Y +N Q  ++V+ + N+ SF   +   E++   K    + I LVGNK+DL</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>13</Hit_num>
  <Hit_id>YER031C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:214076:214747:-1 gene:YER031C transcript:YER031C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT31 description:Rab family GTPase; involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; YPT31 has a paralog, YPT32, that arose from the whole genome duplication; localizes to the transitional and late Golgi [Source:SGD;Acc:S000000833]</Hit_def>
  <Hit_accession>YER031C</Hit_accession>
  <Hit_len>223</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>59.3066</Hsp_bit-score>
      <Hsp_score>142</Hsp_score>
      <Hsp_evalue>5.41671e-10</Hsp_evalue>
      <Hsp_query-from>660</Hsp_query-from>
      <Hsp_query-to>1040</Hsp_query-to>
      <Hsp_hit-from>49</Hsp_hit-from>
      <Hsp_hit-to>174</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>36</Hsp_identity>
      <Hsp_positive>61</Hsp_positive>
      <Hsp_gaps>1</Hsp_gaps>
      <Hsp_align-len>127</Hsp_align-len>
      <Hsp_qseq>DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDLEGEREVAYGEGRALADEWGCPFMETSAKRKATVDDLFAEIVRQM</Hsp_qseq>
      <Hsp_hseq>EFATRTLEIDGKRIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLSEL-RENADDNVAVGLIGNKSDLAHLRAVPTEESKTFAQENQLLFTETSALNSENVDKAFEELINTI</Hsp_hseq>
      <Hsp_midline>+F  + +E+D      +I DTAG E++ ++   Y +   G ++VY +    S+++      ++ R    + V + L+GNK DL   R V   E +  A E    F ETSA     VD  F E++  +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>14</Hit_num>
  <Hit_id>YGL210W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:VII:93792:94460:1 gene:YGL210W transcript:YGL210W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT32 description:Rab family GTPase involved in the exocytic pathway; mediates intra-Golgi traffic or the budding of post-Golgi vesicles from the trans-Golgi; protein abundance increases in response to DNA replication stress; YPT32 has a paralog, YPT31, that arose from the whole genome duplication [Source:SGD;Acc:S000003178]</Hit_def>
  <Hit_accession>YGL210W</Hit_accession>
  <Hit_len>222</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>58.9214</Hsp_bit-score>
      <Hsp_score>141</Hsp_score>
      <Hsp_evalue>5.80564e-10</Hsp_evalue>
      <Hsp_query-from>603</Hsp_query-from>
      <Hsp_query-to>1031</Hsp_query-to>
      <Hsp_hit-from>29</Hsp_hit-from>
      <Hsp_hit-to>171</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>43</Hsp_identity>
      <Hsp_positive>68</Hsp_positive>
      <Hsp_gaps>2</Hsp_gaps>
      <Hsp_align-len>144</Hsp_align-len>
      <Hsp_qseq>LTVQFVTGTF-IEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDLEGEREVAYGEGRALADEWGCPFMETSAKRKATVDDLFAEIV</Hsp_qseq>
      <Hsp_hseq>LLSRFTTDEFNIESKSTIGVEFATRTIEVENKKIKAQIWDTAGQERYRAITSAYYRGAVGALIVYDISKSSSYENCNHWLTEL-RENADDNVAVGLIGNKSDLAHLRAVPTDEAKNFAMENQMLFTETSALNSDNVDKAFRELI</Hsp_hseq>
      <Hsp_midline>L  +F T  F IE       +F  + IEV++     +I DTAG E++ ++   Y +   G ++VY +    S+++      ++ R    + V + L+GNK DL   R V   E +  A E    F ETSA     VD  F E++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>15</Hit_num>
  <Hit_id>YLR293C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:720771:721430:-1 gene:YLR293C transcript:YLR293C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GSP1 description:Ran GTPase; GTP binding protein (mammalian Ranp homolog) involved in the maintenance of nuclear organization, RNA processing and transport; regulated by Srm1p, Rna1p, Yrb1p, Yrb2p, Yrp4p, Yrb30p, Cse1p and Kap95p; GSP1 has a paralog, GSP2, that arose from the whole genome duplication [Source:SGD;Acc:S000004284]</Hit_def>
  <Hit_accession>YLR293C</Hit_accession>
  <Hit_len>219</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>56.225</Hsp_bit-score>
      <Hsp_score>134</Hsp_score>
      <Hsp_evalue>5.17969e-09</Hsp_evalue>
      <Hsp_query-from>612</Hsp_query-from>
      <Hsp_query-to>926</Hsp_query-to>
      <Hsp_hit-from>31</Hsp_hit-from>
      <Hsp_hit-to>133</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>36</Hsp_identity>
      <Hsp_positive>61</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>111</Hsp_align-len>
      <Hsp_qseq>QFVTGTFIEKYDPTIE------DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDLEGEREV</Hsp_qseq>
      <Hsp_hseq>RHLTGEFEKKYIATIGVEVHPLSFYTNFGEIK-----FDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRV--CENIPIVLCGNKVDVK-ERKV</Hsp_hseq>
      <Hsp_midline>+ +TG F +KY  TI        FY    E+       ++ DTAG E+F  +RD Y  N Q  I+++ + ++ +++++      + RV   E +PI+L GNKVD++ ER+V</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>16</Hit_num>
  <Hit_id>YLR229C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XII:604212:604787:-1 gene:YLR229C transcript:YLR229C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CDC42 description:Small rho-like GTPase; essential for establishment and maintenance of cell polarity; plays a role late in cell fusion via activation of key cell fusion regulator Fus2p; mutants have defects in the organization of actin and septins; human homolog CDC42 can complement yeast cdc42 mutant [Source:SGD;Acc:S000004219]</Hit_def>
  <Hit_accession>YLR229C</Hit_accession>
  <Hit_len>191</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.4546</Hsp_bit-score>
      <Hsp_score>132</Hsp_score>
      <Hsp_evalue>5.4788e-09</Hsp_evalue>
      <Hsp_query-from>600</Hsp_query-from>
      <Hsp_query-to>1031</Hsp_query-to>
      <Hsp_hit-from>18</Hsp_hit-from>
      <Hsp_hit-to>173</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>38</Hsp_identity>
      <Hsp_positive>73</Hsp_positive>
      <Hsp_gaps>16</Hsp_gaps>
      <Hsp_align-len>158</Hsp_align-len>
      <Hsp_qseq>ALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRY-EKVPIILVGNKVDLEGE------------REVAYGEGRALADEW-GCPFMETSAKRKATVDDLFAEIV</Hsp_qseq>
      <Hsp_hseq>CLLISYTTNQFPADYVPTVFDNYAVTVMIGDEPYTLGLFDTAGQEDYDRLRPLSYPSTDVFLVCFSVISPPSFENVK--EKWFPEVHHHCPGVPCLVVGTQIDLRDDKVIIEKLQRQRLRPITSEQGSRLARELKAVKYVECSALTQRGLKNVFDEAI</Hsp_hseq>
      <Hsp_midline> L + + T  F   Y PT+ D Y   + +   P  L + DTAG E +  +R L   +   F++ +S+++  SF++++   +    V  +   VP ++VG ++DL  +            R +   +G  LA E     ++E SA  +  + ++F E +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>17</Hit_num>
  <Hit_id>YNL090W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XIV:456565:457143:1 gene:YNL090W transcript:YNL090W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO2 description:Non-essential small GTPase of the Rho/Rac family of Ras-like proteins; involved in the establishment of cell polarity and in microtubule assembly [Source:SGD;Acc:S000005034]</Hit_def>
  <Hit_accession>YNL090W</Hit_accession>
  <Hit_len>192</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.4546</Hsp_bit-score>
      <Hsp_score>132</Hsp_score>
      <Hsp_evalue>6.2986e-09</Hsp_evalue>
      <Hsp_query-from>600</Hsp_query-from>
      <Hsp_query-to>1079</Hsp_query-to>
      <Hsp_hit-from>22</Hsp_hit-from>
      <Hsp_hit-to>189</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>47</Hsp_identity>
      <Hsp_positive>75</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>171</Hsp_align-len>
      <Hsp_qseq>ALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRY-EKVPIILVGNKVDLEGERE---------VAYGEGRALADEWGC-PFMETSAKRKATVDDLFAEIVRQMNYAAQPDAGQACC</Hsp_qseq>
      <Hsp_hseq>SLLYVFTLGKFPEQYHPTVFENYVTDCRVDGIKVSLTLWDTAGQEEYERLRPFSYSKADIILIGFAVDNFESLINAR--TKWADEALRYCPDAPIVLVGLKKDLRQEAHFKENATDEMVPIEDAKQVARAIGAKKYMECSALTGEGVDDVF-EVATRTSLLMKKEPGANCC</Hsp_hseq>
      <Hsp_midline>+L   F  G F E+Y PT+ + Y  +  VD     L + DTAG E++  +R          ++ +++ N +S  + R   +      RY    PI+LVG K DL  E           V   + + +A   G   +ME SA     VDD+F E+  + +   + + G  CC</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>18</Hit_num>
  <Hit_id>YOR185C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XV:681444:682106:-1 gene:YOR185C transcript:YOR185C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:GSP2 description:GTP binding protein (mammalian Ranp homolog); involved in the maintenance of nuclear organization, RNA processing and transport; interacts with Kap121p, Kap123p and Pdr6p (karyophilin betas); not required for viability; protein abundance increases in response to DNA replication stress; GSP2 has a paralog, GSP1, that arose from the whole genome duplication [Source:SGD;Acc:S000005711]</Hit_def>
  <Hit_accession>YOR185C</Hit_accession>
  <Hit_len>220</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.8398</Hsp_bit-score>
      <Hsp_score>133</Hsp_score>
      <Hsp_evalue>7.41611e-09</Hsp_evalue>
      <Hsp_query-from>618</Hsp_query-from>
      <Hsp_query-to>926</Hsp_query-to>
      <Hsp_hit-from>34</Hsp_hit-from>
      <Hsp_hit-to>134</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>36</Hsp_identity>
      <Hsp_positive>60</Hsp_positive>
      <Hsp_gaps>14</Hsp_gaps>
      <Hsp_align-len>109</Hsp_align-len>
      <Hsp_qseq>VTGTFIEKYDPTIE------DFYRKEIEVDSSPSVLEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDLEGEREV</Hsp_qseq>
      <Hsp_hseq>LTGEFEKKYIATIGVEVHPLSFYTNFGEIK-----FDVWDTAGQEKFGGLRDGYYINAQCAIIMFDVTSRITYKNVPNWHRDLVRV--CENIPIVLCGNKVDVK-ERKV</Hsp_hseq>
      <Hsp_midline>+TG F +KY  TI        FY    E+       ++ DTAG E+F  +RD Y  N Q  I+++ + ++ +++++      + RV   E +PI+L GNKVD++ ER+V</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>19</Hit_num>
  <Hit_id>YKR055W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:548216:549091:1 gene:YKR055W transcript:YKR055W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RHO4 description:Non-essential small GTPase; member of the Rho/Rac subfamily of Ras-like proteins; likely to be involved in the establishment of cell polarity; has long N-terminal extension that plays an important role in Rho4p function and is shared with Rho4 homologs in other yeasts and filamentous fungi [Source:SGD;Acc:S000001763]</Hit_def>
  <Hit_accession>YKR055W</Hit_accession>
  <Hit_len>291</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>55.8398</Hsp_bit-score>
      <Hsp_score>133</Hsp_score>
      <Hsp_evalue>1.33851e-08</Hsp_evalue>
      <Hsp_query-from>600</Hsp_query-from>
      <Hsp_query-to>1040</Hsp_query-to>
      <Hsp_hit-from>87</Hsp_hit-from>
      <Hsp_hit-to>238</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>44</Hsp_identity>
      <Hsp_positive>75</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>154</Hsp_align-len>
      <Hsp_qseq>ALTVQFVTGTFIEKYDPTIEDFYRKEIEVDSSPSV-LEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRY-EKVPIILVGNKVDL-EGER---EVAYGEGRALADEWGC-PFMETSAKRKATVDDLFAEIVRQM</Hsp_qseq>
      <Hsp_hseq>CLLISYVQGTFPTDYIPTIFENYVTNIEGPNGQIIELALWDTAGQEEYSRLRPLSYTNADVLMVCYSVGSKTSLKNVEDL--WFPEVKHFCPSTPIMLVGLKSDLYEADNLSDLVEPSSAESLAKRLGAFAHIQCSARLKENIDEVFETAIHTL</Hsp_hseq>
      <Hsp_midline> L + +V GTF   Y PTI + Y   IE  +   + L + DTAG E+++ +R L   N    ++ YS+ ++ S +++  +      VK +    PI+LVG K DL E +     V      +LA   G    ++ SA+ K  +D++F   +  +</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
<Hit>
  <Hit_num>20</Hit_num>
  <Hit_id>YKR014C</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:XI:465367:466071:-1 gene:YKR014C transcript:YKR014C_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:YPT52 description:Endosomal Rab family GTPase; required for vacuolar protein sorting, endocytosis and multivesicular body (MVB) biogenesis and sorting; required for localization of the CORVET complex to endosomes; involved in autophagy and ionic stress tolerance; similar to Vps21p and Ypt53p; mammalian Rab5 homolog; protein abundance increases in response to DNA replication stress [Source:SGD;Acc:S000001722]</Hit_def>
  <Hit_accession>YKR014C</Hit_accession>
  <Hit_len>234</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>53.9138</Hsp_bit-score>
      <Hsp_score>128</Hsp_score>
      <Hsp_evalue>4.17164e-08</Hsp_evalue>
      <Hsp_query-from>705</Hsp_query-from>
      <Hsp_query-to>1040</Hsp_query-to>
      <Hsp_hit-from>62</Hsp_hit-from>
      <Hsp_hit-to>193</Hsp_hit-to>
      <Hsp_query-frame>3</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>37</Hsp_identity>
      <Hsp_positive>60</Hsp_positive>
      <Hsp_gaps>20</Hsp_gaps>
      <Hsp_align-len>132</Hsp_align-len>
      <Hsp_qseq>LEILDTAGTEQFASMRDLYIKNGQGFILVYSLVNQQSFQDIRPMREQITRVKRYEKVPIILVGNKVDLEGE--------------------REVAYGEGRALADEWGCPFMETSAKRKATVDDLFAEIVRQM</Hsp_qseq>
      <Hsp_hseq>FEIWDTAGQERYKSLAPMYYRNANAALVVYDITQEDSLQKARNWVDELKNKVGDDDLVIYLLGNKVDLCQETPSTETSPDSNEGGDEEQKVRAISTEEAKQYAQEQGLLFREVSAKTGEGVKEIFQDIGEKL</Hsp_hseq>
      <Hsp_midline> EI DTAG E++ S+  +Y +N    ++VY +  + S Q  R   +++      + + I L+GNKVDL  E                    R ++  E +  A E G  F E SAK    V ++F +I  ++</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>102</Statistics_hsp-len>
      <Statistics_eff-space>2796602016</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>12</Iteration_iter-num>
  <Iteration_query-ID>Query_12</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055779-RA transcript Note:&quot;Similar to Nlgn3 Neuroligin-3 (Mus musculus)&quot; offset:1 AED:0.24 eAED:0.34 QI:1|0|0|1|0.66|0.75|4|0|662</Iteration_query-def>
  <Iteration_query-len>1990</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1293024789</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>13</Iteration_iter-num>
  <Iteration_query-ID>Query_13</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055780-RA transcript Note:&quot;Protein of unknown function&quot; offset:0 AED:0.79 eAED:0.87 QI:0|0|0|0.5|1|0.5|2|0|257</Iteration_query-def>
  <Iteration_query-len>774</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>88</Statistics_hsp-len>
      <Statistics_eff-space>396655390</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>14</Iteration_iter-num>
  <Iteration_query-ID>Query_14</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055768-RA transcript Note:&quot;Similar to PPP2R3A Serine/threonine-protein phosphatase 2A regulatory subunit B&apos;&apos; subunit alpha (Homo sapiens)&quot; offset:0 AED:0.32 eAED:0.32 QI:0|0.25|0.6|1|0.25|0.4|5|1197|283</Iteration_query-def>
  <Iteration_query-len>2049</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1338634129</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>15</Iteration_iter-num>
  <Iteration_query-ID>Query_15</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055771-RA transcript Note:&quot;Similar to ACADVL Very long-chain specific acyl-CoA dehydrogenase, mitochondrial (Bos taurus)&quot; offset:196 AED:0.21 eAED:0.21 QI:196|0.54|0.75|1|0.45|0.5|12|1277|279</Iteration_query-def>
  <Iteration_query-len>2313</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>97</Statistics_hsp-len>
      <Statistics_eff-space>1532586358</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>16</Iteration_iter-num>
  <Iteration_query-ID>Query_16</Iteration_query-ID>
  <Iteration_query-def>PMZ_0003434-RA transcript Note:&quot;Similar to ANOS1 Anosmin-1 (Gallus gallus)&quot; offset:290 AED:1.00 eAED:1.00 QI:290|0|0|0|0|0|10|167|501</Iteration_query-def>
  <Iteration_query-len>1963</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>96</Statistics_hsp-len>
      <Statistics_eff-space>1272500586</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>17</Iteration_iter-num>
  <Iteration_query-ID>Query_17</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055772-RA transcript Note:&quot;Similar to yap1 Transcriptional coactivator YAP1 (Danio rerio)&quot; offset:1483 AED:0.17 eAED:0.20 QI:1483|0.57|0.62|1|0.42|0.37|8|0|525</Iteration_query-def>
  <Iteration_query-len>3061</Iteration_query-len>
<Iteration_hits>
<Hit>
  <Hit_num>1</Hit_num>
  <Hit_id>YER125W</Hit_id>
  <Hit_def>pep chromosome:R64-1-1:V:410189:412618:1 gene:YER125W transcript:YER125W_mRNA gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:RSP5 description:NEDD4 family E3 ubiquitin ligase; regulates processes including: MVB sorting, the heat shock response, transcription, endocytosis and ribosome stability; ubiquitinates Sec23p, Sna3p, Ste4p, Nfi1p, Rpo21p and Sem1p; autoubiquitinates; deubiquitinated by Ubp2p; regulated by SUMO ligase Siz1p, in turn regulates Siz1p SUMO ligase activity; required for efficient Golgi-to-ER trafficking in COPI mutants; mutant tolerates aneuploidy; human homolog implicated in Liddle syndrome [Source:SGD;Acc:S000000927]</Hit_def>
  <Hit_accession>YER125W</Hit_accession>
  <Hit_len>809</Hit_len>
  <Hit_hsps>
    <Hsp>
      <Hsp_num>1</Hsp_num>
      <Hsp_bit-score>88.5817</Hsp_bit-score>
      <Hsp_score>218</Hsp_score>
      <Hsp_evalue>2.72602e-18</Hsp_evalue>
      <Hsp_query-from>2162</Hsp_query-from>
      <Hsp_query-to>2446</Hsp_query-to>
      <Hsp_hit-from>333</Hsp_hit-from>
      <Hsp_hit-to>420</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>45</Hsp_identity>
      <Hsp_positive>53</Hsp_positive>
      <Hsp_gaps>9</Hsp_gaps>
      <Hsp_align-len>96</Hsp_align-len>
      <Hsp_qseq>FPPGWEVAFTAAGQRYFINHNNQTTTWHDPRGVLAAESGAANPGASLVAANRTSAQGP-QQLGPLPDGWEQAVTPDGEVYFIDHKNKTTSWLDPRL</Hsp_qseq>
      <Hsp_hseq>LPSGWEQRFTPEGRAYFVDHNTRTTTWVDPRRQQYIRTYGP--------TNTTIQQQPVSQLGPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPRL</Hsp_hseq>
      <Hsp_midline> P GWE  FT  G+ YF++HN +TTTW DPR      +            N T  Q P  QLGPLP GWE  +T    VYF+DH  KTT+W DPRL</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>2</Hsp_num>
      <Hsp_bit-score>70.0922</Hsp_bit-score>
      <Hsp_score>170</Hsp_score>
      <Hsp_evalue>1.07422e-12</Hsp_evalue>
      <Hsp_query-from>2132</Hsp_query-from>
      <Hsp_query-to>2443</Hsp_query-to>
      <Hsp_hit-from>221</Hsp_hit-from>
      <Hsp_hit-to>363</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>46</Hsp_identity>
      <Hsp_positive>60</Hsp_positive>
      <Hsp_gaps>39</Hsp_gaps>
      <Hsp_align-len>143</Hsp_align-len>
      <Hsp_qseq>YELLDQNDAPFPPGWEVAFTAAGQRYFINHNNQTTTWHDP--------RG-VLAAES--------GAANPGASLVAANRTSAQG----------------------PQQLGPLPDGWEQAVTPDGEVYFIDHKNKTTSWLDPR</Hsp_qseq>
      <Hsp_hseq>YSSFEDQYGRLPPGWERRTDNFGRTYYVDHNTRTTTWKRPTLDQTEAERGNQLNANTELERRQHRGRTLPGGSSDNSSVTVQVGGGSNIPPVNGAAAAAFAATGGTTSGLGELPSGWEQRFTPEGRAYFVDHNTRTTTWVDPR</Hsp_hseq>
      <Hsp_midline>Y   +      PPGWE      G+ Y+++HN +TTTW  P        RG  L A +        G   PG S   ++ T   G                         LG LP GWEQ  TP+G  YF+DH  +TT+W+DPR</Hsp_midline>
    </Hsp>
    <Hsp>
      <Hsp_num>3</Hsp_num>
      <Hsp_bit-score>47.7506</Hsp_bit-score>
      <Hsp_score>112</Hsp_score>
      <Hsp_evalue>9.8784e-06</Hsp_evalue>
      <Hsp_query-from>2156</Hsp_query-from>
      <Hsp_query-to>2254</Hsp_query-to>
      <Hsp_hit-from>387</Hsp_hit-from>
      <Hsp_hit-to>419</Hsp_hit-to>
      <Hsp_query-frame>2</Hsp_query-frame>
      <Hsp_hit-frame>0</Hsp_hit-frame>
      <Hsp_identity>17</Hsp_identity>
      <Hsp_positive>22</Hsp_positive>
      <Hsp_gaps>0</Hsp_gaps>
      <Hsp_align-len>33</Hsp_align-len>
      <Hsp_qseq>APFPPGWEVAFTAAGQRYFINHNNQTTTWHDPR</Hsp_qseq>
      <Hsp_hseq>GPLPSGWEMRLTNTARVYFVDHNTKTTTWDDPR</Hsp_hseq>
      <Hsp_midline> P P GWE+  T   + YF++HN +TTTW DPR</Hsp_midline>
    </Hsp>
  </Hit_hsps>
</Hit>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>2082074307</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
</Iteration>
<Iteration>
  <Iteration_iter-num>18</Iteration_iter-num>
  <Iteration_query-ID>Query_18</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055774-RA transcript Note:&quot;Protein of unknown function&quot; offset:984 AED:0.00 eAED:0.00 QI:984|1|1|1|0|0|3|1792|82</Iteration_query-def>
  <Iteration_query-len>3025</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>99</Statistics_hsp-len>
      <Statistics_eff-space>2054946303</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>19</Iteration_iter-num>
  <Iteration_query-ID>Query_19</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055775-RA transcript Note:&quot;Similar to Serpine2 Glia-derived nexin (Mus musculus)&quot; offset:861 AED:0.16 eAED:0.21 QI:861|0.83|0.85|1|0.83|0.71|7|1451|312</Iteration_query-def>
  <Iteration_query-len>3251</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>100</Statistics_hsp-len>
      <Statistics_eff-space>2215747861</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
<Iteration>
  <Iteration_iter-num>20</Iteration_iter-num>
  <Iteration_query-ID>Query_20</Iteration_query-ID>
  <Iteration_query-def>PMZ_0055777-RA transcript Note:&quot;Similar to MBNL3 Muscleblind-like protein 3 (Homo sapiens)&quot; offset:62 AED:0.22 eAED:0.22 QI:62|0.2|0.66|1|0.6|0.66|6|276|245</Iteration_query-def>
  <Iteration_query-len>1076</Iteration_query-len>
<Iteration_hits>
</Iteration_hits>
  <Iteration_stat>
    <Statistics>
      <Statistics_db-num>6600</Statistics_db-num>
      <Statistics_db-len>2914067</Statistics_db-len>
      <Statistics_hsp-len>91</Statistics_hsp-len>
      <Statistics_eff-space>617695689</Statistics_eff-space>
      <Statistics_kappa>0.041</Statistics_kappa>
      <Statistics_lambda>0.267</Statistics_lambda>
      <Statistics_entropy>0.14</Statistics_entropy>
    </Statistics>
  </Iteration_stat>
  <Iteration_message>No hits found</Iteration_message>
</Iteration>
</BlastOutput_iterations>
</BlastOutput>

